Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0110750 | XP_003590183.2 | 96.746 | 1137 | 37 | 0 | 1 | 1137 | 1 | 1137 | 0.0 | 2279 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0110750 | sp|Q84LK0|MSH1_ARATH | 65.963 | 1137 | 355 | 7 | 1 | 1135 | 1 | 1107 | 0.0 | 1524 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0110750 | G7I6Q0 | 96.746 | 1137 | 37 | 0 | 1 | 1137 | 1 | 1137 | 0.0 | 2279 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0017060 | Msa0110750 | 0.805483 | 1.306417e-49 | -8.615850e-47 |
Msa0035090 | Msa0110750 | 0.815779 | 7.763383e-52 | -8.615850e-47 |
Msa0083570 | Msa0110750 | 0.815404 | 9.404852e-52 | -8.615850e-47 |
Msa0110750 | Msa0130120 | 0.810856 | 9.359241e-51 | -8.615850e-47 |
Msa0110750 | Msa0215980 | 0.801173 | 1.020038e-48 | -8.615850e-47 |
Msa0110750 | Msa0253410 | 0.829389 | 5.290138e-55 | -8.615850e-47 |
Msa0110750 | Msa0358230 | 0.806383 | 8.449360e-50 | -8.615850e-47 |
Msa0110750 | Msa0399180 | 0.831838 | 1.330500e-55 | -8.615850e-47 |
Msa0110750 | Msa0417630 | 0.808901 | 2.466086e-50 | -8.615850e-47 |
Msa0110750 | Msa0434630 | 0.803218 | 3.872107e-49 | -8.615850e-47 |
Msa0110750 | Msa0482020 | 0.817459 | 3.262026e-52 | -8.615850e-47 |
Msa0110750 | Msa0504740 | 0.825799 | 3.849806e-54 | -8.615850e-47 |
Msa0110750 | Msa0524020 | 0.826666 | 2.393881e-54 | -8.615850e-47 |
Msa0110750 | Msa0550720 | 0.811391 | 7.166547e-51 | -8.615850e-47 |
Msa0110750 | Msa0601710 | 0.810048 | 1.399037e-50 | -8.615850e-47 |
Msa0110750 | Msa0619060 | 0.829366 | 5.360010e-55 | -8.615850e-47 |
Msa0110750 | Msa0624240 | 0.804489 | 2.107893e-49 | -8.615850e-47 |
Msa0110750 | Msa0647110 | 0.824757 | 6.791121e-54 | -8.615850e-47 |
Msa0110750 | Msa0647460 | 0.801111 | 1.050346e-48 | -8.615850e-47 |
Msa0110750 | Msa0703720 | 0.814345 | 1.615001e-51 | -8.615850e-47 |
Msa0110750 | Msa0703760 | 0.802974 | 4.349427e-49 | -8.615850e-47 |
Msa0110750 | Msa0733110 | 0.807946 | 3.943307e-50 | -8.615850e-47 |
Msa0110750 | Msa0804110 | 0.816203 | 6.242144e-52 | -8.615850e-47 |
Msa0110750 | Msa0814760 | 0.803174 | 3.954304e-49 | -8.615850e-47 |
Msa0110750 | Msa0926860 | 0.801031 | 1.090602e-48 | -8.615850e-47 |
Msa0110750 | Msa0972730 | 0.807149 | 5.820673e-50 | -8.615850e-47 |
Msa0110750 | Msa1050240 | 0.839301 | 1.720029e-57 | -8.615850e-47 |
Msa0110750 | Msa1072080 | 0.803589 | 3.243123e-49 | -8.615850e-47 |
Msa0110750 | Msa1103620 | 0.801803 | 7.578081e-49 | -8.615850e-47 |
Msa0110750 | Msa1209390 | 0.816565 | 5.180336e-52 | -8.615850e-47 |
Msa0110750 | Msa1215770 | 0.815794 | 7.700214e-52 | -8.615850e-47 |
Msa0110750 | Msa1275290 | 0.803369 | 3.602709e-49 | -8.615850e-47 |
Msa0110750 | Msa1324940 | 0.802486 | 5.483408e-49 | -8.615850e-47 |
Msa0110750 | Msa1331900 | 0.811380 | 7.206916e-51 | -8.615850e-47 |
Msa0110750 | Msa1336320 | 0.830738 | 2.479758e-55 | -8.615850e-47 |
Msa0110750 | Msa1339250 | 0.818814 | 1.610169e-52 | -8.615850e-47 |
Msa0110750 | Msa1367810 | 0.831352 | 1.753075e-55 | -8.615850e-47 |
Msa0110750 | Msa1368730 | 0.803175 | 3.951064e-49 | -8.615850e-47 |
Msa0110750 | Msa1373500 | 0.811979 | 5.339934e-51 | -8.615850e-47 |
Msa0110750 | Msa1374810 | 0.802844 | 4.625957e-49 | -8.615850e-47 |
Msa0110750 | Msa1376530 | 0.806603 | 7.591487e-50 | -8.615850e-47 |
Msa0110750 | Msa1429390 | 0.801792 | 7.617915e-49 | -8.615850e-47 |
Msa0110750 | Msa1432470 | 0.805572 | 1.251123e-49 | -8.615850e-47 |
Msa0110750 | Msa1442300 | 0.824924 | 6.202096e-54 | -8.615850e-47 |
Msa0110750 | Msa1451840 | 0.800340 | 1.509081e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0110750 | MtrunA17_Chr1g0168681 | 96.746 | 1137 | 37 | 0 | 1 | 1137 | 1 | 1137 | 0.0 | 2279 |
Msa0110750 | MtrunA17_Chr7g0269931 | 36.126 | 191 | 116 | 2 | 760 | 944 | 1023 | 1213 | 4.80e-25 | 113 |
Msa0110750 | MtrunA17_Chr5g0428751 | 33.333 | 195 | 120 | 4 | 764 | 953 | 430 | 619 | 1.33e-20 | 98.2 |
Msa0110750 | MtrunA17_Chr6g0485261 | 32.474 | 194 | 111 | 4 | 765 | 943 | 897 | 1085 | 8.88e-19 | 92.8 |
Msa0110750 | MtrunA17_Chr4g0062701 | 31.250 | 192 | 120 | 4 | 766 | 945 | 664 | 855 | 1.04e-17 | 89.0 |
Msa0110750 | MtrunA17_Chr4g0047451 | 27.586 | 203 | 135 | 3 | 743 | 944 | 414 | 605 | 1.21e-16 | 85.5 |
Msa0110750 | MtrunA17_Chr1g0203461 | 30.279 | 251 | 149 | 7 | 710 | 943 | 746 | 987 | 1.58e-15 | 82.0 |
Msa0110750 | MtrunA17_Chr5g0399431 | 25.676 | 296 | 175 | 11 | 611 | 889 | 153 | 420 | 9.49e-15 | 78.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0110750 | AT3G24320.1 | 65.963 | 1137 | 355 | 7 | 1 | 1135 | 1 | 1107 | 0.0 | 1524 |
Msa0110750 | AT3G24320.2 | 65.692 | 889 | 277 | 4 | 248 | 1135 | 1 | 862 | 0.0 | 1180 |
Msa0110750 | AT4G02070.1 | 36.634 | 202 | 117 | 6 | 748 | 943 | 1067 | 1263 | 9.75e-24 | 109 |
Msa0110750 | AT4G02070.2 | 36.634 | 202 | 117 | 6 | 748 | 943 | 1064 | 1260 | 1.14e-23 | 109 |
Msa0110750 | AT5G54090.1 | 34.199 | 231 | 129 | 7 | 743 | 965 | 424 | 639 | 2.32e-21 | 101 |
Msa0110750 | AT3G24495.1 | 28.134 | 359 | 221 | 10 | 642 | 970 | 711 | 1062 | 1.22e-20 | 99.4 |
Msa0110750 | AT4G25540.1 | 32.381 | 210 | 124 | 6 | 766 | 964 | 814 | 1016 | 7.43e-17 | 87.0 |
Msa0110750 | AT3G18524.1 | 29.688 | 192 | 121 | 4 | 766 | 945 | 663 | 852 | 1.21e-15 | 82.8 |
Msa0110750 | AT4G17380.1 | 27.727 | 220 | 143 | 4 | 763 | 981 | 547 | 751 | 2.50e-14 | 78.6 |
Msa0110750 | AT4G17380.2 | 32.593 | 135 | 88 | 1 | 763 | 894 | 547 | 681 | 7.52e-14 | 76.6 |
Msa0110750 | AT1G65070.1 | 27.419 | 248 | 170 | 5 | 703 | 943 | 331 | 575 | 1.19e-13 | 76.3 |
Msa0110750 | AT1G65070.3 | 27.419 | 248 | 170 | 5 | 703 | 943 | 331 | 575 | 1.32e-13 | 75.9 |
Msa0110750 | AT1G65070.2 | 30.939 | 181 | 122 | 2 | 764 | 943 | 397 | 575 | 1.64e-13 | 75.9 |
Msa0110750 | AT1G65070.4 | 30.939 | 181 | 122 | 2 | 764 | 943 | 397 | 575 | 1.78e-13 | 75.9 |
Find 292 sgRNAs with CRISPR-Local
Find 978 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCTATGTATATGGACTTAT+TGG | 0.101408 | 1_3:-23813485 | Msa0110750:CDS |
TTTGAAATAACCTTGAATTT+TGG | 0.143407 | 1_3:+23810728 | None:intergenic |
CATCAGCTATATTGCTTAAT+AGG | 0.169046 | 1_3:+23802185 | None:intergenic |
AAGATAAAGTGTTTCTTAAT+TGG | 0.179571 | 1_3:-23803092 | Msa0110750:CDS |
GTTTACTCACAATATTATTT+TGG | 0.194137 | 1_3:-23802096 | Msa0110750:three_prime_UTR |
GTAGATGTTCCAAGAGTTAA+AGG | 0.212866 | 1_3:+23811727 | None:intergenic |
CTTTGGTTCTCAGGTATGTT+AGG | 0.214976 | 1_3:-23810788 | Msa0110750:intron |
TAACTGTGTCTTCGGGAAAT+AGG | 0.228381 | 1_3:-23811756 | Msa0110750:CDS |
CGACCCTGTTTCTGATCTTT+TGG | 0.234521 | 1_3:-23811943 | Msa0110750:CDS |
TATATACTACCTCAAACTTC+TGG | 0.234822 | 1_3:+23806366 | None:intergenic |
TGATCACAAAAGTTCATTTC+AGG | 0.235726 | 1_3:-23805260 | Msa0110750:intron |
GATATAGATCTTCAGCTCTT+TGG | 0.235792 | 1_3:+23803369 | None:intergenic |
CTTGGAACATCTACTCAAAT+TGG | 0.241948 | 1_3:-23811718 | Msa0110750:intron |
TTAGAACCACATATCATTCT+TGG | 0.245428 | 1_3:-23801816 | Msa0110750:three_prime_UTR |
TTTCATCAGTAAAACTTAAA+AGG | 0.250296 | 1_3:+23802044 | None:intergenic |
AAGCATGATAGAGTCAAAAT+AGG | 0.256430 | 1_3:+23805309 | None:intergenic |
AGATATAAAACGACGTTTCT+TGG | 0.262650 | 1_3:+23813701 | None:intergenic |
ACTTGGGATATGTGGACTTA+TGG | 0.268862 | 1_3:-23805356 | Msa0110750:CDS |
ATCTGATACTCTGAGCTTCT+TGG | 0.270720 | 1_3:+23815299 | None:intergenic |
TTCTTGGTTCGAGCTTGAGC+TGG | 0.277875 | 1_3:+23813717 | None:intergenic |
GAAATATTGAAACATTTAAT+TGG | 0.278079 | 1_3:-23809489 | Msa0110750:CDS |
TTGCCTTGACATTTGCTTCA+TGG | 0.279311 | 1_3:+23807208 | None:intergenic |
CTTGATAGAAGTGGCTGTTT+GGG | 0.282969 | 1_3:-23803581 | Msa0110750:CDS |
TTCTTTGGTTTCAGAATCTT+AGG | 0.288160 | 1_3:-23813988 | Msa0110750:intron |
CCAGGAAACCCCTATGTATA+TGG | 0.292216 | 1_3:-23813494 | Msa0110750:CDS |
CAAGGCAAACACTAGAGTTT+TGG | 0.296309 | 1_3:-23807193 | Msa0110750:CDS |
AAATCCTTTACTCACAATAT+TGG | 0.299236 | 1_3:+23811555 | None:intergenic |
TCCCTCGGTGTCTGTTCTTA+AGG | 0.300218 | 1_3:-23817190 | Msa0110750:five_prime_UTR |
ATCAATGGTAATAATTCTAA+TGG | 0.303527 | 1_3:-23803278 | Msa0110750:CDS |
TTCCTCTATTTCCTAGTTCC+AGG | 0.303533 | 1_3:-23802268 | Msa0110750:CDS |
AACACTTTATACCAAATATA+TGG | 0.309024 | 1_3:-23807458 | Msa0110750:CDS |
CCTATGTATATGGACTTATT+GGG | 0.314962 | 1_3:-23813484 | Msa0110750:CDS |
GGTCCCACATGGGTGGCTAC+TGG | 0.316978 | 1_3:-23809468 | Msa0110750:CDS |
ACGTCCAAGTGGGCAGAATT+TGG | 0.331384 | 1_3:-23812023 | Msa0110750:CDS |
ACCACACTGCTTCCTGTTCC+CGG | 0.334290 | 1_3:+23807490 | None:intergenic |
CCATATACATAGGGGTTTCC+TGG | 0.337764 | 1_3:+23813494 | None:intergenic |
GATGGTAAGCATCGGAATTT+CGG | 0.338305 | 1_3:-23802166 | Msa0110750:CDS |
TTCTGAAGAATATGTCTTCA+TGG | 0.338718 | 1_3:+23812489 | None:intergenic |
CACAACAGGGCAACCAGCTT+TGG | 0.339516 | 1_3:+23814525 | None:intergenic |
GCAAAAGGGACTTGCATTGC+AGG | 0.339981 | 1_3:-23803620 | Msa0110750:CDS |
TGATTAGCAGCGTTTCTATT+TGG | 0.343369 | 1_3:+23802230 | None:intergenic |
ATTTGTGCTGCTGCACTACT+TGG | 0.350396 | 1_3:-23805373 | Msa0110750:CDS |
TCTACAAAGTTCAATATGAT+TGG | 0.351830 | 1_3:+23809566 | None:intergenic |
TCTTGATAGAAGTGGCTGTT+TGG | 0.356538 | 1_3:-23803582 | Msa0110750:CDS |
TCTGCTATGTTGAACCAATA+TGG | 0.360428 | 1_3:+23805487 | None:intergenic |
AACTGTGTCTTCGGGAAATA+GGG | 0.360832 | 1_3:-23811755 | Msa0110750:CDS |
GAAATTATTGTATGTTGTAT+TGG | 0.361271 | 1_3:-23801944 | Msa0110750:three_prime_UTR |
ACAACAGGGCAACCAGCTTT+GGG | 0.369360 | 1_3:+23814526 | None:intergenic |
TTCTGGGATTCTACTATTGT+AGG | 0.370554 | 1_3:+23806383 | None:intergenic |
TCCTTATGTGAAACTTCAAT+TGG | 0.371476 | 1_3:+23803194 | None:intergenic |
GGGGTACCAGTCCATATATT+TGG | 0.374561 | 1_3:+23807447 | None:intergenic |
GGAGTTCTGCTATAAAATCT+TGG | 0.386208 | 1_3:+23803144 | None:intergenic |
CAGTGTAACATGCTCAATTC+CGG | 0.387233 | 1_3:-23810581 | Msa0110750:CDS |
TCCAATTGAAGTTTCACATA+AGG | 0.387461 | 1_3:-23803195 | Msa0110750:CDS |
TCGTAACGTAACTGTGTCTT+CGG | 0.392745 | 1_3:-23811764 | Msa0110750:CDS |
AGGGAGAAATATCTTATTCC+CGG | 0.394099 | 1_3:-23807509 | Msa0110750:CDS |
TAGTTGGTTTATTACCATAT+TGG | 0.395583 | 1_3:-23805501 | Msa0110750:CDS |
CCTACATAGAGTTTCTTATC+TGG | 0.397488 | 1_3:+23803008 | None:intergenic |
TTTGGTTCTCAGGTATGTTA+GGG | 0.397494 | 1_3:-23810787 | Msa0110750:intron |
GATTGTAAGTACATATTAGT+TGG | 0.399488 | 1_3:-23801922 | Msa0110750:intron |
CCCATCCAACATACTAAAAC+AGG | 0.400597 | 1_3:-23801860 | Msa0110750:intron |
TGCAGAAAACTATGCAAAAC+AGG | 0.403387 | 1_3:-23803318 | Msa0110750:CDS |
ATATACTACCTCAAACTTCT+GGG | 0.403563 | 1_3:+23806367 | None:intergenic |
TTTGTGCTGTTGTTGTCTCT+TGG | 0.407098 | 1_3:+23817243 | None:intergenic |
GTGAAGGGAGAAGAAGGAAA+TGG | 0.407787 | 1_3:-23806412 | Msa0110750:CDS |
TTCCTGGAACTAGGAAATAG+AGG | 0.408371 | 1_3:+23802266 | None:intergenic |
ATGGGCACAACTTGCATTGA+TGG | 0.412451 | 1_3:-23803488 | Msa0110750:CDS |
AGGGCTCAACCTTTAACTCT+TGG | 0.413129 | 1_3:-23811736 | Msa0110750:CDS |
TAACAAAACACACCTTGATA+AGG | 0.414151 | 1_3:+23807329 | None:intergenic |
TGTTTAATTTGTTCCTCTCC+AGG | 0.418327 | 1_3:+23807426 | None:intergenic |
TGGAATACCTTCTTTGTTGA+AGG | 0.419005 | 1_3:-23811607 | Msa0110750:CDS |
GAACTTCGATCCATCATTGC+TGG | 0.422226 | 1_3:-23803698 | Msa0110750:CDS |
GTCCCACATGGGTGGCTACT+GGG | 0.424968 | 1_3:-23809467 | Msa0110750:CDS |
AACAAGCACAAGGCTCCTTT+CGG | 0.426958 | 1_3:+23803670 | None:intergenic |
ATCGAACCATTCAGAATGTC+TGG | 0.427480 | 1_3:+23811968 | None:intergenic |
TTGACCAAAAGATCAGAAAC+AGG | 0.429669 | 1_3:+23811939 | None:intergenic |
TCAATTAGATTCATTGTTGA+GGG | 0.430073 | 1_3:+23815079 | None:intergenic |
TTCGGTGGTTCCAGCAATGA+TGG | 0.430365 | 1_3:+23803688 | None:intergenic |
CTTGATTTACCACCACCATT+TGG | 0.431025 | 1_3:+23805409 | None:intergenic |
CTTGAATACTCAAATTTGCT+TGG | 0.433294 | 1_3:-23815052 | Msa0110750:CDS |
GGAGACTTCTATGAAGCTCT+TGG | 0.433758 | 1_3:-23814619 | Msa0110750:CDS |
ACATAGGTAAAGGAGCTCTA+TGG | 0.435253 | 1_3:-23811808 | Msa0110750:intron |
AATATCTTATTCCCGGGAAC+AGG | 0.435984 | 1_3:-23807502 | Msa0110750:CDS |
TGAAGGGAGAAGAAGGAAAT+GGG | 0.436793 | 1_3:-23806411 | Msa0110750:CDS |
CCTACTACAGGCATAGGTTC+TGG | 0.437803 | 1_3:+23813440 | None:intergenic |
TTCACCAAATTCTGCCCACT+TGG | 0.439880 | 1_3:+23812019 | None:intergenic |
GTCTCAACTTAGAGCTCCTA+AGG | 0.447138 | 1_3:-23807529 | Msa0110750:CDS |
TCAGAATCTTAGGCAAACTT+TGG | 0.447427 | 1_3:-23813978 | Msa0110750:intron |
CAATCATTATTTCTATTGAC+AGG | 0.448373 | 1_3:-23805433 | Msa0110750:CDS |
TATTTCTGCATACATCTTTG+AGG | 0.450139 | 1_3:-23812408 | Msa0110750:CDS |
GAGATTGCATCCAAAATTCA+AGG | 0.450407 | 1_3:-23810738 | Msa0110750:intron |
CTCAGGAATTCCTTCCCTCT+TGG | 0.450796 | 1_3:+23803400 | None:intergenic |
AAGGAGGAGAAGGAGAATTC+CGG | 0.451171 | 1_3:+23817040 | None:intergenic |
TATGCGGGTTTAAATCCCTT+TGG | 0.451745 | 1_3:-23814571 | Msa0110750:CDS |
TTGAAGAGCCTATAGTCATC+GGG | 0.453265 | 1_3:+23803051 | None:intergenic |
ATGGACAAACAAAACCTACT+TGG | 0.453763 | 1_3:-23803469 | Msa0110750:CDS |
GGAAGCCTCGATTCGGAAGT+TGG | 0.454853 | 1_3:+23802206 | None:intergenic |
TTGACGATATGGAGTCTGTA+TGG | 0.455195 | 1_3:-23807779 | Msa0110750:CDS |
TCATTCCCTCTCGTTTCCTC+AGG | 0.457006 | 1_3:-23817011 | Msa0110750:intron |
AACTACATTCTCCCCACAAC+AGG | 0.458392 | 1_3:+23811991 | None:intergenic |
AAACATGCTTTAGATTCTAA+AGG | 0.460656 | 1_3:-23807399 | Msa0110750:CDS |
TAGCAGCGTTTCTATTTGGC+AGG | 0.462616 | 1_3:+23802234 | None:intergenic |
ATTTCGATGAATAGAACAAA+TGG | 0.465779 | 1_3:-23815384 | Msa0110750:intron |
AGCATGATAGAGTCAAAATA+GGG | 0.468162 | 1_3:+23805310 | None:intergenic |
TCTTGGTTCGAGCTTGAGCT+GGG | 0.468735 | 1_3:+23813718 | None:intergenic |
GAATAAGATATTTCTCCCTT+AGG | 0.469726 | 1_3:+23807513 | None:intergenic |
GATTCTAAAGGTAGAAAGGT+AGG | 0.469843 | 1_3:-23807387 | Msa0110750:CDS |
CGAGGAACAGAGACTGCAAA+AGG | 0.471698 | 1_3:-23803635 | Msa0110750:CDS |
AGCAATGATGGATCGAAGTT+CGG | 0.472676 | 1_3:+23803700 | None:intergenic |
GCTCTTTGGATAACAATCTC+AGG | 0.474099 | 1_3:+23803383 | None:intergenic |
TCAATGGTAATAATTCTAAT+GGG | 0.475596 | 1_3:-23803277 | Msa0110750:CDS |
TTCAATTAGATTCATTGTTG+AGG | 0.475786 | 1_3:+23815078 | None:intergenic |
CGAGAGGGAATGAAGGAAGA+AGG | 0.475917 | 1_3:+23817021 | None:intergenic |
ACACTCGGTGTGCGTGTGGC+GGG | 0.476037 | 1_3:-23817218 | Msa0110750:five_prime_UTR |
CCAATAAGTCCATATACATA+GGG | 0.476395 | 1_3:+23813485 | None:intergenic |
AATCGCAAGATGAAGATAGT+TGG | 0.476644 | 1_3:-23805517 | Msa0110750:CDS |
TTTAGATTCTAAAGGTAGAA+AGG | 0.482930 | 1_3:-23807391 | Msa0110750:CDS |
CACATGAGCATATAACGCTT+TGG | 0.483246 | 1_3:+23807092 | None:intergenic |
ATGAAGGAAGAAGGAGGAGA+AGG | 0.487014 | 1_3:+23817030 | None:intergenic |
GAAGAAACACACGTAAATTC+CGG | 0.487982 | 1_3:+23810562 | None:intergenic |
TTAAAGACCGGAAAGTTTCA+AGG | 0.488874 | 1_3:-23815338 | Msa0110750:CDS |
TCTTAATTGGCACTAGGGAA+TGG | 0.489576 | 1_3:-23803079 | Msa0110750:CDS |
AGTAGAATCCCAGAAGTTTG+AGG | 0.489639 | 1_3:-23806375 | Msa0110750:intron |
CGTAACGTAACTGTGTCTTC+GGG | 0.490069 | 1_3:-23811763 | Msa0110750:CDS |
GATTGACGAAGTAATATCTC+TGG | 0.490505 | 1_3:-23807856 | Msa0110750:CDS |
AGGAATTTCTCATTCGGCAA+GGG | 0.490800 | 1_3:-23812539 | Msa0110750:CDS |
GCTGCACTACTTGGGATATG+TGG | 0.491552 | 1_3:-23805364 | Msa0110750:CDS |
GGAATCACGGCGGATTCAGC+AGG | 0.494688 | 1_3:+23805331 | None:intergenic |
GAGACTTCTATGAAGCTCTT+GGG | 0.497556 | 1_3:-23814618 | Msa0110750:CDS |
GCGGGTTTAAATCCCTTTGG+TGG | 0.499538 | 1_3:-23814568 | Msa0110750:CDS |
TTGGATGCAATCTCATAAGA+AGG | 0.501103 | 1_3:+23810747 | None:intergenic |
GTTTAATTTGTTCCTCTCCA+GGG | 0.501339 | 1_3:+23807427 | None:intergenic |
AACATTTAATTGGTCCCACA+TGG | 0.503451 | 1_3:-23809479 | Msa0110750:CDS |
CCCAATAAGTCCATATACAT+AGG | 0.504850 | 1_3:+23813484 | None:intergenic |
GAGAATTCCGGAAAAGAGAA+AGG | 0.505715 | 1_3:+23817052 | None:intergenic |
ACTTTCAGGCATGCTCATCC+AGG | 0.506081 | 1_3:-23813512 | Msa0110750:intron |
AAGTAAGCACATCATTTATG+TGG | 0.507055 | 1_3:+23807736 | None:intergenic |
AAGATCTTTCTCACATATTG+TGG | 0.507630 | 1_3:-23815260 | Msa0110750:CDS |
TTGTATTCTTGTTGAATATG+CGG | 0.508271 | 1_3:-23814587 | Msa0110750:CDS |
GTGTTTCTTAATTGGCACTA+GGG | 0.508539 | 1_3:-23803084 | Msa0110750:CDS |
CCACACTGCTTCCTGTTCCC+GGG | 0.508620 | 1_3:+23807491 | None:intergenic |
CCAGAACCTATGCCTGTAGT+AGG | 0.508789 | 1_3:-23813440 | Msa0110750:intron |
ACAGGAAGCAGTGTGGTTCA+AGG | 0.510474 | 1_3:-23807484 | Msa0110750:CDS |
TGTTTGTGCAGTCTGAAGGC+AGG | 0.511359 | 1_3:-23814925 | Msa0110750:intron |
TGTATTCTTGTTGAATATGC+GGG | 0.511487 | 1_3:-23814586 | Msa0110750:CDS |
AGTGTTTCTTAATTGGCACT+AGG | 0.513671 | 1_3:-23803085 | Msa0110750:CDS |
GCGTTTCTATTTGGCAGGCC+AGG | 0.514502 | 1_3:+23802239 | None:intergenic |
AACACTGTACACAAAGCAAT+GGG | 0.515181 | 1_3:-23803506 | Msa0110750:CDS |
TTTCTATTGACAGGACCAAA+TGG | 0.518729 | 1_3:-23805424 | Msa0110750:CDS |
CACACTCGGTGTGCGTGTGG+CGG | 0.519424 | 1_3:-23817219 | Msa0110750:five_prime_UTR |
TTTAATTTGTTCCTCTCCAG+GGG | 0.519994 | 1_3:+23807428 | None:intergenic |
CTTAATAGGAAGCCTCGATT+CGG | 0.520072 | 1_3:+23802199 | None:intergenic |
AGTAAGACCTTCAACAAAGA+AGG | 0.520985 | 1_3:+23811600 | None:intergenic |
ATAGATTCTAACTTGAAGAA+TGG | 0.524090 | 1_3:-23815028 | Msa0110750:CDS |
TTCTCACATATTGTGGTGGA+AGG | 0.527521 | 1_3:-23815253 | Msa0110750:CDS |
AGGTGGAGGCCGCCTTATCA+AGG | 0.528089 | 1_3:-23807341 | Msa0110750:intron |
AATATGTCTTCATGGTCTCT+AGG | 0.529158 | 1_3:+23812497 | None:intergenic |
CTTGCAGTGAAGGGAGAAGA+AGG | 0.529921 | 1_3:-23806418 | Msa0110750:intron |
AGGAATAGCAGAGAAGGAAC+TGG | 0.530686 | 1_3:+23807812 | None:intergenic |
CGTGCACATCGATCAAAAGA+AGG | 0.533400 | 1_3:-23802307 | Msa0110750:CDS |
TACGTGTGTTTCTTCAGCAA+AGG | 0.535657 | 1_3:-23810554 | Msa0110750:intron |
CCTACTTGGATTCTGCAAGA+TGG | 0.535925 | 1_3:-23803455 | Msa0110750:CDS |
TCGATCAAAAGAAGGGCTGC+AGG | 0.537258 | 1_3:-23802299 | Msa0110750:CDS |
TCAGGTGTCATTCCGACGGA+TGG | 0.539396 | 1_3:-23811627 | Msa0110750:intron |
TTTGAAACTGCCAAGAGGGA+AGG | 0.541249 | 1_3:-23803410 | Msa0110750:CDS |
CAAAGCTGGTTGCCCTGTTG+TGG | 0.541775 | 1_3:-23814524 | Msa0110750:intron |
GTAGTTCCAGACATTCTGAA+TGG | 0.543495 | 1_3:-23811974 | Msa0110750:CDS |
TCAGATAGCATCCCCAAAGC+TGG | 0.543781 | 1_3:-23814538 | Msa0110750:CDS |
CGCCACACGCACACCGAGTG+TGG | 0.543904 | 1_3:+23817220 | None:intergenic |
CTTGAAGAGCCTATAGTCAT+CGG | 0.544068 | 1_3:+23803050 | None:intergenic |
ATTGAAACTCTTGATAGAAG+TGG | 0.546230 | 1_3:-23803590 | Msa0110750:CDS |
TTCATCAGGAATAGCAGAGA+AGG | 0.546650 | 1_3:+23807806 | None:intergenic |
CAACAATGAATCTAATTGAA+AGG | 0.547593 | 1_3:-23815075 | Msa0110750:CDS |
TTATTCAATTTGTTGAGTTG+AGG | 0.548180 | 1_3:+23817130 | None:intergenic |
TTGGATGATCTGACACGCAA+TGG | 0.548209 | 1_3:-23813959 | Msa0110750:CDS |
ATCTGATCGTAGACCACCAA+AGG | 0.548920 | 1_3:+23814555 | None:intergenic |
AATTGAAGTTTCACATAAGG+AGG | 0.549162 | 1_3:-23803192 | Msa0110750:CDS |
GAGGAAACGAGAGGGAATGA+AGG | 0.550774 | 1_3:+23817014 | None:intergenic |
AGACATTGACTTCAAAACCT+TGG | 0.551104 | 1_3:-23809442 | Msa0110750:intron |
AACCACACTCGGTGTGCGTG+TGG | 0.551239 | 1_3:-23817222 | Msa0110750:five_prime_UTR |
ACGTTACGAAACAGAACCTC+AGG | 0.553411 | 1_3:+23811778 | None:intergenic |
TGCTAAGCTACTTGAATGGA+AGG | 0.553515 | 1_3:-23809592 | Msa0110750:CDS |
TTTGTGCTGCTGCACTACTT+GGG | 0.553681 | 1_3:-23805372 | Msa0110750:CDS |
GAGGGAATGAAGGAAGAAGG+AGG | 0.554994 | 1_3:+23817024 | None:intergenic |
TGTATTGTGGAGGAAATTCA+AGG | 0.555964 | 1_3:-23813741 | Msa0110750:CDS |
CCAGATAAGAAACTCTATGT+AGG | 0.556399 | 1_3:-23803008 | Msa0110750:CDS |
GTCCTCAGCTGCTTTGTCCA+CGG | 0.556624 | 1_3:+23807713 | None:intergenic |
CCATCTTGCAGAATCCAAGT+AGG | 0.559341 | 1_3:+23803455 | None:intergenic |
CAGGAAGCAGTGTGGTTCAA+GGG | 0.561932 | 1_3:-23807483 | Msa0110750:CDS |
ATTCTAACTTGAAGAATGGA+AGG | 0.563858 | 1_3:-23815024 | Msa0110750:intron |
TTCTGCATACATCTTTGAGG+AGG | 0.564693 | 1_3:-23812405 | Msa0110750:CDS |
AGAGAAAGGGAACGAAAGCG+AGG | 0.564799 | 1_3:+23817066 | None:intergenic |
AGAATTCCGGAAAAGAGAAA+GGG | 0.565713 | 1_3:+23817053 | None:intergenic |
TTTATACCAAATATATGGAC+TGG | 0.566964 | 1_3:-23807453 | Msa0110750:CDS |
TTGATAGAAGTGGCTGTTTG+GGG | 0.567646 | 1_3:-23803580 | Msa0110750:CDS |
TAAAGACCGGAAAGTTTCAA+GGG | 0.568388 | 1_3:-23815337 | Msa0110750:CDS |
GTTCTTGATGTTCAGTGGCA+AGG | 0.569076 | 1_3:+23803526 | None:intergenic |
GTAGAAAGGTAGGTGAGGAA+TGG | 0.569613 | 1_3:-23807377 | Msa0110750:CDS |
GGGAGAAATATCTTATTCCC+GGG | 0.571092 | 1_3:-23807508 | Msa0110750:CDS |
GAATTGTCTAGTTACATCAA+TGG | 0.571307 | 1_3:-23803293 | Msa0110750:CDS |
TAGGAATTTCTCATTCGGCA+AGG | 0.571429 | 1_3:-23812540 | Msa0110750:CDS |
ATCTTTCTCACATATTGTGG+TGG | 0.573646 | 1_3:-23815257 | Msa0110750:CDS |
CTATTAAGCAATATAGCTGA+TGG | 0.576801 | 1_3:-23802184 | Msa0110750:CDS |
AAATGATGTGCTTACTTCCG+TGG | 0.579926 | 1_3:-23807730 | Msa0110750:CDS |
GAACACTGTACACAAAGCAA+TGG | 0.580622 | 1_3:-23803507 | Msa0110750:CDS |
AGACATTCTGAATGGTTCGA+TGG | 0.584193 | 1_3:-23811966 | Msa0110750:CDS |
AAGTGGGCAGAATTTGGTGA+AGG | 0.584310 | 1_3:-23812017 | Msa0110750:CDS |
GTGTGGCGGGAAGAGTCCCT+CGG | 0.585726 | 1_3:-23817205 | Msa0110750:five_prime_UTR |
GAGAAAGGGAACGAAAGCGA+GGG | 0.587557 | 1_3:+23817067 | None:intergenic |
TTCCGTGGACAAAGCAGCTG+AGG | 0.588630 | 1_3:-23807715 | Msa0110750:CDS |
AATATATGGACTGGTACCCC+TGG | 0.588784 | 1_3:-23807444 | Msa0110750:CDS |
TTACTTCCACCACATTGCAG+TGG | 0.589221 | 1_3:-23811582 | Msa0110750:CDS |
GCTCTATGGTCTTGATCCTG+AGG | 0.589258 | 1_3:-23811794 | Msa0110750:CDS |
TCACATATTGTGGTGGAAGG+AGG | 0.590137 | 1_3:-23815250 | Msa0110750:intron |
GTGGTAAATCAAGTTTACTT+CGG | 0.593011 | 1_3:-23805399 | Msa0110750:CDS |
AGAGTCAAAATAGGGAATCA+CGG | 0.597474 | 1_3:+23805318 | None:intergenic |
TAAAGGTAGAAAGGTAGGTG+AGG | 0.597978 | 1_3:-23807382 | Msa0110750:CDS |
TGGGCAGAATTTGGTGAAGG+GGG | 0.598874 | 1_3:-23812014 | Msa0110750:CDS |
AAGCACAAGGCTCCTTTCGG+TGG | 0.602348 | 1_3:+23803673 | None:intergenic |
CTGCAGAGTAAAACTTGACG+TGG | 0.603855 | 1_3:+23814862 | None:intergenic |
AGTGGGCAGAATTTGGTGAA+GGG | 0.606015 | 1_3:-23812016 | Msa0110750:CDS |
GGAATTTCTCATTCGGCAAG+GGG | 0.606177 | 1_3:-23812538 | Msa0110750:CDS |
AGATTGCTAAGCTACTTGAA+TGG | 0.611550 | 1_3:-23809596 | Msa0110750:CDS |
TATTGGTTCAACATAGCAGA+AGG | 0.611717 | 1_3:-23805484 | Msa0110750:CDS |
CTATGTATATGGACTTATTG+GGG | 0.613324 | 1_3:-23813483 | Msa0110750:CDS |
TCCATACCTACTACAGGCAT+AGG | 0.613653 | 1_3:+23813434 | None:intergenic |
ACATTTAATTGGTCCCACAT+GGG | 0.614830 | 1_3:-23809478 | Msa0110750:CDS |
ATCAACCAACTTCCGAATCG+AGG | 0.616628 | 1_3:-23802211 | Msa0110750:CDS |
GAGGAACAGAGACTGCAAAA+GGG | 0.616780 | 1_3:-23803634 | Msa0110750:CDS |
GTGGGCAGAATTTGGTGAAG+GGG | 0.618082 | 1_3:-23812015 | Msa0110750:CDS |
ACAACAGCACAAACCACACT+CGG | 0.619780 | 1_3:-23817233 | Msa0110750:five_prime_UTR |
TTTAATTGGTCCCACATGGG+TGG | 0.619875 | 1_3:-23809475 | Msa0110750:CDS |
ATGGTTTACCACTACGAAGG+TGG | 0.620328 | 1_3:-23807358 | Msa0110750:CDS |
CAACAGGGCAACCAGCTTTG+GGG | 0.623060 | 1_3:+23814527 | None:intergenic |
CGTCTCAGGTGTCATTCCGA+CGG | 0.627015 | 1_3:-23811631 | Msa0110750:intron |
TTGACAGGACCAAATGGTGG+TGG | 0.627465 | 1_3:-23805418 | Msa0110750:CDS |
AAAGAAGGTATTCCATCCGT+CGG | 0.632398 | 1_3:+23811615 | None:intergenic |
AAGTCATTATCTGTATACAC+TGG | 0.633431 | 1_3:+23802073 | None:intergenic |
GATGCAATCTCATAAGAAGG+AGG | 0.635557 | 1_3:+23810750 | None:intergenic |
GTCTTGACAGTGTATTGTGG+AGG | 0.636667 | 1_3:-23813751 | Msa0110750:intron |
GACGAAGTAATATCTCTGGA+TGG | 0.636880 | 1_3:-23807852 | Msa0110750:CDS |
ATATAGCTGATGGTAAGCAT+CGG | 0.637167 | 1_3:-23802174 | Msa0110750:CDS |
CAAAACACACCTTGATAAGG+CGG | 0.637337 | 1_3:+23807332 | None:intergenic |
GTACCATGAAGCAAATGTCA+AGG | 0.637451 | 1_3:-23807211 | Msa0110750:CDS |
TGAGGTGAAGAATGAATGTG+TGG | 0.638880 | 1_3:+23817148 | None:intergenic |
GTGCACATCGATCAAAAGAA+GGG | 0.639921 | 1_3:-23802306 | Msa0110750:CDS |
TAAGAAACTCTATGTAGGAG+AGG | 0.641008 | 1_3:-23803003 | Msa0110750:intron |
ATGTAGTTACGCGTAAACGT+TGG | 0.641298 | 1_3:+23802138 | None:intergenic |
ATGGACTGGTACCCCTGGAG+AGG | 0.642746 | 1_3:-23807439 | Msa0110750:CDS |
GTTTACCACTACGAAGGTGG+AGG | 0.643110 | 1_3:-23807355 | Msa0110750:CDS |
AAGCGTTATATGCTCATGTG+AGG | 0.646209 | 1_3:-23807089 | Msa0110750:intron |
TCTGATCGTAGACCACCAAA+GGG | 0.647302 | 1_3:+23814556 | None:intergenic |
TCTTTGAGGAGGAATTCTTG+TGG | 0.648468 | 1_3:-23812394 | Msa0110750:intron |
GATATGGAGTCTGTATGGAA+AGG | 0.648542 | 1_3:-23807774 | Msa0110750:CDS |
TCTCAACTTAGAGCTCCTAA+GGG | 0.649001 | 1_3:-23807528 | Msa0110750:CDS |
ATGCAATCTCATAAGAAGGA+GGG | 0.653021 | 1_3:+23810751 | None:intergenic |
CTATTGACAGGACCAAATGG+TGG | 0.654961 | 1_3:-23805421 | Msa0110750:CDS |
ACAGTGTTCTTGATGTTCAG+TGG | 0.655979 | 1_3:+23803521 | None:intergenic |
GACACGCAATGGTTATTCAG+TGG | 0.656780 | 1_3:-23813948 | Msa0110750:intron |
AACCCAGTAGCCACCCATGT+GGG | 0.658203 | 1_3:+23809465 | None:intergenic |
TTTGTCTTGACAGTGTATTG+TGG | 0.667793 | 1_3:-23813754 | Msa0110750:intron |
AAAGACCGGAAAGTTTCAAG+GGG | 0.668254 | 1_3:-23815336 | Msa0110750:CDS |
AGGAGCTCTAAGTTGAGACA+TGG | 0.668968 | 1_3:+23807533 | None:intergenic |
ACCTTAAGAACAGACACCGA+GGG | 0.669156 | 1_3:+23817189 | None:intergenic |
AGTATACCTGAGGAAACGAG+AGG | 0.669275 | 1_3:+23817005 | None:intergenic |
TCATTGCTGGAACCACCGAA+AGG | 0.673113 | 1_3:-23803685 | Msa0110750:CDS |
CAATAAGTCCATATACATAG+GGG | 0.675168 | 1_3:+23813486 | None:intergenic |
TGGTTCAACATAGCAGAAGG+AGG | 0.676802 | 1_3:-23805481 | Msa0110750:CDS |
GGCGGCCTCCACCTTCGTAG+TGG | 0.679029 | 1_3:+23807350 | None:intergenic |
TATTTCAGGAACGTCCAAGT+GGG | 0.679077 | 1_3:-23812033 | Msa0110750:intron |
TTTATCAGGAATTTCTCACG+AGG | 0.683454 | 1_3:-23803234 | Msa0110750:CDS |
TAAGCTACTTGAATGGAAGG+AGG | 0.685452 | 1_3:-23809589 | Msa0110750:CDS |
TGAAGAGCCTATAGTCATCG+GGG | 0.687428 | 1_3:+23803052 | None:intergenic |
GTATACCTGAGGAAACGAGA+GGG | 0.689641 | 1_3:+23817006 | None:intergenic |
GGTAATCCACTGCAATGTGG+TGG | 0.696559 | 1_3:+23811576 | None:intergenic |
ATGACAGACGGATAATCTCG+AGG | 0.699731 | 1_3:-23802338 | Msa0110750:intron |
GAAGAGCCTATAGTCATCGG+GGG | 0.700325 | 1_3:+23803053 | None:intergenic |
TAACCCAGTAGCCACCCATG+TGG | 0.701294 | 1_3:+23809464 | None:intergenic |
AGCTGCGATTATGTTCACAT+CGG | 0.701894 | 1_3:-23801975 | Msa0110750:three_prime_UTR |
ATATTTCATCAACAAGCACA+AGG | 0.705941 | 1_3:+23803660 | None:intergenic |
GTATTTCAGGAACGTCCAAG+TGG | 0.706411 | 1_3:-23812034 | Msa0110750:intron |
AACCTTAAGAACAGACACCG+AGG | 0.710075 | 1_3:+23817188 | None:intergenic |
TGACCAAAAGATCAGAAACA+GGG | 0.713078 | 1_3:+23811940 | None:intergenic |
AAGACCGGAAAGTTTCAAGG+GGG | 0.715418 | 1_3:-23815335 | Msa0110750:CDS |
TTTGGTAATCACAAGCAATG+TGG | 0.717978 | 1_3:+23807110 | None:intergenic |
CCCGGGAACAGGAAGCAGTG+TGG | 0.720310 | 1_3:-23807491 | Msa0110750:CDS |
GGAATGGTTTACCACTACGA+AGG | 0.726194 | 1_3:-23807361 | Msa0110750:CDS |
GAATTTCTCATTCGGCAAGG+GGG | 0.728126 | 1_3:-23812537 | Msa0110750:CDS |
AAAATGCCAATACCACAACA+GGG | 0.735670 | 1_3:+23814512 | None:intergenic |
CTTGTTGATGAAATATGCCG+AGG | 0.737644 | 1_3:-23803653 | Msa0110750:CDS |
ATTGGTAATCCACTGCAATG+TGG | 0.767045 | 1_3:+23811573 | None:intergenic |
GTCAAAATAGGGAATCACGG+CGG | 0.796421 | 1_3:+23805321 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAATAATAAAATTTAAAATA+TGG | + | chr1_3:23805109-23805128 | None:intergenic | 0.0% |
!!! | CATTTTATTTTATTTTGAAT+TGG | - | chr1_3:23802219-23802238 | Msa0110750:CDS | 10.0% |
!! | AAAAAAAAAATCAAATCAAA+AGG | + | chr1_3:23802515-23802534 | None:intergenic | 10.0% |
!!! | ATTTCTATTGTTTTATTTTA+TGG | - | chr1_3:23803572-23803591 | Msa0110750:CDS | 10.0% |
!!! | TTTTTATTACAAGTATTAAA+AGG | + | chr1_3:23804034-23804053 | None:intergenic | 10.0% |
!!! | AACATATTTTAAAAAGAAAA+GGG | + | chr1_3:23804354-23804373 | None:intergenic | 10.0% |
!!! | TATCTAAAATTTGTTTTATA+AGG | + | chr1_3:23805440-23805459 | None:intergenic | 10.0% |
!!! | TTTTGAATTATTATAAAAAG+AGG | - | chr1_3:23805842-23805861 | Msa0110750:intron | 10.0% |
!! | TTACAAAATAAATAAATCAA+TGG | + | chr1_3:23806151-23806170 | None:intergenic | 10.0% |
!! | GAATGAATTAATAAAAATAA+TGG | + | chr1_3:23806820-23806839 | None:intergenic | 10.0% |
!!! | ATAATTTAAAGTGAAAATTT+TGG | + | chr1_3:23807881-23807900 | None:intergenic | 10.0% |
!! | AATTAACATGAAAAAAATTA+TGG | - | chr1_3:23809976-23809995 | Msa0110750:intron | 10.0% |
!! | ACTAAGAATATAAATAATTA+TGG | - | chr1_3:23810032-23810051 | Msa0110750:intron | 10.0% |
!!! | ATTATAATTTAATTTCTCAA+GGG | + | chr1_3:23810426-23810445 | None:intergenic | 10.0% |
!!! | TATTATAATTTAATTTCTCA+AGG | + | chr1_3:23810427-23810446 | None:intergenic | 10.0% |
!! | TGAGAAATTAAATTATAATA+TGG | - | chr1_3:23810427-23810446 | Msa0110750:intron | 10.0% |
!!! | ATTTTGTGTATTTTTTTTTT+TGG | - | chr1_3:23813313-23813332 | Msa0110750:intron | 10.0% |
!! | ATTATCTTAAAGTTTATATA+AGG | - | chr1_3:23813874-23813893 | Msa0110750:intron | 10.0% |
!!! | TATTTTATTTTGAATTGGTA+AGG | - | chr1_3:23802272-23802291 | Msa0110750:CDS | 15.0% |
!!! | TATTGTTTTATTTTATGGTA+TGG | - | chr1_3:23803577-23803596 | Msa0110750:CDS | 15.0% |
!!! | ACATATTTTAAAAAGAAAAG+GGG | + | chr1_3:23804353-23804372 | None:intergenic | 15.0% |
!!! | GAACATATTTTAAAAAGAAA+AGG | + | chr1_3:23804355-23804374 | None:intergenic | 15.0% |
!!! | TAAGCTAAAAGAAATTTTAA+TGG | - | chr1_3:23804877-23804896 | Msa0110750:intron | 15.0% |
!! | TATTTATTTCAATAAAACTG+TGG | - | chr1_3:23804942-23804961 | Msa0110750:intron | 15.0% |
!! | TTATATATTTAATGTACCTT+TGG | - | chr1_3:23804986-23805005 | Msa0110750:intron | 15.0% |
!!! | TAAAATTTAAAATATGGAAG+TGG | + | chr1_3:23805103-23805122 | None:intergenic | 15.0% |
!!! | TGAAAGTTTTAACATTAAAT+CGG | + | chr1_3:23805476-23805495 | None:intergenic | 15.0% |
!! | ATCTAATTAGTAGTATAATT+AGG | + | chr1_3:23805604-23805623 | None:intergenic | 15.0% |
!!! | TTTGAGAAAAAAGTTTTAAA+GGG | - | chr1_3:23805783-23805802 | Msa0110750:intron | 15.0% |
!!! | TAATGCTATTTAATTGATTA+TGG | + | chr1_3:23805970-23805989 | None:intergenic | 15.0% |
!! | TTAAAAAATAAGCAGAATAA+GGG | + | chr1_3:23807910-23807929 | None:intergenic | 15.0% |
!! | ATTAAAAAATAAGCAGAATA+AGG | + | chr1_3:23807911-23807930 | None:intergenic | 15.0% |
!!! | TTGTATTTTATACGTAATTT+TGG | - | chr1_3:23808349-23808368 | Msa0110750:intron | 15.0% |
!! | AAATATTAGGTAAAAGTTAA+AGG | + | chr1_3:23808578-23808597 | None:intergenic | 15.0% |
!!! | CTTTTACCTAATATTTATTT+AGG | - | chr1_3:23808582-23808601 | Msa0110750:intron | 15.0% |
!!! | TAAATTTTCTTTTTCCAATT+TGG | - | chr1_3:23809265-23809284 | Msa0110750:intron | 15.0% |
!! | GAAATATTGAAACATTTAAT+TGG | - | chr1_3:23809512-23809531 | Msa0110750:CDS | 15.0% |
!!! | AGTTTTTATGAAACTAAAAA+AGG | - | chr1_3:23809847-23809866 | Msa0110750:intron | 15.0% |
!! | AAGAATATAAATAATTATGG+CGG | - | chr1_3:23810035-23810054 | Msa0110750:intron | 15.0% |
!!! | ATTTGTTAGTATTGAAATTT+AGG | - | chr1_3:23810082-23810101 | Msa0110750:intron | 15.0% |
!!! | TTTGTTAGTATTGAAATTTA+GGG | - | chr1_3:23810083-23810102 | Msa0110750:intron | 15.0% |
!!! | TAATGTTATATTTTTTTTCC+AGG | - | chr1_3:23811094-23811113 | Msa0110750:intron | 15.0% |
!!! | GTTTTGTTAAAAAATAAAAC+TGG | - | chr1_3:23811686-23811705 | Msa0110750:intron | 15.0% |
!! | ATATATGATTAAAATAGGAA+AGG | + | chr1_3:23811751-23811770 | None:intergenic | 15.0% |
!! | TTTGCATATATGATTAAAAT+AGG | + | chr1_3:23811756-23811775 | None:intergenic | 15.0% |
!! | AAAAACAATGATGTTTATAT+GGG | + | chr1_3:23811867-23811886 | None:intergenic | 15.0% |
!! | AAAAAACAATGATGTTTATA+TGG | + | chr1_3:23811868-23811887 | None:intergenic | 15.0% |
!!! | CAATTTTTAAGATAAACAAA+TGG | + | chr1_3:23812211-23812230 | None:intergenic | 15.0% |
!! | CATTTGTTTATCTTAAAAAT+TGG | - | chr1_3:23812209-23812228 | Msa0110750:intron | 15.0% |
!! | TTGGTTATTATTATGATATT+TGG | + | chr1_3:23813942-23813961 | None:intergenic | 15.0% |
!! | AAACAATAAAATAATTCCAA+AGG | - | chr1_3:23814017-23814036 | Msa0110750:intron | 15.0% |
!! | AACAATAAAATAATTCCAAA+GGG | - | chr1_3:23814018-23814037 | Msa0110750:intron | 15.0% |
!!! | TCTTTTTGTTTTATCAAAAT+TGG | + | chr1_3:23814424-23814443 | None:intergenic | 15.0% |
!! | GTTTGTTTCAAAATATTTCT+TGG | - | chr1_3:23802095-23802114 | Msa0110750:three_prime_UTR | 20.0% |
!! | ACCAATAATAATTTGAGAAA+AGG | - | chr1_3:23802380-23802399 | Msa0110750:intron | 20.0% |
!!! | TCCTTTTCTCAAATTATTAT+TGG | + | chr1_3:23802384-23802403 | None:intergenic | 20.0% |
!! | TTCTTACCAATTTCAATTAA+TGG | - | chr1_3:23802551-23802570 | Msa0110750:intron | 20.0% |
!! | AACAATTTCAAATACACATA+CGG | + | chr1_3:23803396-23803415 | None:intergenic | 20.0% |
!! | ACTTGTAATAAAAAAGTTGA+TGG | - | chr1_3:23804040-23804059 | Msa0110750:intron | 20.0% |
!!! | TCTTTTTAAAATATGTTCTC+AGG | - | chr1_3:23804357-23804376 | Msa0110750:intron | 20.0% |
!! | AAATACAAATTTATCACCTT+TGG | + | chr1_3:23804927-23804946 | None:intergenic | 20.0% |
!! | GATTTAATGTTAAAACTTTC+AGG | - | chr1_3:23805475-23805494 | Msa0110750:CDS | 20.0% |
!!! | GTTTGAGAAAAAAGTTTTAA+AGG | - | chr1_3:23805782-23805801 | Msa0110750:intron | 20.0% |
!! | ATGAGTTATGAATATATGTA+AGG | - | chr1_3:23806273-23806292 | Msa0110750:intron | 20.0% |
!! | GAAAAAAATGTGTATATTGT+TGG | - | chr1_3:23806312-23806331 | Msa0110750:intron | 20.0% |
!!! | TTTTATAGGAATTTCTCATT+CGG | - | chr1_3:23806456-23806475 | Msa0110750:intron | 20.0% |
!! | TTTGAAAATATGTGATGAAA+AGG | + | chr1_3:23806654-23806673 | None:intergenic | 20.0% |
!!! | ATATCTAGATTTTTCTGTTT+CGG | - | chr1_3:23806683-23806702 | Msa0110750:intron | 20.0% |
!!! | CATTTTCTTTTTCTTATATC+TGG | - | chr1_3:23807339-23807358 | Msa0110750:intron | 20.0% |
!!! | TATGTAAAATTTTAAGCGAA+CGG | + | chr1_3:23807530-23807549 | None:intergenic | 20.0% |
!! | TGATTGAATTGTAATTTCTA+AGG | - | chr1_3:23807614-23807633 | Msa0110750:intron | 20.0% |
!! | GAATAATACAATTATCTAAG+TGG | + | chr1_3:23807839-23807858 | None:intergenic | 20.0% |
!!! | AGTCTTTTAGTTATTAATTC+TGG | - | chr1_3:23807953-23807972 | Msa0110750:intron | 20.0% |
!! | AACAGACAATTACATAAATT+TGG | + | chr1_3:23807987-23808006 | None:intergenic | 20.0% |
!!! | GTTTTAAACTTGTTTATACT+TGG | - | chr1_3:23808011-23808030 | Msa0110750:intron | 20.0% |
!! | ATAAAAAGTAATGCAATAAG+AGG | + | chr1_3:23808110-23808129 | None:intergenic | 20.0% |
!!! | TTTGAAATAACCTTGAATTT+TGG | + | chr1_3:23808276-23808295 | None:intergenic | 20.0% |
!!! | TTTCCTCTGAAATAAAATAT+TGG | - | chr1_3:23808533-23808552 | Msa0110750:intron | 20.0% |
!!! | TTCCTCTGAAATAAAATATT+GGG | - | chr1_3:23808534-23808553 | Msa0110750:intron | 20.0% |
!! | AAAGGACCTAAATAAATATT+AGG | + | chr1_3:23808591-23808610 | None:intergenic | 20.0% |
!! | ACAAATCACAAAAAAGATAA+AGG | + | chr1_3:23808609-23808628 | None:intergenic | 20.0% |
!!! | ATCTTTTTTGTGATTTGTTT+TGG | - | chr1_3:23808611-23808630 | Msa0110750:intron | 20.0% |
!! | ATTTATCAGAAATAGACAAA+AGG | + | chr1_3:23808670-23808689 | None:intergenic | 20.0% |
!! | TAATTCAACTTAAGAATTCT+GGG | + | chr1_3:23808770-23808789 | None:intergenic | 20.0% |
!!! | AGAATTCTTAAGTTGAATTA+GGG | - | chr1_3:23808770-23808789 | Msa0110750:intron | 20.0% |
!! | ATTACGTTTATTTAGTGAAA+AGG | - | chr1_3:23808968-23808987 | Msa0110750:intron | 20.0% |
!!! | AAAACTATTTTCAAGCAAAA+AGG | + | chr1_3:23809134-23809153 | None:intergenic | 20.0% |
!!! | TTATTTTCATATAAGCAAAG+TGG | + | chr1_3:23809615-23809634 | None:intergenic | 20.0% |
!! | CTTTGCTTATATGAAAATAA+AGG | - | chr1_3:23809615-23809634 | Msa0110750:intron | 20.0% |
!!! | TTTTTTCATGTTAATTGAAC+AGG | + | chr1_3:23809972-23809991 | None:intergenic | 20.0% |
!!! | TAATTTTTTGTGCATATACT+AGG | - | chr1_3:23810192-23810211 | Msa0110750:intron | 20.0% |
!! | ATTAGTATCCTGATTTAATT+AGG | + | chr1_3:23810226-23810245 | None:intergenic | 20.0% |
!! | TTGTTATATATAATAACACC+TGG | + | chr1_3:23810608-23810627 | None:intergenic | 20.0% |
!! | TTTATATCCTAAATTTCTTG+TGG | + | chr1_3:23810680-23810699 | None:intergenic | 20.0% |
!!! | GATTTTATGTATTTTAAAGC+TGG | - | chr1_3:23810975-23810994 | Msa0110750:intron | 20.0% |
!! | AACACTTTATACCAAATATA+TGG | - | chr1_3:23811543-23811562 | Msa0110750:intron | 20.0% |
!!! | TTATAGTATTGGCTTATTTA+TGG | - | chr1_3:23812278-23812297 | Msa0110750:intron | 20.0% |
!! | TAATTAGCATAAAATATGCA+AGG | + | chr1_3:23812550-23812569 | None:intergenic | 20.0% |
!! | TATAAAAACTTGATGTGTTA+TGG | - | chr1_3:23812654-23812673 | Msa0110750:intron | 20.0% |
!! | ATAAAAACTTGATGTGTTAT+GGG | - | chr1_3:23812655-23812674 | Msa0110750:intron | 20.0% |
!!! | TGTGTATTTTTTTTTTTGGA+AGG | - | chr1_3:23813317-23813336 | Msa0110750:intron | 20.0% |
!!! | TTATTGTTTCTTGTGATTTA+AGG | + | chr1_3:23814006-23814025 | None:intergenic | 20.0% |
!! | TAGTAAAAAATGTATGTTTG+TGG | - | chr1_3:23814622-23814641 | Msa0110750:CDS | 20.0% |
!! | TTAATAACTTAAACAGCATA+TGG | - | chr1_3:23814793-23814812 | Msa0110750:intron | 20.0% |
!!! | ATGTACTATTAAAGTATTCA+CGG | - | chr1_3:23815078-23815097 | Msa0110750:CDS | 20.0% |
!!! | ATAATTGTTGATTCTAGTTT+TGG | + | chr1_3:23815124-23815143 | None:intergenic | 20.0% |
!! | TAAGAAGGATAAAATGTTTA+AGG | + | chr1_3:23815258-23815277 | None:intergenic | 20.0% |
!! | ATCAATGGTAATAATTCTAA+TGG | - | chr1_3:23815723-23815742 | Msa0110750:intron | 20.0% |
!! | TCAATGGTAATAATTCTAAT+GGG | - | chr1_3:23815724-23815743 | Msa0110750:intron | 20.0% |
!!! | AATTCCTGATAAAAACTTTT+CGG | + | chr1_3:23815760-23815779 | None:intergenic | 20.0% |
!!! | AAGATAAAGTGTTTCTTAAT+TGG | - | chr1_3:23815909-23815928 | Msa0110750:intron | 20.0% |
!! | AATTGATAAAAAGAATGAGT+TGG | + | chr1_3:23816152-23816171 | None:intergenic | 20.0% |
!!! | TAGGATTATTTTTTTATGTG+AGG | + | chr1_3:23816184-23816203 | None:intergenic | 20.0% |
!!! | GACTAAAAACAATTGTTATT+AGG | + | chr1_3:23816271-23816290 | None:intergenic | 20.0% |
!! | AAATGATAAACATTCCAAAA+AGG | + | chr1_3:23816617-23816636 | None:intergenic | 20.0% |
!!! | GTTTACTCACAATATTATTT+TGG | - | chr1_3:23816905-23816924 | Msa0110750:intron | 20.0% |
!! | TTTCATCAGTAAAACTTAAA+AGG | + | chr1_3:23816960-23816979 | None:intergenic | 20.0% |
!!! | AAGTTTTACTGATGAAATTT+AGG | - | chr1_3:23816963-23816982 | Msa0110750:intron | 20.0% |
!! | GAAATTATTGTATGTTGTAT+TGG | - | chr1_3:23817057-23817076 | Msa0110750:CDS | 20.0% |
!!! | TTATTCAATTTGTTGAGTTG+AGG | + | chr1_3:23801874-23801893 | None:intergenic | 25.0% |
!!! | GATTTTGTTATTTGAAGTAG+TGG | - | chr1_3:23802316-23802335 | Msa0110750:CDS | 25.0% |
! | TTACCAATTTCAATTAATGG+AGG | - | chr1_3:23802554-23802573 | Msa0110750:intron | 25.0% |
! | TTACCTCCATTAATTGAAAT+TGG | + | chr1_3:23802560-23802579 | None:intergenic | 25.0% |
! | TAAGTGCATGTTTGAATTAA+TGG | - | chr1_3:23802662-23802681 | Msa0110750:intron | 25.0% |
!! | TCATTTTCTCAAATTACTAC+CGG | + | chr1_3:23802737-23802756 | None:intergenic | 25.0% |
!! | TATAGATTGAATCTTTTTGC+TGG | - | chr1_3:23803002-23803021 | Msa0110750:intron | 25.0% |
!!! | AAGATCAATATTGCTTTTGA+AGG | - | chr1_3:23803026-23803045 | Msa0110750:CDS | 25.0% |
! | TGAAATTGTTAGAATGCAAA+TGG | - | chr1_3:23803406-23803425 | Msa0110750:CDS | 25.0% |
!! | TTCCTTCTAAATTTAGAATG+AGG | + | chr1_3:23803492-23803511 | None:intergenic | 25.0% |
! | ATTTCGATGAATAGAACAAA+TGG | - | chr1_3:23803617-23803636 | Msa0110750:CDS | 25.0% |
!!! | AGATATCATGTTTTAAAGAC+CGG | - | chr1_3:23803651-23803670 | Msa0110750:CDS | 25.0% |
! | TTCACAGAGGAAAAAAATTA+AGG | + | chr1_3:23803784-23803803 | None:intergenic | 25.0% |
!! | GGTTTTCTATAAATATTCTG+TGG | + | chr1_3:23803842-23803861 | None:intergenic | 25.0% |
! | GAAACAAGAAAAAGAAAGTA+AGG | + | chr1_3:23803863-23803882 | None:intergenic | 25.0% |
! | TCAATTAGATTCATTGTTGA+GGG | + | chr1_3:23803925-23803944 | None:intergenic | 25.0% |
! | TTCAATTAGATTCATTGTTG+AGG | + | chr1_3:23803926-23803945 | None:intergenic | 25.0% |
! | CAACAATGAATCTAATTGAA+AGG | - | chr1_3:23803926-23803945 | Msa0110750:intron | 25.0% |
! | ATAGATTCTAACTTGAAGAA+TGG | - | chr1_3:23803973-23803992 | Msa0110750:intron | 25.0% |
!! | GTCTTGTGTATTTAGTTTAA+AGG | - | chr1_3:23804231-23804250 | Msa0110750:intron | 25.0% |
!!! | AAACAGAAATTTGTTGAGAA+TGG | + | chr1_3:23804268-23804287 | None:intergenic | 25.0% |
!! | TTTAAAATATGTTCTCAGGT+TGG | - | chr1_3:23804361-23804380 | Msa0110750:intron | 25.0% |
! | TTGTATTCTTGTTGAATATG+CGG | - | chr1_3:23804414-23804433 | Msa0110750:intron | 25.0% |
!! | TCAAGCTGTTTAATTTACAT+TGG | - | chr1_3:23804605-23804624 | Msa0110750:intron | 25.0% |
!!! | AAGTTTTAAAGGGAAAAAGT+AGG | - | chr1_3:23805793-23805812 | Msa0110750:intron | 25.0% |
! | ATTTGAAAGGATTTCTCATT+TGG | - | chr1_3:23806066-23806085 | Msa0110750:intron | 25.0% |
!!! | AACAATGCGTCTTTTTTTAT+AGG | - | chr1_3:23806442-23806461 | Msa0110750:intron | 25.0% |
! | AATCAAATCAAGTAGAAGAA+AGG | + | chr1_3:23806714-23806733 | None:intergenic | 25.0% |
! | ATTACCAATATTGTGAGTAA+AGG | - | chr1_3:23807442-23807461 | Msa0110750:CDS | 25.0% |
! | AAATCCTTTACTCACAATAT+TGG | + | chr1_3:23807449-23807468 | None:intergenic | 25.0% |
!! | ACAATGATGTTAATTTGGTA+AGG | + | chr1_3:23808186-23808205 | None:intergenic | 25.0% |
! | AACAGACAATGATGTTAATT+TGG | + | chr1_3:23808191-23808210 | None:intergenic | 25.0% |
! | CTAATTCAACTTAAGAATTC+TGG | + | chr1_3:23808771-23808790 | None:intergenic | 25.0% |
!!! | CAGAATTCTTAAGTTGAATT+AGG | - | chr1_3:23808769-23808788 | Msa0110750:intron | 25.0% |
!!! | ATTCAAGTACATTTTTGACT+GGG | - | chr1_3:23808936-23808955 | Msa0110750:intron | 25.0% |
! | ATATTGTCTTTGCCTTAAAA+AGG | - | chr1_3:23809197-23809216 | Msa0110750:intron | 25.0% |
!!! | AAAACGGTTGATAGAAAAAA+GGG | + | chr1_3:23809335-23809354 | None:intergenic | 25.0% |
!!! | TAAAACGGTTGATAGAAAAA+AGG | + | chr1_3:23809336-23809355 | None:intergenic | 25.0% |
! | CATTTGCATACACAATAAAA+CGG | + | chr1_3:23809351-23809370 | None:intergenic | 25.0% |
! | TCTACAAAGTTCAATATGAT+TGG | + | chr1_3:23809438-23809457 | None:intergenic | 25.0% |
!! | TAAATATGATAAGGGGATTT+TGG | + | chr1_3:23809716-23809735 | None:intergenic | 25.0% |
! | AAAATCCCCTTATCATATTT+AGG | - | chr1_3:23809715-23809734 | Msa0110750:intron | 25.0% |
! | AGTAGTCCTAAATATGATAA+GGG | + | chr1_3:23809724-23809743 | None:intergenic | 25.0% |
!!! | ATGAACAAAGTTGATGAAAA+CGG | + | chr1_3:23809919-23809938 | None:intergenic | 25.0% |
!! | TAATTGAACAGGAGTATAAA+AGG | + | chr1_3:23809961-23809980 | None:intergenic | 25.0% |
!! | AAGATAGAGACTTTGAATTT+TGG | - | chr1_3:23810133-23810152 | Msa0110750:intron | 25.0% |
!! | AGATAGAGACTTTGAATTTT+GGG | - | chr1_3:23810134-23810153 | Msa0110750:intron | 25.0% |
! | ATCCTGATTTAATTAGGATT+AGG | + | chr1_3:23810220-23810239 | None:intergenic | 25.0% |
!!! | TCTATTCATGTTTTTTCTTG+AGG | + | chr1_3:23810456-23810475 | None:intergenic | 25.0% |
! | AAACACAACTTATTTGATGT+TGG | - | chr1_3:23810475-23810494 | Msa0110750:intron | 25.0% |
! | TTGGAATATTATTCAATTCC+AGG | - | chr1_3:23810587-23810606 | Msa0110750:CDS | 25.0% |
! | TAGTATTGTGATAGTATGTT+TGG | + | chr1_3:23810947-23810966 | None:intergenic | 25.0% |
! | ATATCGTCAAAAAATTCATC+AGG | + | chr1_3:23811212-23811231 | None:intergenic | 25.0% |
!!! | TGATGAATTTTTTGACGATA+TGG | - | chr1_3:23811211-23811230 | Msa0110750:intron | 25.0% |
!!! | AGCTTTTATTCTAGAAACTA+CGG | + | chr1_3:23811447-23811466 | None:intergenic | 25.0% |
! | TTTATACCAAATATATGGAC+TGG | - | chr1_3:23811548-23811567 | Msa0110750:intron | 25.0% |
!! | AAACATGCTTTAGATTCTAA+AGG | - | chr1_3:23811602-23811621 | Msa0110750:CDS | 25.0% |
!! | TTTAGATTCTAAAGGTAGAA+AGG | - | chr1_3:23811610-23811629 | Msa0110750:CDS | 25.0% |
! | TATGCAAAACAATTTGTCAT+AGG | - | chr1_3:23811768-23811787 | Msa0110750:CDS | 25.0% |
!!! | TAGAGTTTTGGAACTTTTAA+GGG | - | chr1_3:23811820-23811839 | Msa0110750:intron | 25.0% |
! | TTGATTGAAAAATGCGTTTA+TGG | - | chr1_3:23812113-23812132 | Msa0110750:intron | 25.0% |
! | TGATTGAAAAATGCGTTTAT+GGG | - | chr1_3:23812114-23812133 | Msa0110750:intron | 25.0% |
!!! | AAGTATTGAATTGTCAATGA+TGG | - | chr1_3:23812160-23812179 | Msa0110750:intron | 25.0% |
!! | CAATAGTGATTTCACAATTT+TGG | + | chr1_3:23812244-23812263 | None:intergenic | 25.0% |
!!! | CAGTGATAGTTTTATAGTAT+TGG | - | chr1_3:23812267-23812286 | Msa0110750:intron | 25.0% |
! | TAAAAACTTGATGTGTTATG+GGG | - | chr1_3:23812656-23812675 | Msa0110750:intron | 25.0% |
! | GAATATCCTAGAATATTCAA+CGG | + | chr1_3:23812734-23812753 | None:intergenic | 25.0% |
!!! | TGTTTTGAAGCTATGTATTT+AGG | - | chr1_3:23813281-23813300 | Msa0110750:intron | 25.0% |
!!! | GTTTTGAAGCTATGTATTTA+GGG | - | chr1_3:23813282-23813301 | Msa0110750:intron | 25.0% |
!!! | TTTTGAAGCTATGTATTTAG+GGG | - | chr1_3:23813283-23813302 | Msa0110750:intron | 25.0% |
! | AATAAAGAACAGCTAGTAAA+TGG | + | chr1_3:23813385-23813404 | None:intergenic | 25.0% |
!! | TAGTTGGTTTATTACCATAT+TGG | - | chr1_3:23813500-23813519 | Msa0110750:CDS | 25.0% |
!!! | CAATCATTATTTCTATTGAC+AGG | - | chr1_3:23813568-23813587 | Msa0110750:intron | 25.0% |
! | CCAACTATAGATGAATTTAA+GGG | + | chr1_3:23813789-23813808 | None:intergenic | 25.0% |
! | TCCAACTATAGATGAATTTA+AGG | + | chr1_3:23813790-23813809 | None:intergenic | 25.0% |
! | ATTGCTTCATTGTCTATATA+AGG | - | chr1_3:23813825-23813844 | Msa0110750:intron | 25.0% |
!! | GATTATCTGAAACTCTTAAT+AGG | + | chr1_3:23813966-23813985 | None:intergenic | 25.0% |
! | ATAAAATAATTCCAAAGGGT+TGG | - | chr1_3:23814022-23814041 | Msa0110750:intron | 25.0% |
! | AATATCATATGCCTTAATTG+CGG | + | chr1_3:23814048-23814067 | None:intergenic | 25.0% |
!! | AGTGAAACTTTTTGCTTAAA+TGG | - | chr1_3:23814077-23814096 | Msa0110750:intron | 25.0% |
!! | TTTTTGCTTAAATGGATAGT+TGG | - | chr1_3:23814085-23814104 | Msa0110750:intron | 25.0% |
!!! | AGATTTTCATTTTTCATCTC+AGG | - | chr1_3:23814315-23814334 | Msa0110750:intron | 25.0% |
!! | TAGAGTCATACATTTTATAG+CGG | + | chr1_3:23814353-23814372 | None:intergenic | 25.0% |
!! | TAAGTTATTAATTGCTGGTT+TGG | + | chr1_3:23814784-23814803 | None:intergenic | 25.0% |
!! | CTGTTTAAGTTATTAATTGC+TGG | + | chr1_3:23814789-23814808 | None:intergenic | 25.0% |
!! | AGAATTTGATATTTTGTGCT+TGG | - | chr1_3:23814910-23814929 | Msa0110750:CDS | 25.0% |
!! | TGTACTATTAAAGTATTCAC+GGG | - | chr1_3:23815079-23815098 | Msa0110750:CDS | 25.0% |
! | AACAGACAACATATAGTATT+CGG | + | chr1_3:23815213-23815232 | None:intergenic | 25.0% |
!! | ACATTTTATCCTTCTTAACA+TGG | - | chr1_3:23815261-23815280 | Msa0110750:CDS | 25.0% |
!! | CATTTTATCCTTCTTAACAT+GGG | - | chr1_3:23815262-23815281 | Msa0110750:CDS | 25.0% |
!!! | TTTTTAGTCAAAACCTCTAT+AGG | - | chr1_3:23816282-23816301 | Msa0110750:intron | 25.0% |
! | AATACATATAATCAGATCGA+CGG | - | chr1_3:23816468-23816487 | Msa0110750:intron | 25.0% |
!!! | TATCTTGATTTGTATTGACA+AGG | - | chr1_3:23816567-23816586 | Msa0110750:intron | 25.0% |
! | GATTGTAAGTACATATTAGT+TGG | - | chr1_3:23817079-23817098 | Msa0110750:CDS | 25.0% |
!!! | ATATACCTGTTTTAGTATGT+TGG | + | chr1_3:23817149-23817168 | None:intergenic | 25.0% |
!! | TTTTTACCAAGAATGATATG+TGG | + | chr1_3:23817194-23817213 | None:intergenic | 25.0% |
! | GTAAAAATGTTCAGTTTCTA+TGG | - | chr1_3:23817207-23817226 | Msa0110750:five_prime_UTR | 25.0% |
AAATCGAATGTAATCACATG+TGG | - | chr1_3:23802406-23802425 | Msa0110750:intron | 30.0% | |
! | GAGGTAAATAATACTAGTCT+TGG | - | chr1_3:23802573-23802592 | Msa0110750:intron | 30.0% |
GTAATCACATATGTTAGTGT+TGG | - | chr1_3:23802768-23802787 | Msa0110750:intron | 30.0% | |
!! | AGCTACAACAATTTTGACAA+AGG | + | chr1_3:23802848-23802867 | None:intergenic | 30.0% |
TGAGACTTAAAGAAAACTGT+TGG | - | chr1_3:23802950-23802969 | Msa0110750:intron | 30.0% | |
! | TTTTAGGCCTCCAAAAAATT+GGG | + | chr1_3:23803158-23803177 | None:intergenic | 30.0% |
AGTAACAAAAAACTGCGAAT+AGG | + | chr1_3:23803261-23803280 | None:intergenic | 30.0% | |
GTGATTAAGATGTTATGCTA+TGG | - | chr1_3:23803359-23803378 | Msa0110750:CDS | 30.0% | |
TAGAATGCAAATGGTATACT+CGG | - | chr1_3:23803415-23803434 | Msa0110750:CDS | 30.0% | |
!!! | ATCCTTTGTTTTCTGTTAGA+TGG | - | chr1_3:23803444-23803463 | Msa0110750:CDS | 30.0% |
GTCCTCATTCTAAATTTAGA+AGG | - | chr1_3:23803487-23803506 | Msa0110750:CDS | 30.0% | |
!!! | GGAAAAATGCTCTAGTTTTT+CGG | - | chr1_3:23803508-23803527 | Msa0110750:CDS | 30.0% |
AAGATCTTTCTCACATATTG+TGG | - | chr1_3:23803741-23803760 | Msa0110750:intron | 30.0% | |
!!! | ATTTTTTTCCTCTGTGAACA+TGG | - | chr1_3:23803786-23803805 | Msa0110750:intron | 30.0% |
! | CTTGAATACTCAAATTTGCT+TGG | - | chr1_3:23803949-23803968 | Msa0110750:intron | 30.0% |
ATTCTAACTTGAAGAATGGA+AGG | - | chr1_3:23803977-23803996 | Msa0110750:intron | 30.0% | |
TGTATTCTTGTTGAATATGC+GGG | - | chr1_3:23804415-23804434 | Msa0110750:intron | 30.0% | |
! | TTTTATATTAGTGCCCTGAT+TGG | - | chr1_3:23804561-23804580 | Msa0110750:intron | 30.0% |
AAGAAATACTTGACAAAAGC+TGG | + | chr1_3:23804667-23804686 | None:intergenic | 30.0% | |
TCAAAGTCTAGCAATAATCA+TGG | + | chr1_3:23804733-23804752 | None:intergenic | 30.0% | |
TGATGTTGATCTTTCGTTAA+TGG | - | chr1_3:23804761-23804780 | Msa0110750:intron | 30.0% | |
AACACTCAGAATATTGATCA+AGG | + | chr1_3:23804796-23804815 | None:intergenic | 30.0% | |
AATAAAACTGTGGTTCAATG+TGG | - | chr1_3:23804952-23804971 | Msa0110750:intron | 30.0% | |
! | TTCTTTGGTTTCAGAATCTT+AGG | - | chr1_3:23805013-23805032 | Msa0110750:intron | 30.0% |
TGAAAGATGCTATAAATGAC+AGG | + | chr1_3:23805159-23805178 | None:intergenic | 30.0% | |
AGATATAAAACGACGTTTCT+TGG | + | chr1_3:23805303-23805322 | None:intergenic | 30.0% | |
!! | AAGAAACGTCGTTTTATATC+TGG | - | chr1_3:23805302-23805321 | Msa0110750:CDS | 30.0% |
!! | AGAAACGTCGTTTTATATCT+GGG | - | chr1_3:23805303-23805322 | Msa0110750:CDS | 30.0% |
TAAGTACAGTATTCTCCAAT+TGG | - | chr1_3:23805326-23805345 | Msa0110750:CDS | 30.0% | |
CAATAAGTCCATATACATAG+GGG | + | chr1_3:23805518-23805537 | None:intergenic | 30.0% | |
CCAATAAGTCCATATACATA+GGG | + | chr1_3:23805519-23805538 | None:intergenic | 30.0% | |
CCTATGTATATGGACTTATT+GGG | - | chr1_3:23805517-23805536 | Msa0110750:CDS | 30.0% | |
CTATGTATATGGACTTATTG+GGG | - | chr1_3:23805518-23805537 | Msa0110750:CDS | 30.0% | |
!! | ATTTCTCTTTAGGCTTTGTT+TGG | - | chr1_3:23805684-23805703 | Msa0110750:intron | 30.0% |
ATTGATTATGGCTTAGAGTT+AGG | + | chr1_3:23805958-23805977 | None:intergenic | 30.0% | |
! | TTTTCGACTTTACTATACGA+GGG | + | chr1_3:23806024-23806043 | None:intergenic | 30.0% |
!! | TTTTTCGACTTTACTATACG+AGG | + | chr1_3:23806025-23806044 | None:intergenic | 30.0% |
ATCCTTTCAAATTGCAACAT+TGG | + | chr1_3:23806058-23806077 | None:intergenic | 30.0% | |
!! | TATTGTTGGTTTACCATACT+CGG | - | chr1_3:23806326-23806345 | Msa0110750:intron | 30.0% |
GTCTAAAGATGTACTATCAA+TGG | + | chr1_3:23806401-23806420 | None:intergenic | 30.0% | |
AGTACATCTTTAGACTACAT+TGG | - | chr1_3:23806406-23806425 | Msa0110750:CDS | 30.0% | |
! | TTCTGAAGAATATGTCTTCA+TGG | + | chr1_3:23806515-23806534 | None:intergenic | 30.0% |
! | TATTTCTGCATACATCTTTG+AGG | - | chr1_3:23806593-23806612 | Msa0110750:intron | 30.0% |
GTTATGTAGTTTAACTAGCT+TGG | - | chr1_3:23806761-23806780 | Msa0110750:intron | 30.0% | |
TCTCATCTCAAACACATTTA+TGG | - | chr1_3:23806901-23806920 | Msa0110750:intron | 30.0% | |
!!! | GTATTTTAGTAGCGTATTTC+AGG | - | chr1_3:23806954-23806973 | Msa0110750:intron | 30.0% |
CTTACATGTGTATTTCACTT+TGG | - | chr1_3:23807169-23807188 | Msa0110750:CDS | 30.0% | |
!! | TGTATTTCACTTTGGAACAT+AGG | - | chr1_3:23807177-23807196 | Msa0110750:CDS | 30.0% |
AACATCTACTCAAATTGGTT+GGG | - | chr1_3:23807288-23807307 | Msa0110750:intron | 30.0% | |
! | TAAACATTGATTATGCTTGC+TGG | - | chr1_3:23807315-23807334 | Msa0110750:intron | 30.0% |
! | AGCATGGAATGATTTTCAAT+AGG | + | chr1_3:23807487-23807506 | None:intergenic | 30.0% |
AATAGAGCAGTGTGAATAAA+AGG | + | chr1_3:23807667-23807686 | None:intergenic | 30.0% | |
!! | ACTTTTGTTTCCCTTAATTC+TGG | - | chr1_3:23807712-23807731 | Msa0110750:CDS | 30.0% |
AAAAATAAGCAGAATAAGGG+AGG | + | chr1_3:23807907-23807926 | None:intergenic | 30.0% | |
TAATGCAATAAGAGGAACAA+GGG | + | chr1_3:23808102-23808121 | None:intergenic | 30.0% | |
ACATCATTGTCTGTTTACTT+TGG | - | chr1_3:23808196-23808215 | Msa0110750:intron | 30.0% | |
AGCTGAGATAAAATTTGAAC+TGG | + | chr1_3:23808330-23808349 | None:intergenic | 30.0% | |
!! | AGCCCAATATTTTATTTCAG+AGG | + | chr1_3:23808539-23808558 | None:intergenic | 30.0% |
! | TGACAGTTAACTTTTACATG+TGG | - | chr1_3:23808701-23808720 | Msa0110750:intron | 30.0% |
TGAATGTTCTTACTCAATGT+TGG | + | chr1_3:23808921-23808940 | None:intergenic | 30.0% | |
! | CATTCAAGTACATTTTTGAC+TGG | - | chr1_3:23808935-23808954 | Msa0110750:intron | 30.0% |
! | AGGCTCTAATCATAGTAATT+AGG | + | chr1_3:23809114-23809133 | None:intergenic | 30.0% |
! | TAGTCACATGAACCTTTTTA+AGG | + | chr1_3:23809212-23809231 | None:intergenic | 30.0% |
CGCAGTATTAAAAACCAAAT+TGG | + | chr1_3:23809282-23809301 | None:intergenic | 30.0% | |
!! | AAACGGTTGATAGAAAAAAG+GGG | + | chr1_3:23809334-23809353 | None:intergenic | 30.0% |
AAAATAGTGACGAGTTAAAC+AGG | + | chr1_3:23809380-23809399 | None:intergenic | 30.0% | |
! | AGGAAACAAAATCCAAGTTT+TGG | + | chr1_3:23809591-23809610 | None:intergenic | 30.0% |
TTTCATATAAGCAAAGTGGA+AGG | + | chr1_3:23809611-23809630 | None:intergenic | 30.0% | |
GTAGTCCTAAATATGATAAG+GGG | + | chr1_3:23809723-23809742 | None:intergenic | 30.0% | |
CAGTAGTCCTAAATATGATA+AGG | + | chr1_3:23809725-23809744 | None:intergenic | 30.0% | |
TGTTGTTCAGTTTACAATTG+TGG | - | chr1_3:23809798-23809817 | Msa0110750:intron | 30.0% | |
TAAATAATTATGGCGGTGTA+TGG | - | chr1_3:23810042-23810061 | Msa0110750:intron | 30.0% | |
!!! | GAAATTTAGGGTTTTAGACA+AGG | - | chr1_3:23810095-23810114 | Msa0110750:intron | 30.0% |
CTCCTAATCCTAATTAAATC+AGG | - | chr1_3:23810215-23810234 | Msa0110750:intron | 30.0% | |
ATCATGTTGTGTTAACTTTC+TGG | + | chr1_3:23810527-23810546 | None:intergenic | 30.0% | |
ATCTGAATATTGCATAACGA+AGG | - | chr1_3:23810552-23810571 | Msa0110750:intron | 30.0% | |
GTTTACACCACAAGAAATTT+AGG | - | chr1_3:23810670-23810689 | Msa0110750:intron | 30.0% | |
TGTATGTGATGAATGATCAA+CGG | + | chr1_3:23810741-23810760 | None:intergenic | 30.0% | |
CAACTAATTCATCACTAACT+TGG | - | chr1_3:23810801-23810820 | Msa0110750:intron | 30.0% | |
!!! | ATATTTTTTTTCCAGGTTGC+TGG | - | chr1_3:23811101-23811120 | Msa0110750:intron | 30.0% |
AAGTAAGCACATCATTTATG+TGG | + | chr1_3:23811268-23811287 | None:intergenic | 30.0% | |
!! | CTTAACTTGCAAATAGCTAT+AGG | + | chr1_3:23811351-23811370 | None:intergenic | 30.0% |
TATTGTCCCAAAAATCTTTC+AGG | - | chr1_3:23811403-23811422 | Msa0110750:intron | 30.0% | |
!! | GCTTTTATTCTAGAAACTAC+GGG | + | chr1_3:23811446-23811465 | None:intergenic | 30.0% |
GAATAAGATATTTCTCCCTT+AGG | + | chr1_3:23811491-23811510 | None:intergenic | 30.0% | |
TAACAAAACACACCTTGATA+AGG | + | chr1_3:23811675-23811694 | None:intergenic | 30.0% | |
!!! | CTAGAGTTTTGGAACTTTTA+AGG | - | chr1_3:23811819-23811838 | Msa0110750:intron | 30.0% |
!!! | AGAGTTTTGGAACTTTTAAG+GGG | - | chr1_3:23811821-23811840 | Msa0110750:intron | 30.0% |
AAATAAAGCAGAAGCAACAA+AGG | + | chr1_3:23811949-23811968 | None:intergenic | 30.0% | |
!!! | TTGCTTCTGCTTTATTTTTG+TGG | - | chr1_3:23811952-23811971 | Msa0110750:CDS | 30.0% |
!!! | TTCTGCTTTATTTTTGTGGA+TGG | - | chr1_3:23811956-23811975 | Msa0110750:CDS | 30.0% |
AAAATCATCAATACACTGCA+AGG | + | chr1_3:23811989-23812008 | None:intergenic | 30.0% | |
AAGATCAATCAAATCCAAAG+AGG | + | chr1_3:23812019-23812038 | None:intergenic | 30.0% | |
ACAAATGGAGCAAAATACTA+TGG | + | chr1_3:23812196-23812215 | None:intergenic | 30.0% | |
! | TGGAAGTATGATTGAATTTG+TGG | + | chr1_3:23812373-23812392 | None:intergenic | 30.0% |
AATCATACTTCCACATTTCA+AGG | - | chr1_3:23812380-23812399 | Msa0110750:intron | 30.0% | |
! | GCAATATTTTCCTTGAAATG+TGG | + | chr1_3:23812393-23812412 | None:intergenic | 30.0% |
!! | GAAATCATCACTTTTCTCTT+TGG | - | chr1_3:23812522-23812541 | Msa0110750:CDS | 30.0% |
ATATACTACCTCAAACTTCT+GGG | + | chr1_3:23812637-23812656 | None:intergenic | 30.0% | |
TATATACTACCTCAAACTTC+TGG | + | chr1_3:23812638-23812657 | None:intergenic | 30.0% | |
! | ATTTAAACTTTTGTCTCCTG+AGG | + | chr1_3:23812921-23812940 | None:intergenic | 30.0% |
ACAAAAGTTTAAATCCCCTA+GGG | - | chr1_3:23812927-23812946 | Msa0110750:intron | 30.0% | |
AAGTTCTATTTACCACACAA+AGG | - | chr1_3:23813048-23813067 | Msa0110750:intron | 30.0% | |
CTACAATTCTTTACAGAAAG+AGG | + | chr1_3:23813218-23813237 | None:intergenic | 30.0% | |
! | CTTCATCTTGCGATTTTTAT+CGG | + | chr1_3:23813479-23813498 | None:intergenic | 30.0% |
GTGGTAAATCAAGTTTACTT+CGG | - | chr1_3:23813602-23813621 | Msa0110750:intron | 30.0% | |
AGCATGATAGAGTCAAAATA+GGG | + | chr1_3:23813694-23813713 | None:intergenic | 30.0% | |
AAGCATGATAGAGTCAAAAT+AGG | + | chr1_3:23813695-23813714 | None:intergenic | 30.0% | |
CCCTTAAATTCATCTATAGT+TGG | - | chr1_3:23813786-23813805 | Msa0110750:intron | 30.0% | |
!!! | TTTTGATGTCTGGCTTTATT+TGG | + | chr1_3:23813912-23813931 | None:intergenic | 30.0% |
!!! | TGGTTTGTTATTTTGATGTC+TGG | + | chr1_3:23813922-23813941 | None:intergenic | 30.0% |
! | TCTGAAACTCTTAATAGGAT+TGG | + | chr1_3:23813961-23813980 | None:intergenic | 30.0% |
! | TCACTAGCTTCTTACAAATA+TGG | + | chr1_3:23814146-23814165 | None:intergenic | 30.0% |
GAACATGTGTTTATAAGTGT+TGG | - | chr1_3:23814680-23814699 | Msa0110750:intron | 30.0% | |
! | CACTCTTAGAATTTTCAGTT+AGG | + | chr1_3:23814751-23814770 | None:intergenic | 30.0% |
GTAACAAGAGAAAAAGAGTA+CGG | - | chr1_3:23814815-23814834 | Msa0110750:intron | 30.0% | |
CTGATATGGTGATATTAGAA+GGG | + | chr1_3:23815007-23815026 | None:intergenic | 30.0% | |
TCTGATATGGTGATATTAGA+AGG | + | chr1_3:23815008-23815027 | None:intergenic | 30.0% | |
ACTATAACAGAGGAATGAAA+AGG | + | chr1_3:23815045-23815064 | None:intergenic | 30.0% | |
! | GTACTATTAAAGTATTCACG+GGG | - | chr1_3:23815080-23815099 | Msa0110750:CDS | 30.0% |
!! | AATAGTTGTCTGTTGCTTTA+TGG | - | chr1_3:23815181-23815200 | Msa0110750:intron | 30.0% |
ACAGACAACATATAGTATTC+GGG | + | chr1_3:23815212-23815231 | None:intergenic | 30.0% | |
ATATTTCATCAACAAGCACA+AGG | + | chr1_3:23815344-23815363 | None:intergenic | 30.0% | |
ATTGAAACTCTTGATAGAAG+TGG | - | chr1_3:23815411-23815430 | Msa0110750:intron | 30.0% | |
GAATTGTCTAGTTACATCAA+TGG | - | chr1_3:23815708-23815727 | Msa0110750:intron | 30.0% | |
! | CATTCCGAAAAGTTTTTATC+AGG | - | chr1_3:23815753-23815772 | Msa0110750:intron | 30.0% |
TCCAATTGAAGTTTCACATA+AGG | - | chr1_3:23815806-23815825 | Msa0110750:intron | 30.0% | |
TCCTTATGTGAAACTTCAAT+TGG | + | chr1_3:23815810-23815829 | None:intergenic | 30.0% | |
AATTGAAGTTTCACATAAGG+AGG | - | chr1_3:23815809-23815828 | Msa0110750:intron | 30.0% | |
! | ATTTTATAGCAGAACTCCAA+AGG | - | chr1_3:23815862-23815881 | Msa0110750:intron | 30.0% |
CATGATATTAGAAGTTGCTA+AGG | + | chr1_3:23816392-23816411 | None:intergenic | 30.0% | |
GTCATGACAAATAAAATGCA+GGG | + | chr1_3:23816529-23816548 | None:intergenic | 30.0% | |
AGTCATGACAAATAAAATGC+AGG | + | chr1_3:23816530-23816549 | None:intergenic | 30.0% | |
! | TGATTTATACTACGCCTTTT+TGG | - | chr1_3:23816600-23816619 | Msa0110750:intron | 30.0% |
CATCAGCTATATTGCTTAAT+AGG | + | chr1_3:23816819-23816838 | None:intergenic | 30.0% | |
CTATTAAGCAATATAGCTGA+TGG | - | chr1_3:23816817-23816836 | Msa0110750:intron | 30.0% | |
AAGTCATTATCTGTATACAC+TGG | + | chr1_3:23816931-23816950 | None:intergenic | 30.0% | |
GTTGGTATTCTATTCCTTAA+AGG | - | chr1_3:23817097-23817116 | Msa0110750:CDS | 30.0% | |
! | TCCTTAAAGGTTGTCATTTA+TGG | - | chr1_3:23817110-23817129 | Msa0110750:CDS | 30.0% |
TCCATAAATGACAACCTTTA+AGG | + | chr1_3:23817114-23817133 | None:intergenic | 30.0% | |
TTAGAACCACATATCATTCT+TGG | - | chr1_3:23817185-23817204 | Msa0110750:five_prime_UTR | 30.0% | |
AGAATTCCGGAAAAGAGAAA+GGG | + | chr1_3:23801951-23801970 | None:intergenic | 35.0% | |
TGTAGTGTCAAACACATACA+CGG | - | chr1_3:23802432-23802451 | Msa0110750:intron | 35.0% | |
! | CATATGTTAGTGTTGGACAT+TGG | - | chr1_3:23802775-23802794 | Msa0110750:intron | 35.0% |
!! | ACGCTTTTGATTAGAAGTGT+CGG | - | chr1_3:23802800-23802819 | Msa0110750:intron | 35.0% |
TCAAAATTGTTGTAGCTCAC+TGG | - | chr1_3:23802851-23802870 | Msa0110750:intron | 35.0% | |
CAAAATTGTTGTAGCTCACT+GGG | - | chr1_3:23802852-23802871 | Msa0110750:intron | 35.0% | |
TTAGTGCATGCTTAGATTGA+CGG | + | chr1_3:23802896-23802915 | None:intergenic | 35.0% | |
!! | ATTGCTTTTGAAGGCTACTA+TGG | - | chr1_3:23803035-23803054 | Msa0110750:CDS | 35.0% |
!! | TTGCTTTTGAAGGCTACTAT+GGG | - | chr1_3:23803036-23803055 | Msa0110750:CDS | 35.0% |
TTTAGGCCTCCAAAAAATTG+GGG | + | chr1_3:23803157-23803176 | None:intergenic | 35.0% | |
!! | GTTTTAGGCCTCCAAAAAAT+TGG | + | chr1_3:23803159-23803178 | None:intergenic | 35.0% |
TAGACGTGTACGTAAGAAAA+TGG | + | chr1_3:23803301-23803320 | None:intergenic | 35.0% | |
CAAATACACATACGGTAAGT+TGG | + | chr1_3:23803388-23803407 | None:intergenic | 35.0% | |
TGCCATCTAACAGAAAACAA+AGG | + | chr1_3:23803449-23803468 | None:intergenic | 35.0% | |
! | TTGTTTTCTGTTAGATGGCA+TGG | - | chr1_3:23803449-23803468 | Msa0110750:CDS | 35.0% |
! | TGTTTTCTGTTAGATGGCAT+GGG | - | chr1_3:23803450-23803469 | Msa0110750:CDS | 35.0% |
! | TTTAGAATGAGGACTTCACA+TGG | + | chr1_3:23803481-23803500 | None:intergenic | 35.0% |
TTAAAGACCGGAAAGTTTCA+AGG | - | chr1_3:23803663-23803682 | Msa0110750:CDS | 35.0% | |
TAAAGACCGGAAAGTTTCAA+GGG | - | chr1_3:23803664-23803683 | Msa0110750:CDS | 35.0% | |
ATCTTTCTCACATATTGTGG+TGG | - | chr1_3:23803744-23803763 | Msa0110750:intron | 35.0% | |
AATAATAGCCATGTTCACAG+AGG | + | chr1_3:23803797-23803816 | None:intergenic | 35.0% | |
CTTGTTTCCTTTCCAAACTA+TGG | - | chr1_3:23803875-23803894 | Msa0110750:intron | 35.0% | |
!! | TTTTTGTTTGTGCAGTCTGA+AGG | - | chr1_3:23804072-23804091 | Msa0110750:intron | 35.0% |
CTAACCAAACTCTCATCAAA+TGG | + | chr1_3:23804202-23804221 | None:intergenic | 35.0% | |
CATTTGATGAGAGTTTGGTT+AGG | - | chr1_3:23804200-23804219 | Msa0110750:intron | 35.0% | |
AGTTAGCTCGAGAATTATCA+TGG | + | chr1_3:23804308-23804327 | None:intergenic | 35.0% | |
AAAATGCCAATACCACAACA+GGG | + | chr1_3:23804492-23804511 | None:intergenic | 35.0% | |
AAAAATGCCAATACCACAAC+AGG | + | chr1_3:23804493-23804512 | None:intergenic | 35.0% | |
GCATAACCATTAACCAATCA+GGG | + | chr1_3:23804577-23804596 | None:intergenic | 35.0% | |
AGCATAACCATTAACCAATC+AGG | + | chr1_3:23804578-23804597 | None:intergenic | 35.0% | |
GAGCATGCCAAAAGAAAATA+TGG | - | chr1_3:23804640-23804659 | Msa0110750:intron | 35.0% | |
! | AGCTGGACCATATTTTCTTT+TGG | + | chr1_3:23804650-23804669 | None:intergenic | 35.0% |
TTTCTTGTTGCACAAACACT+AGG | + | chr1_3:23804693-23804712 | None:intergenic | 35.0% | |
ATTCTGCTGATGTCAGATTT+GGG | - | chr1_3:23804817-23804836 | Msa0110750:intron | 35.0% | |
!!! | TGTACCTTTGGTGTTTTCTT+TGG | - | chr1_3:23804998-23805017 | Msa0110750:intron | 35.0% |
GAAACCAAAGAAAACACCAA+AGG | + | chr1_3:23805005-23805024 | None:intergenic | 35.0% | |
TCAGAATCTTAGGCAAACTT+TGG | - | chr1_3:23805023-23805042 | Msa0110750:intron | 35.0% | |
AAATGACAGGCAATAGAAGA+AGG | + | chr1_3:23805146-23805165 | None:intergenic | 35.0% | |
! | AACAAGGGGCTACTAATTTT+GGG | + | chr1_3:23805185-23805204 | None:intergenic | 35.0% |
! | TAACAAGGGGCTACTAATTT+TGG | + | chr1_3:23805186-23805205 | None:intergenic | 35.0% |
TTTGTCTTGACAGTGTATTG+TGG | - | chr1_3:23805247-23805266 | Msa0110750:intron | 35.0% | |
TGTATTGTGGAGGAAATTCA+AGG | - | chr1_3:23805260-23805279 | Msa0110750:intron | 35.0% | |
GAGATGATCTAAAAGAGAGA+GGG | + | chr1_3:23805368-23805387 | None:intergenic | 35.0% | |
AGAGATGATCTAAAAGAGAG+AGG | + | chr1_3:23805369-23805388 | None:intergenic | 35.0% | |
CCCTATGTATATGGACTTAT+TGG | - | chr1_3:23805516-23805535 | Msa0110750:CDS | 35.0% | |
CCCAATAAGTCCATATACAT+AGG | + | chr1_3:23805520-23805539 | None:intergenic | 35.0% | |
AAAAAGTCCATACCTACTAC+AGG | + | chr1_3:23805576-23805595 | None:intergenic | 35.0% | |
!! | TTAGGCTTTGTTTGGAAGAT+AGG | - | chr1_3:23805692-23805711 | Msa0110750:intron | 35.0% |
TTTGGAAGATAGGAGAGAAA+GGG | - | chr1_3:23805702-23805721 | Msa0110750:intron | 35.0% | |
!! | GGGTTTTCAAGAGTTTTGTA+GGG | + | chr1_3:23805894-23805913 | None:intergenic | 35.0% |
!! | AGGGTTTTCAAGAGTTTTGT+AGG | + | chr1_3:23805895-23805914 | None:intergenic | 35.0% |
AGTTAGGAGAAAAATGGAGA+AGG | + | chr1_3:23805942-23805961 | None:intergenic | 35.0% | |
GCTTAGAGTTAGGAGAAAAA+TGG | + | chr1_3:23805948-23805967 | None:intergenic | 35.0% | |
TATACGAGGGTCATCAAAAT+GGG | + | chr1_3:23806011-23806030 | None:intergenic | 35.0% | |
TGCCAATGTTGCAATTTGAA+AGG | - | chr1_3:23806053-23806072 | Msa0110750:intron | 35.0% | |
!!! | TGCATATCCTTTTTTAGGGT+GGG | + | chr1_3:23806107-23806126 | None:intergenic | 35.0% |
!!! | CCTCTGCATATCCTTTTTTA+GGG | + | chr1_3:23806111-23806130 | None:intergenic | 35.0% |
CCTAAAAAAGGATATGCAGA+GGG | - | chr1_3:23806109-23806128 | Msa0110750:intron | 35.0% | |
CTAAAAAAGGATATGCAGAG+GGG | - | chr1_3:23806110-23806129 | Msa0110750:intron | 35.0% | |
AATATGTCTTCATGGTCTCT+AGG | + | chr1_3:23806507-23806526 | None:intergenic | 35.0% | |
! | TCTAGATTTTTCTGTTTCGG+AGG | - | chr1_3:23806686-23806705 | Msa0110750:intron | 35.0% |
TAACTCTGTACTCTCTAACA+GGG | + | chr1_3:23806745-23806764 | None:intergenic | 35.0% | |
ATAACTCTGTACTCTCTAAC+AGG | + | chr1_3:23806746-23806765 | None:intergenic | 35.0% | |
TGACCAAAAGATCAGAAACA+GGG | + | chr1_3:23807064-23807083 | None:intergenic | 35.0% | |
TTGACCAAAAGATCAGAAAC+AGG | + | chr1_3:23807065-23807084 | None:intergenic | 35.0% | |
!! | TGTTTCTGATCTTTTGGTCA+AGG | - | chr1_3:23807064-23807083 | Msa0110750:intron | 35.0% |
!! | TCACTTTGGAACATAGGTAA+AGG | - | chr1_3:23807183-23807202 | Msa0110750:CDS | 35.0% |
GTAGATGTTCCAAGAGTTAA+AGG | + | chr1_3:23807277-23807296 | None:intergenic | 35.0% | |
CTTGGAACATCTACTCAAAT+TGG | - | chr1_3:23807283-23807302 | Msa0110750:intron | 35.0% | |
GAACATCTACTCAAATTGGT+TGG | - | chr1_3:23807287-23807306 | Msa0110750:intron | 35.0% | |
TGGAATACCTTCTTTGTTGA+AGG | - | chr1_3:23807394-23807413 | Msa0110750:CDS | 35.0% | |
AGTAAGACCTTCAACAAAGA+AGG | + | chr1_3:23807404-23807423 | None:intergenic | 35.0% | |
CCAAATGTCAATAACTAGCA+TGG | + | chr1_3:23807503-23807522 | None:intergenic | 35.0% | |
CCATGCTAGTTATTGACATT+TGG | - | chr1_3:23807500-23807519 | Msa0110750:CDS | 35.0% | |
ACCAAGTTTATCCTAGTTGT+TGG | - | chr1_3:23807739-23807758 | Msa0110750:CDS | 35.0% | |
TCCAACAACTAGGATAAACT+TGG | + | chr1_3:23807743-23807762 | None:intergenic | 35.0% | |
TTTATCCTAGTTGTTGGATG+TGG | - | chr1_3:23807745-23807764 | Msa0110750:CDS | 35.0% | |
TTATCCTAGTTGTTGGATGT+GGG | - | chr1_3:23807746-23807765 | Msa0110750:CDS | 35.0% | |
TATTCACTGTTCATCTCAAC+TGG | - | chr1_3:23807854-23807873 | Msa0110750:CDS | 35.0% | |
GTAATGCAATAAGAGGAACA+AGG | + | chr1_3:23808103-23808122 | None:intergenic | 35.0% | |
!! | TTTGGTTCTCAGGTATGTTA+GGG | - | chr1_3:23808214-23808233 | Msa0110750:intron | 35.0% |
ATGCAATCTCATAAGAAGGA+GGG | + | chr1_3:23808253-23808272 | None:intergenic | 35.0% | |
TTGGATGCAATCTCATAAGA+AGG | + | chr1_3:23808257-23808276 | None:intergenic | 35.0% | |
GAGATTGCATCCAAAATTCA+AGG | - | chr1_3:23808263-23808282 | Msa0110750:intron | 35.0% | |
!! | CATTTCCTTCTGCTTTTGTT+TGG | - | chr1_3:23808375-23808394 | Msa0110750:intron | 35.0% |
GAAGAAACACACGTAAATTC+CGG | + | chr1_3:23808442-23808461 | None:intergenic | 35.0% | |
GAAATAGAATAGCATGCATC+AGG | + | chr1_3:23808517-23808536 | None:intergenic | 35.0% | |
GTACCTATACATGACTTGAA+TGG | - | chr1_3:23808845-23808864 | Msa0110750:intron | 35.0% | |
CATCCATTCAAGTCATGTAT+AGG | + | chr1_3:23808851-23808870 | None:intergenic | 35.0% | |
CAATGTTGGAAAACTTATGC+AGG | + | chr1_3:23808907-23808926 | None:intergenic | 35.0% | |
CGGGAGAAAATTGATGAAAT+CGG | - | chr1_3:23809022-23809041 | Msa0110750:intron | 35.0% | |
AGATTGCTAAGCTACTTGAA+TGG | - | chr1_3:23809405-23809424 | Msa0110750:intron | 35.0% | |
AACATTTAATTGGTCCCACA+TGG | - | chr1_3:23809522-23809541 | Msa0110750:CDS | 35.0% | |
ACATTTAATTGGTCCCACAT+GGG | - | chr1_3:23809523-23809542 | Msa0110750:CDS | 35.0% | |
!! | AGACATTGACTTCAAAACCT+TGG | - | chr1_3:23809559-23809578 | Msa0110750:CDS | 35.0% |
GTTTACAATTGTGGTGTTTG+AGG | - | chr1_3:23809807-23809826 | Msa0110750:intron | 35.0% | |
! | ACAGGAGTATAAAAGGAACT+GGG | + | chr1_3:23809954-23809973 | None:intergenic | 35.0% |
! | AACAGGAGTATAAAAGGAAC+TGG | + | chr1_3:23809955-23809974 | None:intergenic | 35.0% |
!!! | GGGTTTTAGACAAGGAATAA+AGG | - | chr1_3:23810103-23810122 | Msa0110750:intron | 35.0% |
! | CTCTTAAAGATCAGTGGATT+AGG | + | chr1_3:23810275-23810294 | None:intergenic | 35.0% |
GATTGTCTCTTAAAGATCAG+TGG | + | chr1_3:23810281-23810300 | None:intergenic | 35.0% | |
GCTTTAACCTTTCACTTGAA+GGG | + | chr1_3:23810373-23810392 | None:intergenic | 35.0% | |
! | AGCTTTAACCTTTCACTTGA+AGG | + | chr1_3:23810374-23810393 | None:intergenic | 35.0% |
! | ACGAAGGAAGAAAAGTCTTT+TGG | - | chr1_3:23810568-23810587 | Msa0110750:CDS | 35.0% |
CTAAAACTTCTCCAAATCCA+CGG | - | chr1_3:23810631-23810650 | Msa0110750:intron | 35.0% | |
TTAGTTGTGAGTCATACCAA+TGG | + | chr1_3:23810788-23810807 | None:intergenic | 35.0% | |
AACCAGGTCAAACTTAATCT+AGG | - | chr1_3:23810911-23810930 | Msa0110750:intron | 35.0% | |
ATCCTAGATTAAGTTTGACC+TGG | + | chr1_3:23810916-23810935 | None:intergenic | 35.0% | |
TTCTTCAGTCATTTCATTCC+TGG | - | chr1_3:23811028-23811047 | Msa0110750:intron | 35.0% | |
TTACATTCCAATGCAACTTG+AGG | + | chr1_3:23811066-23811085 | None:intergenic | 35.0% | |
GATTGACGAAGTAATATCTC+TGG | - | chr1_3:23811145-23811164 | Msa0110750:intron | 35.0% | |
! | CAGTGACCTGAAAGATTTTT+GGG | + | chr1_3:23811412-23811431 | None:intergenic | 35.0% |
! | TCAGTGACCTGAAAGATTTT+TGG | + | chr1_3:23811413-23811432 | None:intergenic | 35.0% |
AGGGAGAAATATCTTATTCC+CGG | - | chr1_3:23811492-23811511 | Msa0110750:intron | 35.0% | |
!! | TTTAATTTGTTCCTCTCCAG+GGG | + | chr1_3:23811576-23811595 | None:intergenic | 35.0% |
!! | GTTTAATTTGTTCCTCTCCA+GGG | + | chr1_3:23811577-23811596 | None:intergenic | 35.0% |
!! | TGTTTAATTTGTTCCTCTCC+AGG | + | chr1_3:23811578-23811597 | None:intergenic | 35.0% |
! | GATTCTAAAGGTAGAAAGGT+AGG | - | chr1_3:23811614-23811633 | Msa0110750:CDS | 35.0% |
! | TTTGGTAATCACAAGCAATG+TGG | + | chr1_3:23811894-23811913 | None:intergenic | 35.0% |
! | TGATTTTCACCTAACCTCTT+TGG | - | chr1_3:23812002-23812021 | Msa0110750:CDS | 35.0% |
CAATCAAATCCAAAGAGGTT+AGG | + | chr1_3:23812014-23812033 | None:intergenic | 35.0% | |
GCATTAGTGGTCAAATTTCT+TGG | - | chr1_3:23812311-23812330 | Msa0110750:intron | 35.0% | |
!! | ATTCCACTGTGTTTTGAACT+GGG | - | chr1_3:23812468-23812487 | Msa0110750:CDS | 35.0% |
!! | TTCTGGGATTCTACTATTGT+AGG | + | chr1_3:23812621-23812640 | None:intergenic | 35.0% |
ATGCTTCCGTTGAATATTCT+AGG | - | chr1_3:23812725-23812744 | Msa0110750:intron | 35.0% | |
! | ATAAAGGCATAAGAAGATGC+AGG | + | chr1_3:23812846-23812865 | None:intergenic | 35.0% |
TGCCTTTATCATGTAACCAA+TGG | - | chr1_3:23812857-23812876 | Msa0110750:intron | 35.0% | |
! | GACCATTGGTTACATGATAA+AGG | + | chr1_3:23812862-23812881 | None:intergenic | 35.0% |
GACAAAAGTTTAAATCCCCT+AGG | - | chr1_3:23812926-23812945 | Msa0110750:intron | 35.0% | |
! | ATTTTACAACCATACCCTAG+GGG | + | chr1_3:23812944-23812963 | None:intergenic | 35.0% |
! | CATTTTACAACCATACCCTA+GGG | + | chr1_3:23812945-23812964 | None:intergenic | 35.0% |
! | TCATTTTACAACCATACCCT+AGG | + | chr1_3:23812946-23812965 | None:intergenic | 35.0% |
!! | AGTAGTGCTGAATTTGGTTT+TGG | - | chr1_3:23813000-23813019 | Msa0110750:intron | 35.0% |
CAAACTATTGATCCTTTGTG+TGG | + | chr1_3:23813063-23813082 | None:intergenic | 35.0% | |
! | CAAAGGATCAATAGTTTGCA+TGG | - | chr1_3:23813065-23813084 | Msa0110750:intron | 35.0% |
CATCTCTCTATATCATCAGA+TGG | + | chr1_3:23813114-23813133 | None:intergenic | 35.0% | |
! | CTAAGTGTTTTCTTCCATGA+GGG | - | chr1_3:23813238-23813257 | Msa0110750:intron | 35.0% |
! | ATCTTGCGATTTTTATCGGA+TGG | + | chr1_3:23813475-23813494 | None:intergenic | 35.0% |
AATCGCAAGATGAAGATAGT+TGG | - | chr1_3:23813484-23813503 | Msa0110750:CDS | 35.0% | |
TCTGCTATGTTGAACCAATA+TGG | + | chr1_3:23813517-23813536 | None:intergenic | 35.0% | |
!! | TATTGGTTCAACATAGCAGA+AGG | - | chr1_3:23813517-23813536 | Msa0110750:intron | 35.0% |
TTTCTATTGACAGGACCAAA+TGG | - | chr1_3:23813577-23813596 | Msa0110750:intron | 35.0% | |
AGAGTCAAAATAGGGAATCA+CGG | + | chr1_3:23813686-23813705 | None:intergenic | 35.0% | |
!! | GGCTTTATTTGGTCGATATA+TGG | + | chr1_3:23813901-23813920 | None:intergenic | 35.0% |
CTAGCTTCTTACAAATATGG+TGG | + | chr1_3:23814143-23814162 | None:intergenic | 35.0% | |
TAGTGTCTAATAGAGCTACT+TGG | - | chr1_3:23814186-23814205 | Msa0110750:intron | 35.0% | |
! | TGTGAAGTAGTGCTATTAGA+TGG | + | chr1_3:23814232-23814251 | None:intergenic | 35.0% |
GGAAGATCACACAATTAAGA+GGG | - | chr1_3:23814519-23814538 | Msa0110750:intron | 35.0% | |
ACCTAAGGACATAGAATAGT+GGG | + | chr1_3:23814561-23814580 | None:intergenic | 35.0% | |
AACCTAAGGACATAGAATAG+TGG | + | chr1_3:23814562-23814581 | None:intergenic | 35.0% | |
GAACAAGCTTGATAAACCTA+AGG | + | chr1_3:23814576-23814595 | None:intergenic | 35.0% | |
! | TTTATCAAGCTTGTTCTCGT+AGG | - | chr1_3:23814580-23814599 | Msa0110750:CDS | 35.0% |
!! | CATGTGTTTATAAGTGTTGG+AGG | - | chr1_3:23814683-23814702 | Msa0110750:intron | 35.0% |
CTAACTCAACCTTACAAAAC+CGG | + | chr1_3:23814727-23814746 | None:intergenic | 35.0% | |
ATATGGTGATATTAGAAGGG+AGG | + | chr1_3:23815004-23815023 | None:intergenic | 35.0% | |
! | TATTAAAGTATTCACGGGGA+AGG | - | chr1_3:23815084-23815103 | Msa0110750:CDS | 35.0% |
! | ATTAAAGTATTCACGGGGAA+GGG | - | chr1_3:23815085-23815104 | Msa0110750:CDS | 35.0% |
CAGACAACATATAGTATTCG+GGG | + | chr1_3:23815211-23815230 | None:intergenic | 35.0% | |
AACACTGTACACAAAGCAAT+GGG | - | chr1_3:23815495-23815514 | Msa0110750:intron | 35.0% | |
ATGGACAAACAAAACCTACT+TGG | - | chr1_3:23815532-23815551 | Msa0110750:intron | 35.0% | |
GATATAGATCTTCAGCTCTT+TGG | + | chr1_3:23815635-23815654 | None:intergenic | 35.0% | |
TGCAGAAAACTATGCAAAAC+AGG | - | chr1_3:23815683-23815702 | Msa0110750:intron | 35.0% | |
TTTATCAGGAATTTCTCACG+AGG | - | chr1_3:23815767-23815786 | Msa0110750:intron | 35.0% | |
GGAGTTCTGCTATAAAATCT+TGG | + | chr1_3:23815860-23815879 | None:intergenic | 35.0% | |
AGTGTTTCTTAATTGGCACT+AGG | - | chr1_3:23815916-23815935 | Msa0110750:intron | 35.0% | |
GTGTTTCTTAATTGGCACTA+GGG | - | chr1_3:23815917-23815936 | Msa0110750:intron | 35.0% | |
CCTACATAGAGTTTCTTATC+TGG | + | chr1_3:23815996-23816015 | None:intergenic | 35.0% | |
CCAGATAAGAAACTCTATGT+AGG | - | chr1_3:23815993-23816012 | Msa0110750:intron | 35.0% | |
TAAGAAACTCTATGTAGGAG+AGG | - | chr1_3:23815998-23816017 | Msa0110750:intron | 35.0% | |
ACTTCACTTGCCTATGTTAA+AGG | - | chr1_3:23816079-23816098 | Msa0110750:intron | 35.0% | |
CTTCACTTGCCTATGTTAAA+GGG | - | chr1_3:23816080-23816099 | Msa0110750:intron | 35.0% | |
!! | AATCCTAATACCTCTAGAAC+AGG | - | chr1_3:23816197-23816216 | Msa0110750:intron | 35.0% |
AGTTTAATTGCCTGTTCTAG+AGG | + | chr1_3:23816210-23816229 | None:intergenic | 35.0% | |
! | TCTAGAACAGGCAATTAAAC+TGG | - | chr1_3:23816209-23816228 | Msa0110750:intron | 35.0% |
! | AATTGGTTCAGTACCTTGTT+GGG | - | chr1_3:23816242-23816261 | Msa0110750:intron | 35.0% |
ATCTCACTTGACAAGTCATT+TGG | - | chr1_3:23816425-23816444 | Msa0110750:intron | 35.0% | |
TGACAAATAAAATGCAGGGA+AGG | + | chr1_3:23816525-23816544 | None:intergenic | 35.0% | |
! | TGATTGATTTCATGCTGTGA+TGG | - | chr1_3:23816636-23816655 | Msa0110750:intron | 35.0% |
TGATTAGCAGCGTTTCTATT+TGG | + | chr1_3:23816774-23816793 | None:intergenic | 35.0% | |
ATATAGCTGATGGTAAGCAT+CGG | - | chr1_3:23816827-23816846 | Msa0110750:intron | 35.0% | |
!!! | CTGTTTTAGTATGTTGGATG+GGG | + | chr1_3:23817143-23817162 | None:intergenic | 35.0% |
!!! | CCTGTTTTAGTATGTTGGAT+GGG | + | chr1_3:23817144-23817163 | None:intergenic | 35.0% |
!!! | ACCTGTTTTAGTATGTTGGA+TGG | + | chr1_3:23817145-23817164 | None:intergenic | 35.0% |
! | TTTGTGCTGTTGTTGTCTCT+TGG | + | chr1_3:23801761-23801780 | None:intergenic | 40.0% |
TGAGGTGAAGAATGAATGTG+TGG | + | chr1_3:23801856-23801875 | None:intergenic | 40.0% | |
! | TTCGTTCCCTTTCTCTTTTC+CGG | - | chr1_3:23801942-23801961 | Msa0110750:three_prime_UTR | 40.0% |
GAGAATTCCGGAAAAGAGAA+AGG | + | chr1_3:23801952-23801971 | None:intergenic | 40.0% | |
CTCTCTCTATCTCTTCTTTG+TGG | - | chr1_3:23802067-23802086 | Msa0110750:three_prime_UTR | 40.0% | |
ATTCAACTGCGCTGAATGTA+GGG | - | chr1_3:23802133-23802152 | Msa0110750:exon | 40.0% | |
GTAGTGTCAAACACATACAC+GGG | - | chr1_3:23802433-23802452 | Msa0110750:intron | 40.0% | |
CCACAAACACTTCTGATTGA+AGG | + | chr1_3:23802474-23802493 | None:intergenic | 40.0% | |
!! | CCTTCAATCAGAAGTGTTTG+TGG | - | chr1_3:23802471-23802490 | Msa0110750:intron | 40.0% |
TTCGTTTGTGTACTGTGTAG+AGG | - | chr1_3:23802606-23802625 | Msa0110750:intron | 40.0% | |
!! | ATTAGAAGTGTCGGTGCTAT+AGG | - | chr1_3:23802809-23802828 | Msa0110750:intron | 40.0% |
! | AAACTGTTGGAGAGACCTTT+TGG | - | chr1_3:23802963-23802982 | Msa0110750:intron | 40.0% |
!! | TGCTTTTGAAGGCTACTATG+GGG | - | chr1_3:23803037-23803056 | Msa0110750:CDS | 40.0% |
! | TAGCTACGAACCACGATTTT+AGG | - | chr1_3:23803098-23803117 | Msa0110750:CDS | 40.0% |
! | AGCTACGAACCACGATTTTA+GGG | - | chr1_3:23803099-23803118 | Msa0110750:CDS | 40.0% |
GATTCAAACCCCTAAAATCG+TGG | + | chr1_3:23803111-23803130 | None:intergenic | 40.0% | |
CATGACTTTGAGCTCATTCT+AGG | - | chr1_3:23803233-23803252 | Msa0110750:CDS | 40.0% | |
CGTGTACGTAAGAAAATGGT+TGG | + | chr1_3:23803297-23803316 | None:intergenic | 40.0% | |
AAAGACCGGAAAGTTTCAAG+GGG | - | chr1_3:23803665-23803684 | Msa0110750:CDS | 40.0% | |
ATCTGATACTCTGAGCTTCT+TGG | + | chr1_3:23803705-23803724 | None:intergenic | 40.0% | |
! | TTCTCACATATTGTGGTGGA+AGG | - | chr1_3:23803748-23803767 | Msa0110750:intron | 40.0% |
TTTCCTTTCCAAACTATGGC+AGG | - | chr1_3:23803879-23803898 | Msa0110750:intron | 40.0% | |
! | ACGTCAAGTTTTACTCTGCA+GGG | - | chr1_3:23804141-23804160 | Msa0110750:intron | 40.0% |
CACACCATTTGATGAGAGTT+TGG | - | chr1_3:23804195-23804214 | Msa0110750:intron | 40.0% | |
ATGAGAGTTTGGTTAGGCAT+TGG | - | chr1_3:23804206-23804225 | Msa0110750:intron | 40.0% | |
GAGACTTCTATGAAGCTCTT+GGG | - | chr1_3:23804383-23804402 | Msa0110750:intron | 40.0% | |
TATGCGGGTTTAAATCCCTT+TGG | - | chr1_3:23804430-23804449 | Msa0110750:intron | 40.0% | |
! | TTAGTGCCCTGATTGGTTAA+TGG | - | chr1_3:23804568-23804587 | Msa0110750:intron | 40.0% |
CATTCTGCTGATGTCAGATT+TGG | - | chr1_3:23804816-23804835 | Msa0110750:intron | 40.0% | |
TTCTGCTGATGTCAGATTTG+GGG | - | chr1_3:23804818-23804837 | Msa0110750:intron | 40.0% | |
! | TGTTTCGTTTTGTGCACCAA+AGG | - | chr1_3:23804908-23804927 | Msa0110750:intron | 40.0% |
ACGGCAAACATCATAACAAG+GGG | + | chr1_3:23805199-23805218 | None:intergenic | 40.0% | |
CACGGCAAACATCATAACAA+GGG | + | chr1_3:23805200-23805219 | None:intergenic | 40.0% | |
ACACGGCAAACATCATAACA+AGG | + | chr1_3:23805201-23805220 | None:intergenic | 40.0% | |
GCAACATGTATTCGTGAACA+CGG | + | chr1_3:23805218-23805237 | None:intergenic | 40.0% | |
ATGATCTAAAAGAGAGAGGG+AGG | + | chr1_3:23805365-23805384 | None:intergenic | 40.0% | |
TGGTCACGTCATTTCTCTTT+AGG | - | chr1_3:23805674-23805693 | Msa0110750:intron | 40.0% | |
GTTTGGAAGATAGGAGAGAA+AGG | - | chr1_3:23805701-23805720 | Msa0110750:intron | 40.0% | |
ATACGAGGGTCATCAAAATG+GGG | + | chr1_3:23806010-23806029 | None:intergenic | 40.0% | |
CTATACGAGGGTCATCAAAA+TGG | + | chr1_3:23806012-23806031 | None:intergenic | 40.0% | |
ATTGCAACATTGGCATGTCA+TGG | + | chr1_3:23806048-23806067 | None:intergenic | 40.0% | |
!!! | CTGCATATCCTTTTTTAGGG+TGG | + | chr1_3:23806108-23806127 | None:intergenic | 40.0% |
CCCTAAAAAAGGATATGCAG+AGG | - | chr1_3:23806108-23806127 | Msa0110750:intron | 40.0% | |
!!! | CCCTCTGCATATCCTTTTTT+AGG | + | chr1_3:23806112-23806131 | None:intergenic | 40.0% |
! | TACAACACATTTTTCCGCAC+TGG | - | chr1_3:23806189-23806208 | Msa0110750:intron | 40.0% |
ATAACAGAACAAGACCAGTG+CGG | + | chr1_3:23806206-23806225 | None:intergenic | 40.0% | |
TAGGAATTTCTCATTCGGCA+AGG | - | chr1_3:23806461-23806480 | Msa0110750:intron | 40.0% | |
AGGAATTTCTCATTCGGCAA+GGG | - | chr1_3:23806462-23806481 | Msa0110750:intron | 40.0% | |
! | TTCTGCATACATCTTTGAGG+AGG | - | chr1_3:23806596-23806615 | Msa0110750:intron | 40.0% |
! | TCTTTGAGGAGGAATTCTTG+TGG | - | chr1_3:23806607-23806626 | Msa0110750:intron | 40.0% |
TCTCTGAATGCTTGATTTCC+TGG | - | chr1_3:23806860-23806879 | Msa0110750:intron | 40.0% | |
CTCTGAATGCTTGATTTCCT+GGG | - | chr1_3:23806861-23806880 | Msa0110750:intron | 40.0% | |
TATTTCAGGAACGTCCAAGT+GGG | - | chr1_3:23806968-23806987 | Msa0110750:intron | 40.0% | |
GTAGTTCCAGACATTCTGAA+TGG | - | chr1_3:23807027-23807046 | Msa0110750:intron | 40.0% | |
ATCGAACCATTCAGAATGTC+TGG | + | chr1_3:23807036-23807055 | None:intergenic | 40.0% | |
AGACATTCTGAATGGTTCGA+TGG | - | chr1_3:23807035-23807054 | Msa0110750:intron | 40.0% | |
GTCAAGGTGTGATTCTAAAC+AGG | - | chr1_3:23807080-23807099 | Msa0110750:intron | 40.0% | |
ACATAGGTAAAGGAGCTCTA+TGG | - | chr1_3:23807193-23807212 | Msa0110750:CDS | 40.0% | |
TCGTAACGTAACTGTGTCTT+CGG | - | chr1_3:23807237-23807256 | Msa0110750:intron | 40.0% | |
TAACTGTGTCTTCGGGAAAT+AGG | - | chr1_3:23807245-23807264 | Msa0110750:intron | 40.0% | |
AACTGTGTCTTCGGGAAATA+GGG | - | chr1_3:23807246-23807265 | Msa0110750:intron | 40.0% | |
!! | AAAGAAGGTATTCCATCCGT+CGG | + | chr1_3:23807389-23807408 | None:intergenic | 40.0% |
! | ATTGGTAATCCACTGCAATG+TGG | + | chr1_3:23807431-23807450 | None:intergenic | 40.0% |
!! | CTTGGTTCTGCCAGAATTAA+GGG | + | chr1_3:23807725-23807744 | None:intergenic | 40.0% |
!! | ACTTGGTTCTGCCAGAATTA+AGG | + | chr1_3:23807726-23807745 | None:intergenic | 40.0% |
!! | GTCTGTTTACTTTGGTTCTC+AGG | - | chr1_3:23808204-23808223 | Msa0110750:intron | 40.0% |
!! | CTTTGGTTCTCAGGTATGTT+AGG | - | chr1_3:23808213-23808232 | Msa0110750:intron | 40.0% |
GATGCAATCTCATAAGAAGG+AGG | + | chr1_3:23808254-23808273 | None:intergenic | 40.0% | |
CAGTGTAACATGCTCAATTC+CGG | - | chr1_3:23808420-23808439 | Msa0110750:intron | 40.0% | |
TACGTGTGTTTCTTCAGCAA+AGG | - | chr1_3:23808447-23808466 | Msa0110750:intron | 40.0% | |
GCACATTTGTCCATTCATGA+AGG | - | chr1_3:23808801-23808820 | Msa0110750:intron | 40.0% | |
ACTTGAATGGATGTCCAACA+GGG | - | chr1_3:23808858-23808877 | Msa0110750:intron | 40.0% | |
TGGTGCAGTGAAATCTATGT+AGG | + | chr1_3:23808884-23808903 | None:intergenic | 40.0% | |
TGTTGGAAAACTTATGCAGG+TGG | + | chr1_3:23808904-23808923 | None:intergenic | 40.0% | |
!! | GAAAAGGTATTTCAGCTAGC+CGG | - | chr1_3:23808984-23809003 | Msa0110750:intron | 40.0% |
TGCTAAGCTACTTGAATGGA+AGG | - | chr1_3:23809409-23809428 | Msa0110750:intron | 40.0% | |
TAAGCTACTTGAATGGAAGG+AGG | - | chr1_3:23809412-23809431 | Msa0110750:intron | 40.0% | |
TCGACAAATGCACATCTAAG+AGG | + | chr1_3:23809652-23809671 | None:intergenic | 40.0% | |
! | GATAAGGGGATTTTGGATAC+TGG | + | chr1_3:23809709-23809728 | None:intergenic | 40.0% |
! | ACAATTGTGGTGTTTGAGGT+AGG | - | chr1_3:23809811-23809830 | Msa0110750:intron | 40.0% |
ATCCTAAGACAGCAGATGTT+TGG | - | chr1_3:23809880-23809899 | Msa0110750:intron | 40.0% | |
TTCCAAACATCTGCTGTCTT+AGG | + | chr1_3:23809885-23809904 | None:intergenic | 40.0% | |
TATAAAAGGAACTGGGCAAG+AGG | + | chr1_3:23809947-23809966 | None:intergenic | 40.0% | |
AACAATGCCCTTCAAGTGAA+AGG | - | chr1_3:23810363-23810382 | Msa0110750:intron | 40.0% | |
ATTCTTGTTCTCCGTGGATT+TGG | + | chr1_3:23810645-23810664 | None:intergenic | 40.0% | |
CTTTGAATTCTTGTTCTCCG+TGG | + | chr1_3:23810651-23810670 | None:intergenic | 40.0% | |
GAGATAGTAGAAGTCACCAT+TGG | - | chr1_3:23810769-23810788 | Msa0110750:CDS | 40.0% | |
! | AACTTAATCTAGGATTGCCC+TGG | - | chr1_3:23810921-23810940 | Msa0110750:intron | 40.0% |
TGTGATAGTATGTTTGGCCA+GGG | + | chr1_3:23810941-23810960 | None:intergenic | 40.0% | |
TTGTGATAGTATGTTTGGCC+AGG | + | chr1_3:23810942-23810961 | None:intergenic | 40.0% | |
TTGAGGCAGATAGATTAACC+AGG | + | chr1_3:23811049-23811068 | None:intergenic | 40.0% | |
GACGAAGTAATATCTCTGGA+TGG | - | chr1_3:23811149-23811168 | Msa0110750:intron | 40.0% | |
TTCATCAGGAATAGCAGAGA+AGG | + | chr1_3:23811198-23811217 | None:intergenic | 40.0% | |
TTGACGATATGGAGTCTGTA+TGG | - | chr1_3:23811222-23811241 | Msa0110750:intron | 40.0% | |
GATATGGAGTCTGTATGGAA+AGG | - | chr1_3:23811227-23811246 | Msa0110750:intron | 40.0% | |
AAATGATGTGCTTACTTCCG+TGG | - | chr1_3:23811271-23811290 | Msa0110750:intron | 40.0% | |
GAGGACTTGAATTTAGCAGT+AGG | - | chr1_3:23811305-23811324 | Msa0110750:intron | 40.0% | |
CTTGCAAATAGCTATAGGCA+AGG | + | chr1_3:23811346-23811365 | None:intergenic | 40.0% | |
TCTCAACTTAGAGCTCCTAA+GGG | - | chr1_3:23811473-23811492 | Msa0110750:intron | 40.0% | |
GGGAGAAATATCTTATTCCC+GGG | - | chr1_3:23811493-23811512 | Msa0110750:intron | 40.0% | |
AATATCTTATTCCCGGGAAC+AGG | - | chr1_3:23811499-23811518 | Msa0110750:intron | 40.0% | |
TAAAGGTAGAAAGGTAGGTG+AGG | - | chr1_3:23811619-23811638 | Msa0110750:CDS | 40.0% | |
CAAAACACACCTTGATAAGG+CGG | + | chr1_3:23811672-23811691 | None:intergenic | 40.0% | |
GTACCATGAAGCAAATGTCA+AGG | - | chr1_3:23811790-23811809 | Msa0110750:CDS | 40.0% | |
TTGCCTTGACATTTGCTTCA+TGG | + | chr1_3:23811796-23811815 | None:intergenic | 40.0% | |
! | CAAGGCAAACACTAGAGTTT+TGG | - | chr1_3:23811808-23811827 | Msa0110750:intron | 40.0% |
CACATGAGCATATAACGCTT+TGG | + | chr1_3:23811912-23811931 | None:intergenic | 40.0% | |
AAGCGTTATATGCTCATGTG+AGG | - | chr1_3:23811912-23811931 | Msa0110750:intron | 40.0% | |
TGGAGTGTGTATTGCATTAG+TGG | - | chr1_3:23812298-23812317 | Msa0110750:intron | 40.0% | |
!! | CATTCCACTGTGTTTTGAAC+TGG | - | chr1_3:23812467-23812486 | Msa0110750:CDS | 40.0% |
!! | TTCCACTGTGTTTTGAACTG+GGG | - | chr1_3:23812469-23812488 | Msa0110750:CDS | 40.0% |
TCATTGATGTCTTGCAGTGA+AGG | - | chr1_3:23812573-23812592 | Msa0110750:intron | 40.0% | |
CATTGATGTCTTGCAGTGAA+GGG | - | chr1_3:23812574-23812593 | Msa0110750:intron | 40.0% | |
TGAAGGGAGAAGAAGGAAAT+GGG | - | chr1_3:23812590-23812609 | Msa0110750:intron | 40.0% | |
AGTAGAATCCCAGAAGTTTG+AGG | - | chr1_3:23812626-23812645 | Msa0110750:intron | 40.0% | |
GGGAAATTGAATCACGACAT+AGG | - | chr1_3:23812676-23812695 | Msa0110750:intron | 40.0% | |
CGTACATCGCAGGAATAAAA+CGG | + | chr1_3:23812792-23812811 | None:intergenic | 40.0% | |
TATATCTTGTCGTACATCGC+AGG | + | chr1_3:23812802-23812821 | None:intergenic | 40.0% | |
ACTACTTCAACTGTGACCAT+TGG | + | chr1_3:23812876-23812895 | None:intergenic | 40.0% | |
AGTTTAAATCCCCTAGGGTA+TGG | - | chr1_3:23812932-23812951 | Msa0110750:intron | 40.0% | |
! | TCTGTCAGTAGTGCTGAATT+TGG | - | chr1_3:23812994-23813013 | Msa0110750:intron | 40.0% |
CTGTGAAGTATGAAGCACAT+TGG | + | chr1_3:23813137-23813156 | None:intergenic | 40.0% | |
TGCTTCATACTTCACAGCAA+TGG | - | chr1_3:23813140-23813159 | Msa0110750:intron | 40.0% | |
! | GCTAAGTGTTTTCTTCCATG+AGG | - | chr1_3:23813237-23813256 | Msa0110750:intron | 40.0% |
CTTTGTCAAACTGTTGTTGC+AGG | - | chr1_3:23813441-23813460 | Msa0110750:CDS | 40.0% | |
TCAAACTGTTGTTGCAGGAT+GGG | - | chr1_3:23813446-23813465 | Msa0110750:CDS | 40.0% | |
CTTGATTTACCACCACCATT+TGG | + | chr1_3:23813595-23813614 | None:intergenic | 40.0% | |
ACTTGGGATATGTGGACTTA+TGG | - | chr1_3:23813645-23813664 | Msa0110750:intron | 40.0% | |
AGCTCTATTAGACACTAAGC+TGG | + | chr1_3:23814183-23814202 | None:intergenic | 40.0% | |
! | CAGTACGAAGTATCTACCAT+CGG | + | chr1_3:23814466-23814485 | None:intergenic | 40.0% |
CGTACTGAACATTGTTCACA+AGG | - | chr1_3:23814479-23814498 | Msa0110750:intron | 40.0% | |
ACTGAACATTGTTCACAAGG+AGG | - | chr1_3:23814482-23814501 | Msa0110750:intron | 40.0% | |
GGGAAGATCACACAATTAAG+AGG | - | chr1_3:23814518-23814537 | Msa0110750:intron | 40.0% | |
TCCCACTATTCTATGTCCTT+AGG | - | chr1_3:23814557-23814576 | Msa0110750:CDS | 40.0% | |
GTCCTTAAAAGTCCCACATT+GGG | - | chr1_3:23814644-23814663 | Msa0110750:intron | 40.0% | |
!! | CGGTTTTGTAAGGTTGAGTT+AGG | - | chr1_3:23814725-23814744 | Msa0110750:intron | 40.0% |
ATCACCATATCAGAAACAGC+AGG | - | chr1_3:23815014-23815033 | Msa0110750:intron | 40.0% | |
TCACCATATCAGAAACAGCA+GGG | - | chr1_3:23815015-23815034 | Msa0110750:intron | 40.0% | |
!! | TATCCCTGCTGTTTCTGATA+TGG | + | chr1_3:23815021-23815040 | None:intergenic | 40.0% |
TGTACAGCAGACTATAACAG+AGG | + | chr1_3:23815055-23815074 | None:intergenic | 40.0% | |
!! | AGCAATGATGGATCGAAGTT+CGG | + | chr1_3:23815304-23815323 | None:intergenic | 40.0% |
! | CTTGTTGATGAAATATGCCG+AGG | - | chr1_3:23815348-23815367 | Msa0110750:CDS | 40.0% |
TCTTGATAGAAGTGGCTGTT+TGG | - | chr1_3:23815419-23815438 | Msa0110750:intron | 40.0% | |
CTTGATAGAAGTGGCTGTTT+GGG | - | chr1_3:23815420-23815439 | Msa0110750:intron | 40.0% | |
TTGATAGAAGTGGCTGTTTG+GGG | - | chr1_3:23815421-23815440 | Msa0110750:intron | 40.0% | |
ACAGTGTTCTTGATGTTCAG+TGG | + | chr1_3:23815483-23815502 | None:intergenic | 40.0% | |
GAACACTGTACACAAAGCAA+TGG | - | chr1_3:23815494-23815513 | Msa0110750:intron | 40.0% | |
!!! | TTGCTTTTGAAACTGCCAAG+AGG | - | chr1_3:23815586-23815605 | Msa0110750:intron | 40.0% |
!!! | TGCTTTTGAAACTGCCAAGA+GGG | - | chr1_3:23815587-23815606 | Msa0110750:intron | 40.0% |
GCTCTTTGGATAACAATCTC+AGG | + | chr1_3:23815621-23815640 | None:intergenic | 40.0% | |
! | CTGATGCGATCTTTTTCCTT+TGG | + | chr1_3:23815881-23815900 | None:intergenic | 40.0% |
TCTTAATTGGCACTAGGGAA+TGG | - | chr1_3:23815922-23815941 | Msa0110750:intron | 40.0% | |
TTGAAGAGCCTATAGTCATC+GGG | + | chr1_3:23815953-23815972 | None:intergenic | 40.0% | |
CTTGAAGAGCCTATAGTCAT+CGG | + | chr1_3:23815954-23815973 | None:intergenic | 40.0% | |
CAACAACCACCCTTTAACAT+AGG | + | chr1_3:23816092-23816111 | None:intergenic | 40.0% | |
CTATGTTAAAGGGTGGTTGT+TGG | - | chr1_3:23816090-23816109 | Msa0110750:intron | 40.0% | |
!! | TTGCCTGTTCTAGAGGTATT+AGG | + | chr1_3:23816203-23816222 | None:intergenic | 40.0% |
GAACAGGCAATTAAACTGGT+AGG | - | chr1_3:23816213-23816232 | Msa0110750:intron | 40.0% | |
AAACTGGTAGGTACCAGAAT+TGG | - | chr1_3:23816225-23816244 | Msa0110750:intron | 40.0% | |
!! | ACAAGGTACTGAACCAATTC+TGG | + | chr1_3:23816241-23816260 | None:intergenic | 40.0% |
! | GAATTGGTTCAGTACCTTGT+TGG | - | chr1_3:23816241-23816260 | Msa0110750:intron | 40.0% |
TGTTATTAGGTGTCCCAACA+AGG | + | chr1_3:23816258-23816277 | None:intergenic | 40.0% | |
GTGCACATCGATCAAAAGAA+GGG | - | chr1_3:23816695-23816714 | Msa0110750:intron | 40.0% | |
TTCCTCTATTTCCTAGTTCC+AGG | - | chr1_3:23816733-23816752 | Msa0110750:intron | 40.0% | |
TTCCTGGAACTAGGAAATAG+AGG | + | chr1_3:23816738-23816757 | None:intergenic | 40.0% | |
CTTAATAGGAAGCCTCGATT+CGG | + | chr1_3:23816805-23816824 | None:intergenic | 40.0% | |
!! | GATGGTAAGCATCGGAATTT+CGG | - | chr1_3:23816835-23816854 | Msa0110750:intron | 40.0% |
ATGTAGTTACGCGTAAACGT+TGG | + | chr1_3:23816866-23816885 | None:intergenic | 40.0% | |
AGCTGCGATTATGTTCACAT+CGG | - | chr1_3:23817026-23817045 | Msa0110750:CDS | 40.0% | |
! | TTTTAGTATGTTGGATGGGG+AGG | + | chr1_3:23817140-23817159 | None:intergenic | 40.0% |
CCCATCCAACATACTAAAAC+AGG | - | chr1_3:23817141-23817160 | Msa0110750:five_prime_UTR | 40.0% | |
ACAACAGCACAAACCACACT+CGG | - | chr1_3:23801768-23801787 | Msa0110750:three_prime_UTR | 45.0% | |
ACCTTAAGAACAGACACCGA+GGG | + | chr1_3:23801815-23801834 | None:intergenic | 45.0% | |
AACCTTAAGAACAGACACCG+AGG | + | chr1_3:23801816-23801835 | None:intergenic | 45.0% | |
AAGGAGGAGAAGGAGAATTC+CGG | + | chr1_3:23801964-23801983 | None:intergenic | 45.0% | |
ATGAAGGAAGAAGGAGGAGA+AGG | + | chr1_3:23801974-23801993 | None:intergenic | 45.0% | |
GTATACCTGAGGAAACGAGA+GGG | + | chr1_3:23801998-23802017 | None:intergenic | 45.0% | |
AGTATACCTGAGGAAACGAG+AGG | + | chr1_3:23801999-23802018 | None:intergenic | 45.0% | |
! | AGAGAGAGAGAGTATACCTG+AGG | + | chr1_3:23802009-23802028 | None:intergenic | 45.0% |
CATTCAACTGCGCTGAATGT+AGG | - | chr1_3:23802132-23802151 | Msa0110750:exon | 45.0% | |
TACCGGTGTTTGTGTCATGT+CGG | + | chr1_3:23802720-23802739 | None:intergenic | 45.0% | |
GCTTAGATTGACGGTGAGTT+TGG | + | chr1_3:23802887-23802906 | None:intergenic | 45.0% | |
!!! | TGGAGAGACCTTTTGGCTTT+AGG | - | chr1_3:23802970-23802989 | Msa0110750:intron | 45.0% |
!!! | ACCTTTTGGCTTTAGGTGAG+AGG | - | chr1_3:23802977-23802996 | Msa0110750:intron | 45.0% |
TCCTCTCACCTAAAGCCAAA+AGG | + | chr1_3:23802981-23803000 | None:intergenic | 45.0% | |
! | GCTACGAACCACGATTTTAG+GGG | - | chr1_3:23803100-23803119 | Msa0110750:CDS | 45.0% |
! | TCCAAAAAATTGGGGTTGGC+CGG | + | chr1_3:23803149-23803168 | None:intergenic | 45.0% |
! | GCAACACAAGCAAGGGTTTT+AGG | + | chr1_3:23803174-23803193 | None:intergenic | 45.0% |
GGTACAAGCAACACAAGCAA+GGG | + | chr1_3:23803181-23803200 | None:intergenic | 45.0% | |
AGGTACAAGCAACACAAGCA+AGG | + | chr1_3:23803182-23803201 | None:intergenic | 45.0% | |
!! | TGCTTGTGTTGCTTGTACCT+TGG | - | chr1_3:23803182-23803201 | Msa0110750:CDS | 45.0% |
!! | GCTTGTGTTGCTTGTACCTT+GGG | - | chr1_3:23803183-23803202 | Msa0110750:CDS | 45.0% |
ACATGCATAACTCTTGCCCA+AGG | + | chr1_3:23803202-23803221 | None:intergenic | 45.0% | |
AAGACCGGAAAGTTTCAAGG+GGG | - | chr1_3:23803666-23803685 | Msa0110750:CDS | 45.0% | |
! | TCACATATTGTGGTGGAAGG+AGG | - | chr1_3:23803751-23803770 | Msa0110750:intron | 45.0% |
ACTCCTGCCATAGTTTGGAA+AGG | + | chr1_3:23803885-23803904 | None:intergenic | 45.0% | |
CTGCAGAGTAAAACTTGACG+TGG | + | chr1_3:23804142-23804161 | None:intergenic | 45.0% | |
! | CACGTCAAGTTTTACTCTGC+AGG | - | chr1_3:23804140-23804159 | Msa0110750:intron | 45.0% |
GGAGACTTCTATGAAGCTCT+TGG | - | chr1_3:23804382-23804401 | Msa0110750:intron | 45.0% | |
TCTGATCGTAGACCACCAAA+GGG | + | chr1_3:23804448-23804467 | None:intergenic | 45.0% | |
ATCTGATCGTAGACCACCAA+AGG | + | chr1_3:23804449-23804468 | None:intergenic | 45.0% | |
TTGGATGATCTGACACGCAA+TGG | - | chr1_3:23805042-23805061 | Msa0110750:intron | 45.0% | |
GACACGCAATGGTTATTCAG+TGG | - | chr1_3:23805053-23805072 | Msa0110750:intron | 45.0% | |
GTCTTGACAGTGTATTGTGG+AGG | - | chr1_3:23805250-23805269 | Msa0110750:intron | 45.0% | |
CAGTATTCTCCAATTGGCAG+CGG | - | chr1_3:23805332-23805351 | Msa0110750:CDS | 45.0% | |
CCATATACATAGGGGTTTCC+TGG | + | chr1_3:23805510-23805529 | None:intergenic | 45.0% | |
CCAGGAAACCCCTATGTATA+TGG | - | chr1_3:23805507-23805526 | Msa0110750:CDS | 45.0% | |
ACCTATGCCTGTAGTAGGTA+TGG | - | chr1_3:23805566-23805585 | Msa0110750:intron | 45.0% | |
TCCATACCTACTACAGGCAT+AGG | + | chr1_3:23805570-23805589 | None:intergenic | 45.0% | |
GAAGATAGGAGAGAAAGGGA+GGG | - | chr1_3:23805706-23805725 | Msa0110750:intron | 45.0% | |
AGAAAAAGGGGATGGAGGAA+GGG | + | chr1_3:23805914-23805933 | None:intergenic | 45.0% | |
GAGAAGGCTTGGAGAAAAAG+GGG | + | chr1_3:23805926-23805945 | None:intergenic | 45.0% | |
GGAGAAGGCTTGGAGAAAAA+GGG | + | chr1_3:23805927-23805946 | None:intergenic | 45.0% | |
TGGAGAAGGCTTGGAGAAAA+AGG | + | chr1_3:23805928-23805947 | None:intergenic | 45.0% | |
GGAGAAAAATGGAGAAGGCT+TGG | + | chr1_3:23805937-23805956 | None:intergenic | 45.0% | |
GAGAATGCCCACCCTAAAAA+AGG | - | chr1_3:23806097-23806116 | Msa0110750:intron | 45.0% | |
!! | TGTTGGTTTACCATACTCGG+AGG | - | chr1_3:23806329-23806348 | Msa0110750:intron | 45.0% |
! | GTTGGTTTACCATACTCGGA+GGG | - | chr1_3:23806330-23806349 | Msa0110750:intron | 45.0% |
TTGGTTTACCATACTCGGAG+GGG | - | chr1_3:23806331-23806350 | Msa0110750:intron | 45.0% | |
GGAATTTCTCATTCGGCAAG+GGG | - | chr1_3:23806463-23806482 | Msa0110750:intron | 45.0% | |
GAATTTCTCATTCGGCAAGG+GGG | - | chr1_3:23806464-23806483 | Msa0110750:intron | 45.0% | |
!! | AAGGGGGTACTGCATAAGTA+TGG | - | chr1_3:23806480-23806499 | Msa0110750:intron | 45.0% |
GTATTTCAGGAACGTCCAAG+TGG | - | chr1_3:23806967-23806986 | Msa0110750:intron | 45.0% | |
TTCACCAAATTCTGCCCACT+TGG | + | chr1_3:23806985-23807004 | None:intergenic | 45.0% | |
! | AAGTGGGCAGAATTTGGTGA+AGG | - | chr1_3:23806984-23807003 | Msa0110750:intron | 45.0% |
! | AGTGGGCAGAATTTGGTGAA+GGG | - | chr1_3:23806985-23807004 | Msa0110750:intron | 45.0% |
AACTACATTCTCCCCACAAC+AGG | + | chr1_3:23807013-23807032 | None:intergenic | 45.0% | |
!!! | CGACCCTGTTTCTGATCTTT+TGG | - | chr1_3:23807058-23807077 | Msa0110750:intron | 45.0% |
ACGTTACGAAACAGAACCTC+AGG | + | chr1_3:23807226-23807245 | None:intergenic | 45.0% | |
CGTAACGTAACTGTGTCTTC+GGG | - | chr1_3:23807238-23807257 | Msa0110750:intron | 45.0% | |
AGGGCTCAACCTTTAACTCT+TGG | - | chr1_3:23807265-23807284 | Msa0110750:intron | 45.0% | |
TTACTTCCACCACATTGCAG+TGG | - | chr1_3:23807419-23807438 | Msa0110750:CDS | 45.0% | |
TACACCCACATCCAACAACT+AGG | + | chr1_3:23807753-23807772 | None:intergenic | 45.0% | |
TGCTGCCAAACAAAAGCAGA+AGG | + | chr1_3:23808383-23808402 | None:intergenic | 45.0% | |
GACTTGAATGGATGTCCAAC+AGG | - | chr1_3:23808857-23808876 | Msa0110750:intron | 45.0% | |
GAAATCTATGTAGGCCCTGT+TGG | + | chr1_3:23808875-23808894 | None:intergenic | 45.0% | |
GCCGGAAAGATGAGAGAAAA+CGG | - | chr1_3:23809002-23809021 | Msa0110750:intron | 45.0% | |
! | CCCGTTTTCTCTCATCTTTC+CGG | + | chr1_3:23809006-23809025 | None:intergenic | 45.0% |
CCGGAAAGATGAGAGAAAAC+GGG | - | chr1_3:23809003-23809022 | Msa0110750:intron | 45.0% | |
TTTAATTGGTCCCACATGGG+TGG | - | chr1_3:23809526-23809545 | Msa0110750:CDS | 45.0% | |
! | GGGATTTTGGATACTGGAAG+AGG | + | chr1_3:23809703-23809722 | None:intergenic | 45.0% |
TTATGGCGGTGTATGGTAAG+AGG | - | chr1_3:23810049-23810068 | Msa0110750:intron | 45.0% | |
AGCTAGAGCCAAATTACAGC+TGG | - | chr1_3:23810827-23810846 | Msa0110750:intron | 45.0% | |
GCTAGAGCCAAATTACAGCT+GGG | - | chr1_3:23810828-23810847 | Msa0110750:intron | 45.0% | |
TGGCTATCCCAGCTGTAATT+TGG | + | chr1_3:23810838-23810857 | None:intergenic | 45.0% | |
! | CAGTAATTTGGTTCAGGCTC+TGG | + | chr1_3:23810858-23810877 | None:intergenic | 45.0% |
AGCCTGAACCAAATTACTGC+TGG | - | chr1_3:23810859-23810878 | Msa0110750:intron | 45.0% | |
GCCTGAACCAAATTACTGCT+GGG | - | chr1_3:23810860-23810879 | Msa0110750:intron | 45.0% | |
! | TCCCAGCAGTAATTTGGTTC+AGG | + | chr1_3:23810864-23810883 | None:intergenic | 45.0% |
TGGCTATCCCAGCAGTAATT+TGG | + | chr1_3:23810870-23810889 | None:intergenic | 45.0% | |
TGGTTCTCCGAAGTTCAATC+TGG | + | chr1_3:23810896-23810915 | None:intergenic | 45.0% | |
AGATTGAACTTCGGAGAACC+AGG | - | chr1_3:23810895-23810914 | Msa0110750:intron | 45.0% | |
TAAAGCTGGAATTCTCGTGC+AGG | - | chr1_3:23810989-23811008 | Msa0110750:intron | 45.0% | |
! | CTATCTGCCTCAAGTTGCAT+TGG | - | chr1_3:23811056-23811075 | Msa0110750:intron | 45.0% |
AGGAATAGCAGAGAAGGAAC+TGG | + | chr1_3:23811192-23811211 | None:intergenic | 45.0% | |
!! | AGGAGCTCTAAGTTGAGACA+TGG | + | chr1_3:23811471-23811490 | None:intergenic | 45.0% |
GTCTCAACTTAGAGCTCCTA+AGG | - | chr1_3:23811472-23811491 | Msa0110750:intron | 45.0% | |
! | GGGGTACCAGTCCATATATT+TGG | + | chr1_3:23811557-23811576 | None:intergenic | 45.0% |
!! | AATATATGGACTGGTACCCC+TGG | - | chr1_3:23811557-23811576 | Msa0110750:intron | 45.0% |
GTAGAAAGGTAGGTGAGGAA+TGG | - | chr1_3:23811624-23811643 | Msa0110750:CDS | 45.0% | |
GGAATGGTTTACCACTACGA+AGG | - | chr1_3:23811640-23811659 | Msa0110750:intron | 45.0% | |
ATGGTTTACCACTACGAAGG+TGG | - | chr1_3:23811643-23811662 | Msa0110750:intron | 45.0% | |
AACCCCAGTTCAAAACACAG+TGG | + | chr1_3:23812474-23812493 | None:intergenic | 45.0% | |
GTGAAGGGAGAAGAAGGAAA+TGG | - | chr1_3:23812589-23812608 | Msa0110750:intron | 45.0% | |
GTTACATAGCTGGCACTTCA+TGG | + | chr1_3:23812899-23812918 | None:intergenic | 45.0% | |
TCACATAATGTCAGCCCTCA+TGG | + | chr1_3:23813255-23813274 | None:intergenic | 45.0% | |
ATGAGGGCTGACATTATGTG+AGG | - | chr1_3:23813254-23813273 | Msa0110750:intron | 45.0% | |
GTCAAACTGTTGTTGCAGGA+TGG | - | chr1_3:23813445-23813464 | Msa0110750:CDS | 45.0% | |
TGGTTCAACATAGCAGAAGG+AGG | - | chr1_3:23813520-23813539 | Msa0110750:intron | 45.0% | |
CTATTGACAGGACCAAATGG+TGG | - | chr1_3:23813580-23813599 | Msa0110750:intron | 45.0% | |
! | ATTTGTGCTGCTGCACTACT+TGG | - | chr1_3:23813628-23813647 | Msa0110750:intron | 45.0% |
! | TTTGTGCTGCTGCACTACTT+GGG | - | chr1_3:23813629-23813648 | Msa0110750:intron | 45.0% |
GTCAAAATAGGGAATCACGG+CGG | + | chr1_3:23813683-23813702 | None:intergenic | 45.0% | |
CATTGTTCACAAGGAGGAAG+AGG | - | chr1_3:23814488-23814507 | Msa0110750:intron | 45.0% | |
AAGGAGGAAGAGGCAAATGT+GGG | - | chr1_3:23814498-23814517 | Msa0110750:intron | 45.0% | |
GGTCCTTAAAAGTCCCACAT+TGG | - | chr1_3:23814643-23814662 | Msa0110750:intron | 45.0% | |
! | CACCCAATGTGGGACTTTTA+AGG | + | chr1_3:23814649-23814668 | None:intergenic | 45.0% |
! | TGCCTTTTCTCACCCAATGT+GGG | + | chr1_3:23814659-23814678 | None:intergenic | 45.0% |
! | ATGCCTTTTCTCACCCAATG+TGG | + | chr1_3:23814660-23814679 | None:intergenic | 45.0% |
! | TCCTTCTTAACATGGGCTAC+AGG | - | chr1_3:23815269-23815288 | Msa0110750:CDS | 45.0% |
ACCTGTAGCCCATGTTAAGA+AGG | + | chr1_3:23815273-23815292 | None:intergenic | 45.0% | |
! | TTCTTAACATGGGCTACAGG+TGG | - | chr1_3:23815272-23815291 | Msa0110750:CDS | 45.0% |
GAACTTCGATCCATCATTGC+TGG | - | chr1_3:23815303-23815322 | Msa0110750:CDS | 45.0% | |
AACAAGCACAAGGCTCCTTT+CGG | + | chr1_3:23815334-23815353 | None:intergenic | 45.0% | |
! | CTTTTGCAGTCTCTGTTCCT+CGG | + | chr1_3:23815368-23815387 | None:intergenic | 45.0% |
GAGGAACAGAGACTGCAAAA+GGG | - | chr1_3:23815367-23815386 | Msa0110750:CDS | 45.0% | |
GTTCTTGATGTTCAGTGGCA+AGG | + | chr1_3:23815478-23815497 | None:intergenic | 45.0% | |
ATGGGCACAACTTGCATTGA+TGG | - | chr1_3:23815513-23815532 | Msa0110750:intron | 45.0% | |
CCATCTTGCAGAATCCAAGT+AGG | + | chr1_3:23815549-23815568 | None:intergenic | 45.0% | |
CCTACTTGGATTCTGCAAGA+TGG | - | chr1_3:23815546-23815565 | Msa0110750:intron | 45.0% | |
! | TTTGAAACTGCCAAGAGGGA+AGG | - | chr1_3:23815591-23815610 | Msa0110750:intron | 45.0% |
TGAAGAGCCTATAGTCATCG+GGG | + | chr1_3:23815952-23815971 | None:intergenic | 45.0% | |
CACTTGCCTATGTTAAAGGG+TGG | - | chr1_3:23816083-23816102 | Msa0110750:intron | 45.0% | |
CTCAGCTTTCTGTCCTATAG+AGG | + | chr1_3:23816298-23816317 | None:intergenic | 45.0% | |
!! | TGTGATGGACTGATGACAGA+CGG | - | chr1_3:23816651-23816670 | Msa0110750:intron | 45.0% |
ATGACAGACGGATAATCTCG+AGG | - | chr1_3:23816663-23816682 | Msa0110750:intron | 45.0% | |
CGTGCACATCGATCAAAAGA+AGG | - | chr1_3:23816694-23816713 | Msa0110750:intron | 45.0% | |
TAGCAGCGTTTCTATTTGGC+AGG | + | chr1_3:23816770-23816789 | None:intergenic | 45.0% | |
ATCAACCAACTTCCGAATCG+AGG | - | chr1_3:23816790-23816809 | Msa0110750:intron | 45.0% | |
!! | TATATTATATAATATATATC+TGG | - | chr1_3:23805654-23805673 | Msa0110750:intron | 5.0% |
!! | TCCCTCGGTGTCTGTTCTTA+AGG | - | chr1_3:23801811-23801830 | Msa0110750:three_prime_UTR | 50.0% |
GAGAAAGGGAACGAAAGCGA+GGG | + | chr1_3:23801937-23801956 | None:intergenic | 50.0% | |
AGAGAAAGGGAACGAAAGCG+AGG | + | chr1_3:23801938-23801957 | None:intergenic | 50.0% | |
GAGGGAATGAAGGAAGAAGG+AGG | + | chr1_3:23801980-23801999 | None:intergenic | 50.0% | |
CGAGAGGGAATGAAGGAAGA+AGG | + | chr1_3:23801983-23802002 | None:intergenic | 50.0% | |
GAGGAAACGAGAGGGAATGA+AGG | + | chr1_3:23801990-23802009 | None:intergenic | 50.0% | |
TCATTCCCTCTCGTTTCCTC+AGG | - | chr1_3:23801990-23802009 | Msa0110750:three_prime_UTR | 50.0% | |
!! | CGTGTCAGTGTGTTTGGTGT+CGG | + | chr1_3:23802355-23802374 | None:intergenic | 50.0% |
ACACCAAACACACTGACACG+TGG | - | chr1_3:23802355-23802374 | Msa0110750:intron | 50.0% | |
TGTCCACGTGTCAGTGTGTT+TGG | + | chr1_3:23802361-23802380 | None:intergenic | 50.0% | |
ACCCGACATGACACAAACAC+CGG | - | chr1_3:23802715-23802734 | Msa0110750:intron | 50.0% | |
ACCGGTGTTTGTGTCATGTC+GGG | + | chr1_3:23802719-23802738 | None:intergenic | 50.0% | |
TCACTCGCTCACTCTTAGGT+TGG | + | chr1_3:23802933-23802952 | None:intergenic | 50.0% | |
AGTCTCACTCGCTCACTCTT+AGG | + | chr1_3:23802937-23802956 | None:intergenic | 50.0% | |
TGAAGGCTACTATGGGGAAC+AGG | - | chr1_3:23803043-23803062 | Msa0110750:CDS | 50.0% | |
GGTCGGGGATTGTATCTCAT+AGG | - | chr1_3:23803064-23803083 | Msa0110750:CDS | 50.0% | |
!!! | ACCGGCCAACCCCAATTTTT+TGG | - | chr1_3:23803145-23803164 | Msa0110750:CDS | 50.0% |
!!! | GGCCAACCCCAATTTTTTGG+AGG | - | chr1_3:23803148-23803167 | Msa0110750:CDS | 50.0% |
GGCCTCCAAAAAATTGGGGT+TGG | + | chr1_3:23803153-23803172 | None:intergenic | 50.0% | |
CACTCCCCCTTGAAACTTTC+CGG | + | chr1_3:23803673-23803692 | None:intergenic | 50.0% | |
CTGCAACTCCTGCCATAGTT+TGG | + | chr1_3:23803890-23803909 | None:intergenic | 50.0% | |
TGTTTGTGCAGTCTGAAGGC+AGG | - | chr1_3:23804076-23804095 | Msa0110750:intron | 50.0% | |
GCGGGTTTAAATCCCTTTGG+TGG | - | chr1_3:23804433-23804452 | Msa0110750:intron | 50.0% | |
TCAGATAGCATCCCCAAAGC+TGG | - | chr1_3:23804463-23804482 | Msa0110750:intron | 50.0% | |
ACAACAGGGCAACCAGCTTT+GGG | + | chr1_3:23804478-23804497 | None:intergenic | 50.0% | |
TGGTTGCCCTGTTGTGGTAT+TGG | - | chr1_3:23804483-23804502 | Msa0110750:intron | 50.0% | |
TGCTGATGTCAGATTTGGGG+AGG | - | chr1_3:23804821-23804840 | Msa0110750:intron | 50.0% | |
GCTGATGTCAGATTTGGGGA+GGG | - | chr1_3:23804822-23804841 | Msa0110750:intron | 50.0% | |
! | TCTTGGTTCGAGCTTGAGCT+GGG | + | chr1_3:23805286-23805305 | None:intergenic | 50.0% |
! | TTCTTGGTTCGAGCTTGAGC+TGG | + | chr1_3:23805287-23805306 | None:intergenic | 50.0% |
ACTTTCAGGCATGCTCATCC+AGG | - | chr1_3:23805489-23805508 | Msa0110750:CDS | 50.0% | |
CCTACTACAGGCATAGGTTC+TGG | + | chr1_3:23805564-23805583 | None:intergenic | 50.0% | |
CCAGAACCTATGCCTGTAGT+AGG | - | chr1_3:23805561-23805580 | Msa0110750:intron | 50.0% | |
GGAAGATAGGAGAGAAAGGG+AGG | - | chr1_3:23805705-23805724 | Msa0110750:intron | 50.0% | |
ATAGGAGAGAAAGGGAGGGA+GGG | - | chr1_3:23805710-23805729 | Msa0110750:intron | 50.0% | |
GAGAAAAAGGGGATGGAGGA+AGG | + | chr1_3:23805915-23805934 | None:intergenic | 50.0% | |
CTTGGAGAAAAAGGGGATGG+AGG | + | chr1_3:23805919-23805938 | None:intergenic | 50.0% | |
AGGCTTGGAGAAAAAGGGGA+TGG | + | chr1_3:23805922-23805941 | None:intergenic | 50.0% | |
AACTGTATCCCCTCCGAGTA+TGG | + | chr1_3:23806342-23806361 | None:intergenic | 50.0% | |
TGATTTCCTGGGAAACGCTG+CGG | - | chr1_3:23806872-23806891 | Msa0110750:intron | 50.0% | |
AATTATCCGCAGCGTTTCCC+AGG | + | chr1_3:23806881-23806900 | None:intergenic | 50.0% | |
ACGTCCAAGTGGGCAGAATT+TGG | - | chr1_3:23806978-23806997 | Msa0110750:intron | 50.0% | |
! | GTGGGCAGAATTTGGTGAAG+GGG | - | chr1_3:23806986-23807005 | Msa0110750:intron | 50.0% |
! | TGGGCAGAATTTGGTGAAGG+GGG | - | chr1_3:23806987-23807006 | Msa0110750:intron | 50.0% |
! | GCTCTATGGTCTTGATCCTG+AGG | - | chr1_3:23807207-23807226 | Msa0110750:CDS | 50.0% |
ATCTGGATTTCCTGCGTCTC+AGG | - | chr1_3:23807356-23807375 | Msa0110750:CDS | 50.0% | |
GGTAATCCACTGCAATGTGG+TGG | + | chr1_3:23807428-23807447 | None:intergenic | 50.0% | |
TCCATTCATGAAGGCCCTTG+CGG | - | chr1_3:23808810-23808829 | Msa0110750:intron | 50.0% | |
ACATAAGCAGACCTCCGCAA+GGG | + | chr1_3:23808827-23808846 | None:intergenic | 50.0% | |
TACATAAGCAGACCTCCGCA+AGG | + | chr1_3:23808828-23808847 | None:intergenic | 50.0% | |
!!! | CCAAGTTTTGGAGCTCACCA+AGG | + | chr1_3:23809579-23809598 | None:intergenic | 50.0% |
CCTTGGTGAGCTCCAAAACT+TGG | - | chr1_3:23809576-23809595 | Msa0110750:CDS | 50.0% | |
GCCAGAGCCAGATTGAACTT+CGG | - | chr1_3:23810886-23810905 | Msa0110750:intron | 50.0% | |
! | TCCGAAGTTCAATCTGGCTC+TGG | + | chr1_3:23810890-23810909 | None:intergenic | 50.0% |
ACAGGAAGCAGTGTGGTTCA+AGG | - | chr1_3:23811517-23811536 | Msa0110750:intron | 50.0% | |
CAGGAAGCAGTGTGGTTCAA+GGG | - | chr1_3:23811518-23811537 | Msa0110750:intron | 50.0% | |
GTTTACCACTACGAAGGTGG+AGG | - | chr1_3:23811646-23811665 | Msa0110750:intron | 50.0% | |
CTTGCAGTGAAGGGAGAAGA+AGG | - | chr1_3:23812583-23812602 | Msa0110750:intron | 50.0% | |
AGTGCCAGCTATGTAACCTC+AGG | - | chr1_3:23812902-23812921 | Msa0110750:intron | 50.0% | |
GTCTCCTGAGGTTACATAGC+TGG | + | chr1_3:23812909-23812928 | None:intergenic | 50.0% | |
TTGACAGGACCAAATGGTGG+TGG | - | chr1_3:23813583-23813602 | Msa0110750:intron | 50.0% | |
GCTGCACTACTTGGGATATG+TGG | - | chr1_3:23813637-23813656 | Msa0110750:intron | 50.0% | |
CTTAATTGCGGCCAACCCTT+TGG | + | chr1_3:23814036-23814055 | None:intergenic | 50.0% | |
!! | CAAAGGGTTGGCCGCAATTA+AGG | - | chr1_3:23814034-23814053 | Msa0110750:intron | 50.0% |
CAAGGAGGAAGAGGCAAATG+TGG | - | chr1_3:23814497-23814516 | Msa0110750:intron | 50.0% | |
GTCCCACATTGGGTGAGAAA+AGG | - | chr1_3:23814654-23814673 | Msa0110750:intron | 50.0% | |
!! | CCTTACAAAACCGGCTTGTG+AGG | + | chr1_3:23814718-23814737 | None:intergenic | 50.0% |
!! | CCTCACAAGCCGGTTTTGTA+AGG | - | chr1_3:23814715-23814734 | Msa0110750:intron | 50.0% |
TTCGGTGGTTCCAGCAATGA+TGG | + | chr1_3:23815316-23815335 | None:intergenic | 50.0% | |
TCATTGCTGGAACCACCGAA+AGG | - | chr1_3:23815316-23815335 | Msa0110750:CDS | 50.0% | |
CGAGGAACAGAGACTGCAAA+AGG | - | chr1_3:23815366-23815385 | Msa0110750:CDS | 50.0% | |
GCAAAAGGGACTTGCATTGC+AGG | - | chr1_3:23815381-23815400 | Msa0110750:intron | 50.0% | |
CTCAGGAATTCCTTCCCTCT+TGG | + | chr1_3:23815604-23815623 | None:intergenic | 50.0% | |
GAAGAGCCTATAGTCATCGG+GGG | + | chr1_3:23815951-23815970 | None:intergenic | 50.0% | |
TCGATCAAAAGAAGGGCTGC+AGG | - | chr1_3:23816702-23816721 | Msa0110750:intron | 50.0% | |
!! | CCAGGCTTTTTCCTGGAACT+AGG | + | chr1_3:23816747-23816766 | None:intergenic | 50.0% |
CCTAGTTCCAGGAAAAAGCC+TGG | - | chr1_3:23816744-23816763 | Msa0110750:intron | 50.0% | |
GGCTACTATGGGGAACAGGT+CGG | - | chr1_3:23803047-23803066 | Msa0110750:CDS | 55.0% | |
GCTACTATGGGGAACAGGTC+GGG | - | chr1_3:23803048-23803067 | Msa0110750:CDS | 55.0% | |
CTACTATGGGGAACAGGTCG+GGG | - | chr1_3:23803049-23803068 | Msa0110750:CDS | 55.0% | |
AATCCCTCCTCGTCCACAAC+CGG | - | chr1_3:23803127-23803146 | Msa0110750:CDS | 55.0% | |
!! | AAATTGGGGTTGGCCGGTTG+TGG | + | chr1_3:23803143-23803162 | None:intergenic | 55.0% |
CGGAAAGTTTCAAGGGGGAG+TGG | - | chr1_3:23803671-23803690 | Msa0110750:CDS | 55.0% | |
CAACAGGGCAACCAGCTTTG+GGG | + | chr1_3:23804477-23804496 | None:intergenic | 55.0% | |
CACAACAGGGCAACCAGCTT+TGG | + | chr1_3:23804479-23804498 | None:intergenic | 55.0% | |
CAAAGCTGGTTGCCCTGTTG+TGG | - | chr1_3:23804477-23804496 | Msa0110750:intron | 55.0% | |
GATGTCAGATTTGGGGAGGG+TGG | - | chr1_3:23804825-23804844 | Msa0110750:intron | 55.0% | |
GATAGGAGAGAAAGGGAGGG+AGG | - | chr1_3:23805709-23805728 | Msa0110750:intron | 55.0% | |
TAGGAGAGAAAGGGAGGGAG+GGG | - | chr1_3:23805711-23805730 | Msa0110750:intron | 55.0% | |
TGCAGAGGGGTTAGAGCTCT+TGG | - | chr1_3:23806123-23806142 | Msa0110750:intron | 55.0% | |
GCAGAGGGGTTAGAGCTCTT+GGG | - | chr1_3:23806124-23806143 | Msa0110750:intron | 55.0% | |
!! | CGTCTCAGGTGTCATTCCGA+CGG | - | chr1_3:23807370-23807389 | Msa0110750:CDS | 55.0% |
!! | TCAGGTGTCATTCCGACGGA+TGG | - | chr1_3:23807374-23807393 | Msa0110750:CDS | 55.0% |
TCCGCAAGGGCCTTCATGAA+TGG | + | chr1_3:23808814-23808833 | None:intergenic | 55.0% | |
ATTCATGAAGGCCCTTGCGG+AGG | - | chr1_3:23808813-23808832 | Msa0110750:intron | 55.0% | |
AACCCAGTAGCCACCCATGT+GGG | + | chr1_3:23809539-23809558 | None:intergenic | 55.0% | |
TAACCCAGTAGCCACCCATG+TGG | + | chr1_3:23809540-23809559 | None:intergenic | 55.0% | |
CGACTTCACATCCAGCAACC+TGG | + | chr1_3:23811115-23811134 | None:intergenic | 55.0% | |
TTCCGTGGACAAAGCAGCTG+AGG | - | chr1_3:23811286-23811305 | Msa0110750:intron | 55.0% | |
! | GTCCTCAGCTGCTTTGTCCA+CGG | + | chr1_3:23811291-23811310 | None:intergenic | 55.0% |
ACCACACTGCTTCCTGTTCC+CGG | + | chr1_3:23811514-23811533 | None:intergenic | 55.0% | |
! | CGAGTACTTGTGCTGACCGA+TGG | - | chr1_3:23814447-23814466 | Msa0110750:intron | 55.0% |
!! | CAAAACCGGCTTGTGAGGTG+AGG | + | chr1_3:23814713-23814732 | None:intergenic | 55.0% |
AAGCACAAGGCTCCTTTCGG+TGG | + | chr1_3:23815331-23815350 | None:intergenic | 55.0% | |
GCGTTTCTATTTGGCAGGCC+AGG | + | chr1_3:23816765-23816784 | None:intergenic | 55.0% | |
!! | GGAAGCCTCGATTCGGAAGT+TGG | + | chr1_3:23816798-23816817 | None:intergenic | 55.0% |
!! | AACCACACTCGGTGTGCGTG+TGG | - | chr1_3:23801779-23801798 | Msa0110750:three_prime_UTR | 60.0% |
GGACAGAGACCGCTGCCAAT+TGG | + | chr1_3:23805344-23805363 | None:intergenic | 60.0% | |
! | AGAAAGGGAGGGAGGGGCAT+TGG | - | chr1_3:23805717-23805736 | Msa0110750:intron | 60.0% |
!! | GAAAGGGAGGGAGGGGCATT+GGG | - | chr1_3:23805718-23805737 | Msa0110750:intron | 60.0% |
!! | GAGGGAGGGGCATTGGGTTA+GGG | - | chr1_3:23805724-23805743 | Msa0110750:intron | 60.0% |
!! | AGGGAGGGGCATTGGGTTAG+GGG | - | chr1_3:23805725-23805744 | Msa0110750:intron | 60.0% |
!! | AGGGGCATTGGGTTAGGGGA+GGG | - | chr1_3:23805729-23805748 | Msa0110750:intron | 60.0% |
TTGGTGAAGGGGGCCTGTTG+TGG | - | chr1_3:23806997-23807016 | Msa0110750:intron | 60.0% | |
TGGTGAAGGGGGCCTGTTGT+GGG | - | chr1_3:23806998-23807017 | Msa0110750:intron | 60.0% | |
CGGAATGACACCTGAGACGC+AGG | + | chr1_3:23807369-23807388 | None:intergenic | 60.0% | |
GTCCCACATGGGTGGCTACT+GGG | - | chr1_3:23809534-23809553 | Msa0110750:CDS | 60.0% | |
CCACACTGCTTCCTGTTCCC+GGG | + | chr1_3:23811513-23811532 | None:intergenic | 60.0% | |
!! | ATGGACTGGTACCCCTGGAG+AGG | - | chr1_3:23811562-23811581 | Msa0110750:intron | 60.0% |
AGGTGGAGGCCGCCTTATCA+AGG | - | chr1_3:23811660-23811679 | Msa0110750:intron | 60.0% | |
! | GGAATCACGGCGGATTCAGC+AGG | + | chr1_3:23813673-23813692 | None:intergenic | 60.0% |
GCAGTCCTCACCTCACAAGC+CGG | - | chr1_3:23814705-23814724 | Msa0110750:intron | 60.0% | |
TGGCCACCCCCGATGACTAT+AGG | - | chr1_3:23815942-23815961 | Msa0110750:intron | 60.0% | |
GAGCCTATAGTCATCGGGGG+TGG | + | chr1_3:23815948-23815967 | None:intergenic | 60.0% | |
!! | TGGCAGGCCAGGCTTTTTCC+TGG | + | chr1_3:23816754-23816773 | None:intergenic | 60.0% |
!! | CACACTCGGTGTGCGTGTGG+CGG | - | chr1_3:23801782-23801801 | Msa0110750:three_prime_UTR | 65.0% |
!! | ACACTCGGTGTGCGTGTGGC+GGG | - | chr1_3:23801783-23801802 | Msa0110750:three_prime_UTR | 65.0% |
! | GTGTGGCGGGAAGAGTCCCT+CGG | - | chr1_3:23801796-23801815 | Msa0110750:three_prime_UTR | 65.0% |
TGGCCGGTTGTGGACGAGGA+GGG | + | chr1_3:23803133-23803152 | None:intergenic | 65.0% | |
TTGGCCGGTTGTGGACGAGG+AGG | + | chr1_3:23803134-23803153 | None:intergenic | 65.0% | |
!! | GGAGGGAGGGGCATTGGGTT+AGG | - | chr1_3:23805723-23805742 | Msa0110750:intron | 65.0% |
!! | GAGGGGCATTGGGTTAGGGG+AGG | - | chr1_3:23805728-23805747 | Msa0110750:intron | 65.0% |
GGTGAAGGGGGCCTGTTGTG+GGG | - | chr1_3:23806999-23807018 | Msa0110750:intron | 65.0% | |
GGTCCCACATGGGTGGCTAC+TGG | - | chr1_3:23809533-23809552 | Msa0110750:CDS | 65.0% | |
CCCGGGAACAGGAAGCAGTG+TGG | - | chr1_3:23811510-23811529 | Msa0110750:intron | 65.0% | |
CGCCACACGCACACCGAGTG+TGG | + | chr1_3:23801784-23801803 | None:intergenic | 70.0% | |
!! | GGGTTGGCCGGTTGTGGACG+AGG | + | chr1_3:23803137-23803156 | None:intergenic | 70.0% |
GGCGGCCTCCACCTTCGTAG+TGG | + | chr1_3:23811654-23811673 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 23801753 | 23817270 | 23801753 | ID=Msa0110750;Name=Msa0110750 |
chr1_3 | mRNA | 23801753 | 23817270 | 23801753 | ID=Msa0110750-mRNA-1;Parent=Msa0110750;Name=Msa0110750-mRNA-1;_AED=0.12;_eAED=0.12;_QI=140|1|1|1|0.95|0.91|23|345|1138 |
chr1_3 | exon | 23801753 | 23801877 | 23801753 | ID=Msa0110750-mRNA-1:exon:8301;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23801924 | 23802353 | 23801924 | ID=Msa0110750-mRNA-1:exon:8300;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23803004 | 23803732 | 23803004 | ID=Msa0110750-mRNA-1:exon:8299;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23805261 | 23805560 | 23805261 | ID=Msa0110750-mRNA-1:exon:8298;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23806376 | 23806433 | 23806376 | ID=Msa0110750-mRNA-1:exon:8297;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23807090 | 23807233 | 23807090 | ID=Msa0110750-mRNA-1:exon:8296;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23807342 | 23807598 | 23807342 | ID=Msa0110750-mRNA-1:exon:8295;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23807701 | 23807907 | 23807701 | ID=Msa0110750-mRNA-1:exon:8294;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23809443 | 23809616 | 23809443 | ID=Msa0110750-mRNA-1:exon:8293;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23810555 | 23810622 | 23810555 | ID=Msa0110750-mRNA-1:exon:8292;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23810739 | 23810797 | 23810739 | ID=Msa0110750-mRNA-1:exon:8291;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23811570 | 23811645 | 23811570 | ID=Msa0110750-mRNA-1:exon:8290;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23811719 | 23811824 | 23811719 | ID=Msa0110750-mRNA-1:exon:8289;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23811938 | 23812047 | 23811938 | ID=Msa0110750-mRNA-1:exon:8288;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23812395 | 23812559 | 23812395 | ID=Msa0110750-mRNA-1:exon:8287;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23813441 | 23813526 | 23813441 | ID=Msa0110750-mRNA-1:exon:8286;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23813699 | 23813763 | 23813699 | ID=Msa0110750-mRNA-1:exon:8285;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23813949 | 23813996 | 23813949 | ID=Msa0110750-mRNA-1:exon:8284;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23814525 | 23814644 | 23814525 | ID=Msa0110750-mRNA-1:exon:8283;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23814861 | 23814936 | 23814861 | ID=Msa0110750-mRNA-1:exon:8282;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23815025 | 23815122 | 23815025 | ID=Msa0110750-mRNA-1:exon:8281;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23815251 | 23815392 | 23815251 | ID=Msa0110750-mRNA-1:exon:8280;Parent=Msa0110750-mRNA-1 |
chr1_3 | exon | 23817012 | 23817270 | 23817012 | ID=Msa0110750-mRNA-1:exon:8279;Parent=Msa0110750-mRNA-1 |
chr1_3 | five_prime_UTR | 23817131 | 23817270 | 23817131 | ID=Msa0110750-mRNA-1:five_prime_utr;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23817012 | 23817130 | 23817012 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23815251 | 23815392 | 23815251 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23815025 | 23815122 | 23815025 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23814861 | 23814936 | 23814861 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23814525 | 23814644 | 23814525 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23813949 | 23813996 | 23813949 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23813699 | 23813763 | 23813699 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23813441 | 23813526 | 23813441 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23812395 | 23812559 | 23812395 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23811938 | 23812047 | 23811938 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23811719 | 23811824 | 23811719 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23811570 | 23811645 | 23811570 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23810739 | 23810797 | 23810739 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23810555 | 23810622 | 23810555 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23809443 | 23809616 | 23809443 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23807701 | 23807907 | 23807701 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23807342 | 23807598 | 23807342 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23807090 | 23807233 | 23807090 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23806376 | 23806433 | 23806376 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23805261 | 23805560 | 23805261 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23803004 | 23803732 | 23803004 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | CDS | 23802144 | 23802353 | 23802144 | ID=Msa0110750-mRNA-1:cds;Parent=Msa0110750-mRNA-1 |
chr1_3 | three_prime_UTR | 23801924 | 23802143 | 23801924 | ID=Msa0110750-mRNA-1:three_prime_utr;Parent=Msa0110750-mRNA-1 |
chr1_3 | three_prime_UTR | 23801753 | 23801877 | 23801753 | ID=Msa0110750-mRNA-1:three_prime_utr;Parent=Msa0110750-mRNA-1 |
Gene Sequence |
Protein sequence |