Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0605170 | KEH30380.1 | 88.966 | 290 | 29 | 1 | 1 | 290 | 34 | 320 | 5.38e-174 | 493 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0605170 | sp|Q9XII1|PDV2_ARATH | 43.925 | 321 | 132 | 9 | 2 | 290 | 3 | 307 | 9.65e-69 | 218 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013050 | Msa0605170 | -0.873755 | 1.150206e-67 | -8.615850e-47 |
| Msa0014410 | Msa0605170 | 0.808384 | 3.179660e-50 | -8.615850e-47 |
| Msa0020630 | Msa0605170 | 0.829881 | 4.015194e-55 | -8.615850e-47 |
| Msa0027540 | Msa0605170 | 0.806963 | 6.372255e-50 | -8.615850e-47 |
| Msa0030380 | Msa0605170 | 0.823224 | 1.553857e-53 | -8.615850e-47 |
| Msa0034560 | Msa0605170 | -0.801486 | 8.803761e-49 | -8.615850e-47 |
| Msa0038350 | Msa0605170 | -0.820302 | 7.369959e-53 | -8.615850e-47 |
| Msa0044710 | Msa0605170 | 0.874893 | 4.728889e-68 | -8.615850e-47 |
| Msa0046660 | Msa0605170 | -0.841887 | 3.618752e-58 | -8.615850e-47 |
| Msa0050720 | Msa0605170 | 0.814385 | 1.582708e-51 | -8.615850e-47 |
| Msa0050770 | Msa0605170 | 0.811349 | 7.321174e-51 | -8.615850e-47 |
| Msa0054730 | Msa0605170 | -0.856615 | 2.854889e-62 | -8.615850e-47 |
| Msa0071240 | Msa0605170 | 0.809828 | 1.559887e-50 | -8.615850e-47 |
| Msa0071530 | Msa0605170 | -0.827111 | 1.874146e-54 | -8.615850e-47 |
| Msa0075310 | Msa0605170 | 0.813439 | 2.558068e-51 | -8.615850e-47 |
| Msa0090770 | Msa0605170 | -0.838256 | 3.204724e-57 | -8.615850e-47 |
| Msa0106370 | Msa0605170 | -0.876578 | 1.248920e-68 | -8.615850e-47 |
| Msa0119850 | Msa0605170 | 0.842075 | 3.225625e-58 | -8.615850e-47 |
| Msa0605170 | Msa0607340 | -0.887303 | 1.607075e-72 | -8.615850e-47 |
| Msa0605170 | Msa0618010 | 0.813260 | 2.800307e-51 | -8.615850e-47 |
| Msa0605170 | Msa0625530 | -0.806215 | 9.166257e-50 | -8.615850e-47 |
| Msa0605170 | Msa0632870 | 0.801427 | 9.050188e-49 | -8.615850e-47 |
| Msa0605170 | Msa0637190 | -0.843157 | 1.664862e-58 | -8.615850e-47 |
| Msa0605170 | Msa0638280 | 0.809503 | 1.831961e-50 | -8.615850e-47 |
| Msa0605170 | Msa0638320 | 0.816423 | 5.572917e-52 | -8.615850e-47 |
| Msa0605170 | Msa0646640 | 0.897926 | 8.752250e-77 | -8.615850e-47 |
| Msa0605170 | Msa0647450 | -0.881367 | 2.546668e-70 | -8.615850e-47 |
| Msa0605170 | Msa0651400 | 0.818302 | 2.104439e-52 | -8.615850e-47 |
| Msa0605170 | Msa0655660 | -0.810895 | 9.180900e-51 | -8.615850e-47 |
| Msa0605170 | Msa0657050 | 0.811161 | 8.039859e-51 | -8.615850e-47 |
| Msa0605170 | Msa0657670 | 0.822398 | 2.420442e-53 | -8.615850e-47 |
| Msa0605170 | Msa0661190 | -0.850379 | 1.764011e-60 | -8.615850e-47 |
| Msa0605170 | Msa0669850 | 0.808794 | 2.600115e-50 | -8.615850e-47 |
| Msa0605170 | Msa0671740 | 0.804386 | 2.214455e-49 | -8.615850e-47 |
| Msa0605170 | Msa0672120 | 0.806862 | 6.692667e-50 | -8.615850e-47 |
| Msa0605170 | Msa0677270 | 0.813553 | 2.415289e-51 | -8.615850e-47 |
| Msa0605170 | Msa0677820 | 0.800288 | 1.545950e-48 | -8.615850e-47 |
| Msa0605170 | Msa0701030 | 0.829224 | 5.801272e-55 | -8.615850e-47 |
| Msa0605170 | Msa0705420 | 0.810409 | 1.169189e-50 | -8.615850e-47 |
| Msa0605170 | Msa0714600 | 0.831213 | 1.895743e-55 | -8.615850e-47 |
| Msa0605170 | Msa0734660 | 0.818340 | 2.062978e-52 | -8.615850e-47 |
| Msa0605170 | Msa0743260 | 0.809392 | 1.935522e-50 | -8.615850e-47 |
| Msa0605170 | Msa0743650 | 0.800689 | 1.281185e-48 | -8.615850e-47 |
| Msa0605170 | Msa0761800 | 0.829894 | 3.987715e-55 | -8.615850e-47 |
| Msa0605170 | Msa0769820 | -0.803871 | 2.834420e-49 | -8.615850e-47 |
| Msa0605170 | Msa0776220 | 0.814052 | 1.874931e-51 | -8.615850e-47 |
| Msa0605170 | Msa0779240 | 0.802385 | 5.754140e-49 | -8.615850e-47 |
| Msa0605170 | Msa0795920 | 0.814993 | 1.160741e-51 | -8.615850e-47 |
| Msa0605170 | Msa0804120 | 0.816071 | 6.681035e-52 | -8.615850e-47 |
| Msa0605170 | Msa0812760 | 0.815162 | 1.064625e-51 | -8.615850e-47 |
| Msa0605170 | Msa0813320 | -0.802035 | 6.791388e-49 | -8.615850e-47 |
| Msa0605170 | Msa0813670 | 0.829702 | 4.441390e-55 | -8.615850e-47 |
| Msa0605170 | Msa0813720 | 0.830380 | 3.034434e-55 | -8.615850e-47 |
| Msa0605170 | Msa0816640 | 0.817716 | 2.853935e-52 | -8.615850e-47 |
| Msa0605170 | Msa0828570 | 0.837578 | 4.785860e-57 | -8.615850e-47 |
| Msa0605170 | Msa0842210 | 0.864007 | 1.656584e-64 | -8.615850e-47 |
| Msa0605170 | Msa0847200 | 0.814162 | 1.773007e-51 | -8.615850e-47 |
| Msa0605170 | Msa0863770 | 0.803703 | 3.071763e-49 | -8.615850e-47 |
| Msa0605170 | Msa0865990 | -0.843568 | 1.293588e-58 | -8.615850e-47 |
| Msa0605170 | Msa0867050 | -0.846934 | 1.589304e-59 | -8.615850e-47 |
| Msa0605170 | Msa0870150 | 0.811521 | 6.716175e-51 | -8.615850e-47 |
| Msa0605170 | Msa0879010 | 0.827209 | 1.775545e-54 | -8.615850e-47 |
| Msa0605170 | Msa0909710 | 0.804331 | 2.274158e-49 | -8.615850e-47 |
| Msa0605170 | Msa0930460 | -0.818074 | 2.369664e-52 | -8.615850e-47 |
| Msa0605170 | Msa0938420 | 0.805086 | 1.581813e-49 | -8.615850e-47 |
| Msa0605170 | Msa0962190 | -0.803681 | 3.104227e-49 | -8.615850e-47 |
| Msa0605170 | Msa0967650 | -0.800555 | 1.364272e-48 | -8.615850e-47 |
| Msa0605170 | Msa0980500 | 0.809202 | 2.126239e-50 | -8.615850e-47 |
| Msa0605170 | Msa0992490 | -0.809493 | 1.841163e-50 | -8.615850e-47 |
| Msa0605170 | Msa1004210 | 0.809392 | 1.935410e-50 | -8.615850e-47 |
| Msa0605170 | Msa1004900 | -0.816279 | 6.001294e-52 | -8.615850e-47 |
| Msa0605170 | Msa1007610 | -0.815583 | 8.583522e-52 | -8.615850e-47 |
| Msa0605170 | Msa1012830 | 0.805518 | 1.284180e-49 | -8.615850e-47 |
| Msa0605170 | Msa1034360 | 0.804150 | 2.480609e-49 | -8.615850e-47 |
| Msa0605170 | Msa1036390 | 0.823370 | 1.436823e-53 | -8.615850e-47 |
| Msa0605170 | Msa1037000 | 0.807472 | 4.970773e-50 | -8.615850e-47 |
| Msa0605170 | Msa1038050 | 0.808105 | 3.647395e-50 | -8.615850e-47 |
| Msa0605170 | Msa1046610 | 0.820641 | 6.159730e-53 | -8.615850e-47 |
| Msa0605170 | Msa1072460 | -0.873456 | 1.449932e-67 | -8.615850e-47 |
| Msa0605170 | Msa1074060 | 0.801622 | 8.255402e-49 | -8.615850e-47 |
| Msa0605170 | Msa1076680 | 0.810693 | 1.015257e-50 | -8.615850e-47 |
| Msa0605170 | Msa1097210 | 0.802162 | 6.393167e-49 | -8.615850e-47 |
| Msa0605170 | Msa1111630 | 0.804251 | 2.362411e-49 | -8.615850e-47 |
| Msa0605170 | Msa1143930 | -0.836216 | 1.065385e-56 | -8.615850e-47 |
| Msa0605170 | Msa1157420 | -0.820035 | 8.483246e-53 | -8.615850e-47 |
| Msa0605170 | Msa1171690 | 0.808839 | 2.542965e-50 | -8.615850e-47 |
| Msa0605170 | Msa1187520 | 0.807497 | 4.910719e-50 | -8.615850e-47 |
| Msa0605170 | Msa1201430 | -0.822317 | 2.527034e-53 | -8.615850e-47 |
| Msa0605170 | Msa1204980 | -0.841863 | 3.671804e-58 | -8.615850e-47 |
| Msa0605170 | Msa1205010 | -0.844717 | 6.361343e-59 | -8.615850e-47 |
| Msa0605170 | Msa1217430 | -0.805214 | 1.487466e-49 | -8.615850e-47 |
| Msa0605170 | Msa1236640 | -0.800464 | 1.423578e-48 | -8.615850e-47 |
| Msa0605170 | Msa1249640 | -0.813535 | 2.437059e-51 | -8.615850e-47 |
| Msa0605170 | Msa1253930 | -0.805949 | 1.042594e-49 | -8.615850e-47 |
| Msa0605170 | Msa1254370 | -0.830182 | 3.390924e-55 | -8.615850e-47 |
| Msa0605170 | Msa1256540 | -0.842152 | 3.078189e-58 | -8.615850e-47 |
| Msa0605170 | Msa1260130 | 0.821857 | 3.229775e-53 | -8.615850e-47 |
| Msa0605170 | Msa1262920 | 0.804269 | 2.342251e-49 | -8.615850e-47 |
| Msa0605170 | Msa1265960 | 0.815847 | 7.495047e-52 | -8.615850e-47 |
| Msa0605170 | Msa1280130 | 0.802789 | 4.747566e-49 | -8.615850e-47 |
| Msa0605170 | Msa1282920 | 0.811924 | 5.488140e-51 | -8.615850e-47 |
| Msa0605170 | Msa1294610 | -0.815424 | 9.310773e-52 | -8.615850e-47 |
| Msa0605170 | Msa1296880 | 0.828856 | 7.124887e-55 | -8.615850e-47 |
| Msa0605170 | Msa1296960 | -0.841881 | 3.629858e-58 | -8.615850e-47 |
| Msa0605170 | Msa1300050 | 0.837876 | 4.011749e-57 | -8.615850e-47 |
| Msa0605170 | Msa1302100 | 0.808147 | 3.572417e-50 | -8.615850e-47 |
| Msa0605170 | Msa1302190 | -0.826496 | 2.627857e-54 | -8.615850e-47 |
| Msa0605170 | Msa1306800 | 0.810540 | 1.095582e-50 | -8.615850e-47 |
| Msa0605170 | Msa1307660 | -0.822242 | 2.631171e-53 | -8.615850e-47 |
| Msa0605170 | Msa1313050 | 0.805196 | 1.500164e-49 | -8.615850e-47 |
| Msa0605170 | Msa1316560 | -0.807978 | 3.880893e-50 | -8.615850e-47 |
| Msa0605170 | Msa1317030 | 0.801967 | 7.013539e-49 | -8.615850e-47 |
| Msa0605170 | Msa1322190 | 0.801343 | 9.414616e-49 | -8.615850e-47 |
| Msa0605170 | Msa1332040 | -0.804978 | 1.666195e-49 | -8.615850e-47 |
| Msa0605170 | Msa1335860 | 0.805971 | 1.031841e-49 | -8.615850e-47 |
| Msa0605170 | Msa1335970 | -0.841224 | 5.409468e-58 | -8.615850e-47 |
| Msa0605170 | Msa1347620 | 0.822013 | 2.972289e-53 | -8.615850e-47 |
| Msa0605170 | Msa1358610 | -0.801309 | 9.567192e-49 | -8.615850e-47 |
| Msa0605170 | Msa1365660 | 0.822802 | 1.949483e-53 | -8.615850e-47 |
| Msa0605170 | Msa1365700 | -0.812382 | 4.359585e-51 | -8.615850e-47 |
| Msa0605170 | Msa1369530 | 0.825578 | 4.341999e-54 | -8.615850e-47 |
| Msa0605170 | Msa1388790 | -0.826820 | 2.199703e-54 | -8.615850e-47 |
| Msa0605170 | Msa1391490 | 0.802847 | 4.619185e-49 | -8.615850e-47 |
| Msa0605170 | Msa1395230 | -0.872877 | 2.268948e-67 | -8.615850e-47 |
| Msa0605170 | Msa1396750 | -0.805694 | 1.179875e-49 | -8.615850e-47 |
| Msa0605170 | Msa1403930 | -0.830885 | 2.282207e-55 | -8.615850e-47 |
| Msa0605170 | Msa1410430 | -0.847254 | 1.298789e-59 | -8.615850e-47 |
| Msa0605170 | Msa1419800 | -0.810705 | 1.009330e-50 | -8.615850e-47 |
| Msa0605170 | Msa1421870 | 0.813903 | 2.022473e-51 | -8.615850e-47 |
| Msa0605170 | Msa1427830 | 0.813222 | 2.854718e-51 | -8.615850e-47 |
| Msa0605170 | Msa1431000 | 0.802343 | 5.867685e-49 | -8.615850e-47 |
| Msa0605170 | Msa1432400 | 0.827088 | 1.898036e-54 | -8.615850e-47 |
| Msa0605170 | Msa1439530 | 0.815535 | 8.795492e-52 | -8.615850e-47 |
| Msa0605170 | Msa1440610 | 0.815846 | 7.498619e-52 | -8.615850e-47 |
| Msa0605170 | Msa1449250 | -0.861581 | 9.280484e-64 | -8.615850e-47 |
| Msa0605170 | Msa1453780 | -0.869266 | 3.522194e-66 | -8.615850e-47 |
| Msa0605170 | Msa1454110 | 0.800586 | 1.344278e-48 | -8.615850e-47 |
| Msa0605170 | Msa1454910 | -0.859522 | 3.901639e-63 | -8.615850e-47 |
| Msa0129790 | Msa0605170 | -0.813274 | 2.780738e-51 | -8.615850e-47 |
| Msa0143140 | Msa0605170 | -0.811600 | 6.454704e-51 | -8.615850e-47 |
| Msa0156650 | Msa0605170 | -0.839689 | 1.363691e-57 | -8.615850e-47 |
| Msa0159750 | Msa0605170 | 0.825039 | 5.825060e-54 | -8.615850e-47 |
| Msa0162770 | Msa0605170 | -0.839063 | 1.982548e-57 | -8.615850e-47 |
| Msa0164360 | Msa0605170 | 0.808448 | 3.081993e-50 | -8.615850e-47 |
| Msa0168100 | Msa0605170 | 0.816065 | 6.700290e-52 | -8.615850e-47 |
| Msa0169140 | Msa0605170 | -0.827486 | 1.523613e-54 | -8.615850e-47 |
| Msa0173740 | Msa0605170 | 0.826578 | 2.511990e-54 | -8.615850e-47 |
| Msa0173820 | Msa0605170 | 0.823782 | 1.150976e-53 | -8.615850e-47 |
| Msa0173830 | Msa0605170 | 0.825153 | 5.473846e-54 | -8.615850e-47 |
| Msa0178350 | Msa0605170 | 0.800746 | 1.246964e-48 | -8.615850e-47 |
| Msa0182930 | Msa0605170 | 0.854997 | 8.473742e-62 | -8.615850e-47 |
| Msa0183640 | Msa0605170 | -0.828949 | 6.762771e-55 | -8.615850e-47 |
| Msa0185640 | Msa0605170 | -0.846883 | 1.641872e-59 | -8.615850e-47 |
| Msa0188930 | Msa0605170 | 0.812634 | 3.840482e-51 | -8.615850e-47 |
| Msa0197940 | Msa0605170 | -0.827172 | 1.811840e-54 | -8.615850e-47 |
| Msa0199730 | Msa0605170 | 0.802746 | 4.847718e-49 | -8.615850e-47 |
| Msa0200950 | Msa0605170 | -0.861670 | 8.714610e-64 | -8.615850e-47 |
| Msa0208630 | Msa0605170 | 0.805945 | 1.044930e-49 | -8.615850e-47 |
| Msa0218530 | Msa0605170 | -0.800550 | 1.367502e-48 | -8.615850e-47 |
| Msa0238070 | Msa0605170 | -0.804846 | 1.775687e-49 | -8.615850e-47 |
| Msa0238250 | Msa0605170 | -0.804622 | 1.977767e-49 | -8.615850e-47 |
| Msa0376510 | Msa0605170 | 0.804291 | 2.318232e-49 | -8.615850e-47 |
| Msa0377280 | Msa0605170 | 0.800259 | 1.567413e-48 | -8.615850e-47 |
| Msa0378080 | Msa0605170 | 0.808258 | 3.383670e-50 | -8.615850e-47 |
| Msa0380040 | Msa0605170 | 0.810364 | 1.196092e-50 | -8.615850e-47 |
| Msa0418430 | Msa0605170 | 0.815861 | 7.440830e-52 | -8.615850e-47 |
| Msa0421780 | Msa0605170 | -0.819331 | 1.228548e-52 | -8.615850e-47 |
| Msa0425050 | Msa0605170 | 0.804901 | 1.728811e-49 | -8.615850e-47 |
| Msa0425200 | Msa0605170 | -0.806925 | 6.490593e-50 | -8.615850e-47 |
| Msa0429290 | Msa0605170 | 0.807267 | 5.495822e-50 | -8.615850e-47 |
| Msa0430620 | Msa0605170 | 0.835952 | 1.243520e-56 | -8.615850e-47 |
| Msa0442850 | Msa0605170 | 0.840461 | 8.575797e-58 | -8.615850e-47 |
| Msa0459770 | Msa0605170 | -0.807420 | 5.098693e-50 | -8.615850e-47 |
| Msa0462590 | Msa0605170 | 0.834696 | 2.581152e-56 | -8.615850e-47 |
| Msa0465790 | Msa0605170 | 0.815758 | 7.844736e-52 | -8.615850e-47 |
| Msa0467900 | Msa0605170 | -0.842738 | 2.152726e-58 | -8.615850e-47 |
| Msa0467960 | Msa0605170 | -0.819181 | 1.329005e-52 | -8.615850e-47 |
| Msa0470180 | Msa0605170 | 0.810612 | 1.057259e-50 | -8.615850e-47 |
| Msa0472740 | Msa0605170 | 0.815604 | 8.489800e-52 | -8.615850e-47 |
| Msa0475580 | Msa0605170 | 0.818995 | 1.465330e-52 | -8.615850e-47 |
| Msa0240780 | Msa0605170 | 0.825462 | 4.626317e-54 | -8.615850e-47 |
| Msa0244270 | Msa0605170 | 0.819301 | 1.247943e-52 | -8.615850e-47 |
| Msa0258220 | Msa0605170 | -0.810872 | 9.285231e-51 | -8.615850e-47 |
| Msa0258670 | Msa0605170 | -0.877648 | 5.311259e-69 | -8.615850e-47 |
| Msa0259860 | Msa0605170 | -0.802466 | 5.537329e-49 | -8.615850e-47 |
| Msa0260950 | Msa0605170 | -0.861257 | 1.164960e-63 | -8.615850e-47 |
| Msa0271140 | Msa0605170 | 0.805942 | 1.046415e-49 | -8.615850e-47 |
| Msa0271960 | Msa0605170 | -0.804489 | 2.107456e-49 | -8.615850e-47 |
| Msa0275030 | Msa0605170 | 0.825054 | 5.778818e-54 | -8.615850e-47 |
| Msa0288240 | Msa0605170 | 0.835075 | 2.071773e-56 | -8.615850e-47 |
| Msa0288330 | Msa0605170 | 0.852841 | 3.541815e-61 | -8.615850e-47 |
| Msa0296160 | Msa0605170 | 0.807675 | 4.502572e-50 | -8.615850e-47 |
| Msa0312690 | Msa0605170 | -0.804034 | 2.622370e-49 | -8.615850e-47 |
| Msa0318250 | Msa0605170 | 0.856614 | 2.855238e-62 | -8.615850e-47 |
| Msa0318270 | Msa0605170 | 0.828881 | 7.024116e-55 | -8.615850e-47 |
| Msa0318310 | Msa0605170 | 0.819676 | 1.024887e-52 | -8.615850e-47 |
| Msa0326670 | Msa0605170 | 0.867401 | 1.406774e-65 | -8.615850e-47 |
| Msa0334570 | Msa0605170 | 0.813758 | 2.176728e-51 | -8.615850e-47 |
| Msa0342340 | Msa0605170 | -0.832363 | 9.868854e-56 | -8.615850e-47 |
| Msa0344830 | Msa0605170 | 0.821149 | 4.706143e-53 | -8.615850e-47 |
| Msa0356550 | Msa0605170 | -0.800840 | 1.193524e-48 | -8.615850e-47 |
| Msa0358170 | Msa0605170 | 0.822673 | 2.088228e-53 | -8.615850e-47 |
| Msa0490350 | Msa0605170 | 0.816796 | 4.597945e-52 | -8.615850e-47 |
| Msa0501800 | Msa0605170 | 0.805261 | 1.453853e-49 | -8.615850e-47 |
| Msa0504020 | Msa0605170 | 0.824815 | 6.579369e-54 | -8.615850e-47 |
| Msa0508200 | Msa0605170 | 0.808522 | 2.971401e-50 | -8.615850e-47 |
| Msa0516510 | Msa0605170 | -0.801619 | 8.266067e-49 | -8.615850e-47 |
| Msa0518040 | Msa0605170 | 0.813017 | 3.166183e-51 | -8.615850e-47 |
| Msa0519220 | Msa0605170 | 0.810341 | 1.209641e-50 | -8.615850e-47 |
| Msa0524890 | Msa0605170 | -0.804031 | 2.625535e-49 | -8.615850e-47 |
| Msa0526640 | Msa0605170 | -0.803774 | 2.968975e-49 | -8.615850e-47 |
| Msa0531990 | Msa0605170 | -0.804680 | 1.923465e-49 | -8.615850e-47 |
| Msa0532100 | Msa0605170 | -0.807292 | 5.428686e-50 | -8.615850e-47 |
| Msa0535030 | Msa0605170 | 0.825617 | 4.250457e-54 | -8.615850e-47 |
| Msa0535060 | Msa0605170 | 0.829161 | 6.008906e-55 | -8.615850e-47 |
| Msa0540070 | Msa0605170 | 0.861014 | 1.381333e-63 | -8.615850e-47 |
| Msa0553220 | Msa0605170 | -0.882204 | 1.267013e-70 | -8.615850e-47 |
| Msa0564930 | Msa0605170 | 0.817534 | 3.136937e-52 | -8.615850e-47 |
| Msa0577460 | Msa0605170 | 0.806368 | 8.510372e-50 | -8.615850e-47 |
| Msa0577810 | Msa0605170 | 0.815803 | 7.667193e-52 | -8.615850e-47 |
| Msa0578070 | Msa0605170 | -0.809171 | 2.158978e-50 | -8.615850e-47 |
| Msa0579390 | Msa0605170 | 0.804135 | 2.498550e-49 | -8.615850e-47 |
| Msa0585000 | Msa0605170 | -0.863810 | 1.908348e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0605170 | MtrunA17_Chr4g0034331 | 88.966 | 290 | 29 | 1 | 1 | 290 | 34 | 320 | 4.95e-178 | 493 |
| Msa0605170 | MtrunA17_Chr2g0305561 | 95.455 | 154 | 7 | 0 | 137 | 290 | 1 | 154 | 1.68e-106 | 306 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0605170 | AT2G16070.2 | 43.925 | 321 | 132 | 9 | 2 | 290 | 3 | 307 | 9.80e-70 | 218 |
| Msa0605170 | AT2G16070.3 | 47.805 | 205 | 90 | 6 | 90 | 290 | 33 | 224 | 3.05e-50 | 166 |
| Msa0605170 | AT2G16070.1 | 47.805 | 205 | 90 | 6 | 90 | 290 | 33 | 224 | 3.05e-50 | 166 |
Find 82 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGATTACTGGTCAATATTT+AGG | 0.178796 | 4_2:-50916039 | Msa0605170:three_prime_UTR |
| CAACGAACCTTCTGCAAATT+AGG | 0.192387 | 4_2:+50916407 | None:intergenic |
| GAGATCTACCACTGAAAATA+AGG | 0.238835 | 4_2:-50916342 | Msa0605170:CDS |
| CCACATCCATAGTTTATATC+AGG | 0.316941 | 4_2:+50916212 | None:intergenic |
| GTTGCAGCAACAGCTGAAAA+TGG | 0.342115 | 4_2:+50916236 | None:intergenic |
| GGAGTATAAAGGAAAAGATT+TGG | 0.355923 | 4_2:-50916768 | Msa0605170:CDS |
| AAAATTAAAACATAAAATAA+GGG | 0.363954 | 4_2:+50916139 | None:intergenic |
| TTGCGATGCACTCGAAGCTT+TGG | 0.365771 | 4_2:-50918620 | Msa0605170:CDS |
| GTGTCCACCTGGTAGAGTTT+TGG | 0.371016 | 4_2:-50916309 | Msa0605170:CDS |
| GCAACACCTGATATAAACTA+TGG | 0.384435 | 4_2:-50916218 | Msa0605170:CDS |
| ATATTGAGTATGTCAGGATT+TGG | 0.388003 | 4_2:-50916431 | Msa0605170:CDS |
| AATAAGCTCAAGGAGTATAA+AGG | 0.395809 | 4_2:-50916779 | Msa0605170:CDS |
| TATGGAGGGCGGGTTGGATA+AGG | 0.395815 | 4_2:+50916677 | None:intergenic |
| TCTTCTTGTGATTCGCTGCT+AGG | 0.396101 | 4_2:+50918812 | None:intergenic |
| GGTTGGCTCCACTGTTTCAC+TGG | 0.400114 | 4_2:+50916718 | None:intergenic |
| TGAGTGATTGGCATGATTAC+TGG | 0.401255 | 4_2:-50916051 | Msa0605170:three_prime_UTR |
| CGCAATTAAACACGCATATG+TGG | 0.401638 | 4_2:+50915899 | None:intergenic |
| CACTGTTTCACTGGCAAAAG+TGG | 0.402405 | 4_2:+50916727 | None:intergenic |
| TATTGTAGTAGCTGAGTGAT+TGG | 0.403929 | 4_2:-50916063 | Msa0605170:three_prime_UTR |
| GACTCAGCTTTCTTCTCTGC+AGG | 0.413910 | 4_2:-50918596 | Msa0605170:intron |
| CATATGTGGGTAAATATCAT+AGG | 0.420229 | 4_2:+50915913 | None:intergenic |
| AAACCAACTTCTTCTCCTAA+TGG | 0.424275 | 4_2:-50918694 | Msa0605170:CDS |
| TCGTCTTCGAGGAGACCATT+AGG | 0.426806 | 4_2:+50918679 | None:intergenic |
| CCTCGTCTTCATCGTCTTCG+AGG | 0.427640 | 4_2:+50918668 | None:intergenic |
| CAATGGAAGAGGAAGGAATA+GGG | 0.432772 | 4_2:-50918771 | Msa0605170:CDS |
| TTGTCAAGAGACATGGAATA+TGG | 0.435035 | 4_2:+50916659 | None:intergenic |
| TATTTGCATTGTCTTGTACT+TGG | 0.442415 | 4_2:-50918888 | Msa0605170:five_prime_UTR |
| ACAATGGAAGAGGAAGGAAT+AGG | 0.454566 | 4_2:-50918772 | Msa0605170:CDS |
| AGCAAAATCATGTTGAAGAC+GGG | 0.457681 | 4_2:-50916535 | Msa0605170:CDS |
| AAAGCAGTGCTCACAGTTGT+TGG | 0.459690 | 4_2:-50916464 | Msa0605170:CDS |
| CACAGACTAGAAAATGAGAA+TGG | 0.463269 | 4_2:-50916365 | Msa0605170:CDS |
| AGGAGGAAGTAGTAGATCAT+TGG | 0.467708 | 4_2:+50916697 | None:intergenic |
| CGTGTTTAATTGCGCTTATG+TGG | 0.476934 | 4_2:-50915890 | Msa0605170:three_prime_UTR |
| ATGGAATATGGAGGGCGGGT+TGG | 0.479831 | 4_2:+50916671 | None:intergenic |
| ATCCCTTCTGTCAATAAGTC+CGG | 0.488206 | 4_2:-50916620 | Msa0605170:CDS |
| ACAAGACAATGCAAATATCA+TGG | 0.493274 | 4_2:+50918894 | None:intergenic |
| GTCAATAAGTCCGGTCGCAA+TGG | 0.494855 | 4_2:-50916611 | Msa0605170:CDS |
| GTATCAATATTGAGTATGTC+AGG | 0.496740 | 4_2:-50916437 | Msa0605170:CDS |
| TAGCGAGAGCCACAGAACTT+AGG | 0.501152 | 4_2:-50918741 | Msa0605170:CDS |
| GGAGGGCGGGTTGGATAAGG+AGG | 0.511572 | 4_2:+50916680 | None:intergenic |
| AAGACGAGGATGCTACTGAT+AGG | 0.511739 | 4_2:-50918654 | Msa0605170:CDS |
| CACACTTGATAATGTGATTG+AGG | 0.511821 | 4_2:-50916582 | Msa0605170:CDS |
| CTAATTTGCAGAAGGTTCGT+TGG | 0.524180 | 4_2:-50916406 | Msa0605170:CDS |
| GAAGAAAACAACAATGGAAG+AGG | 0.530891 | 4_2:-50918782 | Msa0605170:exon |
| ACAGACTAGAAAATGAGAAT+GGG | 0.537258 | 4_2:-50916364 | Msa0605170:CDS |
| AGACCATTAGGAGAAGAAGT+TGG | 0.538405 | 4_2:+50918691 | None:intergenic |
| GATCTTCAACCTAAGTTCTG+TGG | 0.541601 | 4_2:+50918732 | None:intergenic |
| AGATCTACCACTGAAAATAA+GGG | 0.549200 | 4_2:-50916341 | Msa0605170:CDS |
| CGACCGGACTTATTGACAGA+AGG | 0.550670 | 4_2:+50916617 | None:intergenic |
| CTCGATGTCTCGTGAAAGAG+AGG | 0.553753 | 4_2:-50916268 | Msa0605170:CDS |
| ACCACTGAAAATAAGGGTGA+TGG | 0.554032 | 4_2:-50916335 | Msa0605170:CDS |
| AGACATGGAATATGGAGGGC+GGG | 0.557062 | 4_2:+50916667 | None:intergenic |
| GGTGATGGACAGTGTCCACC+TGG | 0.562228 | 4_2:-50916320 | Msa0605170:CDS |
| TCCAGCACCAAAACTCTACC+AGG | 0.564759 | 4_2:+50916302 | None:intergenic |
| ATTTGGTCCTAATTTGCAGA+AGG | 0.566190 | 4_2:-50916414 | Msa0605170:CDS |
| ATATACAATGAGGAGAACTA+AGG | 0.569170 | 4_2:+50916179 | None:intergenic |
| GAGCAAAATCATGTTGAAGA+CGG | 0.571685 | 4_2:-50916536 | Msa0605170:CDS |
| CCTGATATAAACTATGGATG+TGG | 0.573675 | 4_2:-50916212 | Msa0605170:CDS |
| TGTGATTAATCCATTGCGAC+CGG | 0.579636 | 4_2:+50916601 | None:intergenic |
| AAATTAAAACATAAAATAAG+GGG | 0.580436 | 4_2:+50916140 | None:intergenic |
| AGTGCTAATTAATAAGCTCA+AGG | 0.585821 | 4_2:-50916789 | Msa0605170:CDS |
| TCAAGAGACATGGAATATGG+AGG | 0.598159 | 4_2:+50916662 | None:intergenic |
| GTGTTTAATTGCGCTTATGT+GGG | 0.601070 | 4_2:-50915889 | None:intergenic |
| AAAACAACAATGGAAGAGGA+AGG | 0.601648 | 4_2:-50918778 | Msa0605170:exon |
| GACCGGACTTATTGACAGAA+GGG | 0.606790 | 4_2:+50916618 | None:intergenic |
| GCAATTAAACACGCATATGT+GGG | 0.609420 | 4_2:+50915900 | None:intergenic |
| ATATTGCTTGTCAAGAGACA+TGG | 0.613371 | 4_2:+50916652 | None:intergenic |
| ATACGAAAGAGAAATTGCCT+TGG | 0.615830 | 4_2:-50916835 | Msa0605170:CDS |
| CAAGAGACATGGAATATGGA+GGG | 0.618949 | 4_2:+50916663 | None:intergenic |
| AGTATAGAAGAAAACAACAA+TGG | 0.619780 | 4_2:-50918788 | Msa0605170:exon |
| GGAAGTAGTAGATCATTGGT+TGG | 0.626172 | 4_2:+50916701 | None:intergenic |
| TTCGTTGGAATGTACAACGC+AGG | 0.626741 | 4_2:-50916391 | Msa0605170:CDS |
| TTTGGTGCTGGAAAATGGGG+AGG | 0.629531 | 4_2:-50916291 | Msa0605170:CDS |
| CCTCGAAGACGATGAAGACG+AGG | 0.637956 | 4_2:-50918668 | Msa0605170:CDS |
| AATTAAAACATAAAATAAGG+GGG | 0.653421 | 4_2:+50916141 | None:intergenic |
| GAGACATGGAATATGGAGGG+CGG | 0.660233 | 4_2:+50916666 | None:intergenic |
| GCAAAATCATGTTGAAGACG+GGG | 0.661988 | 4_2:-50916534 | Msa0605170:CDS |
| ATTTAGGTAAGTGATGCAGA+TGG | 0.664359 | 4_2:-50916023 | Msa0605170:three_prime_UTR |
| GAGTGAAATGATATACAATG+AGG | 0.664799 | 4_2:+50916169 | None:intergenic |
| AGTGCTCACAGTTGTTGGTG+TGG | 0.679889 | 4_2:-50916459 | Msa0605170:CDS |
| AGCACCAAAACTCTACCAGG+TGG | 0.702063 | 4_2:+50916305 | None:intergenic |
| TCGATGTCTCGTGAAAGAGA+GGG | 0.703822 | 4_2:-50916267 | Msa0605170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAAACATAAAATAAG+GGG | + | chr4_2:50918663-50918682 | None:intergenic | 10.0% |
| !!! | TTTTTCAATTTCTTTTAAGA+TGG | - | chr4_2:50917771-50917790 | Msa0605170:intron | 15.0% |
| !! | AAAATATTCAAAACATGATT+GGG | - | chr4_2:50917883-50917902 | Msa0605170:intron | 15.0% |
| !! | AATTAAAACATAAAATAAGG+GGG | + | chr4_2:50918662-50918681 | None:intergenic | 15.0% |
| !!! | TTTTAATTCCATTTTTGTTT+TGG | - | chr4_2:50918704-50918723 | Msa0605170:CDS | 15.0% |
| !! | TAAAACTAGTTACAATATGT+AGG | + | chr4_2:50916561-50916580 | None:intergenic | 20.0% |
| !! | AGAGTTAATTCAAAATTTGA+CGG | - | chr4_2:50916736-50916755 | Msa0605170:CDS | 20.0% |
| !!! | TAGGATTTTAGGATTAAAAT+CGG | + | chr4_2:50917087-50917106 | None:intergenic | 20.0% |
| !!! | GTATACACAAAATCTTATTT+TGG | - | chr4_2:50917143-50917162 | Msa0605170:intron | 20.0% |
| !! | AGAATTGTTACATTAATAGT+AGG | + | chr4_2:50917525-50917544 | None:intergenic | 20.0% |
| !!! | ATTTTACGTTTAATTGGTAA+GGG | + | chr4_2:50917568-50917587 | None:intergenic | 20.0% |
| !! | GAAAATATTCAAAACATGAT+TGG | - | chr4_2:50917882-50917901 | Msa0605170:intron | 20.0% |
| !! | CTGTAAATACATACAATATT+AGG | + | chr4_2:50917925-50917944 | None:intergenic | 20.0% |
| !! | CTAATATTGTATGTATTTAC+AGG | - | chr4_2:50917923-50917942 | Msa0605170:intron | 20.0% |
| !!! | CTTTGTTTGTTAGTTTTCTT+CGG | + | chr4_2:50915944-50915963 | None:intergenic | 25.0% |
| ! | AGTATAGAAGAAAACAACAA+TGG | - | chr4_2:50916012-50916031 | Msa0605170:three_prime_UTR | 25.0% |
| ! | AAACCCAGTTAATCAAATTT+GGG | + | chr4_2:50916240-50916259 | None:intergenic | 25.0% |
| ! | AAAACCCAGTTAATCAAATT+TGG | + | chr4_2:50916241-50916260 | None:intergenic | 25.0% |
| !!! | TATTGTAACTAGTTTTACGA+TGG | - | chr4_2:50916564-50916583 | Msa0605170:CDS | 25.0% |
| ! | GAAACCTAAAATAAATGTAC+CGG | + | chr4_2:50916608-50916627 | None:intergenic | 25.0% |
| ! | TGAAACCTAAAATAAGTGTA+AGG | - | chr4_2:50916803-50916822 | Msa0605170:CDS | 25.0% |
| ! | GAAACCTAAAATAAGTGTAA+GGG | - | chr4_2:50916804-50916823 | Msa0605170:CDS | 25.0% |
| !! | GATATATTGATTGACGATAA+AGG | + | chr4_2:50916848-50916867 | None:intergenic | 25.0% |
| ! | TTGAAACGATTCTACAATTA+TGG | - | chr4_2:50917192-50917211 | Msa0605170:intron | 25.0% |
| ! | TAAATTACACTTGAAATGCT+TGG | + | chr4_2:50917426-50917445 | None:intergenic | 25.0% |
| !! | AGCATTTCAAGTGTAATTTA+AGG | - | chr4_2:50917426-50917445 | Msa0605170:intron | 25.0% |
| ! | CATATAAAATACCATAGGTA+AGG | + | chr4_2:50917460-50917479 | None:intergenic | 25.0% |
| ! | ACATGCATATAAAATACCAT+AGG | + | chr4_2:50917465-50917484 | None:intergenic | 25.0% |
| !! | TTTTACGTTTAATTGGTAAG+GGG | + | chr4_2:50917567-50917586 | None:intergenic | 25.0% |
| !! | GATTTTACGTTTAATTGGTA+AGG | + | chr4_2:50917569-50917588 | None:intergenic | 25.0% |
| !! | ACTTGTTGAACACTAATTAT+GGG | - | chr4_2:50917655-50917674 | Msa0605170:intron | 25.0% |
| !! | CATTGTTTGGTTTATATTGT+TGG | - | chr4_2:50917818-50917837 | Msa0605170:intron | 25.0% |
| !!! | AGATTTTATTGTTGTTGCTA+TGG | - | chr4_2:50917859-50917878 | Msa0605170:intron | 25.0% |
| !!! | GATTTTATTGTTGTTGCTAT+GGG | - | chr4_2:50917860-50917879 | Msa0605170:intron | 25.0% |
| !!! | TGATTTTGCTCTTTTTCATT+TGG | + | chr4_2:50918255-50918274 | None:intergenic | 25.0% |
| !!! | TAATTCCATTTTTGTTTTGG+TGG | - | chr4_2:50918707-50918726 | Msa0605170:CDS | 25.0% |
| ! | ATGATTACTGGTCAATATTT+AGG | - | chr4_2:50918761-50918780 | Msa0605170:CDS | 25.0% |
| !!! | AGATGGTCGTTTATTTTTAA+AGG | - | chr4_2:50918794-50918813 | Msa0605170:five_prime_UTR | 25.0% |
| !!! | GATGGTCGTTTATTTTTAAA+GGG | - | chr4_2:50918795-50918814 | Msa0605170:five_prime_UTR | 25.0% |
| ACAAGACAATGCAAATATCA+TGG | + | chr4_2:50915909-50915928 | None:intergenic | 30.0% | |
| TATTTGCATTGTCTTGTACT+TGG | - | chr4_2:50915912-50915931 | Msa0605170:three_prime_UTR | 30.0% | |
| AGATTTGACCCATTATTATG+AGG | - | chr4_2:50916280-50916299 | Msa0605170:CDS | 30.0% | |
| AAATCCAGCCTCATAATAAT+GGG | + | chr4_2:50916291-50916310 | None:intergenic | 30.0% | |
| TAAATCCAGCCTCATAATAA+TGG | + | chr4_2:50916292-50916311 | None:intergenic | 30.0% | |
| GTTAAGTGTTTCATACAAAG+AGG | + | chr4_2:50916352-50916371 | None:intergenic | 30.0% | |
| !! | AACATTTAGGTTTAGGTTGA+AGG | + | chr4_2:50916479-50916498 | None:intergenic | 30.0% |
| TTCAACCTAAACCTAAATGT+TGG | - | chr4_2:50916478-50916497 | Msa0605170:CDS | 30.0% | |
| CTTAATTGCTACCAACATTT+AGG | + | chr4_2:50916492-50916511 | None:intergenic | 30.0% | |
| CTTGTCCGAATTAAATAATG+CGG | - | chr4_2:50916521-50916540 | Msa0605170:CDS | 30.0% | |
| ACTCACCGCATTATTTAATT+CGG | + | chr4_2:50916529-50916548 | None:intergenic | 30.0% | |
| !! | TAGTCCGGTACATTTATTTT+AGG | - | chr4_2:50916601-50916620 | Msa0605170:CDS | 30.0% |
| TCAAAATTTGACGGAATTGA+TGG | - | chr4_2:50916745-50916764 | Msa0605170:CDS | 30.0% | |
| !! | TAGTCCCTTACACTTATTTT+AGG | + | chr4_2:50916811-50916830 | None:intergenic | 30.0% |
| TTCAAATTGAGTAATTGCCA+GGG | + | chr4_2:50916914-50916933 | None:intergenic | 30.0% | |
| TTTCAAATTGAGTAATTGCC+AGG | + | chr4_2:50916915-50916934 | None:intergenic | 30.0% | |
| AATACTACTTGTAAGCATGA+TGG | - | chr4_2:50917053-50917072 | Msa0605170:intron | 30.0% | |
| AAGTATAATCGCAAAATCGT+AGG | + | chr4_2:50917106-50917125 | None:intergenic | 30.0% | |
| !! | CAAAGAAAAGTGGATTATAC+AGG | + | chr4_2:50917175-50917194 | None:intergenic | 30.0% |
| AGAATCGTTTCAAAGAAAAG+TGG | + | chr4_2:50917185-50917204 | None:intergenic | 30.0% | |
| ! | ATCGGGATTTTACGTTTAAT+TGG | + | chr4_2:50917574-50917593 | None:intergenic | 30.0% |
| CCAAAAAAGCAAAAATGACA+AGG | + | chr4_2:50917621-50917640 | None:intergenic | 30.0% | |
| !!! | CCTTGTCATTTTTGCTTTTT+TGG | - | chr4_2:50917618-50917637 | Msa0605170:intron | 30.0% |
| !! | GACTTGTTGAACACTAATTA+TGG | - | chr4_2:50917654-50917673 | Msa0605170:intron | 30.0% |
| CAGTACATTATGTCATTGTT+TGG | - | chr4_2:50917805-50917824 | Msa0605170:intron | 30.0% | |
| AGTGCTAATTAATAAGCTCA+AGG | - | chr4_2:50918011-50918030 | Msa0605170:intron | 30.0% | |
| ! | AATAAGCTCAAGGAGTATAA+AGG | - | chr4_2:50918021-50918040 | Msa0605170:intron | 30.0% |
| GGAGTATAAAGGAAAAGATT+TGG | - | chr4_2:50918032-50918051 | Msa0605170:intron | 30.0% | |
| GTATCAATATTGAGTATGTC+AGG | - | chr4_2:50918363-50918382 | Msa0605170:intron | 30.0% | |
| ATATTGAGTATGTCAGGATT+TGG | - | chr4_2:50918369-50918388 | Msa0605170:intron | 30.0% | |
| ACAGACTAGAAAATGAGAAT+GGG | - | chr4_2:50918436-50918455 | Msa0605170:intron | 30.0% | |
| AGATCTACCACTGAAAATAA+GGG | - | chr4_2:50918459-50918478 | Msa0605170:intron | 30.0% | |
| ATATACAATGAGGAGAACTA+AGG | + | chr4_2:50918624-50918643 | None:intergenic | 30.0% | |
| GAGTGAAATGATATACAATG+AGG | + | chr4_2:50918634-50918653 | None:intergenic | 30.0% | |
| ATCAACCACCAAAACAAAAA+TGG | + | chr4_2:50918715-50918734 | None:intergenic | 30.0% | |
| CATATGTGGGTAAATATCAT+AGG | + | chr4_2:50918890-50918909 | None:intergenic | 30.0% | |
| GAAGAAAACAACAATGGAAG+AGG | - | chr4_2:50916018-50916037 | Msa0605170:three_prime_UTR | 35.0% | |
| AAAACAACAATGGAAGAGGA+AGG | - | chr4_2:50916022-50916041 | Msa0605170:three_prime_UTR | 35.0% | |
| !!! | TAGGAGAAGAAGTTGGTTTT+TGG | + | chr4_2:50916105-50916124 | None:intergenic | 35.0% |
| AAACCAACTTCTTCTCCTAA+TGG | - | chr4_2:50916106-50916125 | Msa0605170:three_prime_UTR | 35.0% | |
| CCAGTTAATCAAATTTGGGA+GGG | + | chr4_2:50916236-50916255 | None:intergenic | 35.0% | |
| CCTCCCAAATTTGATTAACT+GGG | - | chr4_2:50916234-50916253 | Msa0605170:CDS | 35.0% | |
| GTGTTTCATACAAAGAGGTA+AGG | + | chr4_2:50916347-50916366 | None:intergenic | 35.0% | |
| CTTAATATCAGTGTCATGTC+TGG | + | chr4_2:50916386-50916405 | None:intergenic | 35.0% | |
| TGTCATATAAGTAGCGTCAT+AGG | - | chr4_2:50916432-50916451 | Msa0605170:CDS | 35.0% | |
| ! | TGCTACCAACATTTAGGTTT+AGG | + | chr4_2:50916486-50916505 | None:intergenic | 35.0% |
| GCTAAATTGCATGTTTAGTC+CGG | - | chr4_2:50916586-50916605 | Msa0605170:CDS | 35.0% | |
| TACTGACATCAGTAACGTAA+AGG | - | chr4_2:50916773-50916792 | Msa0605170:CDS | 35.0% | |
| ! | TATTTTTCTCACTCTAACCC+TGG | - | chr4_2:50916894-50916913 | Msa0605170:intron | 35.0% |
| ! | TCGCAAAATCGTAGGATTTT+AGG | + | chr4_2:50917098-50917117 | None:intergenic | 35.0% |
| TGTATACCCATAATCGCTAA+GGG | + | chr4_2:50917130-50917149 | None:intergenic | 35.0% | |
| !!! | AGGTTTTTTTGCCTTACCTA+TGG | - | chr4_2:50917446-50917465 | Msa0605170:intron | 35.0% |
| ACAAGCAAGGTAGTCAAAAT+CGG | + | chr4_2:50917592-50917611 | None:intergenic | 35.0% | |
| AAAATTCACAAAGCAACCGA+CGG | + | chr4_2:50917755-50917774 | None:intergenic | 35.0% | |
| ATACGAAAGAGAAATTGCCT+TGG | - | chr4_2:50917965-50917984 | Msa0605170:intron | 35.0% | |
| TTGTCAAGAGACATGGAATA+TGG | + | chr4_2:50918144-50918163 | None:intergenic | 35.0% | |
| ATATTGCTTGTCAAGAGACA+TGG | + | chr4_2:50918151-50918170 | None:intergenic | 35.0% | |
| !! | CACACTTGATAATGTGATTG+AGG | - | chr4_2:50918218-50918237 | Msa0605170:intron | 35.0% |
| GAGCAAAATCATGTTGAAGA+CGG | - | chr4_2:50918264-50918283 | Msa0605170:intron | 35.0% | |
| AGCAAAATCATGTTGAAGAC+GGG | - | chr4_2:50918265-50918284 | Msa0605170:intron | 35.0% | |
| GGGGCTAAAAATTCAAGAAA+AGG | - | chr4_2:50918285-50918304 | Msa0605170:intron | 35.0% | |
| ! | ATTTGGTCCTAATTTGCAGA+AGG | - | chr4_2:50918386-50918405 | Msa0605170:intron | 35.0% |
| CACAGACTAGAAAATGAGAA+TGG | - | chr4_2:50918435-50918454 | Msa0605170:intron | 35.0% | |
| GAGATCTACCACTGAAAATA+AGG | - | chr4_2:50918458-50918477 | Msa0605170:intron | 35.0% | |
| GCAACACCTGATATAAACTA+TGG | - | chr4_2:50918582-50918601 | Msa0605170:intron | 35.0% | |
| CCACATCCATAGTTTATATC+AGG | + | chr4_2:50918591-50918610 | None:intergenic | 35.0% | |
| CCTGATATAAACTATGGATG+TGG | - | chr4_2:50918588-50918607 | Msa0605170:intron | 35.0% | |
| AACATAAAATAAGGGGGCAA+AGG | + | chr4_2:50918656-50918675 | None:intergenic | 35.0% | |
| TATTGTAGTAGCTGAGTGAT+TGG | - | chr4_2:50918737-50918756 | Msa0605170:CDS | 35.0% | |
| ATTTAGGTAAGTGATGCAGA+TGG | - | chr4_2:50918777-50918796 | Msa0605170:exon | 35.0% | |
| GCTCTTGACTAAAAAGCAAT+GGG | + | chr4_2:50918848-50918867 | None:intergenic | 35.0% | |
| TGCTCTTGACTAAAAAGCAA+TGG | + | chr4_2:50918849-50918868 | None:intergenic | 35.0% | |
| GCAATTAAACACGCATATGT+GGG | + | chr4_2:50918903-50918922 | None:intergenic | 35.0% | |
| ACAATGGAAGAGGAAGGAAT+AGG | - | chr4_2:50916028-50916047 | Msa0605170:three_prime_UTR | 40.0% | |
| CAATGGAAGAGGAAGGAATA+GGG | - | chr4_2:50916029-50916048 | Msa0605170:three_prime_UTR | 40.0% | |
| GATCTTCAACCTAAGTTCTG+TGG | + | chr4_2:50916071-50916090 | None:intergenic | 40.0% | |
| AGACCATTAGGAGAAGAAGT+TGG | + | chr4_2:50916112-50916131 | None:intergenic | 40.0% | |
| CCCTCCCAAATTTGATTAAC+TGG | - | chr4_2:50916233-50916252 | Msa0605170:CDS | 40.0% | |
| CCCAGTTAATCAAATTTGGG+AGG | + | chr4_2:50916237-50916256 | None:intergenic | 40.0% | |
| TTGACCCATTATTATGAGGC+TGG | - | chr4_2:50916284-50916303 | Msa0605170:CDS | 40.0% | |
| !! | TCATAGGAGTGTTGAACACT+TGG | - | chr4_2:50916448-50916467 | Msa0605170:CDS | 40.0% |
| AGTCACGTGGATGTTTCAAA+CGG | + | chr4_2:50916687-50916706 | None:intergenic | 40.0% | |
| GGAAAATCATATTCGTGTCG+TGG | + | chr4_2:50916993-50917012 | None:intergenic | 40.0% | |
| ATACTTGCCCTTAGCGATTA+TGG | - | chr4_2:50917120-50917139 | Msa0605170:intron | 40.0% | |
| TACTTGCCCTTAGCGATTAT+GGG | - | chr4_2:50917121-50917140 | Msa0605170:intron | 40.0% | |
| GTGTATACCCATAATCGCTA+AGG | + | chr4_2:50917131-50917150 | None:intergenic | 40.0% | |
| CGATTCTACAATTATGGTCG+CGG | - | chr4_2:50917198-50917217 | Msa0605170:intron | 40.0% | |
| CAAGCAAGGTAGTCAAAATC+GGG | + | chr4_2:50917591-50917610 | None:intergenic | 40.0% | |
| GTGTTCAACAAGTCTCAGAT+AGG | + | chr4_2:50917648-50917667 | None:intergenic | 40.0% | |
| AATGTTCAAATTCCAGGTGG+GGG | + | chr4_2:50917686-50917705 | None:intergenic | 40.0% | |
| CAATGTTCAAATTCCAGGTG+GGG | + | chr4_2:50917687-50917706 | None:intergenic | 40.0% | |
| CCAATGTTCAAATTCCAGGT+GGG | + | chr4_2:50917688-50917707 | None:intergenic | 40.0% | |
| CCACCTGGAATTTGAACATT+GGG | - | chr4_2:50917686-50917705 | Msa0605170:intron | 40.0% | |
| AAATTCACAAAGCAACCGAC+GGG | + | chr4_2:50917754-50917773 | None:intergenic | 40.0% | |
| CATGATTGGGATTGCATTTC+TGG | - | chr4_2:50917896-50917915 | Msa0605170:intron | 40.0% | |
| ! | ACTGTTTTCAATCTCAGCCA+AGG | + | chr4_2:50917985-50918004 | None:intergenic | 40.0% |
| GGAAGTAGTAGATCATTGGT+TGG | + | chr4_2:50918102-50918121 | None:intergenic | 40.0% | |
| AGGAGGAAGTAGTAGATCAT+TGG | + | chr4_2:50918106-50918125 | None:intergenic | 40.0% | |
| CAAGAGACATGGAATATGGA+GGG | + | chr4_2:50918140-50918159 | None:intergenic | 40.0% | |
| TCAAGAGACATGGAATATGG+AGG | + | chr4_2:50918141-50918160 | None:intergenic | 40.0% | |
| ATCCCTTCTGTCAATAAGTC+CGG | - | chr4_2:50918180-50918199 | Msa0605170:intron | 40.0% | |
| TGTGATTAATCCATTGCGAC+CGG | + | chr4_2:50918202-50918221 | None:intergenic | 40.0% | |
| GCAAAATCATGTTGAAGACG+GGG | - | chr4_2:50918266-50918285 | Msa0605170:intron | 40.0% | |
| CAACGAACCTTCTGCAAATT+AGG | + | chr4_2:50918396-50918415 | None:intergenic | 40.0% | |
| ! | CTAATTTGCAGAAGGTTCGT+TGG | - | chr4_2:50918394-50918413 | Msa0605170:intron | 40.0% |
| ACCACTGAAAATAAGGGTGA+TGG | - | chr4_2:50918465-50918484 | Msa0605170:intron | 40.0% | |
| !!! | TCCATCACCCTTATTTTCAG+TGG | + | chr4_2:50918469-50918488 | None:intergenic | 40.0% |
| !!! | AGAGTTTTGGTGCTGGAAAA+TGG | - | chr4_2:50918504-50918523 | Msa0605170:intron | 40.0% |
| !!! | GAGTTTTGGTGCTGGAAAAT+GGG | - | chr4_2:50918505-50918524 | Msa0605170:intron | 40.0% |
| !!! | AGTTTTGGTGCTGGAAAATG+GGG | - | chr4_2:50918506-50918525 | Msa0605170:intron | 40.0% |
| TGAGTGATTGGCATGATTAC+TGG | - | chr4_2:50918749-50918768 | Msa0605170:CDS | 40.0% | |
| CGCAATTAAACACGCATATG+TGG | + | chr4_2:50918904-50918923 | None:intergenic | 40.0% | |
| TCTTCTTGTGATTCGCTGCT+AGG | + | chr4_2:50915991-50916010 | None:intergenic | 45.0% | |
| AAGACGAGGATGCTACTGAT+AGG | - | chr4_2:50916146-50916165 | Msa0605170:three_prime_UTR | 45.0% | |
| ATCAGTGTCATGTCTGGTGT+CGG | + | chr4_2:50916380-50916399 | None:intergenic | 45.0% | |
| CCTTCTACTGATAGCAGAGA+TGG | + | chr4_2:50917014-50917033 | None:intergenic | 45.0% | |
| CCATCTCTGCTATCAGTAGA+AGG | - | chr4_2:50917011-50917030 | Msa0605170:intron | 45.0% | |
| TTCTACAATTATGGTCGCGG+TGG | - | chr4_2:50917201-50917220 | Msa0605170:intron | 45.0% | |
| ! | GACAAGGCATCTTACAAGCA+AGG | + | chr4_2:50917605-50917624 | None:intergenic | 45.0% |
| CCCACCTGGAATTTGAACAT+TGG | - | chr4_2:50917685-50917704 | Msa0605170:intron | 45.0% | |
| CCCAATGTTCAAATTCCAGG+TGG | + | chr4_2:50917689-50917708 | None:intergenic | 45.0% | |
| CGACCCAATGTTCAAATTCC+AGG | + | chr4_2:50917692-50917711 | None:intergenic | 45.0% | |
| CACTGTTTCACTGGCAAAAG+TGG | + | chr4_2:50918076-50918095 | None:intergenic | 45.0% | |
| ! | CACTTTTGCCAGTGAAACAG+TGG | - | chr4_2:50918074-50918093 | Msa0605170:intron | 45.0% |
| GACCGGACTTATTGACAGAA+GGG | + | chr4_2:50918185-50918204 | None:intergenic | 45.0% | |
| AAAGCAGTGCTCACAGTTGT+TGG | - | chr4_2:50918336-50918355 | Msa0605170:intron | 45.0% | |
| TTCGTTGGAATGTACAACGC+AGG | - | chr4_2:50918409-50918428 | Msa0605170:intron | 45.0% | |
| TCGATGTCTCGTGAAAGAGA+GGG | - | chr4_2:50918533-50918552 | Msa0605170:intron | 45.0% | |
| GTTGCAGCAACAGCTGAAAA+TGG | + | chr4_2:50918567-50918586 | None:intergenic | 45.0% | |
| !! | AAAATTAAAACATAAAATAA+GGG | + | chr4_2:50918664-50918683 | None:intergenic | 5.0% |
| !! | AAAAATTAAAACATAAAATA+AGG | + | chr4_2:50918665-50918684 | None:intergenic | 5.0% |
| TAGCGAGAGCCACAGAACTT+AGG | - | chr4_2:50916059-50916078 | Msa0605170:three_prime_UTR | 50.0% | |
| TCGTCTTCGAGGAGACCATT+AGG | + | chr4_2:50916124-50916143 | None:intergenic | 50.0% | |
| TTGCGATGCACTCGAAGCTT+TGG | - | chr4_2:50916180-50916199 | Msa0605170:three_prime_UTR | 50.0% | |
| GACTCAGCTTTCTTCTCTGC+AGG | - | chr4_2:50916204-50916223 | Msa0605170:exon | 50.0% | |
| CAGCTTTCTTCTCTGCAGGT+AGG | - | chr4_2:50916208-50916227 | Msa0605170:CDS | 50.0% | |
| TACAATTATGGTCGCGGTGG+TGG | - | chr4_2:50917204-50917223 | Msa0605170:intron | 50.0% | |
| TTATGGGTATATCCCCCACC+TGG | - | chr4_2:50917671-50917690 | Msa0605170:intron | 50.0% | |
| TTGAACATTGGGTCGCCAAG+TGG | - | chr4_2:50917697-50917716 | Msa0605170:intron | 50.0% | |
| TGAACATTGGGTCGCCAAGT+GGG | - | chr4_2:50917698-50917717 | Msa0605170:intron | 50.0% | |
| AGACATGGAATATGGAGGGC+GGG | + | chr4_2:50918136-50918155 | None:intergenic | 50.0% | |
| GAGACATGGAATATGGAGGG+CGG | + | chr4_2:50918137-50918156 | None:intergenic | 50.0% | |
| CGACCGGACTTATTGACAGA+AGG | + | chr4_2:50918186-50918205 | None:intergenic | 50.0% | |
| GTCAATAAGTCCGGTCGCAA+TGG | - | chr4_2:50918189-50918208 | Msa0605170:intron | 50.0% | |
| AGTGCTCACAGTTGTTGGTG+TGG | - | chr4_2:50918341-50918360 | Msa0605170:intron | 50.0% | |
| ! | GTGTCCACCTGGTAGAGTTT+TGG | - | chr4_2:50918491-50918510 | Msa0605170:intron | 50.0% |
| AGCACCAAAACTCTACCAGG+TGG | + | chr4_2:50918498-50918517 | None:intergenic | 50.0% | |
| !! | ACCTGGTAGAGTTTTGGTGC+TGG | - | chr4_2:50918497-50918516 | Msa0605170:intron | 50.0% |
| TCCAGCACCAAAACTCTACC+AGG | + | chr4_2:50918501-50918520 | None:intergenic | 50.0% | |
| !! | TTTGGTGCTGGAAAATGGGG+AGG | - | chr4_2:50918509-50918528 | Msa0605170:intron | 50.0% |
| CTCGATGTCTCGTGAAAGAG+AGG | - | chr4_2:50918532-50918551 | Msa0605170:intron | 50.0% | |
| CCTCGTCTTCATCGTCTTCG+AGG | + | chr4_2:50916135-50916154 | None:intergenic | 55.0% | |
| CCTCGAAGACGATGAAGACG+AGG | - | chr4_2:50916132-50916151 | Msa0605170:three_prime_UTR | 55.0% | |
| GTGCGTCTCTGTTAGTCACG+TGG | + | chr4_2:50916700-50916719 | None:intergenic | 55.0% | |
| GACTAACAGAGACGCACACG+TGG | - | chr4_2:50916703-50916722 | Msa0605170:CDS | 55.0% | |
| CGTGTCGTGGCAAACACTGA+AGG | + | chr4_2:50916980-50916999 | None:intergenic | 55.0% | |
| !! | CGCGGTGGTGGAACTACAAA+AGG | - | chr4_2:50917216-50917235 | Msa0605170:intron | 55.0% |
| GAAGGGGCTAGATTCCCACT+TGG | + | chr4_2:50917715-50917734 | None:intergenic | 55.0% | |
| TCACAAAGCAACCGACGGGT+GGG | + | chr4_2:50917750-50917769 | None:intergenic | 55.0% | |
| TTCACAAAGCAACCGACGGG+TGG | + | chr4_2:50917751-50917770 | None:intergenic | 55.0% | |
| ! | GGTTGGCTCCACTGTTTCAC+TGG | + | chr4_2:50918085-50918104 | None:intergenic | 55.0% |
| !! | TATGGAGGGCGGGTTGGATA+AGG | + | chr4_2:50918126-50918145 | None:intergenic | 55.0% |
| ATGGAATATGGAGGGCGGGT+TGG | + | chr4_2:50918132-50918151 | None:intergenic | 55.0% | |
| TGGGACGGGTCTAGCAGAAG+GGG | + | chr4_2:50917731-50917750 | None:intergenic | 60.0% | |
| GTGGGACGGGTCTAGCAGAA+GGG | + | chr4_2:50917732-50917751 | None:intergenic | 60.0% | |
| AAAGCAACCGACGGGTGGGA+CGG | + | chr4_2:50917746-50917765 | None:intergenic | 60.0% | |
| !! | GGTGATGGACAGTGTCCACC+TGG | - | chr4_2:50918480-50918499 | Msa0605170:intron | 60.0% |
| GGTGGGACGGGTCTAGCAGA+AGG | + | chr4_2:50917733-50917752 | None:intergenic | 65.0% | |
| AAGCAACCGACGGGTGGGAC+GGG | + | chr4_2:50917745-50917764 | None:intergenic | 65.0% | |
| !! | GGAGGGCGGGTTGGATAAGG+AGG | + | chr4_2:50918123-50918142 | None:intergenic | 65.0% |
| GCTAGACCCGTCCCACCCGT+CGG | - | chr4_2:50917736-50917755 | Msa0605170:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 50915890 | 50918932 | 50915890 | ID=Msa0605170;Name=Msa0605170 |
| chr4_2 | mRNA | 50915890 | 50918932 | 50915890 | ID=Msa0605170-mRNA-1;Parent=Msa0605170;Name=Msa0605170-mRNA-1;_AED=0.01;_eAED=0.01;_QI=141|0|0.66|0.66|1|1|3|318|290 |
| chr4_2 | exon | 50915890 | 50916877 | 50915890 | ID=Msa0605170-mRNA-1:exon:12078;Parent=Msa0605170-mRNA-1 |
| chr4_2 | exon | 50917007 | 50917014 | 50917007 | ID=Msa0605170-mRNA-1:exon:12077;Parent=Msa0605170-mRNA-1 |
| chr4_2 | exon | 50918597 | 50918932 | 50918597 | ID=Msa0605170-mRNA-1:exon:12076;Parent=Msa0605170-mRNA-1 |
| chr4_2 | five_prime_UTR | 50918792 | 50918932 | 50918792 | ID=Msa0605170-mRNA-1:five_prime_utr;Parent=Msa0605170-mRNA-1 |
| chr4_2 | CDS | 50918597 | 50918791 | 50918597 | ID=Msa0605170-mRNA-1:cds;Parent=Msa0605170-mRNA-1 |
| chr4_2 | CDS | 50917007 | 50917014 | 50917007 | ID=Msa0605170-mRNA-1:cds;Parent=Msa0605170-mRNA-1 |
| chr4_2 | CDS | 50916208 | 50916877 | 50916208 | ID=Msa0605170-mRNA-1:cds;Parent=Msa0605170-mRNA-1 |
| chr4_2 | three_prime_UTR | 50915890 | 50916207 | 50915890 | ID=Msa0605170-mRNA-1:three_prime_utr;Parent=Msa0605170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
