Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062020 | sp|Q9ZUM2|TOM3_ARATH | 82.918 | 281 | 48 | 0 | 17 | 297 | 23 | 303 | 3.30e-176 | 491 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062020 | A0A072VRG4 | 97.643 | 297 | 7 | 0 | 1 | 297 | 1 | 297 | 0.0 | 590 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0062020 | -0.803863 | 2.845619e-49 | -8.615850e-47 |
| Msa0012780 | Msa0062020 | 0.836626 | 8.382119e-57 | -8.615850e-47 |
| Msa0012820 | Msa0062020 | 0.814923 | 1.203177e-51 | -8.615850e-47 |
| Msa0013050 | Msa0062020 | 0.828522 | 8.577893e-55 | -8.615850e-47 |
| Msa0020630 | Msa0062020 | -0.807597 | 4.677796e-50 | -8.615850e-47 |
| Msa0034560 | Msa0062020 | 0.809165 | 2.165697e-50 | -8.615850e-47 |
| Msa0055280 | Msa0062020 | -0.807920 | 3.993826e-50 | -8.615850e-47 |
| Msa0061590 | Msa0062020 | 0.811729 | 6.052537e-51 | -8.615850e-47 |
| Msa0061600 | Msa0062020 | 0.848176 | 7.240343e-60 | -8.615850e-47 |
| Msa0062020 | Msa0068410 | -0.815237 | 1.024479e-51 | -8.615850e-47 |
| Msa0062020 | Msa0088550 | -0.806501 | 7.978779e-50 | -8.615850e-47 |
| Msa0062020 | Msa0091480 | -0.804128 | 2.506668e-49 | -8.615850e-47 |
| Msa0062020 | Msa0101060 | -0.809114 | 2.220385e-50 | -8.615850e-47 |
| Msa0062020 | Msa0106110 | 0.816249 | 6.095422e-52 | -8.615850e-47 |
| Msa0062020 | Msa0106130 | 0.814457 | 1.525939e-51 | -8.615850e-47 |
| Msa0062020 | Msa0106370 | 0.893675 | 5.037913e-75 | -8.615850e-47 |
| Msa0062020 | Msa0129790 | 0.831038 | 2.093925e-55 | -8.615850e-47 |
| Msa0062020 | Msa0135360 | -0.805753 | 1.146374e-49 | -8.615850e-47 |
| Msa0062020 | Msa0152740 | 0.829315 | 5.515265e-55 | -8.615850e-47 |
| Msa0062020 | Msa0153440 | -0.833000 | 6.856183e-56 | -8.615850e-47 |
| Msa0062020 | Msa0159750 | -0.807260 | 5.512600e-50 | -8.615850e-47 |
| Msa0062020 | Msa0182930 | -0.806998 | 6.266089e-50 | -8.615850e-47 |
| Msa0062020 | Msa0185640 | 0.823810 | 1.133759e-53 | -8.615850e-47 |
| Msa0062020 | Msa0199730 | -0.811468 | 6.896686e-51 | -8.615850e-47 |
| Msa0062020 | Msa0200950 | 0.802754 | 4.828510e-49 | -8.615850e-47 |
| Msa0062020 | Msa0240780 | -0.807481 | 4.948862e-50 | -8.615850e-47 |
| Msa0062020 | Msa0242290 | -0.800599 | 1.336033e-48 | -8.615850e-47 |
| Msa0062020 | Msa0258670 | 0.823229 | 1.549985e-53 | -8.615850e-47 |
| Msa0062020 | Msa0264940 | 0.857372 | 1.707782e-62 | -8.615850e-47 |
| Msa0062020 | Msa0265980 | 0.816066 | 6.695952e-52 | -8.615850e-47 |
| Msa0062020 | Msa0288240 | -0.813898 | 2.027695e-51 | -8.615850e-47 |
| Msa0062020 | Msa0302990 | 0.857185 | 1.938677e-62 | -8.615850e-47 |
| Msa0062020 | Msa0318250 | -0.803939 | 2.743993e-49 | -8.615850e-47 |
| Msa0062020 | Msa0318270 | -0.815493 | 8.986123e-52 | -8.615850e-47 |
| Msa0062020 | Msa0318310 | -0.817667 | 2.927855e-52 | -8.615850e-47 |
| Msa0062020 | Msa0326670 | -0.811774 | 5.916592e-51 | -8.615850e-47 |
| Msa0062020 | Msa0335890 | 0.816175 | 6.333067e-52 | -8.615850e-47 |
| Msa0062020 | Msa0342340 | 0.810634 | 1.045397e-50 | -8.615850e-47 |
| Msa0062020 | Msa0354390 | -0.829485 | 5.015368e-55 | -8.615850e-47 |
| Msa0062020 | Msa0377280 | -0.802204 | 6.269706e-49 | -8.615850e-47 |
| Msa0062020 | Msa0401340 | -0.821280 | 4.390296e-53 | -8.615850e-47 |
| Msa0062020 | Msa0404690 | -0.807085 | 6.004028e-50 | -8.615850e-47 |
| Msa0062020 | Msa0405250 | 0.821812 | 3.308764e-53 | -8.615850e-47 |
| Msa0062020 | Msa0413740 | -0.813174 | 2.925409e-51 | -8.615850e-47 |
| Msa0062020 | Msa0448120 | -0.819514 | 1.116095e-52 | -8.615850e-47 |
| Msa0062020 | Msa0455260 | -0.819511 | 1.117934e-52 | -8.615850e-47 |
| Msa0062020 | Msa0458790 | -0.828145 | 1.057563e-54 | -8.615850e-47 |
| Msa0062020 | Msa0462590 | -0.819867 | 9.266937e-53 | -8.615850e-47 |
| Msa0062020 | Msa0467920 | 0.811915 | 5.512652e-51 | -8.615850e-47 |
| Msa0062020 | Msa0487490 | -0.825891 | 3.660176e-54 | -8.615850e-47 |
| Msa0062020 | Msa0505390 | -0.812556 | 3.994944e-51 | -8.615850e-47 |
| Msa0062020 | Msa0514330 | 0.834172 | 3.494323e-56 | -8.615850e-47 |
| Msa0062020 | Msa0524050 | -0.802600 | 5.194183e-49 | -8.615850e-47 |
| Msa0062020 | Msa0582110 | -0.814527 | 1.472093e-51 | -8.615850e-47 |
| Msa0062020 | Msa0596100 | -0.810585 | 1.071265e-50 | -8.615850e-47 |
| Msa0062020 | Msa0620640 | -0.806426 | 8.273686e-50 | -8.615850e-47 |
| Msa0062020 | Msa0624730 | -0.801719 | 7.886556e-49 | -8.615850e-47 |
| Msa0062020 | Msa0651400 | -0.820222 | 7.686350e-53 | -8.615850e-47 |
| Msa0062020 | Msa0657670 | -0.824257 | 8.904317e-54 | -8.615850e-47 |
| Msa0062020 | Msa0674220 | -0.807463 | 4.993163e-50 | -8.615850e-47 |
| Msa0062020 | Msa0674300 | -0.812672 | 3.768076e-51 | -8.615850e-47 |
| Msa0062020 | Msa0714600 | -0.832038 | 1.187056e-55 | -8.615850e-47 |
| Msa0062020 | Msa0722930 | -0.815529 | 8.825170e-52 | -8.615850e-47 |
| Msa0062020 | Msa0723140 | -0.807324 | 5.342619e-50 | -8.615850e-47 |
| Msa0062020 | Msa0761640 | -0.805193 | 1.502164e-49 | -8.615850e-47 |
| Msa0062020 | Msa0792510 | -0.817208 | 3.715074e-52 | -8.615850e-47 |
| Msa0062020 | Msa0826650 | -0.801418 | 9.087215e-49 | -8.615850e-47 |
| Msa0062020 | Msa0828570 | -0.838633 | 2.560475e-57 | -8.615850e-47 |
| Msa0062020 | Msa0837990 | -0.806965 | 6.367559e-50 | -8.615850e-47 |
| Msa0062020 | Msa0842050 | -0.814172 | 1.763659e-51 | -8.615850e-47 |
| Msa0062020 | Msa0843280 | -0.803809 | 2.919676e-49 | -8.615850e-47 |
| Msa0062020 | Msa0944690 | -0.813968 | 1.956835e-51 | -8.615850e-47 |
| Msa0062020 | Msa0948050 | 0.821687 | 3.536660e-53 | -8.615850e-47 |
| Msa0062020 | Msa0981740 | -0.817380 | 3.397887e-52 | -8.615850e-47 |
| Msa0062020 | Msa0984460 | 0.811041 | 8.535782e-51 | -8.615850e-47 |
| Msa0062020 | Msa1004210 | -0.804106 | 2.532382e-49 | -8.615850e-47 |
| Msa0062020 | Msa1036390 | -0.822129 | 2.793456e-53 | -8.615850e-47 |
| Msa0062020 | Msa1042890 | 0.801803 | 7.578221e-49 | -8.615850e-47 |
| Msa0062020 | Msa1046610 | -0.801865 | 7.359607e-49 | -8.615850e-47 |
| Msa0062020 | Msa1076680 | -0.820835 | 5.558697e-53 | -8.615850e-47 |
| Msa0062020 | Msa1080460 | -0.828091 | 1.090050e-54 | -8.615850e-47 |
| Msa0062020 | Msa1112000 | -0.801347 | 9.398280e-49 | -8.615850e-47 |
| Msa0062020 | Msa1159360 | -0.812494 | 4.121274e-51 | -8.615850e-47 |
| Msa0062020 | Msa1182830 | -0.844009 | 9.858658e-59 | -8.615850e-47 |
| Msa0062020 | Msa1204980 | 0.817621 | 2.999562e-52 | -8.615850e-47 |
| Msa0062020 | Msa1205010 | 0.816469 | 5.441160e-52 | -8.615850e-47 |
| Msa0062020 | Msa1207480 | 0.818559 | 1.840039e-52 | -8.615850e-47 |
| Msa0062020 | Msa1219780 | 0.804366 | 2.236062e-49 | -8.615850e-47 |
| Msa0062020 | Msa1221200 | 0.809476 | 1.857281e-50 | -8.615850e-47 |
| Msa0062020 | Msa1222030 | 0.845642 | 3.575195e-59 | -8.615850e-47 |
| Msa0062020 | Msa1226600 | -0.803364 | 3.611474e-49 | -8.615850e-47 |
| Msa0062020 | Msa1237260 | -0.806063 | 9.864897e-50 | -8.615850e-47 |
| Msa0062020 | Msa1256540 | 0.812052 | 5.145734e-51 | -8.615850e-47 |
| Msa0062020 | Msa1258280 | -0.822891 | 1.858770e-53 | -8.615850e-47 |
| Msa0062020 | Msa1265960 | -0.807383 | 5.191058e-50 | -8.615850e-47 |
| Msa0062020 | Msa1296960 | 0.814768 | 1.302181e-51 | -8.615850e-47 |
| Msa0062020 | Msa1298290 | -0.801877 | 7.317044e-49 | -8.615850e-47 |
| Msa0062020 | Msa1328750 | -0.815483 | 9.032640e-52 | -8.615850e-47 |
| Msa0062020 | Msa1335970 | 0.844737 | 6.282300e-59 | -8.615850e-47 |
| Msa0062020 | Msa1367620 | 0.800074 | 1.709388e-48 | -8.615850e-47 |
| Msa0062020 | Msa1373950 | -0.821972 | 3.037618e-53 | -8.615850e-47 |
| Msa0062020 | Msa1395230 | 0.839303 | 1.717329e-57 | -8.615850e-47 |
| Msa0062020 | Msa1407210 | 0.809885 | 1.516704e-50 | -8.615850e-47 |
| Msa0062020 | Msa1428420 | -0.809145 | 2.186547e-50 | -8.615850e-47 |
| Msa0062020 | Msa1447160 | 0.815845 | 7.503855e-52 | -8.615850e-47 |
| Msa0062020 | Msa1456810 | -0.813012 | 3.174246e-51 | -8.615850e-47 |
| Msa0062020 | Msa1460310 | 0.857684 | 1.380296e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062020 | MtrunA17_Chr1g0162201 | 97.643 | 297 | 7 | 0 | 1 | 297 | 1 | 297 | 0.0 | 590 |
| Msa0062020 | MtrunA17_Chr8g0375261 | 84.321 | 287 | 45 | 0 | 11 | 297 | 8 | 294 | 0.0 | 504 |
| Msa0062020 | MtrunA17_Chr4g0050391 | 58.484 | 277 | 115 | 0 | 21 | 297 | 13 | 289 | 7.47e-121 | 348 |
| Msa0062020 | MtrunA17_Chr2g0288191 | 60.392 | 255 | 101 | 0 | 43 | 297 | 30 | 284 | 2.82e-111 | 323 |
| Msa0062020 | MtrunA17_Chr4g0074691 | 56.884 | 276 | 119 | 0 | 22 | 297 | 3 | 278 | 2.39e-106 | 310 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0062020 | AT2G02180.1 | 82.918 | 281 | 48 | 0 | 17 | 297 | 23 | 303 | 3.35e-177 | 491 |
| Msa0062020 | AT1G14530.2 | 80.496 | 282 | 55 | 0 | 16 | 297 | 12 | 293 | 8.91e-164 | 457 |
| Msa0062020 | AT1G14530.1 | 78.855 | 227 | 48 | 0 | 16 | 242 | 12 | 238 | 1.58e-134 | 381 |
| Msa0062020 | AT4G21790.1 | 57.388 | 291 | 116 | 1 | 7 | 297 | 9 | 291 | 7.70e-124 | 356 |
Find 103 sgRNAs with CRISPR-Local
Find 607 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGTGGTTGATTATTTATT+TGG | 0.166410 | 1_2:+21094121 | Msa0062020:three_prime_UTR |
| CTGTTCCACTGTTCCAATTA+TGG | 0.181189 | 1_2:-21094376 | None:intergenic |
| ATGCACTCCTGGTCTTGTTC+TGG | 0.183134 | 1_2:+21087684 | Msa0062020:CDS |
| CTGTCTAAGGTGTTCTTTGC+AGG | 0.219822 | 1_2:+21090589 | Msa0062020:CDS |
| GGAAATATTACCTTCTTCTT+TGG | 0.262599 | 1_2:+21094002 | Msa0062020:CDS |
| ATGTAATGAGCAACCATAAT+TGG | 0.269656 | 1_2:+21094363 | Msa0062020:three_prime_UTR |
| TGGGAACGATCGACGGAGTT+TGG | 0.282109 | 1_2:-21086005 | None:intergenic |
| GATTGAAAATACCGAGAAAA+AGG | 0.299833 | 1_2:+21094093 | Msa0062020:three_prime_UTR |
| TGGGTAGTCCAACCATATTC+TGG | 0.305600 | 1_2:-21086374 | None:intergenic |
| TGAGAAAATGAAACACCTTC+TGG | 0.307420 | 1_2:-21086394 | None:intergenic |
| CAATTGAGAGTTCCAGAATA+TGG | 0.308572 | 1_2:+21086362 | Msa0062020:CDS |
| TGTTGTGGTTTATGCTGTTC+AGG | 0.311273 | 1_2:+21087905 | Msa0062020:CDS |
| CATCCTTAAGCAGTTGATAT+TGG | 0.315307 | 1_2:+21094514 | Msa0062020:three_prime_UTR |
| GGGAACGATCGACGGAGTTT+GGG | 0.318317 | 1_2:-21086004 | None:intergenic |
| TAGGATGGTCCATCACATTA+AGG | 0.333750 | 1_2:-21093669 | None:intergenic |
| TGCTTTATGACTTTGTCTAA+TGG | 0.336430 | 1_2:+21094315 | Msa0062020:three_prime_UTR |
| TACACCCTCGCCGGCCTTTA+CGG | 0.339761 | 1_2:+21086162 | Msa0062020:CDS |
| TTTCCTTATCAGAAGTGTTA+TGG | 0.345609 | 1_2:+21093532 | Msa0062020:CDS |
| CGTACTAGTCATTCTGTCTA+AGG | 0.350388 | 1_2:+21090576 | Msa0062020:CDS |
| TGCACTCCTGGTCTTGTTCT+GGG | 0.356099 | 1_2:+21087685 | Msa0062020:CDS |
| CAGCTTCTTACGACGCCCTT+TGG | 0.359651 | 1_2:-21091304 | None:intergenic |
| GTTTCTTTGTTTGCTGCCCT+TGG | 0.365159 | 1_2:+21090711 | Msa0062020:CDS |
| CGACGCCCTTTGGATTCAAC+AGG | 0.380572 | 1_2:-21091294 | None:intergenic |
| AGAATTTGTAGTTGCTTGCT+AGG | 0.397965 | 1_2:-21085933 | None:intergenic |
| CTGGGCTGAGATTTATTACC+AGG | 0.402191 | 1_2:+21087703 | Msa0062020:CDS |
| TGGCCAATATCAACTGCTTA+AGG | 0.408360 | 1_2:-21094517 | None:intergenic |
| CGTCGTTTCCGCCATAGCTT+TGG | 0.423002 | 1_2:+21086185 | Msa0062020:CDS |
| GAATTTGTAGTTGCTTGCTA+GGG | 0.430164 | 1_2:-21085932 | None:intergenic |
| GCCCTTGGCTTTCTTCTCTA+CGG | 0.437396 | 1_2:+21090726 | Msa0062020:CDS |
| ACCTCGCCGTCGTCGGTGGC+AGG | 0.438475 | 1_2:+21086042 | Msa0062020:CDS |
| GAGAAAATGAAACACCTTCT+GGG | 0.439545 | 1_2:-21086393 | None:intergenic |
| GAACGACATCGACGATTCTC+CGG | 0.444368 | 1_2:+21086119 | Msa0062020:CDS |
| CTTTACAACATATGCACTCC+TGG | 0.447845 | 1_2:+21087673 | Msa0062020:CDS |
| AAGATGCGGTCTTGCCAAAC+CGG | 0.453837 | 1_2:-21086138 | None:intergenic |
| TGCTAGGGGCTAAGATTGGT+GGG | 0.458604 | 1_2:-21085917 | None:intergenic |
| TTGCTAGGGGCTAAGATTGG+TGG | 0.458865 | 1_2:-21085918 | None:intergenic |
| CGAGGTGTTGTTGGTCATTG+TGG | 0.466760 | 1_2:-21086025 | None:intergenic |
| GTTCCACCAGGTTGAGGAAT+CGG | 0.468815 | 1_2:-21086100 | None:intergenic |
| CGCTTTCCTGTTGAATCCAA+AGG | 0.469858 | 1_2:+21091288 | Msa0062020:CDS |
| TGCTTGCTAGGGGCTAAGAT+TGG | 0.471082 | 1_2:-21085921 | None:intergenic |
| ACATTAATTGTATAGAAACT+TGG | 0.472412 | 1_2:-21087885 | None:intergenic |
| TCACCATAACACTTCTGATA+AGG | 0.473201 | 1_2:-21093535 | None:intergenic |
| ACATCGACGATTCTCCGGTT+TGG | 0.476060 | 1_2:+21086124 | Msa0062020:CDS |
| TTATGACTTTGTCTAATGGT+TGG | 0.479013 | 1_2:+21094319 | Msa0062020:three_prime_UTR |
| CGACGACGGCGAGGTGTTGT+TGG | 0.480978 | 1_2:-21086034 | None:intergenic |
| GCACATCAAGTAAGATATGT+TGG | 0.497834 | 1_2:-21087637 | None:intergenic |
| TGTATGTGCACGTGTATGAA+TGG | 0.500483 | 1_2:-21085883 | None:intergenic |
| GAGTGACAAAGCTTGTATCA+TGG | 0.503399 | 1_2:+21094205 | Msa0062020:three_prime_UTR |
| GCTTTCTTCTCTACGGTGGA+AGG | 0.504569 | 1_2:+21090733 | Msa0062020:CDS |
| TAATATATGAAGTTTAGAAT+AGG | 0.508408 | 1_2:-21093688 | None:intergenic |
| TTTCTATACAATTAATGTTG+TGG | 0.510519 | 1_2:+21087890 | Msa0062020:CDS |
| TGGCGGAAACGACGCCGTAA+AGG | 0.516515 | 1_2:-21086176 | None:intergenic |
| TGAGAGTTCCAGAATATGGT+TGG | 0.518623 | 1_2:+21086366 | Msa0062020:CDS |
| AGTGACAAAGCTTGTATCAT+GGG | 0.518687 | 1_2:+21094206 | Msa0062020:three_prime_UTR |
| GAGGTGTTGTTGGTCATTGT+GGG | 0.519647 | 1_2:-21086024 | None:intergenic |
| ATCGTCGATGTCGTTCCACC+AGG | 0.520262 | 1_2:-21086112 | None:intergenic |
| ATGAATAAGACCAAAGAAGA+AGG | 0.523019 | 1_2:-21094012 | None:intergenic |
| GGAAACGACGCCGTAAAGGC+CGG | 0.530370 | 1_2:-21086172 | None:intergenic |
| GCTTTCCTGTTGAATCCAAA+GGG | 0.544156 | 1_2:+21091289 | Msa0062020:CDS |
| TGGCTGATTCTCATAGTCCA+AGG | 0.544934 | 1_2:+21094141 | Msa0062020:three_prime_UTR |
| AAACGCAAACCTTAATGTGA+TGG | 0.549598 | 1_2:+21093660 | Msa0062020:CDS |
| GGAGTTTGGGGCACACGCGC+CGG | 0.551917 | 1_2:-21085991 | None:intergenic |
| GCCGTCGTCGGTGGCAGGCG+CGG | 0.553220 | 1_2:+21086047 | Msa0062020:CDS |
| GCACGTGCTGTATCCACTGA+TGG | 0.558795 | 1_2:+21087855 | Msa0062020:CDS |
| TATTGTGTGATACCACGCTT+TGG | 0.559304 | 1_2:-21094051 | None:intergenic |
| GTCATTGTGGGAACGATCGA+CGG | 0.562849 | 1_2:-21086012 | None:intergenic |
| GATGTCGTTCCACCAGGTTG+AGG | 0.564379 | 1_2:-21086106 | None:intergenic |
| GGCAGGCGCGGTGGTGAACG+CGG | 0.564721 | 1_2:+21086059 | Msa0062020:CDS |
| ATGGGAAGGTACCAAAGCTA+TGG | 0.578903 | 1_2:-21086196 | None:intergenic |
| CGACGCCGTAAAGGCCGGCG+AGG | 0.579591 | 1_2:-21086167 | None:intergenic |
| GGCTGATTCTCATAGTCCAA+GGG | 0.583266 | 1_2:+21094142 | Msa0062020:three_prime_UTR |
| ACCGCGCCTGCCACCGACGA+CGG | 0.584430 | 1_2:-21086048 | None:intergenic |
| GTTTGGGGCACACGCGCCGG+TGG | 0.585408 | 1_2:-21085988 | None:intergenic |
| TCTAAACTTCATATATTACC+TGG | 0.590927 | 1_2:+21093693 | Msa0062020:CDS |
| TGTGTGATACCACGCTTTGG+TGG | 0.591434 | 1_2:-21094048 | None:intergenic |
| AACTCACCGATTCCTCAACC+TGG | 0.591877 | 1_2:+21086094 | Msa0062020:CDS |
| CTTGGCTTTCTTCTCTACGG+TGG | 0.595848 | 1_2:+21090729 | Msa0062020:CDS |
| GTATGTGCACGTGTATGAAT+GGG | 0.597959 | 1_2:-21085882 | None:intergenic |
| ACCGTAGAGAAGAAAGCCAA+GGG | 0.603119 | 1_2:-21090727 | None:intergenic |
| CAACAACACCTCGCCGTCGT+CGG | 0.607297 | 1_2:+21086035 | Msa0062020:CDS |
| CAACACCTCGCCGTCGTCGG+TGG | 0.609458 | 1_2:+21086038 | Msa0062020:CDS |
| GACGCCGTAAAGGCCGGCGA+GGG | 0.609478 | 1_2:-21086166 | None:intergenic |
| CACCGTAGAGAAGAAAGCCA+AGG | 0.609487 | 1_2:-21090728 | None:intergenic |
| ACTTGGCTTCAGTCCATCAG+TGG | 0.611275 | 1_2:-21087868 | None:intergenic |
| AGCAACCATAATTGGAACAG+TGG | 0.616569 | 1_2:+21094371 | Msa0062020:three_prime_UTR |
| AATTTGTAGTTGCTTGCTAG+GGG | 0.616727 | 1_2:-21085931 | None:intergenic |
| GTTGTAAAGAAAGCAAGACT+TGG | 0.617097 | 1_2:-21087659 | None:intergenic |
| GTCGTCGGTGGCAGGCGCGG+TGG | 0.617258 | 1_2:+21086050 | Msa0062020:CDS |
| AGAATGACTAGTACGCTGAC+TGG | 0.622590 | 1_2:-21090568 | None:intergenic |
| CGCATCTTCTACACCCTCGC+CGG | 0.632929 | 1_2:+21086153 | Msa0062020:CDS |
| TCTCAGCCCAGAACAAGACC+AGG | 0.637637 | 1_2:-21087691 | None:intergenic |
| AGGAAGCTTCCACCAAAGCG+TGG | 0.641984 | 1_2:+21094039 | Msa0062020:CDS |
| GGAAGGTACCAAAGCTATGG+CGG | 0.644462 | 1_2:-21086193 | None:intergenic |
| GGAACGATCGACGGAGTTTG+GGG | 0.648473 | 1_2:-21086003 | None:intergenic |
| ATATGAAGTTTAGAATAGGA+TGG | 0.649295 | 1_2:-21093684 | None:intergenic |
| GCCTGCCACCGACGACGGCG+AGG | 0.649888 | 1_2:-21086043 | None:intergenic |
| AGGCGCGGTGGTGAACGCGG+TGG | 0.650350 | 1_2:+21086062 | Msa0062020:CDS |
| CGGCGAGGGTGTAGAAGATG+CGG | 0.656168 | 1_2:-21086152 | None:intergenic |
| ATATGGTTGGACTACCCAGA+AGG | 0.660843 | 1_2:+21086379 | Msa0062020:CDS |
| TCTTCTTTCGGAATGTACAG+AGG | 0.665668 | 1_2:+21086574 | Msa0062020:CDS |
| GCGTCGTAAGAAGCTGCAAG+AGG | 0.671751 | 1_2:+21091311 | Msa0062020:CDS |
| TGTACAGAGGTTACAGCCAG+AGG | 0.691850 | 1_2:+21086587 | Msa0062020:CDS |
| TCACCGATTCCTCAACCTGG+TGG | 0.693137 | 1_2:+21086097 | Msa0062020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAATATTTTCCAATTT+AGG | + | chr1_2:21086278-21086297 | Msa0062020:intron | 10.0% |
| !!! | TTTAAATATTTTCCAATTTA+GGG | + | chr1_2:21086279-21086298 | Msa0062020:intron | 10.0% |
| !! | TGTTAAAAATTTGAAAAATA+TGG | + | chr1_2:21088455-21088474 | Msa0062020:intron | 10.0% |
| !!! | ATTTTGTTTTTATAAAAAAG+GGG | - | chr1_2:21088890-21088909 | None:intergenic | 10.0% |
| !!! | GATTTTGTTTTTATAAAAAA+GGG | - | chr1_2:21088891-21088910 | None:intergenic | 10.0% |
| !!! | TGATTTTGTTTTTATAAAAA+AGG | - | chr1_2:21088892-21088911 | None:intergenic | 10.0% |
| !! | AATAAAAACAAAAAAAAGAT+TGG | - | chr1_2:21090502-21090521 | None:intergenic | 10.0% |
| !! | ATCAAAAATTGAAAAATTTA+AGG | + | chr1_2:21091124-21091143 | Msa0062020:intron | 10.0% |
| !! | TAATGATGTTAATATATATT+GGG | - | chr1_2:21092476-21092495 | None:intergenic | 10.0% |
| !! | TTAATGATGTTAATATATAT+TGG | - | chr1_2:21092477-21092496 | None:intergenic | 10.0% |
| !! | ATTAGAGATATATTAATATT+TGG | - | chr1_2:21092853-21092872 | None:intergenic | 10.0% |
| !!! | ATTTTGATTTAAAAATAGAA+GGG | - | chr1_2:21093563-21093582 | None:intergenic | 10.0% |
| !!! | AATTTTGATTTAAAAATAGA+AGG | - | chr1_2:21093564-21093583 | None:intergenic | 10.0% |
| !! | TTTAAAAAAAAAAAAACCAC+CGG | + | chr1_2:21085972-21085991 | Msa0062020:five_prime_UTR | 15.0% |
| !! | TGATATATGATGAAATATTA+TGG | + | chr1_2:21087307-21087326 | Msa0062020:intron | 15.0% |
| !!! | TGTTGTATATGATTTTTATT+AGG | + | chr1_2:21087382-21087401 | Msa0062020:intron | 15.0% |
| !! | AAAAAATAATGACTGTAATA+TGG | - | chr1_2:21088504-21088523 | None:intergenic | 15.0% |
| !!! | TTTTGTTTTTATAAAAAAGG+GGG | - | chr1_2:21088889-21088908 | None:intergenic | 15.0% |
| !!! | TTTCTTTTCTTTTTTTTTGT+TGG | + | chr1_2:21090764-21090783 | Msa0062020:intron | 15.0% |
| !!! | CTTTTTTAATTTTCATGATT+TGG | - | chr1_2:21091663-21091682 | None:intergenic | 15.0% |
| !! | AAAATAATAGTAGTAATGTA+TGG | + | chr1_2:21091913-21091932 | Msa0062020:intron | 15.0% |
| !! | AATTAAAATTATGAGTTGTT+AGG | - | chr1_2:21092231-21092250 | None:intergenic | 15.0% |
| !! | TAAGAGTAATTAAGATTAAT+AGG | - | chr1_2:21092328-21092347 | None:intergenic | 15.0% |
| !! | TAACTTAAGAATTCAAAAAA+AGG | - | chr1_2:21092447-21092466 | None:intergenic | 15.0% |
| !! | TCTCTAATAAAGTAATTATT+TGG | + | chr1_2:21092865-21092884 | Msa0062020:intron | 15.0% |
| !! | CTCTAATAAAGTAATTATTT+GGG | + | chr1_2:21092866-21092885 | Msa0062020:intron | 15.0% |
| !!! | TTTTGATTTAAAAATAGAAG+GGG | - | chr1_2:21093562-21093581 | None:intergenic | 15.0% |
| !!! | TAATATATGAAGTTTAGAAT+AGG | - | chr1_2:21093691-21093710 | None:intergenic | 15.0% |
| !!! | GCTGTTTAATTAATTTTTTT+TGG | + | chr1_2:21093767-21093786 | Msa0062020:intron | 15.0% |
| !!! | TTAATTTTTTTTGGTAAGAT+TGG | + | chr1_2:21093776-21093795 | Msa0062020:intron | 15.0% |
| !! | AAGTAAATAAAACCCTAAAT+TGG | - | chr1_2:21086294-21086313 | None:intergenic | 20.0% |
| !!! | TTAGTGATATGTAAACTTTT+TGG | + | chr1_2:21086525-21086544 | Msa0062020:intron | 20.0% |
| !! | TGATGATTACAATTGATTAA+CGG | - | chr1_2:21087444-21087463 | None:intergenic | 20.0% |
| !!! | TATTCTTATTTGTAAAGAAC+AGG | + | chr1_2:21087552-21087571 | Msa0062020:intron | 20.0% |
| !!! | ATTCTTATTTGTAAAGAACA+GGG | + | chr1_2:21087553-21087572 | Msa0062020:intron | 20.0% |
| !! | ACATTAATTGTATAGAAACT+TGG | - | chr1_2:21087888-21087907 | None:intergenic | 20.0% |
| !! | TTTCTATACAATTAATGTTG+TGG | + | chr1_2:21087890-21087909 | Msa0062020:CDS | 20.0% |
| !! | GATTATATTACAATAGCTTA+AGG | - | chr1_2:21088130-21088149 | None:intergenic | 20.0% |
| !! | TATTTCAACATAGTAATGAT+CGG | + | chr1_2:21088796-21088815 | Msa0062020:intron | 20.0% |
| !!! | TTTGTTTTTATAAAAAAGGG+GGG | - | chr1_2:21088888-21088907 | None:intergenic | 20.0% |
| !!! | GAACATTTAACTTTTATGTA+GGG | - | chr1_2:21089360-21089379 | None:intergenic | 20.0% |
| !!! | ACTTAGATAAAAGTTCTAAA+CGG | + | chr1_2:21089481-21089500 | Msa0062020:intron | 20.0% |
| !!! | AATATACTGTTTTCAAACTA+TGG | + | chr1_2:21089539-21089558 | Msa0062020:intron | 20.0% |
| !! | TGATAAATTGAAAGAAGTAA+AGG | - | chr1_2:21090640-21090659 | None:intergenic | 20.0% |
| !!! | TCAATTTATCAAGACTTTTA+CGG | + | chr1_2:21090649-21090668 | Msa0062020:intron | 20.0% |
| !!! | TTTAATTTTCATGATTTGGT+TGG | - | chr1_2:21091659-21091678 | None:intergenic | 20.0% |
| !! | AAAACATTTAGTAAAAGAGA+AGG | - | chr1_2:21091803-21091822 | None:intergenic | 20.0% |
| !!! | TGAATTTTGAGTAATGTTTA+AGG | + | chr1_2:21091952-21091971 | Msa0062020:intron | 20.0% |
| !!! | AGTAGTTCTATTATATTAGT+GGG | - | chr1_2:21092165-21092184 | None:intergenic | 20.0% |
| !!! | TAGTAGTTCTATTATATTAG+TGG | - | chr1_2:21092166-21092185 | None:intergenic | 20.0% |
| !! | AATGTAACTAGAAAAAAAAG+AGG | + | chr1_2:21092566-21092585 | Msa0062020:intron | 20.0% |
| !!! | AAATCAAAATTGATTCCTAT+TGG | + | chr1_2:21093573-21093592 | Msa0062020:intron | 20.0% |
| !! | GTTTCATTTTCTCAATTTTG+TGG | + | chr1_2:21086403-21086422 | Msa0062020:CDS | 25.0% |
| !!! | GTTTAGTTTTCATCTTCTTT+CGG | + | chr1_2:21086562-21086581 | Msa0062020:CDS | 25.0% |
| ! | AAAATTTCCTTAAGCTTATG+CGG | - | chr1_2:21086744-21086763 | None:intergenic | 25.0% |
| ! | AGACATGATATAATTAGACA+TGG | + | chr1_2:21087072-21087091 | Msa0062020:intron | 25.0% |
| !! | TCTACCATATTTTCTACAAA+AGG | - | chr1_2:21087126-21087145 | None:intergenic | 25.0% |
| !! | AAGGAGAGTATATCAAATTA+AGG | + | chr1_2:21087191-21087210 | Msa0062020:intron | 25.0% |
| !! | AGGAGAGTATATCAAATTAA+GGG | + | chr1_2:21087192-21087211 | Msa0062020:intron | 25.0% |
| !!! | TTTTGTAGTTTGGTTTTGAT+GGG | + | chr1_2:21087798-21087817 | Msa0062020:intron | 25.0% |
| !!! | GTTTTACCTTTTTAAGATCA+TGG | + | chr1_2:21087956-21087975 | Msa0062020:intron | 25.0% |
| ! | TATTACTACAATCAAACTTC+TGG | + | chr1_2:21088039-21088058 | Msa0062020:intron | 25.0% |
| ! | TTCTGGACAATATAATTTGA+TGG | + | chr1_2:21088056-21088075 | Msa0062020:intron | 25.0% |
| !! | CAAATGTCAAGTGAAAATTT+TGG | + | chr1_2:21088149-21088168 | Msa0062020:intron | 25.0% |
| !! | TTTGGAGCGTTTATAAAATT+TGG | + | chr1_2:21088167-21088186 | Msa0062020:intron | 25.0% |
| ! | TTTCCATGAATCAATGATTA+CGG | + | chr1_2:21088260-21088279 | Msa0062020:intron | 25.0% |
| ! | ACGGATAATATTATTTCACA+TGG | + | chr1_2:21088279-21088298 | Msa0062020:intron | 25.0% |
| ! | ACAATTCAGTAAAATGAGAA+TGG | - | chr1_2:21088307-21088326 | None:intergenic | 25.0% |
| !! | ATTCTCATTTTACTGAATTG+TGG | + | chr1_2:21088306-21088325 | Msa0062020:intron | 25.0% |
| !! | TTCTCATTTTACTGAATTGT+GGG | + | chr1_2:21088307-21088326 | Msa0062020:intron | 25.0% |
| !!! | TAGAAAATCACTTTTTCCTT+GGG | - | chr1_2:21088529-21088548 | None:intergenic | 25.0% |
| !!! | TTAGAAAATCACTTTTTCCT+TGG | - | chr1_2:21088530-21088549 | None:intergenic | 25.0% |
| !!! | TTATTTTTTGACAACTGCTA+TGG | + | chr1_2:21088607-21088626 | Msa0062020:intron | 25.0% |
| ! | TTTCGATAGAAAAGATGTTA+TGG | - | chr1_2:21088709-21088728 | None:intergenic | 25.0% |
| !!! | TTGTTTTTATAAAAAAGGGG+GGG | - | chr1_2:21088887-21088906 | None:intergenic | 25.0% |
| ! | AGTGCTAGAATTTAATCAAA+AGG | - | chr1_2:21088947-21088966 | None:intergenic | 25.0% |
| ! | ATATTGCCACTAGTTAAATT+TGG | + | chr1_2:21088987-21089006 | Msa0062020:intron | 25.0% |
| !!! | GGAACATTTAACTTTTATGT+AGG | - | chr1_2:21089361-21089380 | None:intergenic | 25.0% |
| !! | ATTTTTGTAATAGATGCTAG+AGG | - | chr1_2:21089389-21089408 | None:intergenic | 25.0% |
| !!! | CTTAGATAAAAGTTCTAAAC+GGG | + | chr1_2:21089482-21089501 | Msa0062020:intron | 25.0% |
| ! | AAAGTTACTTAGAAACATCT+GGG | + | chr1_2:21089710-21089729 | Msa0062020:intron | 25.0% |
| !!! | ATATTTGTTTTCAAGAAACC+AGG | + | chr1_2:21089918-21089937 | Msa0062020:intron | 25.0% |
| !! | ATCCTGATTTTCTAATTAAC+TGG | - | chr1_2:21090191-21090210 | None:intergenic | 25.0% |
| !! | GATGGACTTATTGAATATTA+CGG | - | chr1_2:21090335-21090354 | None:intergenic | 25.0% |
| ! | TAGTTATGATAGACAAAAGA+TGG | - | chr1_2:21090353-21090372 | None:intergenic | 25.0% |
| ! | AATATTGAAATCAGAACCAA+TGG | - | chr1_2:21090419-21090438 | None:intergenic | 25.0% |
| !!! | TCATTTTGTGGTTGATATTA+TGG | + | chr1_2:21090539-21090558 | Msa0062020:CDS | 25.0% |
| !! | CAATTTATCAAGACTTTTAC+GGG | + | chr1_2:21090650-21090669 | Msa0062020:intron | 25.0% |
| ! | TTCATTCCAAATTACATCAA+GGG | - | chr1_2:21090801-21090820 | None:intergenic | 25.0% |
| ! | TTTCATTCCAAATTACATCA+AGG | - | chr1_2:21090802-21090821 | None:intergenic | 25.0% |
| !! | TTTTTCTCATGGTTTCTTAA+AGG | + | chr1_2:21090968-21090987 | Msa0062020:intron | 25.0% |
| !! | TTTTCTCATGGTTTCTTAAA+GGG | + | chr1_2:21090969-21090988 | Msa0062020:intron | 25.0% |
| ! | GAGAAGATAATAGAAAAAGA+AGG | - | chr1_2:21091088-21091107 | None:intergenic | 25.0% |
| !!! | CATTGTTTTATAGTAGAGAT+TGG | + | chr1_2:21091744-21091763 | Msa0062020:intron | 25.0% |
| ! | TCTATTATATTAGTGGGATT+GGG | - | chr1_2:21092159-21092178 | None:intergenic | 25.0% |
| ! | TTCTATTATATTAGTGGGAT+TGG | - | chr1_2:21092160-21092179 | None:intergenic | 25.0% |
| ! | AATATAAACATGTCAGATGA+GGG | - | chr1_2:21092264-21092283 | None:intergenic | 25.0% |
| !!! | CCTATTTCGTTTTGAAATTA+AGG | - | chr1_2:21092504-21092523 | None:intergenic | 25.0% |
| ! | CCTTAATTTCAAAACGAAAT+AGG | + | chr1_2:21092501-21092520 | Msa0062020:intron | 25.0% |
| !!! | TTATTTGGGTAAGAGTTTTT+TGG | + | chr1_2:21092880-21092899 | Msa0062020:intron | 25.0% |
| ! | TGATAATTAAGAGCTATTAG+TGG | + | chr1_2:21092907-21092926 | Msa0062020:intron | 25.0% |
| ! | GATAATTAAGAGCTATTAGT+GGG | + | chr1_2:21092908-21092927 | Msa0062020:intron | 25.0% |
| ! | ATAATTAAGAGCTATTAGTG+GGG | + | chr1_2:21092909-21092928 | Msa0062020:intron | 25.0% |
| ! | AATTCCTATAACCTAAACAT+GGG | - | chr1_2:21093337-21093356 | None:intergenic | 25.0% |
| ! | TAATTCCTATAACCTAAACA+TGG | - | chr1_2:21093338-21093357 | None:intergenic | 25.0% |
| ! | TAGGAATTATCTAGAGATAA+AGG | + | chr1_2:21093349-21093368 | Msa0062020:intron | 25.0% |
| !! | AATAAGTGATGTTTCTTTTC+AGG | + | chr1_2:21093478-21093497 | Msa0062020:intron | 25.0% |
| ! | CAATTTAAAAACCAACCAAT+AGG | - | chr1_2:21093591-21093610 | None:intergenic | 25.0% |
| !! | ATATGAAGTTTAGAATAGGA+TGG | - | chr1_2:21093687-21093706 | None:intergenic | 25.0% |
| ! | TCTAAACTTCATATATTACC+TGG | + | chr1_2:21093693-21093712 | Msa0062020:CDS | 25.0% |
| !!! | TTTTTTTGTGTTCTCAATTG+TGG | + | chr1_2:21093721-21093740 | Msa0062020:intron | 25.0% |
| ! | TCAGTGGTTGATTATTTATT+TGG | + | chr1_2:21094121-21094140 | Msa0062020:three_prime_UTR | 25.0% |
| ! | TCTGTTATAAAAATTACCCT+TGG | - | chr1_2:21094161-21094180 | None:intergenic | 25.0% |
| !! | GAGAAAGTTAATCTTTTCTA+TGG | + | chr1_2:21094179-21094198 | Msa0062020:three_prime_UTR | 25.0% |
| !! | AAGTTAATCTTTTCTATGGT+TGG | + | chr1_2:21094183-21094202 | Msa0062020:three_prime_UTR | 25.0% |
| !!! | ATGGGTTTTATAGTTCATTA+AGG | + | chr1_2:21094224-21094243 | Msa0062020:three_prime_UTR | 25.0% |
| TATATCACATAAAACCCCAT+CGG | - | chr1_2:21086715-21086734 | None:intergenic | 30.0% | |
| TTTATCGTAGAACCTTAAGA+TGG | + | chr1_2:21086762-21086781 | Msa0062020:intron | 30.0% | |
| TTATCGTAGAACCTTAAGAT+GGG | + | chr1_2:21086763-21086782 | Msa0062020:intron | 30.0% | |
| AGCATATCACAAAACATTAG+CGG | - | chr1_2:21086934-21086953 | None:intergenic | 30.0% | |
| TAGTACAATGTGTTGTCAAA+TGG | + | chr1_2:21086957-21086976 | Msa0062020:intron | 30.0% | |
| ! | ACCACCTTTTGTAGAAAATA+TGG | + | chr1_2:21087119-21087138 | Msa0062020:intron | 30.0% |
| ! | ACCATATTTTCTACAAAAGG+TGG | - | chr1_2:21087123-21087142 | None:intergenic | 30.0% |
| AATATGGTAGAAACATAGCT+TGG | + | chr1_2:21087135-21087154 | Msa0062020:intron | 30.0% | |
| ATATGGTAGAAACATAGCTT+GGG | + | chr1_2:21087136-21087155 | Msa0062020:intron | 30.0% | |
| AGATCTCAAGATTAATGAGT+TGG | + | chr1_2:21087275-21087294 | Msa0062020:intron | 30.0% | |
| GTAAAGAACAGGGTTTAATA+TGG | + | chr1_2:21087563-21087582 | Msa0062020:intron | 30.0% | |
| GATTTATTACCAGGTAAGTT+TGG | + | chr1_2:21087712-21087731 | Msa0062020:intron | 30.0% | |
| ! | TCTGTTTTCTTCTTTTGTCT+TGG | + | chr1_2:21087771-21087790 | Msa0062020:intron | 30.0% |
| !!! | GTTTTGTAGTTTGGTTTTGA+TGG | + | chr1_2:21087797-21087816 | Msa0062020:intron | 30.0% |
| CAACATCCATGATCTTAAAA+AGG | - | chr1_2:21087965-21087984 | None:intergenic | 30.0% | |
| AGCATGTCTAGTAATATGTT+CGG | + | chr1_2:21088084-21088103 | Msa0062020:intron | 30.0% | |
| TGGATTGATATGGAATAGTT+TGG | + | chr1_2:21088214-21088233 | Msa0062020:intron | 30.0% | |
| !! | TATCCGTAATCATTGATTCA+TGG | - | chr1_2:21088266-21088285 | None:intergenic | 30.0% |
| ! | TCTCATTTTACTGAATTGTG+GGG | + | chr1_2:21088308-21088327 | Msa0062020:intron | 30.0% |
| CAATAATTAAAACCTTGCTG+AGG | + | chr1_2:21088345-21088364 | Msa0062020:intron | 30.0% | |
| GTAATGTTAGAATCCTCAAA+TGG | - | chr1_2:21088432-21088451 | None:intergenic | 30.0% | |
| TATGGACATGAAGAGTTTAA+AGG | - | chr1_2:21088486-21088505 | None:intergenic | 30.0% | |
| !!! | AGTCATTATTTTTTGTCCCA+AGG | + | chr1_2:21088510-21088529 | Msa0062020:intron | 30.0% |
| TCTAAACAAAGATCTTACAC+TGG | + | chr1_2:21088545-21088564 | Msa0062020:intron | 30.0% | |
| TAGAAAAGATGTTATGGTTG+TGG | - | chr1_2:21088703-21088722 | None:intergenic | 30.0% | |
| ATCTAGCCAAATTTAACTAG+TGG | - | chr1_2:21088996-21089015 | None:intergenic | 30.0% | |
| AAGATAAAGTGACAACATAC+AGG | - | chr1_2:21089156-21089175 | None:intergenic | 30.0% | |
| !! | GTATGTTGTCACTTTATCTT+TGG | + | chr1_2:21089156-21089175 | Msa0062020:intron | 30.0% |
| ! | AAGTTTCACGTGTTTAGTTT+GGG | - | chr1_2:21089454-21089473 | None:intergenic | 30.0% |
| TAAGTTTCACGTGTTTAGTT+TGG | - | chr1_2:21089455-21089474 | None:intergenic | 30.0% | |
| GAAAGTTACTTAGAAACATC+TGG | + | chr1_2:21089709-21089728 | Msa0062020:intron | 30.0% | |
| AGAAGTTTAATCCTAAGAGA+GGG | + | chr1_2:21089784-21089803 | Msa0062020:intron | 30.0% | |
| ! | TCACTAAGCCTATTAATTTG+TGG | - | chr1_2:21089831-21089850 | None:intergenic | 30.0% |
| TGCCAGTTAATTAGAAAATC+AGG | + | chr1_2:21090186-21090205 | Msa0062020:intron | 30.0% | |
| TTAAAGATATCAAATCTGCG+CGG | + | chr1_2:21090254-21090273 | Msa0062020:intron | 30.0% | |
| ! | AGGACATAACTGATAATGAT+AGG | - | chr1_2:21090282-21090301 | None:intergenic | 30.0% |
| TTTATACAGACATCATGTGT+TGG | - | chr1_2:21090380-21090399 | None:intergenic | 30.0% | |
| ! | ATGTATGTCAGATCATTTTG+TGG | + | chr1_2:21090527-21090546 | Msa0062020:intron | 30.0% |
| !! | TTTTGTGGTTGATATTATGG+TGG | + | chr1_2:21090542-21090561 | Msa0062020:CDS | 30.0% |
| TCATTCCAAATTACATCAAG+GGG | - | chr1_2:21090800-21090819 | None:intergenic | 30.0% | |
| GAATGAAACTTATTGCATCT+AGG | + | chr1_2:21090814-21090833 | Msa0062020:intron | 30.0% | |
| CAAGATACCAATCACATATT+AGG | + | chr1_2:21090840-21090859 | Msa0062020:intron | 30.0% | |
| TCCTTGGAAGTTTATTTGTT+AGG | + | chr1_2:21090873-21090892 | Msa0062020:intron | 30.0% | |
| ! | CCTTGGAAGTTTATTTGTTA+GGG | + | chr1_2:21090874-21090893 | Msa0062020:intron | 30.0% |
| ATCAGTGATACTACAAAAGT+GGG | - | chr1_2:21091227-21091246 | None:intergenic | 30.0% | |
| AATCAGTGATACTACAAAAG+TGG | - | chr1_2:21091228-21091247 | None:intergenic | 30.0% | |
| ! | CATCTTTTTGCTTCTATTTC+TGG | - | chr1_2:21091523-21091542 | None:intergenic | 30.0% |
| CAGAAATAGAAGCAAAAAGA+TGG | + | chr1_2:21091521-21091540 | Msa0062020:intron | 30.0% | |
| GTACAGAAAAAACAAAGAAG+AGG | + | chr1_2:21091633-21091652 | Msa0062020:intron | 30.0% | |
| ! | GTTTTATAGTAGAGATTGGA+TGG | + | chr1_2:21091748-21091767 | Msa0062020:intron | 30.0% |
| CTTAGGTCATTTAACAGATT+GGG | + | chr1_2:21091777-21091796 | Msa0062020:intron | 30.0% | |
| GAATATAAACATGTCAGATG+AGG | - | chr1_2:21092265-21092284 | None:intergenic | 30.0% | |
| ! | TGCATTGTATTTGGATTTTG+AGG | - | chr1_2:21092382-21092401 | None:intergenic | 30.0% |
| ! | GTGGATTTTTGCATTGTATT+TGG | - | chr1_2:21092391-21092410 | None:intergenic | 30.0% |
| TATTTGTATACTACAAGCTG+TGG | - | chr1_2:21092410-21092429 | None:intergenic | 30.0% | |
| ATATCAGGTGTCTATTATTC+TGG | - | chr1_2:21092618-21092637 | None:intergenic | 30.0% | |
| ATAATAGACACCTGATATTG+TGG | + | chr1_2:21092620-21092639 | Msa0062020:intron | 30.0% | |
| ATTTCACCAGTTTCCTTATA+GGG | - | chr1_2:21092973-21092992 | None:intergenic | 30.0% | |
| !!! | TCGTGTTTTTGGTATATTAG+CGG | + | chr1_2:21093150-21093169 | Msa0062020:intron | 30.0% |
| CGTTAAGATCTTTGTAATTG+AGG | + | chr1_2:21093176-21093195 | Msa0062020:intron | 30.0% | |
| GAATTATCTAGAGATAAAGG+AGG | + | chr1_2:21093352-21093371 | Msa0062020:intron | 30.0% | |
| AGAATGGTCACTTCAAATAA+TGG | + | chr1_2:21093401-21093420 | Msa0062020:intron | 30.0% | |
| !! | TTTCCTTATCAGAAGTGTTA+TGG | + | chr1_2:21093532-21093551 | Msa0062020:CDS | 30.0% |
| ! | CAAAATTGATTCCTATTGGT+TGG | + | chr1_2:21093577-21093596 | Msa0062020:intron | 30.0% |
| ACTTCATATATTACCTGGTA+AGG | + | chr1_2:21093698-21093717 | Msa0062020:intron | 30.0% | |
| GGAAATATTACCTTCTTCTT+TGG | + | chr1_2:21094002-21094021 | Msa0062020:CDS | 30.0% | |
| ATGAATAAGACCAAAGAAGA+AGG | - | chr1_2:21094015-21094034 | None:intergenic | 30.0% | |
| !!! | CTTTGGTCTTATTCATTTTG+AGG | + | chr1_2:21094019-21094038 | Msa0062020:CDS | 30.0% |
| ! | TTTCAATCTTTTCAGCGAAT+CGG | - | chr1_2:21094081-21094100 | None:intergenic | 30.0% |
| GATTGAAAATACCGAGAAAA+AGG | + | chr1_2:21094093-21094112 | Msa0062020:three_prime_UTR | 30.0% | |
| TGCTTTATGACTTTGTCTAA+TGG | + | chr1_2:21094315-21094334 | Msa0062020:three_prime_UTR | 30.0% | |
| TTATGACTTTGTCTAATGGT+TGG | + | chr1_2:21094319-21094338 | Msa0062020:three_prime_UTR | 30.0% | |
| ATGTAATGAGCAACCATAAT+TGG | + | chr1_2:21094363-21094382 | Msa0062020:three_prime_UTR | 30.0% | |
| ! | AATTTGTAGTTGCTTGCTAG+GGG | - | chr1_2:21085934-21085953 | None:intergenic | 35.0% |
| ! | GAATTTGTAGTTGCTTGCTA+GGG | - | chr1_2:21085935-21085954 | None:intergenic | 35.0% |
| AGAATTTGTAGTTGCTTGCT+AGG | - | chr1_2:21085936-21085955 | None:intergenic | 35.0% | |
| TAAGATTGAATAGGATGGGA+AGG | - | chr1_2:21086213-21086232 | None:intergenic | 35.0% | |
| TTCCCATCCTATTCAATCTT+AGG | + | chr1_2:21086212-21086231 | Msa0062020:intron | 35.0% | |
| TCCCATCCTATTCAATCTTA+GGG | + | chr1_2:21086213-21086232 | Msa0062020:intron | 35.0% | |
| ACCCTAAGATTGAATAGGAT+GGG | - | chr1_2:21086217-21086236 | None:intergenic | 35.0% | |
| AACCCTAAGATTGAATAGGA+TGG | - | chr1_2:21086218-21086237 | None:intergenic | 35.0% | |
| GAAGAACCCTAAGATTGAAT+AGG | - | chr1_2:21086222-21086241 | None:intergenic | 35.0% | |
| AAATAACGAGCGAATGCATA+GGG | - | chr1_2:21086244-21086263 | None:intergenic | 35.0% | |
| AAAATAACGAGCGAATGCAT+AGG | - | chr1_2:21086245-21086264 | None:intergenic | 35.0% | |
| CAATTGAGAGTTCCAGAATA+TGG | + | chr1_2:21086362-21086381 | Msa0062020:CDS | 35.0% | |
| GAGAAAATGAAACACCTTCT+GGG | - | chr1_2:21086396-21086415 | None:intergenic | 35.0% | |
| TGAGAAAATGAAACACCTTC+TGG | - | chr1_2:21086397-21086416 | None:intergenic | 35.0% | |
| TCAATGATGTATAGTACCTC+TGG | - | chr1_2:21086606-21086625 | None:intergenic | 35.0% | |
| GCATTTCTTTGAGTGTACTT+TGG | + | chr1_2:21086655-21086674 | Msa0062020:intron | 35.0% | |
| !!! | TGTACTTTGGTTTTGAACTC+CGG | + | chr1_2:21086668-21086687 | Msa0062020:intron | 35.0% |
| !! | AAAAGTACCGCATAAGCTTA+AGG | + | chr1_2:21086734-21086753 | Msa0062020:intron | 35.0% |
| TACAATGTGTTGTCAAATGG+CGG | + | chr1_2:21086960-21086979 | Msa0062020:intron | 35.0% | |
| ATTAGACATGGAGACATTAG+AGG | + | chr1_2:21087084-21087103 | Msa0062020:intron | 35.0% | |
| TTAGACATGGAGACATTAGA+GGG | + | chr1_2:21087085-21087104 | Msa0062020:intron | 35.0% | |
| ! | GAGAAGACCTATAGATTTTG+TGG | + | chr1_2:21087167-21087186 | Msa0062020:intron | 35.0% |
| ! | GACCTATAGATTTTGTGGTA+AGG | + | chr1_2:21087172-21087191 | Msa0062020:intron | 35.0% |
| CTCCTTACCACAAAATCTAT+AGG | - | chr1_2:21087177-21087196 | None:intergenic | 35.0% | |
| AAGTATTCATCTGCCTTTAG+TGG | - | chr1_2:21087226-21087245 | None:intergenic | 35.0% | |
| GCACATCAAGTAAGATATGT+TGG | - | chr1_2:21087640-21087659 | None:intergenic | 35.0% | |
| GTTGTAAAGAAAGCAAGACT+TGG | - | chr1_2:21087662-21087681 | None:intergenic | 35.0% | |
| TTACCAGGTAAGTTTGGTAT+TGG | + | chr1_2:21087718-21087737 | Msa0062020:intron | 35.0% | |
| !! | TCTTGGTGTGTTTTGTAGTT+TGG | + | chr1_2:21087788-21087807 | Msa0062020:intron | 35.0% |
| TGCAAAAACATTTAGCACAG+AGG | - | chr1_2:21087834-21087853 | None:intergenic | 35.0% | |
| !! | TCTGTGCTAAATGTTTTTGC+AGG | + | chr1_2:21087833-21087852 | Msa0062020:intron | 35.0% |
| ATATGGAATAGTTTGGCACT+AGG | + | chr1_2:21088221-21088240 | Msa0062020:intron | 35.0% | |
| ! | CTCATTTTACTGAATTGTGG+GGG | + | chr1_2:21088309-21088328 | Msa0062020:intron | 35.0% |
| AAATGTTAGAATCCTCAGCA+AGG | - | chr1_2:21088360-21088379 | None:intergenic | 35.0% | |
| CTCAAATGGATAAATGCAGT+TGG | - | chr1_2:21088418-21088437 | None:intergenic | 35.0% | |
| CAACTGCATTTATCCATTTG+AGG | + | chr1_2:21088416-21088435 | Msa0062020:intron | 35.0% | |
| AAAGATGTTATGGTTGTGGA+TGG | - | chr1_2:21088699-21088718 | None:intergenic | 35.0% | |
| GCTGTCATTGCGTTATTTAA+AGG | - | chr1_2:21088745-21088764 | None:intergenic | 35.0% | |
| GATCTTGCAATGAACAGTAT+TGG | - | chr1_2:21089021-21089040 | None:intergenic | 35.0% | |
| ! | AAGCCTTTTCTAACAAAGCT+AGG | + | chr1_2:21089086-21089105 | Msa0062020:intron | 35.0% |
| !! | GAACCTAGCTTTGTTAGAAA+AGG | - | chr1_2:21089092-21089111 | None:intergenic | 35.0% |
| !! | GTAACTTGTTAAATGGAAGG+AGG | - | chr1_2:21089206-21089225 | None:intergenic | 35.0% |
| !! | GGAGTAACTTGTTAAATGGA+AGG | - | chr1_2:21089209-21089228 | None:intergenic | 35.0% |
| AATGATGAAGCTATAAGCGT+GGG | - | chr1_2:21089230-21089249 | None:intergenic | 35.0% | |
| TAATGATGAAGCTATAAGCG+TGG | - | chr1_2:21089231-21089250 | None:intergenic | 35.0% | |
| ACAGTATATTGATCTTGAGC+TGG | - | chr1_2:21089529-21089548 | None:intergenic | 35.0% | |
| GTACACCACCTTAAAATTCA+AGG | - | chr1_2:21089632-21089651 | None:intergenic | 35.0% | |
| TTACTTAGAAACATCTGGGA+AGG | + | chr1_2:21089714-21089733 | Msa0062020:intron | 35.0% | |
| GAGAAGTTTAATCCTAAGAG+AGG | + | chr1_2:21089783-21089802 | Msa0062020:intron | 35.0% | |
| GACGGTTTCCACAAATTAAT+AGG | + | chr1_2:21089820-21089839 | Msa0062020:intron | 35.0% | |
| TTCGTTATAAGCACGTGAAA+GGG | - | chr1_2:21089874-21089893 | None:intergenic | 35.0% | |
| TTTCGTTATAAGCACGTGAA+AGG | - | chr1_2:21089875-21089894 | None:intergenic | 35.0% | |
| GCAAAGAATCGTAATTTGGT+GGG | - | chr1_2:21090046-21090065 | None:intergenic | 35.0% | |
| TGCAAAGAATCGTAATTTGG+TGG | - | chr1_2:21090047-21090066 | None:intergenic | 35.0% | |
| GCATGCAAAGAATCGTAATT+TGG | - | chr1_2:21090050-21090069 | None:intergenic | 35.0% | |
| ATTACGATTCTTTGCATGCA+CGG | + | chr1_2:21090051-21090070 | Msa0062020:intron | 35.0% | |
| ! | TCAGGATCTGTTGTTTGTTA+AGG | + | chr1_2:21090204-21090223 | Msa0062020:intron | 35.0% |
| ! | CAGGATCTGTTGTTTGTTAA+GGG | + | chr1_2:21090205-21090224 | Msa0062020:intron | 35.0% |
| AGAGATAAGTTTGAGTCTTG+AGG | - | chr1_2:21090302-21090321 | None:intergenic | 35.0% | |
| AAAAGAATCTTGTGTGCCAT+TGG | + | chr1_2:21090400-21090419 | Msa0062020:intron | 35.0% | |
| ! | CGGGTTTTTGCTAAGTAATA+TGG | + | chr1_2:21090669-21090688 | Msa0062020:intron | 35.0% |
| CCCTAACAAATAAACTTCCA+AGG | - | chr1_2:21090877-21090896 | None:intergenic | 35.0% | |
| ! | AGTTTATTTGTTAGGGCCTT+AGG | + | chr1_2:21090881-21090900 | Msa0062020:intron | 35.0% |
| ! | GTTTATTTGTTAGGGCCTTA+GGG | + | chr1_2:21090882-21090901 | Msa0062020:intron | 35.0% |
| ! | TTTATTTGTTAGGGCCTTAG+GGG | + | chr1_2:21090883-21090902 | Msa0062020:intron | 35.0% |
| !! | TTCTGTTAGAGTACTGGTAT+TGG | + | chr1_2:21090911-21090930 | Msa0062020:intron | 35.0% |
| AACCATGAGAAAAACATTCG+AGG | - | chr1_2:21090962-21090981 | None:intergenic | 35.0% | |
| AGTCTACACAAAACCAGATA+GGG | - | chr1_2:21091252-21091271 | None:intergenic | 35.0% | |
| TAGTCTACACAAAACCAGAT+AGG | - | chr1_2:21091253-21091272 | None:intergenic | 35.0% | |
| ATAGTAGAGATTGGATGGAT+TGG | + | chr1_2:21091753-21091772 | Msa0062020:intron | 35.0% | |
| ! | TAGTAGAGATTGGATGGATT+GGG | + | chr1_2:21091754-21091773 | Msa0062020:intron | 35.0% |
| GCTTAGGTCATTTAACAGAT+TGG | + | chr1_2:21091776-21091795 | Msa0062020:intron | 35.0% | |
| ATTTCCGCTTTGACAACTAT+GGG | + | chr1_2:21092108-21092127 | Msa0062020:intron | 35.0% | |
| CTATCTGCAGTCCAAATAAT+CGG | + | chr1_2:21092193-21092212 | Msa0062020:intron | 35.0% | |
| !! | TGCAATGTGTACCGATTATT+TGG | - | chr1_2:21092207-21092226 | None:intergenic | 35.0% |
| ATGTCAGATGAGGGTAATTT+AGG | - | chr1_2:21092255-21092274 | None:intergenic | 35.0% | |
| ! | GACTGAGGAGAGAATAATTT+TGG | - | chr1_2:21092360-21092379 | None:intergenic | 35.0% |
| !! | TATTTGGATTTTGAGGACTG+AGG | - | chr1_2:21092375-21092394 | None:intergenic | 35.0% |
| TATCAACGATCCACAATATC+AGG | - | chr1_2:21092633-21092652 | None:intergenic | 35.0% | |
| !! | TGATCTTCTAGTTTCACAGT+CGG | + | chr1_2:21092790-21092809 | Msa0062020:intron | 35.0% |
| TTCACAGTTCACTTAATGGT+TGG | - | chr1_2:21092820-21092839 | None:intergenic | 35.0% | |
| AACCATTAAGTGAACTGTGA+AGG | + | chr1_2:21092819-21092838 | Msa0062020:intron | 35.0% | |
| TGTTGGAATAGGTAATTGAG+TGG | + | chr1_2:21092932-21092951 | Msa0062020:intron | 35.0% | |
| TTTCACCAGTTTCCTTATAG+GGG | - | chr1_2:21092972-21092991 | None:intergenic | 35.0% | |
| GATTTCACCAGTTTCCTTAT+AGG | - | chr1_2:21092974-21092993 | None:intergenic | 35.0% | |
| TAATTAGGCTAAATCCCTAG+TGG | - | chr1_2:21093003-21093022 | None:intergenic | 35.0% | |
| ! | GGTATCAGAGCTTATCTTTT+TGG | + | chr1_2:21093100-21093119 | Msa0062020:intron | 35.0% |
| TTAGAGTGTGTACAAATGAG+TGG | - | chr1_2:21093127-21093146 | None:intergenic | 35.0% | |
| ! | CACTCTAAATGTCGTGTTTT+TGG | + | chr1_2:21093139-21093158 | Msa0062020:intron | 35.0% |
| !!! | CGTGTTTTTGGTATATTAGC+GGG | + | chr1_2:21093151-21093170 | Msa0062020:intron | 35.0% |
| GCAATTTACATTACTGTCAC+TGG | - | chr1_2:21093222-21093241 | None:intergenic | 35.0% | |
| GAGATATATAGCCTAGATCA+CGG | - | chr1_2:21093258-21093277 | None:intergenic | 35.0% | |
| GGCAAGACAAGATATATAGA+AGG | + | chr1_2:21093296-21093315 | Msa0062020:intron | 35.0% | |
| !! | GCTATTTTCTTCCCATGTTT+AGG | + | chr1_2:21093323-21093342 | Msa0062020:intron | 35.0% |
| ! | TCTTCCCATGTTTAGGTTAT+AGG | + | chr1_2:21093330-21093349 | Msa0062020:intron | 35.0% |
| TGGAAAGGTAAATGAGAGAA+TGG | + | chr1_2:21093385-21093404 | Msa0062020:intron | 35.0% | |
| !!! | AGTGATGTTTCTTTTCAGGT+TGG | + | chr1_2:21093482-21093501 | Msa0062020:intron | 35.0% |
| TCACCATAACACTTCTGATA+AGG | - | chr1_2:21093538-21093557 | None:intergenic | 35.0% | |
| AAACGCAAACCTTAATGTGA+TGG | + | chr1_2:21093660-21093679 | Msa0062020:CDS | 35.0% | |
| GAACACAAAAAAACCTTACC+AGG | - | chr1_2:21093714-21093733 | None:intergenic | 35.0% | |
| TGTCCTAACTAGATCCAAAA+GGG | - | chr1_2:21093806-21093825 | None:intergenic | 35.0% | |
| ATGTCCTAACTAGATCCAAA+AGG | - | chr1_2:21093807-21093826 | None:intergenic | 35.0% | |
| TTTGGATCTAGTTAGGACAT+TGG | + | chr1_2:21093807-21093826 | Msa0062020:intron | 35.0% | |
| TTGGATCTAGTTAGGACATT+GGG | + | chr1_2:21093808-21093827 | Msa0062020:intron | 35.0% | |
| TCCATAAATCTGTGTTTGTG+TGG | + | chr1_2:21093915-21093934 | Msa0062020:intron | 35.0% | |
| AAAAGGGTAAGAGGAATAGT+GGG | - | chr1_2:21093961-21093980 | None:intergenic | 35.0% | |
| ! | AAAAGTGTGAAAAGGGTAAG+AGG | - | chr1_2:21093970-21093989 | None:intergenic | 35.0% |
| ! | CTGCAACAAAAGTGTGAAAA+GGG | - | chr1_2:21093977-21093996 | None:intergenic | 35.0% |
| ! | ACTGCAACAAAAGTGTGAAA+AGG | - | chr1_2:21093978-21093997 | None:intergenic | 35.0% |
| ! | TTTCACACTTTTGTTGCAGT+TGG | + | chr1_2:21093978-21093997 | Msa0062020:intron | 35.0% |
| ! | TTCAATCTTTTCAGCGAATC+GGG | - | chr1_2:21094080-21094099 | None:intergenic | 35.0% |
| AGTGACAAAGCTTGTATCAT+GGG | + | chr1_2:21094206-21094225 | Msa0062020:three_prime_UTR | 35.0% | |
| ! | CATCCTTAAGCAGTTGATAT+TGG | + | chr1_2:21094514-21094533 | Msa0062020:three_prime_UTR | 35.0% |
| GTATGTGCACGTGTATGAAT+GGG | - | chr1_2:21085885-21085904 | None:intergenic | 40.0% | |
| TGTATGTGCACGTGTATGAA+TGG | - | chr1_2:21085886-21085905 | None:intergenic | 40.0% | |
| TGAGAGTTCCAGAATATGGT+TGG | + | chr1_2:21086366-21086385 | Msa0062020:CDS | 40.0% | |
| ! | CTCAATTTTGTGGTGAATGC+AGG | + | chr1_2:21086413-21086432 | Msa0062020:CDS | 40.0% |
| TCTTCTTTCGGAATGTACAG+AGG | + | chr1_2:21086574-21086593 | Msa0062020:CDS | 40.0% | |
| !!! | GTACTTTGGTTTTGAACTCC+GGG | + | chr1_2:21086669-21086688 | Msa0062020:intron | 40.0% |
| !!! | TACTTTGGTTTTGAACTCCG+GGG | + | chr1_2:21086670-21086689 | Msa0062020:intron | 40.0% |
| TGCTGTATGAGATAGAGTGT+TGG | + | chr1_2:21086789-21086808 | Msa0062020:intron | 40.0% | |
| ! | GCTGTATGAGATAGAGTGTT+GGG | + | chr1_2:21086790-21086809 | Msa0062020:intron | 40.0% |
| CCAACGCAACATTCTAATCT+CGG | - | chr1_2:21086852-21086871 | None:intergenic | 40.0% | |
| AGTCCAGTGTTGTCAAATAG+CGG | + | chr1_2:21086882-21086901 | Msa0062020:intron | 40.0% | |
| GCTGTAGCATTGTTACATAG+CGG | + | chr1_2:21086993-21087012 | Msa0062020:intron | 40.0% | |
| TTACCCAATCTTGTCAACCA+CGG | - | chr1_2:21087048-21087067 | None:intergenic | 40.0% | |
| GAGACATTAGAGGGAAAGTT+GGG | + | chr1_2:21087094-21087113 | Msa0062020:intron | 40.0% | |
| AGACATTAGAGGGAAAGTTG+GGG | + | chr1_2:21087095-21087114 | Msa0062020:intron | 40.0% | |
| AAGGGTAGTCAAACCACTAA+AGG | + | chr1_2:21087210-21087229 | Msa0062020:intron | 40.0% | |
| CAGCTCCACTTAGTATGATA+AGG | + | chr1_2:21087350-21087369 | Msa0062020:intron | 40.0% | |
| ! | CCAAGCCTTATCATACTAAG+TGG | - | chr1_2:21087358-21087377 | None:intergenic | 40.0% |
| CCACTTAGTATGATAAGGCT+TGG | + | chr1_2:21087355-21087374 | Msa0062020:intron | 40.0% | |
| CTTTACAACATATGCACTCC+TGG | + | chr1_2:21087673-21087692 | Msa0062020:CDS | 40.0% | |
| ACTCCAATACCAAACTTACC+TGG | - | chr1_2:21087724-21087743 | None:intergenic | 40.0% | |
| TGTTGTGGTTTATGCTGTTC+AGG | + | chr1_2:21087905-21087924 | Msa0062020:CDS | 40.0% | |
| ! | CACACAGCTCGATTCATTTT+TGG | + | chr1_2:21087985-21088004 | Msa0062020:intron | 40.0% |
| TGGATGCAACAGCGTTTATT+TGG | + | chr1_2:21088187-21088206 | Msa0062020:intron | 40.0% | |
| ATTTGGCGACTGGATTGATA+TGG | + | chr1_2:21088204-21088223 | Msa0062020:intron | 40.0% | |
| ! | GCAGCAGTTTTACTTTCACT+AGG | - | chr1_2:21088824-21088843 | None:intergenic | 40.0% |
| !! | TGCTGCTTTAAGTGCAAAAC+TGG | + | chr1_2:21088838-21088857 | Msa0062020:intron | 40.0% |
| ! | GCTTTAAGTGCAAAACTGGA+TGG | + | chr1_2:21088842-21088861 | Msa0062020:intron | 40.0% |
| AGTGGCAATATGCAATCATC+AGG | - | chr1_2:21088978-21088997 | None:intergenic | 40.0% | |
| GATCATGATCGTAGAGACAA+AGG | + | chr1_2:21089037-21089056 | Msa0062020:intron | 40.0% | |
| !! | CGTGGGAGTAACTTGTTAAA+TGG | - | chr1_2:21089213-21089232 | None:intergenic | 40.0% |
| TAATAGATGCTAGAGGTGAC+TGG | - | chr1_2:21089382-21089401 | None:intergenic | 40.0% | |
| GGAATTACGTACAAGTTGTG+TGG | - | chr1_2:21089433-21089452 | None:intergenic | 40.0% | |
| CAAACTATGGTACTGTCTAC+AGG | + | chr1_2:21089552-21089571 | Msa0062020:intron | 40.0% | |
| ! | CTCCACCACCTTGAATTTTA+AGG | + | chr1_2:21089621-21089640 | Msa0062020:intron | 40.0% |
| CACCTTAAAATTCAAGGTGG+TGG | - | chr1_2:21089626-21089645 | None:intergenic | 40.0% | |
| !! | CACCACCTTGAATTTTAAGG+TGG | + | chr1_2:21089624-21089643 | Msa0062020:intron | 40.0% |
| CACCACCTTAAAATTCAAGG+TGG | - | chr1_2:21089629-21089648 | None:intergenic | 40.0% | |
| TTAATCCTAAGAGAGGGAGT+AGG | + | chr1_2:21089790-21089809 | Msa0062020:intron | 40.0% | |
| TCGTTATAAGCACGTGAAAG+GGG | - | chr1_2:21089873-21089892 | None:intergenic | 40.0% | |
| ATAACAGCTGTTCACAGATC+AGG | - | chr1_2:21089951-21089970 | None:intergenic | 40.0% | |
| ! | GAAGAGTACAGTCAAGATCA+CGG | - | chr1_2:21090137-21090156 | None:intergenic | 40.0% |
| TAAGGGTCTGTTAACAGTTC+AGG | + | chr1_2:21090222-21090241 | Msa0062020:intron | 40.0% | |
| CGTACTAGTCATTCTGTCTA+AGG | + | chr1_2:21090576-21090595 | Msa0062020:CDS | 40.0% | |
| TGGTATACATGTTGCAACAG+CGG | + | chr1_2:21090689-21090708 | Msa0062020:intron | 40.0% | |
| CAACTCCCCTTGATGTAATT+TGG | + | chr1_2:21090792-21090811 | Msa0062020:intron | 40.0% | |
| GCATGAGCCTAATATGTGAT+TGG | - | chr1_2:21090850-21090869 | None:intergenic | 40.0% | |
| ATTAGGCTCATGCAATTCCT+TGG | + | chr1_2:21090857-21090876 | Msa0062020:intron | 40.0% | |
| GCACATTTCTGTTAGAGTAC+TGG | + | chr1_2:21090905-21090924 | Msa0062020:intron | 40.0% | |
| ! | GTCCTCGAATGTTTTTCTCA+TGG | + | chr1_2:21090957-21090976 | Msa0062020:intron | 40.0% |
| !! | GTATCACTGATTTCCCTATC+TGG | + | chr1_2:21091236-21091255 | Msa0062020:intron | 40.0% |
| GCTTTCCTGTTGAATCCAAA+GGG | + | chr1_2:21091289-21091308 | Msa0062020:CDS | 40.0% | |
| !!! | TTTTGCTTCTATTTCTGGCG+CGG | - | chr1_2:21091518-21091537 | None:intergenic | 40.0% |
| GCAAAAAGATGGAGAAGAAG+TGG | + | chr1_2:21091532-21091551 | Msa0062020:intron | 40.0% | |
| TAGTTGTCAAAGCGGAAATG+CGG | - | chr1_2:21092107-21092126 | None:intergenic | 40.0% | |
| CATTTCCGCTTTGACAACTA+TGG | + | chr1_2:21092107-21092126 | Msa0062020:intron | 40.0% | |
| TAATAACTGCCACCATAGCA+GGG | + | chr1_2:21092680-21092699 | Msa0062020:intron | 40.0% | |
| CCTCTTGCTAATAGAAGGTA+AGG | - | chr1_2:21092748-21092767 | None:intergenic | 40.0% | |
| CCTTACCTTCTATTAGCAAG+AGG | + | chr1_2:21092745-21092764 | Msa0062020:intron | 40.0% | |
| ATCGACCTCTTGCTAATAGA+AGG | - | chr1_2:21092753-21092772 | None:intergenic | 40.0% | |
| AGCCTTCACAGTTCACTTAA+TGG | - | chr1_2:21092824-21092843 | None:intergenic | 40.0% | |
| !! | TATTAGTGGGGTGTTGGAAT+AGG | + | chr1_2:21092921-21092940 | Msa0062020:intron | 40.0% |
| TTCACCAGTTTCCTTATAGG+GGG | - | chr1_2:21092971-21092990 | None:intergenic | 40.0% | |
| GTGAAATCACACATCCACTA+GGG | + | chr1_2:21092986-21093005 | Msa0062020:intron | 40.0% | |
| TAGCCTAATTAGTCCTTCCA+AGG | + | chr1_2:21093012-21093031 | Msa0062020:intron | 40.0% | |
| AGCCTAATTAGTCCTTCCAA+GGG | + | chr1_2:21093013-21093032 | Msa0062020:intron | 40.0% | |
| AACCCTTGGAAGGACTAATT+AGG | - | chr1_2:21093018-21093037 | None:intergenic | 40.0% | |
| AGAAATTCTCAACCCTTGGA+AGG | - | chr1_2:21093028-21093047 | None:intergenic | 40.0% | |
| AATCTCAAAAGCTAGCTCAG+GGG | - | chr1_2:21093054-21093073 | None:intergenic | 40.0% | |
| CAATCTCAAAAGCTAGCTCA+GGG | - | chr1_2:21093055-21093074 | None:intergenic | 40.0% | |
| TCAATCTCAAAAGCTAGCTC+AGG | - | chr1_2:21093056-21093075 | None:intergenic | 40.0% | |
| !!! | GCTAGCTTTTGAGATTGAGT+TGG | + | chr1_2:21093058-21093077 | Msa0062020:intron | 40.0% |
| GGATCATGCAGATTCTTAGA+TGG | + | chr1_2:21093079-21093098 | Msa0062020:intron | 40.0% | |
| ACTGGAGTATGTAGAAATGC+GGG | - | chr1_2:21093204-21093223 | None:intergenic | 40.0% | |
| CACTGGAGTATGTAGAAATG+CGG | - | chr1_2:21093205-21093224 | None:intergenic | 40.0% | |
| CTCATCACACAACAGAATAG+CGG | + | chr1_2:21093275-21093294 | Msa0062020:intron | 40.0% | |
| TAGGATGGTCCATCACATTA+AGG | - | chr1_2:21093672-21093691 | None:intergenic | 40.0% | |
| GTCCTAACTAGATCCAAAAG+GGG | - | chr1_2:21093805-21093824 | None:intergenic | 40.0% | |
| GCCACACAAACACAGATTTA+TGG | - | chr1_2:21093919-21093938 | None:intergenic | 40.0% | |
| GAAAAGGGTAAGAGGAATAG+TGG | - | chr1_2:21093962-21093981 | None:intergenic | 40.0% | |
| TATTGTGTGATACCACGCTT+TGG | - | chr1_2:21094054-21094073 | None:intergenic | 40.0% | |
| !! | CACTGATTGCTCCTTTTTCT+CGG | - | chr1_2:21094107-21094126 | None:intergenic | 40.0% |
| GAGTGACAAAGCTTGTATCA+TGG | + | chr1_2:21094205-21094224 | Msa0062020:three_prime_UTR | 40.0% | |
| AGCAACCATAATTGGAACAG+TGG | + | chr1_2:21094371-21094390 | Msa0062020:three_prime_UTR | 40.0% | |
| CTGTTCCACTGTTCCAATTA+TGG | - | chr1_2:21094379-21094398 | None:intergenic | 40.0% | |
| !! | GAGGTGTTGTTGGTCATTGT+GGG | - | chr1_2:21086027-21086046 | None:intergenic | 45.0% |
| !! | ATGGGAAGGTACCAAAGCTA+TGG | - | chr1_2:21086199-21086218 | None:intergenic | 45.0% |
| TGGGTAGTCCAACCATATTC+TGG | - | chr1_2:21086377-21086396 | None:intergenic | 45.0% | |
| ATATGGTTGGACTACCCAGA+AGG | + | chr1_2:21086379-21086398 | Msa0062020:CDS | 45.0% | |
| ATACAGCATCGCCCATCTTA+AGG | - | chr1_2:21086777-21086796 | None:intergenic | 45.0% | |
| CCGAGATTAGAATGTTGCGT+TGG | + | chr1_2:21086849-21086868 | Msa0062020:intron | 45.0% | |
| AGAATGTTGCGTTGGATGTG+TGG | + | chr1_2:21086857-21086876 | Msa0062020:intron | 45.0% | |
| TAGCCGCTATTTGACAACAC+TGG | - | chr1_2:21086888-21086907 | None:intergenic | 45.0% | |
| ATCTTGTCAACCACGGATCA+CGG | - | chr1_2:21087041-21087060 | None:intergenic | 45.0% | |
| TGATCCGTGGTTGACAAGAT+TGG | + | chr1_2:21087041-21087060 | Msa0062020:intron | 45.0% | |
| GATCCGTGGTTGACAAGATT+GGG | + | chr1_2:21087042-21087061 | Msa0062020:intron | 45.0% | |
| GGAGACATTAGAGGGAAAGT+TGG | + | chr1_2:21087093-21087112 | Msa0062020:intron | 45.0% | |
| ACTAAGTGGAGCTGACTACA+TGG | - | chr1_2:21087344-21087363 | None:intergenic | 45.0% | |
| CTGGGCTGAGATTTATTACC+AGG | + | chr1_2:21087703-21087722 | Msa0062020:CDS | 45.0% | |
| AACAGCGTTTATTTGGCGAC+TGG | + | chr1_2:21088194-21088213 | Msa0062020:intron | 45.0% | |
| ACTGAATTGTGGGGGACATT+TGG | + | chr1_2:21088317-21088336 | Msa0062020:intron | 45.0% | |
| TGGTCACTGTTGTCAAGTAG+AGG | + | chr1_2:21088565-21088584 | Msa0062020:intron | 45.0% | |
| AGTGACAACATACAGGACAC+AGG | - | chr1_2:21089149-21089168 | None:intergenic | 45.0% | |
| TCCAGCTGTATCTTGCAGTT+TGG | + | chr1_2:21089302-21089321 | Msa0062020:intron | 45.0% | |
| ACCAAACTGCAAGATACAGC+TGG | - | chr1_2:21089306-21089325 | None:intergenic | 45.0% | |
| TACGTACAAGTTGTGTGGCA+AGG | - | chr1_2:21089428-21089447 | None:intergenic | 45.0% | |
| TGGTCACACACAGTGTCTAT+AGG | - | chr1_2:21089591-21089610 | None:intergenic | 45.0% | |
| CTGTGTGTGACCACTTTCTA+AGG | + | chr1_2:21089598-21089617 | Msa0062020:intron | 45.0% | |
| CATATCCTACTCCCTCTCTT+AGG | - | chr1_2:21089798-21089817 | None:intergenic | 45.0% | |
| AAGAGAGGGAGTAGGATATG+TGG | + | chr1_2:21089798-21089817 | Msa0062020:intron | 45.0% | |
| CGTTATAAGCACGTGAAAGG+GGG | - | chr1_2:21089872-21089891 | None:intergenic | 45.0% | |
| !! | ACACAGTTCTCCTGGTTCTA+CGG | + | chr1_2:21090000-21090019 | Msa0062020:intron | 45.0% |
| ! | TCGTAATTTGGTGGGAAGCT+GGG | - | chr1_2:21090038-21090057 | None:intergenic | 45.0% |
| ! | ATCGTAATTTGGTGGGAAGC+TGG | - | chr1_2:21090039-21090058 | None:intergenic | 45.0% |
| AATCGTGCGATTCTGTGAAC+AGG | - | chr1_2:21090087-21090106 | None:intergenic | 45.0% | |
| AGAATGACTAGTACGCTGAC+TGG | - | chr1_2:21090571-21090590 | None:intergenic | 45.0% | |
| ! | CTGTCTAAGGTGTTCTTTGC+AGG | + | chr1_2:21090589-21090608 | Msa0062020:CDS | 45.0% |
| ! | GTTTCTTTGTTTGCTGCCCT+TGG | + | chr1_2:21090711-21090730 | Msa0062020:CDS | 45.0% |
| ACCGTAGAGAAGAAAGCCAA+GGG | - | chr1_2:21090730-21090749 | None:intergenic | 45.0% | |
| CTAACAGAAATGTGCCCCTA+AGG | - | chr1_2:21090900-21090919 | None:intergenic | 45.0% | |
| CGCTTTCCTGTTGAATCCAA+AGG | + | chr1_2:21091288-21091307 | Msa0062020:CDS | 45.0% | |
| ! | CAAGAGGTATGCAATCTGAC+AGG | + | chr1_2:21091327-21091346 | Msa0062020:intron | 45.0% |
| AGCCAAAAAAACCGCTATCG+CGG | - | chr1_2:21091396-21091415 | None:intergenic | 45.0% | |
| CAGATCTGCAAGTGTGTTTG+CGG | + | chr1_2:21091683-21091702 | Msa0062020:intron | 45.0% | |
| TGTTGGGAGAGAGAGTAACT+AGG | + | chr1_2:21091707-21091726 | Msa0062020:intron | 45.0% | |
| GTTGGGAGAGAGAGTAACTA+GGG | + | chr1_2:21091708-21091727 | Msa0062020:intron | 45.0% | |
| !! | AGATTGGATGGATTGGGCTT+AGG | + | chr1_2:21091760-21091779 | Msa0062020:intron | 45.0% |
| TCAGCCCATAGTTGTCAAAG+CGG | - | chr1_2:21092115-21092134 | None:intergenic | 45.0% | |
| GTAATAACTGCCACCATAGC+AGG | + | chr1_2:21092679-21092698 | Msa0062020:intron | 45.0% | |
| AAGAGCTATTAGTGGGGTGT+TGG | + | chr1_2:21092915-21092934 | Msa0062020:intron | 45.0% | |
| GGTGAAATCACACATCCACT+AGG | + | chr1_2:21092985-21093004 | Msa0062020:intron | 45.0% | |
| ATCTCAAAAGCTAGCTCAGG+GGG | - | chr1_2:21093053-21093072 | None:intergenic | 45.0% | |
| ATAAAGGAGGAGAGAGAGAG+TGG | + | chr1_2:21093365-21093384 | Msa0062020:intron | 45.0% | |
| !! | GTAAGATTGGTGACCCCTTT+TGG | + | chr1_2:21093789-21093808 | Msa0062020:intron | 45.0% |
| ! | GACCCCTTTTGGATCTAGTT+AGG | + | chr1_2:21093800-21093819 | Msa0062020:intron | 45.0% |
| TCTAGTTAGGACATTGGGTG+TGG | + | chr1_2:21093813-21093832 | Msa0062020:intron | 45.0% | |
| CTAGTTAGGACATTGGGTGT+GGG | + | chr1_2:21093814-21093833 | Msa0062020:intron | 45.0% | |
| ! | TAAACAGCCTTTTAGCCGAG+TGG | - | chr1_2:21093894-21093913 | None:intergenic | 45.0% |
| ! | TAAGAGGAATAGTGGGAGAG+AGG | - | chr1_2:21093954-21093973 | None:intergenic | 45.0% |
| ! | CACACTTTTGTTGCAGTTGG+TGG | + | chr1_2:21093981-21094000 | Msa0062020:intron | 45.0% |
| CGAGAAAAAGGAGCAATCAG+TGG | + | chr1_2:21094105-21094124 | Msa0062020:three_prime_UTR | 45.0% | |
| ! | TGGCTGATTCTCATAGTCCA+AGG | + | chr1_2:21094141-21094160 | Msa0062020:three_prime_UTR | 45.0% |
| ! | GGCTGATTCTCATAGTCCAA+GGG | + | chr1_2:21094142-21094161 | Msa0062020:three_prime_UTR | 45.0% |
| !! | TTGAAATAAAAAATAATAAA+AGG | - | chr1_2:21088784-21088803 | None:intergenic | 5.0% |
| TGCTAGGGGCTAAGATTGGT+GGG | - | chr1_2:21085920-21085939 | None:intergenic | 50.0% | |
| TTGCTAGGGGCTAAGATTGG+TGG | - | chr1_2:21085921-21085940 | None:intergenic | 50.0% | |
| ! | TGCTTGCTAGGGGCTAAGAT+TGG | - | chr1_2:21085924-21085943 | None:intergenic | 50.0% |
| GTCATTGTGGGAACGATCGA+CGG | - | chr1_2:21086015-21086034 | None:intergenic | 50.0% | |
| !! | CGAGGTGTTGTTGGTCATTG+TGG | - | chr1_2:21086028-21086047 | None:intergenic | 50.0% |
| !! | AACTCACCGATTCCTCAACC+TGG | + | chr1_2:21086094-21086113 | Msa0062020:CDS | 50.0% |
| ! | GTTCCACCAGGTTGAGGAAT+CGG | - | chr1_2:21086103-21086122 | None:intergenic | 50.0% |
| GAACGACATCGACGATTCTC+CGG | + | chr1_2:21086119-21086138 | Msa0062020:CDS | 50.0% | |
| ACATCGACGATTCTCCGGTT+TGG | + | chr1_2:21086124-21086143 | Msa0062020:CDS | 50.0% | |
| AAGATGCGGTCTTGCCAAAC+CGG | - | chr1_2:21086141-21086160 | None:intergenic | 50.0% | |
| !! | GGAAGGTACCAAAGCTATGG+CGG | - | chr1_2:21086196-21086215 | None:intergenic | 50.0% |
| TGTACAGAGGTTACAGCCAG+AGG | + | chr1_2:21086587-21086606 | Msa0062020:CDS | 50.0% | |
| !!! | TTTGGTTTTGAACTCCGGGG+TGG | + | chr1_2:21086673-21086692 | Msa0062020:intron | 50.0% |
| CCACGGATCACGGAAAATAG+CGG | - | chr1_2:21087031-21087050 | None:intergenic | 50.0% | |
| !! | ATGCACTCCTGGTCTTGTTC+TGG | + | chr1_2:21087684-21087703 | Msa0062020:CDS | 50.0% |
| !! | TGCACTCCTGGTCTTGTTCT+GGG | + | chr1_2:21087685-21087704 | Msa0062020:CDS | 50.0% |
| ACTTGGCTTCAGTCCATCAG+TGG | - | chr1_2:21087871-21087890 | None:intergenic | 50.0% | |
| ATAATCCACCGCAGTGCACA+TGG | - | chr1_2:21088591-21088610 | None:intergenic | 50.0% | |
| CTGCTATGGCCTGTGTATGA+AGG | + | chr1_2:21088621-21088640 | Msa0062020:intron | 50.0% | |
| TATGGCCTGTGTATGAAGGC+TGG | + | chr1_2:21088625-21088644 | Msa0062020:intron | 50.0% | |
| TATGAAGGCTGGTGGCACAA+TGG | + | chr1_2:21088636-21088655 | Msa0062020:intron | 50.0% | |
| ! | TGGCGGAAATGGCCTGTTTT+TGG | + | chr1_2:21088656-21088675 | Msa0062020:intron | 50.0% |
| ! | CATGGTGGAAGGCCAAAAAC+AGG | - | chr1_2:21088671-21088690 | None:intergenic | 50.0% |
| !!! | CTGTTTTTGGCCTTCCACCA+TGG | + | chr1_2:21088669-21088688 | Msa0062020:intron | 50.0% |
| CTATGGTACTGTCTACAGGC+AGG | + | chr1_2:21089556-21089575 | Msa0062020:intron | 50.0% | |
| GAGGGAGTAGGATATGTGGA+CGG | + | chr1_2:21089802-21089821 | Msa0062020:intron | 50.0% | |
| TGCGCAGACGCAAACAGAAT+CGG | + | chr1_2:21089970-21089989 | Msa0062020:intron | 50.0% | |
| CAGACGCAAACAGAATCGGA+CGG | + | chr1_2:21089974-21089993 | Msa0062020:intron | 50.0% | |
| CACACAGAAACCGTAGAACC+AGG | - | chr1_2:21090013-21090032 | None:intergenic | 50.0% | |
| !! | CTGGTTCTACGGTTTCTGTG+TGG | + | chr1_2:21090011-21090030 | Msa0062020:intron | 50.0% |
| ! | CGTAATTTGGTGGGAAGCTG+GGG | - | chr1_2:21090037-21090056 | None:intergenic | 50.0% |
| TGCGATTCTGTGAACAGGCT+AGG | - | chr1_2:21090082-21090101 | None:intergenic | 50.0% | |
| ! | GCCCTTGGCTTTCTTCTCTA+CGG | + | chr1_2:21090726-21090745 | Msa0062020:CDS | 50.0% |
| CACCGTAGAGAAGAAAGCCA+AGG | - | chr1_2:21090731-21090750 | None:intergenic | 50.0% | |
| ! | CTTGGCTTTCTTCTCTACGG+TGG | + | chr1_2:21090729-21090748 | Msa0062020:CDS | 50.0% |
| GCTTTCTTCTCTACGGTGGA+AGG | + | chr1_2:21090733-21090752 | Msa0062020:CDS | 50.0% | |
| GCCAAAAAAACCGCTATCGC+GGG | - | chr1_2:21091395-21091414 | None:intergenic | 50.0% | |
| TTGACCGATGCGGTCAAAAG+CGG | + | chr1_2:21091448-21091467 | Msa0062020:intron | 50.0% | |
| CAAGTGTGTTTGCGGCTGTT+GGG | + | chr1_2:21091691-21091710 | Msa0062020:intron | 50.0% | |
| TTCTCTAGACCCTGCTATGG+TGG | - | chr1_2:21092692-21092711 | None:intergenic | 50.0% | |
| ACCATAGCAGGGTCTAGAGA+AGG | + | chr1_2:21092691-21092710 | Msa0062020:intron | 50.0% | |
| CCATAGCAGGGTCTAGAGAA+GGG | + | chr1_2:21092692-21092711 | Msa0062020:intron | 50.0% | |
| GAGAAGGGTTAAACCTCCTG+TGG | + | chr1_2:21092707-21092726 | Msa0062020:intron | 50.0% | |
| GGGTTAAACCTCCTGTGGTA+CGG | + | chr1_2:21092712-21092731 | Msa0062020:intron | 50.0% | |
| GAATACAACCGTACCACAGG+AGG | - | chr1_2:21092723-21092742 | None:intergenic | 50.0% | |
| GCTGAATACAACCGTACCAC+AGG | - | chr1_2:21092726-21092745 | None:intergenic | 50.0% | |
| CAACAACCTCACCCCCTATA+AGG | + | chr1_2:21092957-21092976 | Msa0062020:intron | 50.0% | |
| CAGTTTCCTTATAGGGGGTG+AGG | - | chr1_2:21092966-21092985 | None:intergenic | 50.0% | |
| CTCACCCCCTATAAGGAAAC+TGG | + | chr1_2:21092964-21092983 | Msa0062020:intron | 50.0% | |
| GGGCAGAAATTCTCAACCCT+TGG | - | chr1_2:21093032-21093051 | None:intergenic | 50.0% | |
| TCTCAAAAGCTAGCTCAGGG+GGG | - | chr1_2:21093052-21093071 | None:intergenic | 50.0% | |
| AGATCACGGCTGCTTAGAAG+CGG | - | chr1_2:21093244-21093263 | None:intergenic | 50.0% | |
| CTTCTAAGCAGCCGTGATCT+AGG | + | chr1_2:21093244-21093263 | Msa0062020:intron | 50.0% | |
| CATCTCAGTTGGTTGTCAGG+GGG | - | chr1_2:21093871-21093890 | None:intergenic | 50.0% | |
| GCATCTCAGTTGGTTGTCAG+GGG | - | chr1_2:21093872-21093891 | None:intergenic | 50.0% | |
| GGCATCTCAGTTGGTTGTCA+GGG | - | chr1_2:21093873-21093892 | None:intergenic | 50.0% | |
| TGGCATCTCAGTTGGTTGTC+AGG | - | chr1_2:21093874-21093893 | None:intergenic | 50.0% | |
| CAACCAACTGAGATGCCACT+CGG | + | chr1_2:21093876-21093895 | Msa0062020:intron | 50.0% | |
| TGAGATGCCACTCGGCTAAA+AGG | + | chr1_2:21093884-21093903 | Msa0062020:intron | 50.0% | |
| TGTGTGATACCACGCTTTGG+TGG | - | chr1_2:21094051-21094070 | None:intergenic | 50.0% | |
| GGAACGATCGACGGAGTTTG+GGG | - | chr1_2:21086006-21086025 | None:intergenic | 55.0% | |
| GGGAACGATCGACGGAGTTT+GGG | - | chr1_2:21086007-21086026 | None:intergenic | 55.0% | |
| TGGGAACGATCGACGGAGTT+TGG | - | chr1_2:21086008-21086027 | None:intergenic | 55.0% | |
| !! | TCACCGATTCCTCAACCTGG+TGG | + | chr1_2:21086097-21086116 | Msa0062020:CDS | 55.0% |
| GATGTCGTTCCACCAGGTTG+AGG | - | chr1_2:21086109-21086128 | None:intergenic | 55.0% | |
| ATCGTCGATGTCGTTCCACC+AGG | - | chr1_2:21086115-21086134 | None:intergenic | 55.0% | |
| CGTCGTTTCCGCCATAGCTT+TGG | + | chr1_2:21086185-21086204 | Msa0062020:CDS | 55.0% | |
| GAACTCCGGGGTGGTTGAAA+TGG | + | chr1_2:21086682-21086701 | Msa0062020:intron | 55.0% | |
| TCCGGGGTGGTTGAAATGGA+GGG | + | chr1_2:21086686-21086705 | Msa0062020:intron | 55.0% | |
| !! | CCGCTATTTTCCGTGATCCG+TGG | + | chr1_2:21087028-21087047 | Msa0062020:intron | 55.0% |
| TCTCAGCCCAGAACAAGACC+AGG | - | chr1_2:21087694-21087713 | None:intergenic | 55.0% | |
| GCACGTGCTGTATCCACTGA+TGG | + | chr1_2:21087855-21087874 | Msa0062020:CDS | 55.0% | |
| GGCACTAGGCTCGAAAGTCA+AGG | + | chr1_2:21088235-21088254 | Msa0062020:intron | 55.0% | |
| AGTAGAGGCCATGTGCACTG+CGG | + | chr1_2:21088580-21088599 | Msa0062020:intron | 55.0% | |
| TGCCACCAGCCTTCATACAC+AGG | - | chr1_2:21088633-21088652 | None:intergenic | 55.0% | |
| ! | TGGTGGCACAATGGCGGAAA+TGG | + | chr1_2:21088645-21088664 | Msa0062020:intron | 55.0% |
| TTGTGGATGGCTGACCATGG+TGG | - | chr1_2:21088686-21088705 | None:intergenic | 55.0% | |
| TGGTTGTGGATGGCTGACCA+TGG | - | chr1_2:21088689-21088708 | None:intergenic | 55.0% | |
| CACAGGCGCTTGATGAGCAA+AGG | - | chr1_2:21089132-21089151 | None:intergenic | 55.0% | |
| GAGCTGGAATGCGAGTCACT+TGG | - | chr1_2:21089513-21089532 | None:intergenic | 55.0% | |
| !! | GGTGGTGGAGCCTTAGAAAG+TGG | - | chr1_2:21089611-21089630 | None:intergenic | 55.0% |
| GCAGTGCATAGCAGCAGTGA+CGG | + | chr1_2:21089736-21089755 | Msa0062020:intron | 55.0% | |
| CGACGCCCTTTGGATTCAAC+AGG | - | chr1_2:21091297-21091316 | None:intergenic | 55.0% | |
| CAGCTTCTTACGACGCCCTT+TGG | - | chr1_2:21091307-21091326 | None:intergenic | 55.0% | |
| GCGTCGTAAGAAGCTGCAAG+AGG | + | chr1_2:21091311-21091330 | Msa0062020:CDS | 55.0% | |
| !!! | GCCCGCGATAGCGGTTTTTT+TGG | + | chr1_2:21091391-21091410 | Msa0062020:intron | 55.0% |
| TTGGCTTCTCCGCGTTGAAC+TGG | + | chr1_2:21091410-21091429 | Msa0062020:intron | 55.0% | |
| TGGCTTCTCCGCGTTGAACT+GGG | + | chr1_2:21091411-21091430 | Msa0062020:intron | 55.0% | |
| ATCGGTCAACTGACACGCAC+CGG | - | chr1_2:21091437-21091456 | None:intergenic | 55.0% | |
| TGCGTGTCAGTTGACCGATG+CGG | + | chr1_2:21091438-21091457 | Msa0062020:intron | 55.0% | |
| GCAAGTGTGTTTGCGGCTGT+TGG | + | chr1_2:21091690-21091709 | Msa0062020:intron | 55.0% | |
| !!! | GCGGGCGCTTTTTCATAACG+CGG | - | chr1_2:21092034-21092053 | None:intergenic | 55.0% |
| GGCCACCCCAAAAATTGACG+CGG | - | chr1_2:21092076-21092095 | None:intergenic | 55.0% | |
| CCCTTCTCTAGACCCTGCTA+TGG | - | chr1_2:21092695-21092714 | None:intergenic | 55.0% | |
| GGAGGAGAGAGAGAGTGGAA+AGG | + | chr1_2:21093370-21093389 | Msa0062020:intron | 55.0% | |
| GGACATTGGGTGTGGGTTCA+TGG | + | chr1_2:21093821-21093840 | Msa0062020:intron | 55.0% | |
| TCAGGGGGATGTGGTGTTCA+AGG | - | chr1_2:21093856-21093875 | None:intergenic | 55.0% | |
| AGTTGGTTGTCAGGGGGATG+TGG | - | chr1_2:21093865-21093884 | None:intergenic | 55.0% | |
| TAGCCGAGTGGCATCTCAGT+TGG | - | chr1_2:21093882-21093901 | None:intergenic | 55.0% | |
| AGGAAGCTTCCACCAAAGCG+TGG | + | chr1_2:21094039-21094058 | Msa0062020:CDS | 55.0% | |
| CAACAACACCTCGCCGTCGT+CGG | + | chr1_2:21086035-21086054 | Msa0062020:CDS | 60.0% | |
| ! | CGGCGAGGGTGTAGAAGATG+CGG | - | chr1_2:21086155-21086174 | None:intergenic | 60.0% |
| CGCATCTTCTACACCCTCGC+CGG | + | chr1_2:21086153-21086172 | Msa0062020:CDS | 60.0% | |
| TACACCCTCGCCGGCCTTTA+CGG | + | chr1_2:21086162-21086181 | Msa0062020:CDS | 60.0% | |
| GGAAACGACGCCGTAAAGGC+CGG | - | chr1_2:21086175-21086194 | None:intergenic | 60.0% | |
| TGGCGGAAACGACGCCGTAA+AGG | - | chr1_2:21086179-21086198 | None:intergenic | 60.0% | |
| CTCCGGGGTGGTTGAAATGG+AGG | + | chr1_2:21086685-21086704 | Msa0062020:intron | 60.0% | |
| CCCCTCCATTTCAACCACCC+CGG | - | chr1_2:21086690-21086709 | None:intergenic | 60.0% | |
| CCGGGGTGGTTGAAATGGAG+GGG | + | chr1_2:21086687-21086706 | Msa0062020:intron | 60.0% | |
| CGGGGTGGTTGAAATGGAGG+GGG | + | chr1_2:21086688-21086707 | Msa0062020:intron | 60.0% | |
| GGGGTGGTTGAAATGGAGGG+GGG | + | chr1_2:21086689-21086708 | Msa0062020:intron | 60.0% | |
| TTGAAATGGAGGGGGGCCGA+TGG | + | chr1_2:21086696-21086715 | Msa0062020:intron | 60.0% | |
| TGAAATGGAGGGGGGCCGAT+GGG | + | chr1_2:21086697-21086716 | Msa0062020:intron | 60.0% | |
| GGCCTGTGTATGAAGGCTGG+TGG | + | chr1_2:21088628-21088647 | Msa0062020:intron | 60.0% | |
| GAAGGCTGGTGGCACAATGG+CGG | + | chr1_2:21088639-21088658 | Msa0062020:intron | 60.0% | |
| ! | GGATGGCTGACCATGGTGGA+AGG | - | chr1_2:21088682-21088701 | None:intergenic | 60.0% |
| AAGCACGTGAAAGGGGGCGA+CGG | - | chr1_2:21089866-21089885 | None:intergenic | 60.0% | |
| CACAGATCAGGTCTGCGACC+TGG | - | chr1_2:21089939-21089958 | None:intergenic | 60.0% | |
| GACGGTGCACACAGTTCTCC+TGG | + | chr1_2:21089992-21090011 | Msa0062020:intron | 60.0% | |
| TTCTCCGCGTTGAACTGGGC+CGG | + | chr1_2:21091415-21091434 | Msa0062020:intron | 60.0% | |
| ! | TCCCGCGCCGCGTCAATTTT+TGG | + | chr1_2:21092066-21092085 | Msa0062020:intron | 60.0% |
| CCCAAAAATTGACGCGGCGC+GGG | - | chr1_2:21092070-21092089 | None:intergenic | 60.0% | |
| ! | CCCGCGCCGCGTCAATTTTT+GGG | + | chr1_2:21092067-21092086 | Msa0062020:intron | 60.0% |
| CCCCAAAAATTGACGCGGCG+CGG | - | chr1_2:21092071-21092090 | None:intergenic | 60.0% | |
| ! | CCGCGCCGCGTCAATTTTTG+GGG | + | chr1_2:21092068-21092087 | Msa0062020:intron | 60.0% |
| !! | CGCCGCGTCAATTTTTGGGG+TGG | + | chr1_2:21092071-21092090 | Msa0062020:intron | 60.0% |
| GTCAAAGCGGAAATGCGGCG+CGG | - | chr1_2:21092102-21092121 | None:intergenic | 60.0% | |
| GGGGGATGTGGTGTTCAAGG+TGG | - | chr1_2:21093853-21093872 | None:intergenic | 60.0% | |
| !! | CGACGACGGCGAGGTGTTGT+TGG | - | chr1_2:21086037-21086056 | None:intergenic | 65.0% |
| GAAATGGAGGGGGGCCGATG+GGG | + | chr1_2:21086698-21086717 | Msa0062020:intron | 65.0% | |
| AGAGGCCATGTGCACTGCGG+TGG | + | chr1_2:21088583-21088602 | Msa0062020:intron | 65.0% | |
| !!! | GCGGCCGCTTTTGACCGCAT+CGG | - | chr1_2:21091455-21091474 | None:intergenic | 65.0% |
| ! | CGCACCGCATCGGCGAAAAG+CGG | - | chr1_2:21091474-21091493 | None:intergenic | 65.0% |
| ! | CGCTTTTCGCCGATGCGGTG+CGG | + | chr1_2:21091472-21091491 | Msa0062020:intron | 65.0% |
| AATTGACGCGGCGCGGGATG+CGG | - | chr1_2:21092064-21092083 | None:intergenic | 65.0% | |
| ! | GGAGTTTGGGGCACACGCGC+CGG | - | chr1_2:21085994-21086013 | None:intergenic | 70.0% |
| CAACACCTCGCCGTCGTCGG+TGG | + | chr1_2:21086038-21086057 | Msa0062020:CDS | 70.0% | |
| GACGCCGTAAAGGCCGGCGA+GGG | - | chr1_2:21086169-21086188 | None:intergenic | 70.0% | |
| ! | CGCACCGGCCCAGTTCAACG+CGG | - | chr1_2:21091422-21091441 | None:intergenic | 70.0% |
| !!! | GCGGCCGCTTTTCGCCGATG+CGG | + | chr1_2:21091467-21091486 | Msa0062020:intron | 70.0% |
| TTCGCCGATGCGGTGCGGTC+TGG | + | chr1_2:21091477-21091496 | Msa0062020:intron | 70.0% | |
| TCGCCGATGCGGTGCGGTCT+GGG | + | chr1_2:21091478-21091497 | Msa0062020:intron | 70.0% | |
| GCTCCCAGACCGCACCGCAT+CGG | - | chr1_2:21091484-21091503 | None:intergenic | 70.0% | |
| GATGCGGTGCGGTCTGGGAG+CGG | + | chr1_2:21091483-21091502 | Msa0062020:intron | 70.0% | |
| ATTGACGCGGCGCGGGATGC+GGG | - | chr1_2:21092063-21092082 | None:intergenic | 70.0% | |
| ! | GTTTGGGGCACACGCGCCGG+TGG | - | chr1_2:21085991-21086010 | None:intergenic | 75.0% |
| ACCTCGCCGTCGTCGGTGGC+AGG | + | chr1_2:21086042-21086061 | Msa0062020:CDS | 75.0% | |
| ACCGCGCCTGCCACCGACGA+CGG | - | chr1_2:21086051-21086070 | None:intergenic | 75.0% | |
| GGCAGGCGCGGTGGTGAACG+CGG | + | chr1_2:21086059-21086078 | Msa0062020:CDS | 75.0% | |
| AGGCGCGGTGGTGAACGCGG+TGG | + | chr1_2:21086062-21086081 | Msa0062020:CDS | 75.0% | |
| CGACGCCGTAAAGGCCGGCG+AGG | - | chr1_2:21086170-21086189 | None:intergenic | 75.0% | |
| TATCGCGGGCGCGAAGCGGG+CGG | - | chr1_2:21091381-21091400 | None:intergenic | 75.0% | |
| CGCTATCGCGGGCGCGAAGC+GGG | - | chr1_2:21091384-21091403 | None:intergenic | 75.0% | |
| CCGCTATCGCGGGCGCGAAG+CGG | - | chr1_2:21091385-21091404 | None:intergenic | 75.0% | |
| CCGCTTCGCGCCCGCGATAG+CGG | + | chr1_2:21091382-21091401 | Msa0062020:intron | 75.0% | |
| GCGGGATGCGGGAGCGAAGC+GGG | - | chr1_2:21092052-21092071 | None:intergenic | 75.0% | |
| CGCGGGATGCGGGAGCGAAG+CGG | - | chr1_2:21092053-21092072 | None:intergenic | 75.0% | |
| AGCGGAAATGCGGCGCGGCG+CGG | - | chr1_2:21092097-21092116 | None:intergenic | 75.0% | |
| ! | GCCTGCCACCGACGACGGCG+AGG | - | chr1_2:21086046-21086065 | None:intergenic | 80.0% |
| ! | GCCGTCGTCGGTGGCAGGCG+CGG | + | chr1_2:21086047-21086066 | Msa0062020:CDS | 80.0% |
| ! | GTCGTCGGTGGCAGGCGCGG+TGG | + | chr1_2:21086050-21086069 | Msa0062020:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 21085874 | 21094537 | 21085874 | ID=Msa0062020;Name=Msa0062020 |
| chr1_2 | mRNA | 21085874 | 21094537 | 21085874 | ID=Msa0062020-mRNA-1;Parent=Msa0062020;Name=Msa0062020-mRNA-1;_AED=0.03;_eAED=0.03;_QI=156|1|1|1|1|1|11|448|297 |
| chr1_2 | exon | 21085874 | 21086206 | 21085874 | ID=Msa0062020-mRNA-1:exon:7850;Parent=Msa0062020-mRNA-1 |
| chr1_2 | exon | 21086344 | 21086434 | 21086344 | ID=Msa0062020-mRNA-1:exon:7851;Parent=Msa0062020-mRNA-1 |
| chr1_2 | exon | 21086556 | 21086608 | 21086556 | ID=Msa0062020-mRNA-1:exon:7852;Parent=Msa0062020-mRNA-1 |
| chr1_2 | exon | 21087632 | 21087724 | 21087632 | ID=Msa0062020-mRNA-1:exon:7853;Parent=Msa0062020-mRNA-1 |
| chr1_2 | exon | 21087855 | 21087926 | 21087855 | ID=Msa0062020-mRNA-1:exon:7854;Parent=Msa0062020-mRNA-1 |
| chr1_2 | exon | 21090538 | 21090610 | 21090538 | ID=Msa0062020-mRNA-1:exon:7855;Parent=Msa0062020-mRNA-1 |
| chr1_2 | exon | 21090709 | 21090754 | 21090709 | ID=Msa0062020-mRNA-1:exon:7856;Parent=Msa0062020-mRNA-1 |
| chr1_2 | exon | 21091269 | 21091332 | 21091269 | ID=Msa0062020-mRNA-1:exon:7857;Parent=Msa0062020-mRNA-1 |
| chr1_2 | exon | 21093500 | 21093553 | 21093500 | ID=Msa0062020-mRNA-1:exon:7858;Parent=Msa0062020-mRNA-1 |
| chr1_2 | exon | 21093637 | 21093714 | 21093637 | ID=Msa0062020-mRNA-1:exon:7859;Parent=Msa0062020-mRNA-1 |
| chr1_2 | exon | 21093997 | 21094537 | 21093997 | ID=Msa0062020-mRNA-1:exon:7860;Parent=Msa0062020-mRNA-1 |
| chr1_2 | five_prime_UTR | 21085874 | 21086029 | 21085874 | ID=Msa0062020-mRNA-1:five_prime_utr;Parent=Msa0062020-mRNA-1 |
| chr1_2 | CDS | 21086030 | 21086206 | 21086030 | ID=Msa0062020-mRNA-1:cds;Parent=Msa0062020-mRNA-1 |
| chr1_2 | CDS | 21086344 | 21086434 | 21086344 | ID=Msa0062020-mRNA-1:cds;Parent=Msa0062020-mRNA-1 |
| chr1_2 | CDS | 21086556 | 21086608 | 21086556 | ID=Msa0062020-mRNA-1:cds;Parent=Msa0062020-mRNA-1 |
| chr1_2 | CDS | 21087632 | 21087724 | 21087632 | ID=Msa0062020-mRNA-1:cds;Parent=Msa0062020-mRNA-1 |
| chr1_2 | CDS | 21087855 | 21087926 | 21087855 | ID=Msa0062020-mRNA-1:cds;Parent=Msa0062020-mRNA-1 |
| chr1_2 | CDS | 21090538 | 21090610 | 21090538 | ID=Msa0062020-mRNA-1:cds;Parent=Msa0062020-mRNA-1 |
| chr1_2 | CDS | 21090709 | 21090754 | 21090709 | ID=Msa0062020-mRNA-1:cds;Parent=Msa0062020-mRNA-1 |
| chr1_2 | CDS | 21091269 | 21091332 | 21091269 | ID=Msa0062020-mRNA-1:cds;Parent=Msa0062020-mRNA-1 |
| chr1_2 | CDS | 21093500 | 21093553 | 21093500 | ID=Msa0062020-mRNA-1:cds;Parent=Msa0062020-mRNA-1 |
| chr1_2 | CDS | 21093637 | 21093714 | 21093637 | ID=Msa0062020-mRNA-1:cds;Parent=Msa0062020-mRNA-1 |
| chr1_2 | CDS | 21093997 | 21094089 | 21093997 | ID=Msa0062020-mRNA-1:cds;Parent=Msa0062020-mRNA-1 |
| chr1_2 | three_prime_UTR | 21094090 | 21094537 | 21094090 | ID=Msa0062020-mRNA-1:three_prime_utr;Parent=Msa0062020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
