AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0017060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0017060 MtrunA17_Chr1g0168681 92.964 1137 63 3 1 1120 1 1137 0.0 2167
Msa0017060 MtrunA17_Chr7g0269931 36.126 191 116 2 743 927 1023 1213 3.27e-25 113
Msa0017060 MtrunA17_Chr5g0428751 33.333 195 120 4 747 936 430 619 9.16e-21 98.6
Msa0017060 MtrunA17_Chr6g0485261 32.474 194 111 4 748 926 897 1085 1.09e-18 92.4
Msa0017060 MtrunA17_Chr4g0062701 31.771 192 119 4 749 928 664 855 3.26e-18 90.5
Msa0017060 MtrunA17_Chr4g0047451 27.586 203 135 3 726 927 414 605 6.21e-17 86.7
Msa0017060 MtrunA17_Chr1g0203461 30.279 251 149 7 693 926 746 987 5.52e-16 83.6
Msa0017060 MtrunA17_Chr5g0399431 26.357 258 159 8 618 872 191 420 6.86e-15 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0017060 AT3G24320.1 64.996 1137 349 10 1 1118 1 1107 0.0 1476
Msa0017060 AT3G24320.2 65.804 889 276 4 231 1118 1 862 0.0 1184
Msa0017060 AT4G02070.2 36.634 202 117 6 731 926 1064 1260 1.27e-23 108
Msa0017060 AT4G02070.1 36.634 202 117 6 731 926 1067 1263 1.35e-23 108
Msa0017060 AT5G54090.1 34.199 231 129 7 726 948 424 639 1.76e-21 101
Msa0017060 AT3G24495.1 28.689 366 210 14 625 953 711 1062 1.91e-20 98.6
Msa0017060 AT4G25540.1 32.381 210 124 6 749 947 814 1016 3.65e-17 87.8
Msa0017060 AT3G18524.1 30.208 192 120 4 749 928 663 852 4.11e-16 84.3
Msa0017060 AT4G17380.1 27.727 220 143 4 746 964 547 751 1.38e-14 79.3
Msa0017060 AT4G17380.2 32.593 135 88 1 746 877 547 681 7.62e-14 76.6
Msa0017060 AT1G65070.1 30.939 181 122 2 747 926 397 575 8.01e-14 76.6
Msa0017060 AT1G65070.3 30.939 181 122 2 747 926 397 575 8.12e-14 76.6
Msa0017060 AT1G65070.2 30.939 181 122 2 747 926 397 575 1.09e-13 76.3
Msa0017060 AT1G65070.4 30.939 181 122 2 747 926 397 575 1.23e-13 76.3

Find 289 sgRNAs with CRISPR-Local

Find 1228 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTATGTATATGGACTTAT+TGG 0.101408 1_1:+28291542 Msa0017060:CDS
TTTGAAATAACCTTGAATTT+TGG 0.143407 1_1:-28294206 None:intergenic
TAACCGTGTCTTCGGGAAAT+AGG 0.174632 1_1:+28293186 Msa0017060:CDS
AAGATAAAGTGTTTCTTAAT+TGG 0.179571 1_1:+28304816 Msa0017060:CDS
GTTTACTCAGAATATTATTT+TGG 0.194211 1_1:+28305784 Msa0017060:three_prime_UTR
GTAGATGTTCCAAGAGTTAA+AGG 0.212866 1_1:-28293215 None:intergenic
CTTTGGTTCTCAGGTATGTT+AGG 0.214976 1_1:+28294146 Msa0017060:intron
CATCAGCTATATTGCTTAAC+AGG 0.226773 1_1:-28305695 None:intergenic
TATATACTACCTCAAGCTTC+TGG 0.228940 1_1:-28301525 None:intergenic
CGACCCTGTTTCTGATCTTT+TGG 0.234521 1_1:+28292999 Msa0017060:CDS
TGATGACAAAAGTTCATTTC+AGG 0.235726 1_1:+28302629 Msa0017060:CDS
GATAAAGATCTTCAGCTCTT+TGG 0.239855 1_1:-28304539 None:intergenic
CTTGGAACATCTACTCAAAT+TGG 0.241948 1_1:+28293224 Msa0017060:CDS
GATGGTAAGCATCGGAATTT+TGG 0.243574 1_1:+28305714 Msa0017060:CDS
AGATATAAAACGACGTTTCT+TGG 0.262650 1_1:-28291326 None:intergenic
TAGCATGATAGAGTCAAAAT+AGG 0.263250 1_1:-28302580 None:intergenic
ACTTGGGATATGTGGACTTA+TGG 0.268862 1_1:+28302533 Msa0017060:CDS
TTCTTGGTTCGAGCTTGAGC+TGG 0.277875 1_1:-28291310 None:intergenic
CGTCCCACGTGGGTGGCTAC+TGG 0.278644 1_1:+28295492 Msa0017060:CDS
TTGCCTTGACATTTGCTTCA+TGG 0.279311 1_1:-28300371 None:intergenic
CTTGATAGAAGTGGCTGTTT+GGG 0.282969 1_1:+28304327 Msa0017060:CDS
TTAGCGCCACAGATCATTCT+TGG 0.285978 1_1:+28306018 Msa0017060:three_prime_UTR
TTCTTTGGTTTCAGAATCTT+AGG 0.288160 1_1:+28291020 Msa0017060:intron
CCAGGAAACCCCTATGTATA+TGG 0.292216 1_1:+28291533 Msa0017060:CDS
TGATTAGCAGAGTTTCTATT+TGG 0.293781 1_1:-28305650 None:intergenic
TTCCTGGAACTAGGAAATAA+AGG 0.294559 1_1:-28305614 None:intergenic
CAAGGCAAACACTAGAGTTT+TGG 0.296309 1_1:+28300386 Msa0017060:CDS
TTCCTTTATTTCCTAGTTCC+AGG 0.297039 1_1:+28305612 Msa0017060:CDS
TCCCTCGGTGTCTGTTCTTA+AGG 0.300218 1_1:+28287463 Msa0017060:five_prime_UTR
ATCAATGGTAATAATTCTAA+TGG 0.303527 1_1:+28304630 Msa0017060:CDS
GAATCCTTTACTCACAATAT+TGG 0.308722 1_1:-28293387 None:intergenic
CTTGTTTCCTTTCCAAACTA+TGG 0.309084 1_1:+28289545 Msa0017060:CDS
AACGCTTTATACCAAATATA+TGG 0.309972 1_1:+28300121 Msa0017060:CDS
CCTATGTATATGGACTTATT+GGG 0.314962 1_1:+28291543 Msa0017060:CDS
CACAACAGGGCAACCAGCTC+TGG 0.320896 1_1:-28290483 None:intergenic
ACGTCCAAGTGGGCAGAATT+TGG 0.331384 1_1:+28292919 Msa0017060:CDS
ACCACACTGCTTCCTGTTCC+CGG 0.334290 1_1:-28300089 None:intergenic
CCATATACATAGGGGTTTCC+TGG 0.337764 1_1:-28291533 None:intergenic
GCAAAAGGGACTTGCATTGC+AGG 0.339981 1_1:+28304288 Msa0017060:CDS
ATTTGTGCTGCTGCACTACT+TGG 0.350396 1_1:+28302516 Msa0017060:CDS
TCTACAAAGTTCAATATGAT+TGG 0.351830 1_1:-28295394 None:intergenic
TCTTGATAGAAGTGGCTGTT+TGG 0.356538 1_1:+28304326 Msa0017060:CDS
CTGCAACTCCTGCCATAGTT+TGG 0.359730 1_1:-28289557 None:intergenic
TCTGCTATGTTGAACCAATA+TGG 0.360428 1_1:-28302402 None:intergenic
AACCGTGTCTTCGGGAAATA+GGG 0.360958 1_1:+28293187 Msa0017060:CDS
GAAATTATTGTATGTTGTAT+TGG 0.361271 1_1:+28305936 Msa0017060:three_prime_UTR
ACTAGACAATTCTTCCTGTT+TGG 0.369954 1_1:-28304604 None:intergenic
TCCTTATGTGAAACTTCAAT+TGG 0.371476 1_1:-28304714 None:intergenic
GGGGTACCAGTCCATATATT+TGG 0.374561 1_1:-28300132 None:intergenic
TTCTGAAGAATACGTCTTCA+TGG 0.375085 1_1:-28292388 None:intergenic
GGAGTTCTGCTATAAAATCT+TGG 0.386208 1_1:-28304764 None:intergenic
CAGTGTAACATGCTCAATTC+CGG 0.387233 1_1:+28294387 Msa0017060:CDS
TCCAATTGAAGTTTCACATA+AGG 0.387461 1_1:+28304713 Msa0017060:CDS
AGACATTCTGAATGGTTTGA+TGG 0.391680 1_1:+28292976 Msa0017060:CDS
TCGTAACGTAACCGTGTCTT+CGG 0.393490 1_1:+28293178 Msa0017060:CDS
AGGGAGAAATATCTTATTCC+CGG 0.394099 1_1:+28300070 Msa0017060:CDS
TAGTTGGTTTATTACCATAT+TGG 0.395583 1_1:+28302388 Msa0017060:CDS
CCTATATAGAGTTTCTTATC+TGG 0.395919 1_1:-28304900 None:intergenic
TTTGGTTCTCAGGTATGTTA+GGG 0.397494 1_1:+28294147 Msa0017060:intron
TTTGTGCTGTTGTTGTCTCT+TGG 0.407098 1_1:-28287410 None:intergenic
GTGAAGGGAGAAGAAGGAAA+TGG 0.407787 1_1:+28301479 Msa0017060:intron
ATATACTACCTCAAGCTTCT+GGG 0.410554 1_1:-28301524 None:intergenic
ATGGGCACAACTTGCATTGA+TGG 0.412451 1_1:+28304420 Msa0017060:CDS
AGGGCTCAACCTTTAACTCT+TGG 0.413129 1_1:+28293206 Msa0017060:CDS
CGTAACGTAACCGTGTCTTC+GGG 0.413318 1_1:+28293179 Msa0017060:CDS
ACGTACGATAGCCAAGAAAA+TGG 0.413329 1_1:-28288961 None:intergenic
TGCAGAAAACTATGCCAAAC+AGG 0.416552 1_1:+28304590 Msa0017060:CDS
TAAAGAAACACACCTTGATA+AGG 0.417802 1_1:-28300250 None:intergenic
TGTTTAATTTGTTCCTCTCC+AGG 0.418327 1_1:-28300153 None:intergenic
TGGAATACCTTCTTTGTTGA+AGG 0.419005 1_1:+28293335 Msa0017060:CDS
GAACTTCGATCCATCATTGC+TGG 0.422226 1_1:+28304210 Msa0017060:CDS
ACAGTGTTCTTGATGTTTAG+TGG 0.422282 1_1:-28304387 None:intergenic
CCAGATAAGAAACTCTATAT+AGG 0.426447 1_1:+28304900 Msa0017060:CDS
AACAAGCACAAGGCTCCTTT+CGG 0.426958 1_1:-28304238 None:intergenic
ATCAAACCATTCAGAATGTC+TGG 0.427480 1_1:-28292974 None:intergenic
TTGACCAAAAGATCAGAAAC+AGG 0.429669 1_1:-28293003 None:intergenic
TCAATTAGATTCATTGTTGA+GGG 0.430073 1_1:-28289592 None:intergenic
TTCGGTGGTTCCAGCAATGA+TGG 0.430365 1_1:-28304220 None:intergenic
CTTGATTTACCACCACCATT+TGG 0.431025 1_1:-28302480 None:intergenic
GGAGACTTCTATGAAACTCT+TGG 0.431107 1_1:+28290389 Msa0017060:CDS
TTCAATATTTCATTGAGCTC+AGG 0.431501 1_1:-28295459 None:intergenic
CTTGAATACTCAAATTTGCT+TGG 0.433294 1_1:+28289619 Msa0017060:CDS
ACATAGGTAAAGGAGCTCTA+TGG 0.435253 1_1:+28293134 Msa0017060:intron
AATATCTTATTCCCGGGAAC+AGG 0.435984 1_1:+28300077 Msa0017060:CDS
TGAAGGGAGAAGAAGGAAAT+GGG 0.436793 1_1:+28301480 Msa0017060:CDS
TTGAGAATATGGAGTCTGTA+TGG 0.437197 1_1:+28299800 Msa0017060:CDS
CCTACTACAGGCATAGGTTC+TGG 0.437803 1_1:-28291587 None:intergenic
TTCACCAAATTCTGCCCACT+TGG 0.439880 1_1:-28292923 None:intergenic
TAGCAGAGTTTCTATTTGGC+AGG 0.442928 1_1:-28305646 None:intergenic
GTCTCAACTTAGAGCTCCTA+AGG 0.447138 1_1:+28300050 Msa0017060:CDS
TCAGAATCTTAGGCAAACTT+TGG 0.447427 1_1:+28291030 Msa0017060:intron
CAATCATTATTTCTATTGAC+AGG 0.448373 1_1:+28302456 Msa0017060:CDS
GGAAGCCTCGATTCGGAAGT+TGG 0.450115 1_1:-28305674 None:intergenic
TATTTCTGCATACATCTTTG+AGG 0.450139 1_1:+28292469 Msa0017060:CDS
GAGATTGCATCCAAAATTCA+AGG 0.450407 1_1:+28294196 Msa0017060:CDS
TATGCGGGTTTAAATCCCTT+TGG 0.450508 1_1:+28290437 Msa0017060:CDS
CTCAGGAATTCCTTCCCTCT+TGG 0.450796 1_1:-28304508 None:intergenic
AAGGAGGAGAAGGAGAATTC+CGG 0.451171 1_1:-28287613 None:intergenic
TTGAAGAGCCTATAGTCATC+GGG 0.453265 1_1:-28304857 None:intergenic
TCATTCCCTCTCGTTTCCTC+AGG 0.457006 1_1:+28287642 Msa0017060:CDS
TAGTTCAAACATACTAAAAC+AGG 0.458944 1_1:+28305974 Msa0017060:three_prime_UTR
TTTCCTTTCCAAACTATGGC+AGG 0.460337 1_1:+28289549 Msa0017060:CDS
AAACATGCTTTAGATTCTAA+AGG 0.460656 1_1:+28300180 Msa0017060:CDS
TTGTTGAGTTGAGGTGAAGA+AGG 0.464192 1_1:-28287514 None:intergenic
GAGTTTCTATTTGGCAGGCT+AGG 0.467931 1_1:-28305641 None:intergenic
TCTTGGTTCGAGCTTGAGCT+GGG 0.468735 1_1:-28291309 None:intergenic
GAATAAGATATTTCTCCCTT+AGG 0.469726 1_1:-28300066 None:intergenic
GATTCTAAAGGTAGAAAGGT+AGG 0.469843 1_1:+28300192 Msa0017060:CDS
CGAGGAACAGAGACTGCAAA+AGG 0.471698 1_1:+28304273 Msa0017060:CDS
AGCAATGATGGATCGAAGTT+CGG 0.472676 1_1:-28304208 None:intergenic
GTCCCACGTGGGTGGCTACT+GGG 0.473923 1_1:+28295493 Msa0017060:CDS
GCTCTTTGGATAACAATCTC+AGG 0.474099 1_1:-28304525 None:intergenic
TCAATGGTAATAATTCTAAT+GGG 0.475596 1_1:+28304631 Msa0017060:CDS
TTCAATTAGATTCATTGTTG+AGG 0.475786 1_1:-28289593 None:intergenic
CGAGAGGGAATGAAGGAAGA+AGG 0.475917 1_1:-28287632 None:intergenic
ACACTCGGTGTGCGTGTGGC+GGG 0.476037 1_1:+28287435 Msa0017060:five_prime_UTR
CCAATAAGTCCATATACATA+GGG 0.476395 1_1:-28291542 None:intergenic
AATCGCAAGATGAAGATAGT+TGG 0.476644 1_1:+28302372 Msa0017060:CDS
CGTGCACATCGATCGAAAGA+AGG 0.477385 1_1:+28305573 Msa0017060:CDS
TTTAGATTCTAAAGGTAGAA+AGG 0.482930 1_1:+28300188 Msa0017060:CDS
CACATGAGCATATAACGCTT+TGG 0.483246 1_1:-28300487 None:intergenic
ATGAAGGAAGAAGGAGGAGA+AGG 0.487014 1_1:-28287623 None:intergenic
GAAGAAACACACGTAAATTC+CGG 0.487982 1_1:-28294406 None:intergenic
TCTTAATTGGCACTAGGGAA+TGG 0.489576 1_1:+28304829 Msa0017060:CDS
AGGAATTTCTCATTCGGCAA+GGG 0.490800 1_1:+28292338 Msa0017060:intron
GCTGCACTACTTGGGATATG+TGG 0.491552 1_1:+28302525 Msa0017060:CDS
GGAATCACGGCGGATTCAGC+AGG 0.494688 1_1:-28302558 None:intergenic
GAGACTTCTATGAAACTCTT+GGG 0.495809 1_1:+28290390 Msa0017060:CDS
GGTTGACGAAGTGATATCTC+TGG 0.499713 1_1:+28299723 Msa0017060:CDS
TTGGATGCAATCTCATAAGA+AGG 0.501103 1_1:-28294187 None:intergenic
GTTTAATTTGTTCCTCTCCA+GGG 0.501339 1_1:-28300152 None:intergenic
ATGGACAAACAAAACCTACT+TGG 0.502117 1_1:+28304439 Msa0017060:CDS
AGCATGATAGAGTCAAAATA+GGG 0.503339 1_1:-28302579 None:intergenic
CCCAATAAGTCCATATACAT+AGG 0.504850 1_1:-28291543 None:intergenic
GAGAATTCCGGAAAAGAGAA+AGG 0.505715 1_1:-28287601 None:intergenic
ACTTTCAGGCATGCTCATCC+AGG 0.506081 1_1:+28291515 Msa0017060:intron
AAGTAAGCACATCATTTATG+TGG 0.507055 1_1:-28299843 None:intergenic
ATCTGATCGTAGACCGCCAA+AGG 0.508138 1_1:-28290453 None:intergenic
GTGTTTCTTAATTGGCACTA+GGG 0.508539 1_1:+28304824 Msa0017060:CDS
CCACACTGCTTCCTGTTCCC+GGG 0.508620 1_1:-28300088 None:intergenic
GTTCTTGATGTTTAGTGGCA+AGG 0.508692 1_1:-28304382 None:intergenic
CCAGAACCTATGCCTGTAGT+AGG 0.508789 1_1:+28291587 Msa0017060:CDS
GCGGGTTTAAATCCCTTTGG+CGG 0.509226 1_1:+28290440 Msa0017060:CDS
ACAGGAAGCAGTGTGGTTCA+AGG 0.510474 1_1:+28300095 Msa0017060:CDS
TTCTGGGATTCTACTAATGT+AGG 0.510720 1_1:-28301508 None:intergenic
TTGGATGATCTTACACGCAA+TGG 0.510915 1_1:+28291049 Msa0017060:CDS
TGTTTGTGCAGTCTGAAGGC+AGG 0.511359 1_1:+28290064 Msa0017060:intron
AGTGTTTCTTAATTGGCACT+AGG 0.513671 1_1:+28304823 Msa0017060:CDS
GTAGTTCCAGACATTCTGAA+TGG 0.514478 1_1:+28292968 Msa0017060:CDS
AACACTGTACACAAAGCAAT+GGG 0.515181 1_1:+28304402 Msa0017060:CDS
TTTCTATTGACAGGACCAAA+TGG 0.518729 1_1:+28302465 Msa0017060:CDS
CACACTCGGTGTGCGTGTGG+CGG 0.519424 1_1:+28287434 Msa0017060:five_prime_UTR
TTTAATTTGTTCCTCTCCAG+GGG 0.519994 1_1:-28300151 None:intergenic
AGTAAGACCTTCAACAAAGA+AGG 0.520985 1_1:-28293342 None:intergenic
ATAGATTCTAACTTGAAGAA+TGG 0.524090 1_1:+28289643 Msa0017060:CDS
AAAGAAGGTATTCCATCCGT+TGG 0.527784 1_1:-28293327 None:intergenic
AGGTGGAGGCCGCCTTATCA+AGG 0.528089 1_1:+28300238 Msa0017060:CDS
AATACGTCTTCATGGTCTCT+AGG 0.528979 1_1:-28292380 None:intergenic
CTTGCAGTGAAGGGAGAAGA+AGG 0.529921 1_1:+28301473 Msa0017060:intron
ACAACAGGGCAACCAGCTCT+GGG 0.532588 1_1:-28290482 None:intergenic
CTTAACAGGAAGCCTCGATT+CGG 0.532794 1_1:-28305681 None:intergenic
TGTATTGTGGAGGAAGTTCA+AGG 0.534291 1_1:+28291286 Msa0017060:CDS
TACGTGTGTTTCTTCAGCAA+AGG 0.535657 1_1:+28294414 Msa0017060:CDS
TTTGAAACTGCCAAGAGGGA+AGG 0.541249 1_1:+28304498 Msa0017060:CDS
CGCCACACGCACACCGAGTG+TGG 0.543904 1_1:-28287433 None:intergenic
CTTGAAGAGCCTATAGTCAT+CGG 0.544068 1_1:-28304858 None:intergenic
ATTGAAACTCTTGATAGAAG+TGG 0.546230 1_1:+28304318 Msa0017060:CDS
TTCATCAGGAATAGCAGAGA+AGG 0.546650 1_1:-28299773 None:intergenic
CAACAATGAATCTAATTGAA+AGG 0.547593 1_1:+28289596 Msa0017060:CDS
CAGAGCTGGTTGCCCTGTTG+TGG 0.547718 1_1:+28290484 Msa0017060:CDS
TCAGGTGTCATTCCAACGGA+TGG 0.548977 1_1:+28293315 Msa0017060:intron
AATTGAAGTTTCACATAAGG+AGG 0.549162 1_1:+28304716 Msa0017060:CDS
GAGGAAACGAGAGGGAATGA+AGG 0.550774 1_1:-28287639 None:intergenic
AGACATTGACTTCAAAACCT+TGG 0.551104 1_1:+28295518 Msa0017060:CDS
AACCACACTCGGTGTGCGTG+TGG 0.551239 1_1:+28287431 Msa0017060:five_prime_UTR
CCATCTTGCAGCATCCAAGT+AGG 0.551358 1_1:-28304453 None:intergenic
TCAGATAGCATCCCCAGAGC+TGG 0.552374 1_1:+28290470 Msa0017060:CDS
TGCTAAGCTACTTGAATGGA+AGG 0.553515 1_1:+28295368 Msa0017060:CDS
TTTGTGCTGCTGCACTACTT+GGG 0.553681 1_1:+28302517 Msa0017060:CDS
GAGGGAATGAAGGAAGAAGG+AGG 0.554994 1_1:-28287629 None:intergenic
GTCCTCAGCTGCTTTGTCCA+CGG 0.556624 1_1:-28299866 None:intergenic
GTGCACATCGATCGAAAGAA+GGG 0.558891 1_1:+28305574 Msa0017060:CDS
CAGGAAGCAGTGTGGTTCAA+GGG 0.561932 1_1:+28300096 Msa0017060:CDS
CCTACTTGGATGCTGCAAGA+TGG 0.562471 1_1:+28304453 Msa0017060:CDS
ATTCTAACTTGAAGAATGGA+AGG 0.563858 1_1:+28289647 Msa0017060:CDS
TGTATTCTAGTTGAATATGC+GGG 0.564114 1_1:+28290422 Msa0017060:CDS
TTCTGCATACATCTTTGAGG+AGG 0.564693 1_1:+28292472 Msa0017060:CDS
AGAGAAAGGGAACGAAAGCG+AGG 0.564799 1_1:-28287587 None:intergenic
AGAATTCCGGAAAAGAGAAA+GGG 0.565713 1_1:-28287600 None:intergenic
TTGTATTCTAGTTGAATATG+CGG 0.566102 1_1:+28290421 Msa0017060:CDS
TTTATACCAAATATATGGAC+TGG 0.566964 1_1:+28300126 Msa0017060:CDS
AACATTTAATTCGTCCCACG+TGG 0.567215 1_1:+28295481 Msa0017060:CDS
TTGATAGAAGTGGCTGTTTG+GGG 0.567646 1_1:+28304328 Msa0017060:CDS
TGGGCAGAATTTGGTGAAGG+GGG 0.568706 1_1:+28292928 Msa0017060:CDS
GTAGAAAGGTAGGTGAGGAA+TGG 0.569613 1_1:+28300202 Msa0017060:CDS
GGGAGAAATATCTTATTCCC+GGG 0.571092 1_1:+28300071 Msa0017060:CDS
GAATTGTCTAGTTACATCAA+TGG 0.571307 1_1:+28304615 Msa0017060:CDS
TAGGAATTTCTCATTCGGCA+AGG 0.571429 1_1:+28292337 Msa0017060:intron
CTGTTAAGCAATATAGCTGA+TGG 0.574362 1_1:+28305696 Msa0017060:CDS
AGCCCTATTTCCCGAAGACA+CGG 0.578819 1_1:-28293189 None:intergenic
AAATGATGTGCTTACTTCCG+TGG 0.579926 1_1:+28299849 Msa0017060:CDS
GAACACTGTACACAAAGCAA+TGG 0.580622 1_1:+28304401 Msa0017060:CDS
AAGTGGGCAGAATTTGGTGA+AGG 0.584310 1_1:+28292925 Msa0017060:CDS
GTGTGGCGGGAAGAGTCCCT+CGG 0.585726 1_1:+28287448 Msa0017060:five_prime_UTR
GAGAAAGGGAACGAAAGCGA+GGG 0.587557 1_1:-28287586 None:intergenic
TTCCGTGGACAAAGCAGCTG+AGG 0.588630 1_1:+28299864 Msa0017060:CDS
AATATATGGACTGGTACCCC+TGG 0.588784 1_1:+28300135 Msa0017060:CDS
TTACTTCCACCACATTGCAG+TGG 0.589221 1_1:+28293360 Msa0017060:CDS
GTGGTAAATCAAGTTTACTT+CGG 0.593011 1_1:+28302490 Msa0017060:CDS
AGAGTCAAAATAGGGAATCA+CGG 0.597474 1_1:-28302571 None:intergenic
TAAAGGTAGAAAGGTAGGTG+AGG 0.597978 1_1:+28300197 Msa0017060:CDS
ACGATAGCCAAGAAAATGGT+TGG 0.599248 1_1:-28288957 None:intergenic
AAGCACAAGGCTCCTTTCGG+TGG 0.602348 1_1:-28304235 None:intergenic
TTATTGAATTTGTTGAGTTG+AGG 0.603523 1_1:-28287523 None:intergenic
CTGCAGAGTAAAACTTGACG+TGG 0.603855 1_1:-28290127 None:intergenic
AGTGGGCAGAATTTGGTGAA+GGG 0.606015 1_1:+28292926 Msa0017060:CDS
TTCATACCTACTACAGGCAT+AGG 0.606169 1_1:-28291593 None:intergenic
GGAATTTCTCATTCGGCAAG+GGG 0.606177 1_1:+28292339 Msa0017060:intron
GCTCTATGGTCTTGATCATG+AGG 0.608538 1_1:+28293148 Msa0017060:CDS
AGATTGCTAAGCTACTTGAA+TGG 0.611550 1_1:+28295364 Msa0017060:intron
TATTGGTTCAACATAGCAGA+AGG 0.611717 1_1:+28302405 Msa0017060:CDS
CTATGTATATGGACTTATTG+GGG 0.613324 1_1:+28291544 Msa0017060:CDS
GTGGGCAGAATTTGGTGAAG+GGG 0.613445 1_1:+28292927 Msa0017060:CDS
CATCTCAGGTGTCATTCCAA+CGG 0.614261 1_1:+28293311 Msa0017060:intron
ATCAACCAACTTCCGAATCG+AGG 0.616628 1_1:+28305669 Msa0017060:CDS
ATGTATGCAGAAATAAGTGA+TGG 0.616639 1_1:-28292461 None:intergenic
GAGGAACAGAGACTGCAAAA+GGG 0.616780 1_1:+28304274 Msa0017060:CDS
AGTAGAATCCCAGAAGCTTG+AGG 0.618095 1_1:+28301516 Msa0017060:CDS
TTTAATTCGTCCCACGTGGG+TGG 0.619599 1_1:+28295485 Msa0017060:CDS
ACAACAGCACAAACCACACT+CGG 0.619780 1_1:+28287420 Msa0017060:five_prime_UTR
ATGGTTTACCACTACGAAGG+TGG 0.620328 1_1:+28300221 Msa0017060:CDS
TACACGCAATGGTTATTCAG+TGG 0.620651 1_1:+28291060 Msa0017060:CDS
ATGCAGTTACGCGTAAACGT+TGG 0.622224 1_1:-28305742 None:intergenic
ACTCCTGCCATAGTTTGGAA+AGG 0.624441 1_1:-28289552 None:intergenic
TTTGTCTTGACAGTGTATTG+TGG 0.626135 1_1:+28291273 Msa0017060:intron
AATATGGAGTCTGTATGGAA+AGG 0.627047 1_1:+28299805 Msa0017060:CDS
TTGACAGGACCAAATGGTGG+TGG 0.627465 1_1:+28302471 Msa0017060:CDS
ATGTGAAGTTGCATCGCGTA+AGG 0.629759 1_1:+28299702 Msa0017060:CDS
GATGCAATCTCATAAGAAGG+AGG 0.635557 1_1:-28294184 None:intergenic
TCTGATCGTAGACCGCCAAA+GGG 0.635573 1_1:-28290452 None:intergenic
ATATAGCTGATGGTAAGCAT+CGG 0.637167 1_1:+28305706 Msa0017060:CDS
GTACCATGAAGCAAATGTCA+AGG 0.637451 1_1:+28300368 Msa0017060:CDS
GGGCAGAATTTGGTGAAGGG+GGG 0.640513 1_1:+28292929 Msa0017060:CDS
ATGGACTGGTACCCCTGGAG+AGG 0.642746 1_1:+28300140 Msa0017060:CDS
GTCTTGACAGTGTATTGTGG+AGG 0.642804 1_1:+28291276 Msa0017060:intron
GTTTACCACTACGAAGGTGG+AGG 0.643110 1_1:+28300224 Msa0017060:CDS
AAGCGTTATATGCTCATGTG+AGG 0.646209 1_1:+28300490 Msa0017060:CDS
TGAGGTGAAGAAGGAATGTG+TGG 0.647695 1_1:-28287505 None:intergenic
TCTTTGAGGAGGAATTCTTG+TGG 0.648468 1_1:+28292483 Msa0017060:CDS
TCTCAACTTAGAGCTCCTAA+GGG 0.649001 1_1:+28300051 Msa0017060:CDS
ATGCAATCTCATAAGAAGGA+GGG 0.653021 1_1:-28294183 None:intergenic
CTATTGACAGGACCAAATGG+TGG 0.654961 1_1:+28302468 Msa0017060:CDS
AGAAACACACCTTGATAAGG+CGG 0.656077 1_1:-28300247 None:intergenic
TAAGAAACTCTATATAGGAG+AGG 0.658752 1_1:+28304905 Msa0017060:CDS
AGCTGCAATTATGTTCACAT+CGG 0.663628 1_1:+28305905 Msa0017060:three_prime_UTR
AGGAGCTCTAAGTTGAGACA+TGG 0.668968 1_1:-28300046 None:intergenic
ACCTTAAGAACAGACACCGA+GGG 0.669156 1_1:-28287464 None:intergenic
AGTATACCTGAGGAAACGAG+AGG 0.669275 1_1:-28287648 None:intergenic
TCATTGCTGGAACCACCGAA+AGG 0.673113 1_1:+28304223 Msa0017060:CDS
TTATCAGGAATTTCTCACGA+GGG 0.673961 1_1:+28304675 Msa0017060:CDS
ACATTTAATTCGTCCCACGT+GGG 0.675111 1_1:+28295482 Msa0017060:CDS
CAATAAGTCCATATACATAG+GGG 0.675168 1_1:-28291541 None:intergenic
TGGTTCAACATAGCAGAAGG+AGG 0.676802 1_1:+28302408 Msa0017060:CDS
TTTATCAGGAATTTCTCACG+AGG 0.678520 1_1:+28304674 Msa0017060:CDS
GGCGGCCTCCACCTTCGTAG+TGG 0.679029 1_1:-28300229 None:intergenic
TATTTCAGGAACGTCCAAGT+GGG 0.679077 1_1:+28292909 Msa0017060:intron
TAAGCTACTTGAATGGAAGG+AGG 0.685452 1_1:+28295371 Msa0017060:CDS
TGAAGAGCCTATAGTCATCG+GGG 0.687428 1_1:-28304856 None:intergenic
GTATACCTGAGGAAACGAGA+GGG 0.689641 1_1:-28287647 None:intergenic
AAGTCATTAGCTGTATACAC+CGG 0.689688 1_1:-28305807 None:intergenic
GACGAAGTGATATCTCTGGA+TGG 0.690238 1_1:+28299727 Msa0017060:CDS
CAACAGGGCAACCAGCTCTG+GGG 0.696033 1_1:-28290481 None:intergenic
GGTAATCCACTGCAATGTGG+TGG 0.696559 1_1:-28293366 None:intergenic
ATGACAGACGGATAATCTCG+AGG 0.699731 1_1:+28305542 Msa0017060:intron
GAAGAGCCTATAGTCATCGG+GGG 0.700325 1_1:-28304855 None:intergenic
ATATTTCATCAACAAGCACA+AGG 0.705941 1_1:-28304248 None:intergenic
GTATTTCAGGAACGTCCAAG+TGG 0.706411 1_1:+28292908 Msa0017060:intron
AACCTTAAGAACAGACACCG+AGG 0.710075 1_1:-28287465 None:intergenic
TGACCAAAAGATCAGAAACA+GGG 0.713078 1_1:-28293002 None:intergenic
TTTGGTAATCACAAGCAATG+TGG 0.717978 1_1:-28300469 None:intergenic
TAACCCAGTAGCCACCCACG+TGG 0.719610 1_1:-28295496 None:intergenic
CCCGGGAACAGGAAGCAGTG+TGG 0.720310 1_1:+28300088 Msa0017060:CDS
GGAATGGTTTACCACTACGA+AGG 0.726194 1_1:+28300218 Msa0017060:CDS
GAATTTCTCATTCGGCAAGG+GGG 0.728126 1_1:+28292340 Msa0017060:CDS
AAAATGCCAATACCACAACA+GGG 0.735670 1_1:-28290496 None:intergenic
CTTGTTGATGAAATATGCCG+AGG 0.737644 1_1:+28304255 Msa0017060:CDS
AACCCAGTAGCCACCCACGT+GGG 0.758606 1_1:-28295495 None:intergenic
ATTGGTAATCCACTGCAATG+TGG 0.767045 1_1:-28293369 None:intergenic
GTCAAAATAGGGAATCACGG+CGG 0.796421 1_1:-28302568 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGAATTTTTTGATAAA+TGG + chr1_1:28287910-28287929 Msa0017060:intron 10.0%
!!! ATTTCTATTGTTTTATTTTA+TGG + chr1_1:28289244-28289263 Msa0017060:intron 10.0%
!!! AACATATTTTAAAAAGAAAA+GGG - chr1_1:28290361-28290380 None:intergenic 10.0%
!!! TATCTAAAATTTGTTTTATA+AGG - chr1_1:28291466-28291485 None:intergenic 10.0%
!!! ATAATTTAAAGTGAAAATTT+TGG - chr1_1:28293813-28293832 None:intergenic 10.0%
!!! CTATATTTTATACTTAATTT+TGG + chr1_1:28294316-28294335 Msa0017060:intron 10.0%
!! TAATTGAACAAAAATATAAA+AGG - chr1_1:28295911-28295930 None:intergenic 10.0%
!!! ATTATAATTTAATTTCTCAA+GGG - chr1_1:28296378-28296397 None:intergenic 10.0%
!!! TATTATAATTTAATTTCTCA+AGG - chr1_1:28296379-28296398 None:intergenic 10.0%
!! TGAGAAATTAAATTATAATA+TGG + chr1_1:28296379-28296398 Msa0017060:intron 10.0%
!! ATATATTATTAAAATAGGAA+AGG - chr1_1:28300329-28300348 None:intergenic 10.0%
!! TTTGCATATATTATTAAAAT+AGG - chr1_1:28300334-28300353 None:intergenic 10.0%
!!! TTAATCTATTTTGTTAAAAA+CGG - chr1_1:28301235-28301254 None:intergenic 10.0%
!! GGTAAATACTAAAATATTAT+TGG + chr1_1:28287934-28287953 Msa0017060:intron 15.0%
!! ATACTAAAATATTATTGGTA+AGG + chr1_1:28287939-28287958 Msa0017060:intron 15.0%
!!! TATTGTTTTATTTTATGGTA+TGG + chr1_1:28289249-28289268 Msa0017060:intron 15.0%
!! TTTCAATTACAAGTATTAAA+AGG - chr1_1:28289704-28289723 None:intergenic 15.0%
!!! TTTTTCTATCAACTTAAATT+GGG - chr1_1:28289843-28289862 None:intergenic 15.0%
!!! ATTTTTCTATCAACTTAAAT+TGG - chr1_1:28289844-28289863 None:intergenic 15.0%
!! TATTACTATAAAAAAGTTGA+TGG + chr1_1:28290028-28290047 Msa0017060:intron 15.0%
!!! ACATATTTTAAAAAGAAAAG+GGG - chr1_1:28290360-28290379 None:intergenic 15.0%
!!! GAACATATTTTAAAAAGAAA+AGG - chr1_1:28290362-28290381 None:intergenic 15.0%
!!! TAAGCTAAAAGAAATTTTAA+TGG + chr1_1:28290884-28290903 Msa0017060:intron 15.0%
!! TATTTATTTCAATAAAACTG+TGG + chr1_1:28290949-28290968 Msa0017060:intron 15.0%
!!! TGAAAGTTTTAACATTAAAT+CGG - chr1_1:28291502-28291521 None:intergenic 15.0%
!! ATCTAATTAGTAGTATAATT+AGG - chr1_1:28291634-28291653 None:intergenic 15.0%
!! TTTATTATATGATATGTATC+TGG + chr1_1:28291684-28291703 Msa0017060:intron 15.0%
!!! TTTGAGAAAAAAGTTTTAAA+GGG + chr1_1:28291813-28291832 Msa0017060:intron 15.0%
!!! TAATGCTATTTAATTGATTA+CGG - chr1_1:28291971-28291990 None:intergenic 15.0%
!! TTACGAAATAAATAAATCAA+TGG - chr1_1:28292152-28292171 None:intergenic 15.0%
!! AGAAATTCCTATAAAAAAAT+AGG - chr1_1:28292328-28292347 None:intergenic 15.0%
!! ATAACGATACAATAATTTAT+TGG - chr1_1:28292746-28292765 None:intergenic 15.0%
!! TTAAAAAATAAGCAGAATAA+GGG - chr1_1:28293842-28293861 None:intergenic 15.0%
!! ATTAAAAAATAAGCAGAATA+AGG - chr1_1:28293843-28293862 None:intergenic 15.0%
!!! TTTTAAACTTGTTTATACAT+TGG + chr1_1:28293944-28293963 Msa0017060:intron 15.0%
!! AAATATTAGGTAAAAGTTAA+AGG - chr1_1:28294543-28294562 None:intergenic 15.0%
!!! CTTTTACCTAATATTTATTT+AGG + chr1_1:28294547-28294566 Msa0017060:intron 15.0%
!! ACATTAAATTACGTTTATTT+AGG + chr1_1:28294926-28294945 Msa0017060:intron 15.0%
!! CATTAAATTACGTTTATTTA+GGG + chr1_1:28294927-28294946 Msa0017060:intron 15.0%
!! ACAAAAATATAAAAGGAATT+GGG - chr1_1:28295904-28295923 None:intergenic 15.0%
!! AACAAAAATATAAAAGGAAT+TGG - chr1_1:28295905-28295924 None:intergenic 15.0%
!!! ATTTGTTAGTATTGAAATTT+AGG + chr1_1:28296035-28296054 Msa0017060:intron 15.0%
!!! TTTGTTAGTATTGAAATTTA+GGG + chr1_1:28296036-28296055 Msa0017060:intron 15.0%
!!! AATGTTATCTTTTTTTTTTC+AGG + chr1_1:28299672-28299691 Msa0017060:intron 15.0%
!!! GTTTCTTTAAAAAATAAAAC+TGG + chr1_1:28300264-28300283 Msa0017060:intron 15.0%
!! AAAAACAATGATGTTTATAT+GGG - chr1_1:28300445-28300464 None:intergenic 15.0%
!! AAAAAACAATGATGTTTATA+TGG - chr1_1:28300446-28300465 None:intergenic 15.0%
!! CATTTGTTTATCTTAAAAAT+GGG + chr1_1:28300787-28300806 Msa0017060:intron 15.0%
!!! TTTGTATTTTTTTTTATTGG+AGG + chr1_1:28302204-28302223 Msa0017060:intron 15.0%
!!! TTGTATTTTTTTTTATTGGA+GGG + chr1_1:28302205-28302224 Msa0017060:intron 15.0%
!! ATTATCTTGAAGTTTATATA+AGG + chr1_1:28302762-28302781 Msa0017060:intron 15.0%
!! TTGGTTATTATTATGATATT+TGG - chr1_1:28302830-28302849 None:intergenic 15.0%
!!! GAATTATTTTATTGTTTCTT+GGG - chr1_1:28302902-28302921 None:intergenic 15.0%
!! AAACAATAAAATAATTCCAA+AGG + chr1_1:28302905-28302924 Msa0017060:intron 15.0%
!! AACAATAAAATAATTCCAAA+GGG + chr1_1:28302906-28302925 Msa0017060:intron 15.0%
!!! TCTTTTTGTTTTATCAAAAT+TGG - chr1_1:28303279-28303298 None:intergenic 15.0%
!! ATGTACTATTAAAATATTCA+CGG + chr1_1:28303985-28304004 Msa0017060:intron 15.0%
!! GTTTGTTTCAAAATATTTCT+TGG + chr1_1:28287727-28287746 Msa0017060:intron 20.0%
!!! TTGAATTTTTTGATAAATGG+AGG + chr1_1:28287913-28287932 Msa0017060:intron 20.0%
!! ACCAATAATAATTTGAGAAA+AGG + chr1_1:28288045-28288064 Msa0017060:intron 20.0%
!!! TCCTTTTCTCAAATTATTAT+TGG - chr1_1:28288049-28288068 None:intergenic 20.0%
!! TTCTTACCAATTTCAATTAA+TGG + chr1_1:28288214-28288233 Msa0017060:intron 20.0%
!! AACAATTTCAAATACACATA+CGG - chr1_1:28289068-28289087 None:intergenic 20.0%
!! AAAATGAAAACAATAATTGC+TGG + chr1_1:28289722-28289741 Msa0017060:intron 20.0%
!! CATTTATTTACATATCTCTT+CGG + chr1_1:28289759-28289778 Msa0017060:intron 20.0%
!!! TCTTTTTAAAATATGTTCTC+AGG + chr1_1:28290364-28290383 Msa0017060:intron 20.0%
!! AAATACAAATTTATCACCTT+TGG - chr1_1:28290934-28290953 None:intergenic 20.0%
!! TTATATATTTAATGTGCCTT+TGG + chr1_1:28290993-28291012 Msa0017060:intron 20.0%
!! GATTTAATGTTAAAACTTTC+AGG + chr1_1:28291501-28291520 Msa0017060:intron 20.0%
!!! GTTTGAGAAAAAAGTTTTAA+AGG + chr1_1:28291812-28291831 Msa0017060:intron 20.0%
!!! TTTTATAGGAATTTCTCATT+CGG + chr1_1:28292332-28292351 Msa0017060:intron 20.0%
!!! ATATCTAGATTTTTCTGTTT+TGG + chr1_1:28292630-28292649 Msa0017060:intron 20.0%
!!! CATTTTCTTATTCTTATATC+TGG + chr1_1:28293280-28293299 Msa0017060:intron 20.0%
!!! CATGTAAAATTTTAAACGAT+CGG - chr1_1:28293471-28293490 None:intergenic 20.0%
!!! AGTCTTTTAGTTATTAATTC+TGG + chr1_1:28293885-28293904 Msa0017060:intron 20.0%
!! AACAGACAATTACATAAATT+TGG - chr1_1:28293919-28293938 None:intergenic 20.0%
!! ATAAAAAGTAATGCAATAAG+AGG - chr1_1:28294043-28294062 None:intergenic 20.0%
!!! TTTGAAATAACCTTGAATTT+TGG - chr1_1:28294209-28294228 None:intergenic 20.0%
!!! TTTCCTCTGAAATAAAATAT+TGG + chr1_1:28294498-28294517 Msa0017060:intron 20.0%
!!! TTCCTCTGAAATAAAATATT+GGG + chr1_1:28294499-28294518 Msa0017060:intron 20.0%
!! AAAGGACCTAAATAAATATT+AGG - chr1_1:28294556-28294575 None:intergenic 20.0%
!! ACAAATCACAAAAAAGATAA+AGG - chr1_1:28294574-28294593 None:intergenic 20.0%
!!! ATCTTTTTTGTGATTTGTTT+TGG + chr1_1:28294576-28294595 Msa0017060:intron 20.0%
!! ATTTATCAGAAATAGACAAA+AGG - chr1_1:28294635-28294654 None:intergenic 20.0%
!! TAATTCAACTTAAGAATTCT+GGG - chr1_1:28294735-28294754 None:intergenic 20.0%
!!! AGAATTCTTAAGTTGAATTA+GGG + chr1_1:28294735-28294754 Msa0017060:intron 20.0%
!! AAGCAAAAATCATAGTAATT+AGG - chr1_1:28295078-28295097 None:intergenic 20.0%
!!! TAGTTACATGAATCTTTTTA+AGG - chr1_1:28295172-28295191 None:intergenic 20.0%
!!! AAAACTGTTGATAGAAAAAA+GGG - chr1_1:28295294-28295313 None:intergenic 20.0%
!!! TAAAACTGTTGATAGAAAAA+AGG - chr1_1:28295295-28295314 None:intergenic 20.0%
!!! TTATTTTCATATAAGCAAAG+TGG - chr1_1:28295574-28295593 None:intergenic 20.0%
!! CTTTGCTTATATGAAAATAA+AGG + chr1_1:28295574-28295593 Msa0017060:intron 20.0%
!! AGTAATCCTAAATATGATAA+GGG - chr1_1:28295683-28295702 None:intergenic 20.0%
!! AAACGTTATGAAACTAAAAA+AGG + chr1_1:28295797-28295816 Msa0017060:intron 20.0%
!! TAACAACATGAAAAAAGTTA+TGG + chr1_1:28295929-28295948 Msa0017060:intron 20.0%
!! ACTATGAAGATAAATAGTTA+TGG + chr1_1:28295985-28296004 Msa0017060:intron 20.0%
!! CTATGAAGATAAATAGTTAT+GGG + chr1_1:28295986-28296005 Msa0017060:intron 20.0%
!! TATGAAGATAAATAGTTATG+GGG + chr1_1:28295987-28296006 Msa0017060:intron 20.0%
!! ATTAGTATCCTGATTTAATT+AGG - chr1_1:28296179-28296198 None:intergenic 20.0%
!!! TGTGTTTCTATTTATGTTTT+GGG - chr1_1:28296409-28296428 None:intergenic 20.0%
!!! TTGTGTTTCTATTTATGTTT+TGG - chr1_1:28296410-28296429 None:intergenic 20.0%
!! TCTAATATAATAATAACACC+TGG - chr1_1:28296555-28296574 None:intergenic 20.0%
!! TATTATTGTTTGAATGATAG+AGG + chr1_1:28296684-28296703 Msa0017060:intron 20.0%
!! AAAATATATTAAAGATCTGC+TGG - chr1_1:28297634-28297653 None:intergenic 20.0%
!!! TATTATTGATTGAATGATAG+AGG + chr1_1:28299060-28299079 Msa0017060:intron 20.0%
!!! ATATGTTAAGAGTATTGATT+AGG - chr1_1:28299205-28299224 None:intergenic 20.0%
!! TTTATATCCTAAATTTCTTG+TGG - chr1_1:28299289-28299308 None:intergenic 20.0%
!! TACTATCTCACAAAAAATTT+AGG - chr1_1:28299367-28299386 None:intergenic 20.0%
!!! GATTTTATGTATTTTAAAGC+TGG + chr1_1:28299552-28299571 Msa0017060:intron 20.0%
!! ATATTCTCAAAAAATTCATC+AGG - chr1_1:28299790-28299809 None:intergenic 20.0%
!!! TGATGAATTTTTTGAGAATA+TGG + chr1_1:28299789-28299808 Msa0017060:CDS 20.0%
!!! CCATTTTTAAGATAAACAAA+TGG - chr1_1:28300789-28300808 None:intergenic 20.0%
!! CCATTTGTTTATCTTAAAAA+TGG + chr1_1:28300786-28300805 Msa0017060:intron 20.0%
!! TATAAAAACTTGATGTGTTA+TGG + chr1_1:28301544-28301563 Msa0017060:intron 20.0%
!! ATAAAAACTTGATGTGTTAT+GGG + chr1_1:28301545-28301564 Msa0017060:intron 20.0%
!! TAATAATAACCAATCCTATT+AGG + chr1_1:28302837-28302856 Msa0017060:intron 20.0%
!!! GGAATTATTTTATTGTTTCT+TGG - chr1_1:28302903-28302922 None:intergenic 20.0%
!! TAGTTAAAAATGTATGTTTG+TGG + chr1_1:28303528-28303547 Msa0017060:intron 20.0%
!!! AAAGTTATTAATTGCGATTT+TGG - chr1_1:28303690-28303709 None:intergenic 20.0%
!!! AGAATTTGATATTTTATGCT+TGG + chr1_1:28303817-28303836 Msa0017060:intron 20.0%
!! TGTACTATTAAAATATTCAC+GGG + chr1_1:28303986-28304005 Msa0017060:intron 20.0%
!!! ATAATTGTTGATTCTAGTTT+TGG - chr1_1:28304031-28304050 None:intergenic 20.0%
!! TAAGAAGGATAAAATGTTTA+AGG - chr1_1:28304165-28304184 None:intergenic 20.0%
!! ATCAATGGTAATAATTCTAA+TGG + chr1_1:28304630-28304649 Msa0017060:CDS 20.0%
!! TCAATGGTAATAATTCTAAT+GGG + chr1_1:28304631-28304650 Msa0017060:CDS 20.0%
!!! AATTCCTGATAAAAACTTTT+CGG - chr1_1:28304667-28304686 None:intergenic 20.0%
!!! AAGATAAAGTGTTTCTTAAT+TGG + chr1_1:28304816-28304835 Msa0017060:CDS 20.0%
!! AATTGATAAAAAGAATGAGT+TGG - chr1_1:28305049-28305068 None:intergenic 20.0%
!!! TAGGATTATTTTTTTATGTG+AGG - chr1_1:28305081-28305100 None:intergenic 20.0%
!!! GACTAAAAACAATTGTTATT+AGG - chr1_1:28305168-28305187 None:intergenic 20.0%
!! AAATGATAAACATTCCAAAA+AGG - chr1_1:28305496-28305515 None:intergenic 20.0%
!!! GTTTACTCAGAATATTATTT+TGG + chr1_1:28305784-28305803 Msa0017060:three_prime_UTR 20.0%
!!! AAGTTTTGCTAATGAAATTT+AGG + chr1_1:28305842-28305861 Msa0017060:three_prime_UTR 20.0%
!! AACTAATTCTAACAAAAATG+CGG - chr1_1:28305880-28305899 None:intergenic 20.0%
!! GAAATTATTGTATGTTGTAT+TGG + chr1_1:28305936-28305955 Msa0017060:three_prime_UTR 20.0%
!!! TTATTGAATTTGTTGAGTTG+AGG - chr1_1:28287526-28287545 None:intergenic 25.0%
!!! GATTTTGTTATTTGAAGTAG+TGG + chr1_1:28287983-28288002 Msa0017060:intron 25.0%
! TTACCAATTTCAATTAATGG+AGG + chr1_1:28288217-28288236 Msa0017060:intron 25.0%
! TTACCTCCATTAATTGAAAT+TGG - chr1_1:28288223-28288242 None:intergenic 25.0%
! TAAGTGCATGTTTGAATTAA+TGG + chr1_1:28288325-28288344 Msa0017060:intron 25.0%
!! TCATTTTCTCAAATTACTAC+CGG - chr1_1:28288400-28288419 None:intergenic 25.0%
! TGAAATTGTTAGAATGCAAA+TGG + chr1_1:28289078-28289097 Msa0017060:intron 25.0%
!! TTCCTTCTAAATTTAGAATG+AGG - chr1_1:28289164-28289183 None:intergenic 25.0%
! ATTTCGATGAATAGAACAAA+TGG + chr1_1:28289289-28289308 Msa0017060:intron 25.0%
!!! AGATATCATGTTTTAAAGAC+CGG + chr1_1:28289323-28289342 Msa0017060:intron 25.0%
!! GGTTTTCTATAAATATTCTG+TGG - chr1_1:28289512-28289531 None:intergenic 25.0%
! GAAACAAGAAAAAGAAAGTA+AGG - chr1_1:28289533-28289552 None:intergenic 25.0%
! TCAATTAGATTCATTGTTGA+GGG - chr1_1:28289595-28289614 None:intergenic 25.0%
! TTCAATTAGATTCATTGTTG+AGG - chr1_1:28289596-28289615 None:intergenic 25.0%
! CAACAATGAATCTAATTGAA+AGG + chr1_1:28289596-28289615 Msa0017060:CDS 25.0%
! ATAGATTCTAACTTGAAGAA+TGG + chr1_1:28289643-28289662 Msa0017060:CDS 25.0%
! AAAATTGATCCATAAGTTGT+GGG - chr1_1:28289888-28289907 None:intergenic 25.0%
! TAAAATTGATCCATAAGTTG+TGG - chr1_1:28289889-28289908 None:intergenic 25.0%
! AATACTATCCATCAAAATAG+AGG - chr1_1:28290012-28290031 None:intergenic 25.0%
!! GTCTTGTGTATTTAGTTTAA+AGG + chr1_1:28290238-28290257 Msa0017060:intron 25.0%
!!! AAACAGAAATTTGTTGAGAA+TGG - chr1_1:28290275-28290294 None:intergenic 25.0%
!! ACAAATTTCTGTTTTCTCTT+TGG + chr1_1:28290281-28290300 Msa0017060:intron 25.0%
!! TTTAAAATATGTTCTCAGGT+TGG + chr1_1:28290368-28290387 Msa0017060:intron 25.0%
!! TTGTATTCTAGTTGAATATG+CGG + chr1_1:28290421-28290440 Msa0017060:CDS 25.0%
!! TCAAGCTGTTTAATTTACAT+TGG + chr1_1:28290612-28290631 Msa0017060:intron 25.0%
! TCAAAGTTTAGCAATAATCA+TGG - chr1_1:28290740-28290759 None:intergenic 25.0%
! AAAACATGTATTTGTGAACA+CGG - chr1_1:28291253-28291272 None:intergenic 25.0%
! AAAAAATTCATACCTACTAC+AGG - chr1_1:28291602-28291621 None:intergenic 25.0%
!!! AAAGTTTTAAAGGGAAAAGT+AGG + chr1_1:28291822-28291841 Msa0017060:intron 25.0%
!!! CCTCTATATATCCTTTTTTA+GGG - chr1_1:28292112-28292131 None:intergenic 25.0%
! CCTAAAAAAGGATATATAGA+GGG + chr1_1:28292110-28292129 Msa0017060:intron 25.0%
!!! AGCAATGCCTATTTTTTTAT+AGG + chr1_1:28292318-28292337 Msa0017060:intron 25.0%
!! GTCTAATTTTTACGATGAAA+AGG - chr1_1:28292530-28292549 None:intergenic 25.0%
! AGAAAAATCTAGATATAGCA+AGG - chr1_1:28292626-28292645 None:intergenic 25.0%
! AATCAAATCAAGTAGAAGAA+AGG - chr1_1:28292661-28292680 None:intergenic 25.0%
! ATTACCAATATTGTGAGTAA+AGG + chr1_1:28293383-28293402 Msa0017060:intron 25.0%
! TGATTGAAGTGTAATTTCAA+AGG + chr1_1:28293555-28293574 Msa0017060:intron 25.0%
!! ACAATGATGTTAATTTGGTA+AGG - chr1_1:28294119-28294138 None:intergenic 25.0%
! AACAGACAATGATGTTAATT+TGG - chr1_1:28294124-28294143 None:intergenic 25.0%
!! TGACAGTTAACTTTTACATA+TGG + chr1_1:28294666-28294685 Msa0017060:intron 25.0%
! CTAATTCAACTTAAGAATTC+TGG - chr1_1:28294736-28294755 None:intergenic 25.0%
!!! CAGAATTCTTAAGTTGAATT+AGG + chr1_1:28294734-28294753 Msa0017060:intron 25.0%
!!! TTTCAAGTACATTTTTGACT+GGG + chr1_1:28294901-28294920 Msa0017060:intron 25.0%
! ATTACGTTTATTTAGGGAAA+AGG + chr1_1:28294933-28294952 Msa0017060:intron 25.0%
! CGAAAGAAAATTGATGAAAT+CGG + chr1_1:28294986-28295005 Msa0017060:intron 25.0%
!! TAAATTTTCTTCTTCCAGTT+TGG + chr1_1:28295225-28295244 Msa0017060:intron 25.0%
! TCTACAAAGTTCAATATGAT+TGG - chr1_1:28295397-28295416 None:intergenic 25.0%
! GTAATCCTAAATATGATAAG+GGG - chr1_1:28295682-28295701 None:intergenic 25.0%
! CAGTAATCCTAAATATGATA+AGG - chr1_1:28295684-28295703 None:intergenic 25.0%
! ATGAAGATAAATAGTTATGG+GGG + chr1_1:28295988-28296007 Msa0017060:intron 25.0%
!!! TAATTTTTTGTGCATATACC+AGG + chr1_1:28296145-28296164 Msa0017060:intron 25.0%
! ATCCTGATTTAATTAGGATT+AGG - chr1_1:28296173-28296192 None:intergenic 25.0%
!!! TGTTTCTATTTATGTTTTGG+GGG - chr1_1:28296407-28296426 None:intergenic 25.0%
!!! GTGTTTCTATTTATGTTTTG+GGG - chr1_1:28296408-28296427 None:intergenic 25.0%
! AAACACAACTTATTTGATGT+TGG + chr1_1:28296422-28296441 Msa0017060:intron 25.0%
! TTGGAAAATTATTCAATTCC+AGG + chr1_1:28296534-28296553 Msa0017060:intron 25.0%
! TAGAGGATACAAGTATTTAT+AGG + chr1_1:28296701-28296720 Msa0017060:intron 25.0%
! ATGAATCTTGATGTAGATAA+GGG + chr1_1:28296901-28296920 Msa0017060:intron 25.0%
! AATTTCCTACTCTGTTAATA+AGG - chr1_1:28297460-28297479 None:intergenic 25.0%
! CATGAAAAATGCAAATAGTA+TGG - chr1_1:28297601-28297620 None:intergenic 25.0%
!! GAGTTCTCTTTAAAAGATTT+GGG - chr1_1:28297726-28297745 None:intergenic 25.0%
!! AGAGTTCTCTTTAAAAGATT+TGG - chr1_1:28297727-28297746 None:intergenic 25.0%
!! CAAATAGATGCAATAAGTTT+TGG + chr1_1:28297823-28297842 Msa0017060:intron 25.0%
!! AGCTTCATAAAGCTTTATAT+GGG - chr1_1:28297932-28297951 None:intergenic 25.0%
!! AAGCTTCATAAAGCTTTATA+TGG - chr1_1:28297933-28297952 None:intergenic 25.0%
! ATCAATAATGCCTTTCTTAA+TGG - chr1_1:28298026-28298045 None:intergenic 25.0%
! GAATTATGAGAAATATGAGA+AGG + chr1_1:28298650-28298669 Msa0017060:intron 25.0%
! TAGAGGATACAAGTATTTAT+AGG + chr1_1:28296701-28296720 Msa0017060:intron 25.0%
! TTTAGGTGATGAATTATCAA+TGG - chr1_1:28299350-28299369 None:intergenic 25.0%
! AACGCTTTATACCAAATATA+TGG + chr1_1:28300121-28300140 Msa0017060:CDS 25.0%
! TTTATACCAAATATATGGAC+TGG + chr1_1:28300126-28300145 Msa0017060:CDS 25.0%
!! AAACATGCTTTAGATTCTAA+AGG + chr1_1:28300180-28300199 Msa0017060:CDS 25.0%
!! TTTAGATTCTAAAGGTAGAA+AGG + chr1_1:28300188-28300207 Msa0017060:CDS 25.0%
! TATGCAAAACAATTTGTCAT+AGG + chr1_1:28300346-28300365 Msa0017060:intron 25.0%
!!! TAGAGTTTTGGAACTTTTAA+GGG + chr1_1:28300398-28300417 Msa0017060:CDS 25.0%
!!! AAGTATTGAATTGTCAATGA+TGG + chr1_1:28300738-28300757 Msa0017060:intron 25.0%
!! CAATAGTGATTTCACAATTT+TGG - chr1_1:28300822-28300841 None:intergenic 25.0%
! ATGAGTACAATAAGAATCTA+GGG - chr1_1:28301140-28301159 None:intergenic 25.0%
! AATGAGTACAATAAGAATCT+AGG - chr1_1:28301141-28301160 None:intergenic 25.0%
!!! CAATAGTATTGGCTTATTTA+TGG + chr1_1:28301168-28301187 Msa0017060:intron 25.0%
!! GCAATATTTTACTTGAAATG+TGG - chr1_1:28301283-28301302 None:intergenic 25.0%
! TAATTAGCATAAAACATGCA+AGG - chr1_1:28301440-28301459 None:intergenic 25.0%
! TAAAAACTTGATGTGTTATG+GGG + chr1_1:28301546-28301565 Msa0017060:intron 25.0%
! GAATAACCTAGAATATTCAA+TGG - chr1_1:28301624-28301643 None:intergenic 25.0%
! TAAATAGAATTCAATCTCAC+GGG - chr1_1:28301927-28301946 None:intergenic 25.0%
! GTAAATAGAATTCAATCTCA+CGG - chr1_1:28301928-28301947 None:intergenic 25.0%
! CTGTAAAATATGAAGAACAT+TGG - chr1_1:28302024-28302043 None:intergenic 25.0%
!! TTCTTCATATTTTACAGCAA+TGG + chr1_1:28302027-28302046 Msa0017060:intron 25.0%
!!! TGTTTTGAAGCTATGTATTT+AGG + chr1_1:28302168-28302187 Msa0017060:intron 25.0%
!!! GTTTTGAAGCTATGTATTTA+GGG + chr1_1:28302169-28302188 Msa0017060:intron 25.0%
!!! TTTTGAAGCTATGTATTTAG+GGG + chr1_1:28302170-28302189 Msa0017060:intron 25.0%
! AATAAAGAACAGCTAGTAAA+TGG - chr1_1:28302273-28302292 None:intergenic 25.0%
!!! CAATCATTATTTCTATTGAC+AGG + chr1_1:28302456-28302475 Msa0017060:CDS 25.0%
! CCAACTATAGATGAATTTAA+GGG - chr1_1:28302677-28302696 None:intergenic 25.0%
! TCCAACTATAGATGAATTTA+AGG - chr1_1:28302678-28302697 None:intergenic 25.0%
! ATTGCTTCATTGTCTATATA+AGG + chr1_1:28302713-28302732 Msa0017060:intron 25.0%
!!! TTTTGATGTTTGGCTTTATT+TGG - chr1_1:28302800-28302819 None:intergenic 25.0%
!!! TGGTTTGTTATTTTGATGTT+TGG - chr1_1:28302810-28302829 None:intergenic 25.0%
!! TTATTGTTTCTTGGGATATA+AGG - chr1_1:28302894-28302913 None:intergenic 25.0%
! ATAAAATAATTCCAAAGGGT+TGG + chr1_1:28302910-28302929 Msa0017060:intron 25.0%
!!! AGTGAAACTTTTAGCTTAAA+TGG + chr1_1:28302965-28302984 Msa0017060:intron 25.0%
!!! TTTTAGCTTAAATGGATAGT+TGG + chr1_1:28302973-28302992 Msa0017060:intron 25.0%
! GTACTATTAAAATATTCACG+GGG + chr1_1:28303987-28304006 Msa0017060:intron 25.0%
! AACAGACAACATATAGTATT+CGG - chr1_1:28304120-28304139 None:intergenic 25.0%
!! CATTTTATCCTTCTTAACAT+CGG + chr1_1:28304169-28304188 Msa0017060:intron 25.0%
!!! TTTTTAGTCAAAACCTCTAT+AGG + chr1_1:28305179-28305198 Msa0017060:intron 25.0%
! TATGATATTAGAAGTTCCTA+AGG - chr1_1:28305271-28305290 None:intergenic 25.0%
! AATACATATAATCAGATCGA+CGG + chr1_1:28305346-28305365 Msa0017060:intron 25.0%
!!! TATCTTGATTTGTATTGTCA+AGG + chr1_1:28305446-28305465 Msa0017060:intron 25.0%
! TAGTTCAAACATACTAAAAC+AGG + chr1_1:28305974-28305993 Msa0017060:three_prime_UTR 25.0%
AAATCGAATGTAATCACATG+TGG + chr1_1:28288071-28288090 Msa0017060:intron 30.0%
! GAGGTAAATAATACTAGTCT+TGG + chr1_1:28288236-28288255 Msa0017060:intron 30.0%
GTAATCACATATGTTAGTGT+TGG + chr1_1:28288431-28288450 Msa0017060:intron 30.0%
TGAGACTTAAAGAAAACTGT+TGG + chr1_1:28288613-28288632 Msa0017060:intron 30.0%
!! AAGATCGATATTGCTTTTGT+AGG + chr1_1:28288689-28288708 Msa0017060:intron 30.0%
! TTTTAGGCCTCCAAAAAATT+GGG - chr1_1:28288821-28288840 None:intergenic 30.0%
AGTAACAAAAAACTGCGAAT+AGG - chr1_1:28288924-28288943 None:intergenic 30.0%
! AAATGTACCAACCATTTTCT+TGG + chr1_1:28288950-28288969 Msa0017060:CDS 30.0%
GTGATTAAGATGTTATGCTA+TGG + chr1_1:28289031-28289050 Msa0017060:intron 30.0%
TAGAATGCAAATGGTATACT+CGG + chr1_1:28289087-28289106 Msa0017060:intron 30.0%
!!! ATCCTTTGTTTTCTGTTAGA+TGG + chr1_1:28289116-28289135 Msa0017060:intron 30.0%
GTCCTCATTCTAAATTTAGA+AGG + chr1_1:28289159-28289178 Msa0017060:intron 30.0%
!!! GGAAAAATGCTCTAGTTTTT+CGG + chr1_1:28289180-28289199 Msa0017060:intron 30.0%
AAGATCTTTCTCACATATTG+TGG + chr1_1:28289412-28289431 Msa0017060:intron 30.0%
GTTCACAGAGGAAAAAATTA+AGG - chr1_1:28289455-28289474 None:intergenic 30.0%
!!! AATTTTTTCCTCTGTGAACA+TGG + chr1_1:28289456-28289475 Msa0017060:intron 30.0%
! CTTGAATACTCAAATTTGCT+TGG + chr1_1:28289619-28289638 Msa0017060:CDS 30.0%
ATTCTAACTTGAAGAATGGA+AGG + chr1_1:28289647-28289666 Msa0017060:CDS 30.0%
! CAGATTTTTGTGATCTTTCA+TGG - chr1_1:28289976-28289995 None:intergenic 30.0%
! TGTATTCTAGTTGAATATGC+GGG + chr1_1:28290422-28290441 Msa0017060:CDS 30.0%
! TTTTATATTAGTGCCCTGAT+TGG + chr1_1:28290568-28290587 Msa0017060:intron 30.0%
AAGAAATACTTGACAAAAGC+TGG - chr1_1:28290674-28290693 None:intergenic 30.0%
TGATGTTGATCTTTCGTTAA+TGG + chr1_1:28290768-28290787 Msa0017060:intron 30.0%
AACACTCAGAATATTGATCA+AGG - chr1_1:28290803-28290822 None:intergenic 30.0%
AATAAAACTGTGGTTCAATG+TGG + chr1_1:28290959-28290978 Msa0017060:intron 30.0%
! TTCTTTGGTTTCAGAATCTT+AGG + chr1_1:28291020-28291039 Msa0017060:intron 30.0%
TGAAAGATGCTATAAATGAC+AGG - chr1_1:28291166-28291185 None:intergenic 30.0%
! AACAAGGAGCTACTAATTTT+GGG - chr1_1:28291192-28291211 None:intergenic 30.0%
! AAACAAGGAGCTACTAATTT+TGG - chr1_1:28291193-28291212 None:intergenic 30.0%
ACAGCATAAATGCATAAACA+AGG - chr1_1:28291208-28291227 None:intergenic 30.0%
AGATATAAAACGACGTTTCT+TGG - chr1_1:28291329-28291348 None:intergenic 30.0%
!! AAGAAACGTCGTTTTATATC+TGG + chr1_1:28291328-28291347 Msa0017060:CDS 30.0%
!! AGAAACGTCGTTTTATATCT+GGG + chr1_1:28291329-28291348 Msa0017060:CDS 30.0%
AAGATGATCTAAAAGAGAGA+GGG - chr1_1:28291394-28291413 None:intergenic 30.0%
AAAGATGATCTAAAAGAGAG+AGG - chr1_1:28291395-28291414 None:intergenic 30.0%
CAATAAGTCCATATACATAG+GGG - chr1_1:28291544-28291563 None:intergenic 30.0%
CCAATAAGTCCATATACATA+GGG - chr1_1:28291545-28291564 None:intergenic 30.0%
CCTATGTATATGGACTTATT+GGG + chr1_1:28291543-28291562 Msa0017060:CDS 30.0%
CTATGTATATGGACTTATTG+GGG + chr1_1:28291544-28291563 Msa0017060:CDS 30.0%
!! ATTTCTCTTTAGGCTTTGTT+TGG + chr1_1:28291714-28291733 Msa0017060:intron 30.0%
GGAAAATGATTTAGAGAGTT+TGG + chr1_1:28291862-28291881 Msa0017060:intron 30.0%
AATTGATTACGGCTTAGATT+AGG - chr1_1:28291960-28291979 None:intergenic 30.0%
! TTTTCGACTTTACTATACGA+GGG - chr1_1:28292025-28292044 None:intergenic 30.0%
!! TTTTTCGACTTTACTATACG+AGG - chr1_1:28292026-28292045 None:intergenic 30.0%
ATTTGGAAGGATTTCTCATT+TGG + chr1_1:28292067-28292086 Msa0017060:intron 30.0%
CCCTAAAAAAGGATATATAG+AGG + chr1_1:28292109-28292128 Msa0017060:intron 30.0%
!!! CCCTCTATATATCCTTTTTT+AGG - chr1_1:28292113-28292132 None:intergenic 30.0%
GTCTAAAGATGTACTATCAA+TGG - chr1_1:28292277-28292296 None:intergenic 30.0%
AGTACATCTTTAGACTACAT+TGG + chr1_1:28292282-28292301 Msa0017060:intron 30.0%
ATGTATGCAGAAATAAGTGA+TGG - chr1_1:28292464-28292483 None:intergenic 30.0%
! TATTTCTGCATACATCTTTG+AGG + chr1_1:28292469-28292488 Msa0017060:CDS 30.0%
!! TCTAGATTTTTCTGTTTTGG+AGG + chr1_1:28292633-28292652 Msa0017060:intron 30.0%
CTTACATGTGTATTTCACTT+TGG + chr1_1:28293110-28293129 Msa0017060:intron 30.0%
!! TGTATTTCACTTTGGAACAT+AGG + chr1_1:28293118-28293137 Msa0017060:intron 30.0%
! TAAACATTGATTATGCTTGC+TGG + chr1_1:28293256-28293275 Msa0017060:intron 30.0%
GAATCCTTTACTCACAATAT+TGG - chr1_1:28293390-28293409 None:intergenic 30.0%
! AGCATGGAATGATTTTCAAT+AGG - chr1_1:28293428-28293447 None:intergenic 30.0%
AATAGAGCAGTGTGAATAAA+AGG - chr1_1:28293608-28293627 None:intergenic 30.0%
!! ACTTTTGTTTCCCTTAATTC+TGG + chr1_1:28293653-28293672 Msa0017060:intron 30.0%
TATTCATTGTTCATCTCAAC+TGG + chr1_1:28293786-28293805 Msa0017060:intron 30.0%
AAAAATAAGCAGAATAAGGG+AGG - chr1_1:28293839-28293858 None:intergenic 30.0%
TAATGCAATAAGAGGAACAA+GGG - chr1_1:28294035-28294054 None:intergenic 30.0%
ACATCATTGTCTGTTTACTT+TGG + chr1_1:28294129-28294148 Msa0017060:intron 30.0%
AGCTGAGATAAAATTTGAAC+TGG - chr1_1:28294263-28294282 None:intergenic 30.0%
!! AGCCCAATATTTTATTTCAG+AGG - chr1_1:28294504-28294523 None:intergenic 30.0%
!! CTTTCAAGTACATTTTTGAC+TGG + chr1_1:28294900-28294919 Msa0017060:intron 30.0%
AAATAGTTTCCTAGCTTAGT+AGG + chr1_1:28295100-28295119 Msa0017060:intron 30.0%
TTCAATATTTCATTGAGCTC+AGG - chr1_1:28295462-28295481 None:intergenic 30.0%
! AGGAAACAAAATCCAAGTTT+TGG - chr1_1:28295550-28295569 None:intergenic 30.0%
TTTCATATAAGCAAAGTGGA+AGG - chr1_1:28295570-28295589 None:intergenic 30.0%
TAAATATGATAAGGGGACTT+TGG - chr1_1:28295675-28295694 None:intergenic 30.0%
AAAGTCCCCTTATCATATTT+AGG + chr1_1:28295674-28295693 Msa0017060:intron 30.0%
TGTTGTTCAGTTTACAATTG+TGG + chr1_1:28295757-28295776 Msa0017060:intron 30.0%
AAGAACAAAGTTGTTGAACA+CGG - chr1_1:28295869-28295888 None:intergenic 30.0%
!!! GAAATTTAGGGTTTTAGACA+AGG + chr1_1:28296048-28296067 Msa0017060:intron 30.0%
CTCCTAATCCTAATTAAATC+AGG + chr1_1:28296168-28296187 Msa0017060:intron 30.0%
!! GTTTCTATTTATGTTTTGGG+GGG - chr1_1:28296406-28296425 None:intergenic 30.0%
ATCATGTTGTGTTAACTTTC+TGG - chr1_1:28296474-28296493 None:intergenic 30.0%
ATCTGAATATTGCATAACGA+AGG + chr1_1:28296499-28296518 Msa0017060:intron 30.0%
GTAAACTAAGATAAGCTCAA+TGG + chr1_1:28296789-28296808 Msa0017060:intron 30.0%
!! GACTGTTAAGAGTATTGATT+AGG - chr1_1:28296829-28296848 None:intergenic 30.0%
GATGAATCTTGATGTAGATA+AGG + chr1_1:28296900-28296919 Msa0017060:intron 30.0%
!! TTAGTTCTAGAATGTAGAAC+AGG + chr1_1:28297030-28297049 Msa0017060:intron 30.0%
!! TAGTTCTAGAATGTAGAACA+GGG + chr1_1:28297031-28297050 Msa0017060:intron 30.0%
AAGTTGTCACAGTAAATTTG+AGG + chr1_1:28297078-28297097 Msa0017060:intron 30.0%
AACTTTCAACTCTTGAAGAA+GGG + chr1_1:28297113-28297132 Msa0017060:intron 30.0%
TCTGGTGCTTGTATATATTT+GGG - chr1_1:28297252-28297271 None:intergenic 30.0%
ATCTGGTGCTTGTATATATT+TGG - chr1_1:28297253-28297272 None:intergenic 30.0%
TTAACAGAGTAGGAAATTTC+TGG + chr1_1:28297462-28297481 Msa0017060:intron 30.0%
!! TTCAAAGTTTGGTTCTAATC+AGG - chr1_1:28297550-28297569 None:intergenic 30.0%
AGCACTAAACTTTCAAAGTT+TGG - chr1_1:28297561-28297580 None:intergenic 30.0%
! AAACTTTGAAAGTTTAGTGC+TGG + chr1_1:28297560-28297579 Msa0017060:intron 30.0%
! TGCATTTTTCATGTTTGCTT+TGG + chr1_1:28297608-28297627 Msa0017060:intron 30.0%
! GGAACACTTGATTATTTTCT+TGG - chr1_1:28297705-28297724 None:intergenic 30.0%
! CATCTATTTGTTAGTGTATG+TGG - chr1_1:28297813-28297832 None:intergenic 30.0%
AGTTAGAAAGCCATTAAGAA+AGG + chr1_1:28298013-28298032 Msa0017060:intron 30.0%
ATTGATATCCAGTTGTTGAA+TGG + chr1_1:28298040-28298059 Msa0017060:intron 30.0%
! ATATGAGTGAGTAAAAGTGT+TGG + chr1_1:28298377-28298396 Msa0017060:intron 30.0%
!! AGATTGATTTTCTGAAGAAG+AGG + chr1_1:28298556-28298575 Msa0017060:intron 30.0%
!! GATTGATTTTCTGAAGAAGA+GGG + chr1_1:28298557-28298576 Msa0017060:intron 30.0%
ATACCAGTTTGTACAAAGTT+TGG + chr1_1:28298773-28298792 Msa0017060:intron 30.0%
TGTAATCAACATTTACCCTA+TGG + chr1_1:28298850-28298869 Msa0017060:intron 30.0%
GTAATCAACATTTACCCTAT+GGG + chr1_1:28298851-28298870 Msa0017060:intron 30.0%
GTTTACACCACAAGAAATTT+AGG + chr1_1:28299279-28299298 Msa0017060:intron 30.0%
CAACTAATTCATCACTAACT+TGG + chr1_1:28299410-28299429 Msa0017060:intron 30.0%
TAGTACTGTGATAGTATGTT+TGG - chr1_1:28299524-28299543 None:intergenic 30.0%
!!! TCTTTTTTTTTTCAGGTTGC+TGG + chr1_1:28299679-28299698 Msa0017060:intron 30.0%
AAGTAAGCACATCATTTATG+TGG - chr1_1:28299846-28299865 None:intergenic 30.0%
TATTGTCCCAAAAATCTTTC+AGG + chr1_1:28299981-28300000 Msa0017060:intron 30.0%
!! GCTTTTATTCTAGAAACTAC+AGG - chr1_1:28300024-28300043 None:intergenic 30.0%
GAATAAGATATTTCTCCCTT+AGG - chr1_1:28300069-28300088 None:intergenic 30.0%
TAAAGAAACACACCTTGATA+AGG - chr1_1:28300253-28300272 None:intergenic 30.0%
!!! CTAGAGTTTTGGAACTTTTA+AGG + chr1_1:28300397-28300416 Msa0017060:CDS 30.0%
!!! AGAGTTTTGGAACTTTTAAG+GGG + chr1_1:28300399-28300418 Msa0017060:CDS 30.0%
AAATAAAGCAGAAGCAACAA+AGG - chr1_1:28300527-28300546 None:intergenic 30.0%
!!! TTGCTTCTGCTTTATTTTTG+TGG + chr1_1:28300530-28300549 Msa0017060:intron 30.0%
!!! TTCTGCTTTATTTTTGTGGA+TGG + chr1_1:28300534-28300553 Msa0017060:intron 30.0%
AAAATCATCAATACACTGCA+CGG - chr1_1:28300567-28300586 None:intergenic 30.0%
! TGATTTTCACCTAATCTCTA+TGG + chr1_1:28300580-28300599 Msa0017060:intron 30.0%
CAATCAAATCCATAGAGATT+AGG - chr1_1:28300592-28300611 None:intergenic 30.0%
TTGATTGAAACATGCGTTTA+TGG + chr1_1:28300691-28300710 Msa0017060:intron 30.0%
TGATTGAAACATGCGTTTAT+GGG + chr1_1:28300692-28300711 Msa0017060:intron 30.0%
!!! AGCAGTGATAGTTTTATAGT+TGG + chr1_1:28300843-28300862 Msa0017060:intron 30.0%
GACCATCATAATATTCCTAA+AGG + chr1_1:28300865-28300884 Msa0017060:intron 30.0%
! AGCCTTTAGGAATATTATGA+TGG - chr1_1:28300870-28300889 None:intergenic 30.0%
CATTGCAAGTACAATAGTAT+TGG + chr1_1:28301157-28301176 Msa0017060:intron 30.0%
! TGGAAGTATGATTGAATTTG+TGG - chr1_1:28301263-28301282 None:intergenic 30.0%
!! TATTACACTGTGTTTTGAAC+TGG + chr1_1:28301357-28301376 Msa0017060:intron 30.0%
!! ATTACACTGTGTTTTGAACT+GGG + chr1_1:28301358-28301377 Msa0017060:intron 30.0%
!! GAAATCATCACTTTTCTCTT+TGG + chr1_1:28301412-28301431 Msa0017060:intron 30.0%
ATGCTTCCATTGAATATTCT+AGG + chr1_1:28301615-28301634 Msa0017060:intron 30.0%
TGCCTTTATTATGTAACCAA+TGG + chr1_1:28301747-28301766 Msa0017060:intron 30.0%
! GACCATTGGTTACATAATAA+AGG - chr1_1:28301752-28301771 None:intergenic 30.0%
GAAAAAGTTTAAATCCCCTA+GGG + chr1_1:28301814-28301833 Msa0017060:intron 30.0%
AAAAAGTTTAAATCCCCTAG+GGG + chr1_1:28301815-28301834 Msa0017060:intron 30.0%
GAATTCTATTTACCACACAA+AGG + chr1_1:28301935-28301954 Msa0017060:intron 30.0%
! CTTTTCCATCTGATGATATA+GGG + chr1_1:28301993-28302012 Msa0017060:intron 30.0%
CTACAATTCTTTACAGAAAG+AGG - chr1_1:28302105-28302124 None:intergenic 30.0%
! CTTCATCTTGCGATTTTTAT+CGG - chr1_1:28302367-28302386 None:intergenic 30.0%
GTGGTAAATCAAGTTTACTT+CGG + chr1_1:28302490-28302509 Msa0017060:CDS 30.0%
AGCATGATAGAGTCAAAATA+GGG - chr1_1:28302582-28302601 None:intergenic 30.0%
TAGCATGATAGAGTCAAAAT+AGG - chr1_1:28302583-28302602 None:intergenic 30.0%
TGATGACAAAAGTTCATTTC+AGG + chr1_1:28302629-28302648 Msa0017060:CDS 30.0%
CCCTTAAATTCATCTATAGT+TGG + chr1_1:28302674-28302693 Msa0017060:intron 30.0%
! GATTATCTGAAACTCCTAAT+AGG - chr1_1:28302854-28302873 None:intergenic 30.0%
AAGATCATATGCCTTAATTG+TGG - chr1_1:28302936-28302955 None:intergenic 30.0%
! TCACTAGCTTCTTACAAATA+TGG - chr1_1:28303034-28303053 None:intergenic 30.0%
! TAAAGTCCAGCATTTTATAG+CGG - chr1_1:28303208-28303227 None:intergenic 30.0%
TACTGAACATTGTTCATAGA+CGG + chr1_1:28303336-28303355 Msa0017060:intron 30.0%
GCTTAAGCTTATCAATTAAG+AGG + chr1_1:28303420-28303439 Msa0017060:intron 30.0%
AACCTAAGGATATAGAATAG+TGG - chr1_1:28303464-28303483 None:intergenic 30.0%
GAACATGTGTTTATAAGTGT+TGG + chr1_1:28303586-28303605 Msa0017060:intron 30.0%
!!! CACTCGTAGAATTTTTAGTT+AGG - chr1_1:28303657-28303676 None:intergenic 30.0%
GTAACAAGAGAAAAAGAGTA+CGG + chr1_1:28303722-28303741 Msa0017060:intron 30.0%
CTGATATGGTGATATTAGAA+GGG - chr1_1:28303914-28303933 None:intergenic 30.0%
TCTGATATGGTGATATTAGA+AGG - chr1_1:28303915-28303934 None:intergenic 30.0%
ACTATAACAGAGGAATGAAA+AGG - chr1_1:28303952-28303971 None:intergenic 30.0%
TATTAAAATATTCACGGGGA+AGG + chr1_1:28303991-28304010 Msa0017060:intron 30.0%
ATTAAAATATTCACGGGGAA+GGG + chr1_1:28303992-28304011 Msa0017060:intron 30.0%
!! AATAGTTGTCTGTTGCTTTA+TGG + chr1_1:28304088-28304107 Msa0017060:intron 30.0%
ACAGACAACATATAGTATTC+GGG - chr1_1:28304119-28304138 None:intergenic 30.0%
ATATTTCATCAACAAGCACA+AGG - chr1_1:28304251-28304270 None:intergenic 30.0%
ATTGAAACTCTTGATAGAAG+TGG + chr1_1:28304318-28304337 Msa0017060:CDS 30.0%
GAATTGTCTAGTTACATCAA+TGG + chr1_1:28304615-28304634 Msa0017060:CDS 30.0%
! CATTCCGAAAAGTTTTTATC+AGG + chr1_1:28304660-28304679 Msa0017060:CDS 30.0%
TCCAATTGAAGTTTCACATA+AGG + chr1_1:28304713-28304732 Msa0017060:CDS 30.0%
TCCTTATGTGAAACTTCAAT+TGG - chr1_1:28304717-28304736 None:intergenic 30.0%
AATTGAAGTTTCACATAAGG+AGG + chr1_1:28304716-28304735 Msa0017060:CDS 30.0%
! ATTTTATAGCAGAACTCCAA+AGG + chr1_1:28304769-28304788 Msa0017060:CDS 30.0%
CCTATATAGAGTTTCTTATC+TGG - chr1_1:28304903-28304922 None:intergenic 30.0%
CCAGATAAGAAACTCTATAT+AGG + chr1_1:28304900-28304919 Msa0017060:CDS 30.0%
TAAGAAACTCTATATAGGAG+AGG + chr1_1:28304905-28304924 Msa0017060:CDS 30.0%
ACTTCACTTACCTATGTTAA+AGG + chr1_1:28304986-28305005 Msa0017060:intron 30.0%
CTTCACTTACCTATGTTAAA+GGG + chr1_1:28304987-28305006 Msa0017060:intron 30.0%
ACTTCAGATTTGTAAACCTT+AGG + chr1_1:28305252-28305271 Msa0017060:intron 30.0%
! TGATTTATACTACGCCTTTT+TGG + chr1_1:28305479-28305498 Msa0017060:intron 30.0%
TGATTAGCAGAGTTTCTATT+TGG - chr1_1:28305653-28305672 None:intergenic 30.0%
!!! ACTCAGAATATTATTTTGGC+CGG + chr1_1:28305788-28305807 Msa0017060:three_prime_UTR 30.0%
! TTTTTACCAAGAATGATCTG+TGG - chr1_1:28306027-28306046 None:intergenic 30.0%
AGAATTCCGGAAAAGAGAAA+GGG - chr1_1:28287603-28287622 None:intergenic 35.0%
! ATTGAACAGCGTTGAATGTA+GGG + chr1_1:28287765-28287784 Msa0017060:intron 35.0%
TGTAGTGTCAAACACATACA+CGG + chr1_1:28288097-28288116 Msa0017060:intron 35.0%
! CATATGTTAGTGTTGGACAT+TGG + chr1_1:28288438-28288457 Msa0017060:intron 35.0%
!! AGCTACAGCAATTTTGACAA+AGG - chr1_1:28288511-28288530 None:intergenic 35.0%
TTAGTGCATGCTTAGATTGA+CGG - chr1_1:28288559-28288578 None:intergenic 35.0%
!! ATTGCTTTTGTAGGCTACTA+TGG + chr1_1:28288698-28288717 Msa0017060:intron 35.0%
!! TTGCTTTTGTAGGCTACTAT+GGG + chr1_1:28288699-28288718 Msa0017060:intron 35.0%
TTTAGGCCTCCAAAAAATTG+GGG - chr1_1:28288820-28288839 None:intergenic 35.0%
!! GTTTTAGGCCTCCAAAAAAT+TGG - chr1_1:28288822-28288841 None:intergenic 35.0%
CAAATACACATACGGTAAGT+TGG - chr1_1:28289060-28289079 None:intergenic 35.0%
TGCCATCTAACAGAAAACAA+AGG - chr1_1:28289121-28289140 None:intergenic 35.0%
! TTGTTTTCTGTTAGATGGCA+TGG + chr1_1:28289121-28289140 Msa0017060:intron 35.0%
! TGTTTTCTGTTAGATGGCAT+GGG + chr1_1:28289122-28289141 Msa0017060:intron 35.0%
! TTTAGAATGAGGACTTCACA+TGG - chr1_1:28289153-28289172 None:intergenic 35.0%
TTAAAGACCGGAAAGTTTCA+AGG + chr1_1:28289335-28289354 Msa0017060:intron 35.0%
TAAAGACCGGAAAGTTTCAA+GGG + chr1_1:28289336-28289355 Msa0017060:intron 35.0%
ATCTTTCTCACATATTGTGG+TGG + chr1_1:28289415-28289434 Msa0017060:intron 35.0%
AATAATAGCCATGTTCACAG+AGG - chr1_1:28289467-28289486 None:intergenic 35.0%
CTTGTTTCCTTTCCAAACTA+TGG + chr1_1:28289545-28289564 Msa0017060:CDS 35.0%
GTGTAAATGGCTAACAATGA+AGG - chr1_1:28289942-28289961 None:intergenic 35.0%
TCATTGTTAGCCATTTACAC+CGG + chr1_1:28289942-28289961 Msa0017060:intron 35.0%
ATCTTTCATGGAACAATAGC+CGG - chr1_1:28289964-28289983 None:intergenic 35.0%
CATCAAAATAGAGGAGACAA+GGG - chr1_1:28290003-28290022 None:intergenic 35.0%
!! TTTTTGTTTGTGCAGTCTGA+AGG + chr1_1:28290060-28290079 Msa0017060:intron 35.0%
CTAACCAAACTCTCATCAAA+TGG - chr1_1:28290209-28290228 None:intergenic 35.0%
CATTTGATGAGAGTTTGGTT+AGG + chr1_1:28290207-28290226 Msa0017060:intron 35.0%
AGTTAGCTCGAGAATTATCA+TGG - chr1_1:28290315-28290334 None:intergenic 35.0%
GAGACTTCTATGAAACTCTT+GGG + chr1_1:28290390-28290409 Msa0017060:CDS 35.0%
AAAATGCCAATACCACAACA+GGG - chr1_1:28290499-28290518 None:intergenic 35.0%
AAAAATGCCAATACCACAAC+AGG - chr1_1:28290500-28290519 None:intergenic 35.0%
GCATAACCATTAACCAATCA+GGG - chr1_1:28290584-28290603 None:intergenic 35.0%
AGCATAACCATTAACCAATC+AGG - chr1_1:28290585-28290604 None:intergenic 35.0%
GAGCATGCCAAAAGAAAATA+TGG + chr1_1:28290647-28290666 Msa0017060:intron 35.0%
! AGCTGGACCATATTTTCTTT+TGG - chr1_1:28290657-28290676 None:intergenic 35.0%
ATTCTGCTGATGTGAGATTT+GGG + chr1_1:28290824-28290843 Msa0017060:intron 35.0%
GAAACCAAAGAAAACACCAA+AGG - chr1_1:28291012-28291031 None:intergenic 35.0%
TCAGAATCTTAGGCAAACTT+TGG + chr1_1:28291030-28291049 Msa0017060:intron 35.0%
TTTGTCTTGACAGTGTATTG+TGG + chr1_1:28291273-28291292 Msa0017060:intron 35.0%
CCCTATGTATATGGACTTAT+TGG + chr1_1:28291542-28291561 Msa0017060:CDS 35.0%
CCCAATAAGTCCATATACAT+AGG - chr1_1:28291546-28291565 None:intergenic 35.0%
TGGTCACTTCATTTCTCTTT+AGG + chr1_1:28291704-28291723 Msa0017060:intron 35.0%
!! TTAGGCTTTGTTTGGAAGAT+AGG + chr1_1:28291722-28291741 Msa0017060:intron 35.0%
TTTGGAAGATAGGAGAGAAA+GGG + chr1_1:28291732-28291751 Msa0017060:intron 35.0%
TAGGAGAACGTTTAACAAAG+AGG + chr1_1:28291841-28291860 Msa0017060:intron 35.0%
TTAGATTAGGAGAAAAAGGG+AGG - chr1_1:28291947-28291966 None:intergenic 35.0%
GGCTTAGATTAGGAGAAAAA+GGG - chr1_1:28291950-28291969 None:intergenic 35.0%
TATACGAGGGTCATCAAAAT+GGG - chr1_1:28292012-28292031 None:intergenic 35.0%
ATCCTTCCAAATTGCAACAT+TGG - chr1_1:28292059-28292078 None:intergenic 35.0%
GAAAAAGCTCACCCTAAAAA+AGG + chr1_1:28292098-28292117 Msa0017060:intron 35.0%
GTTCTGTAGTTTAACTAGCT+TGG + chr1_1:28292708-28292727 Msa0017060:intron 35.0%
! TCTCTGAATGATTGATTTCC+TGG + chr1_1:28292801-28292820 Msa0017060:intron 35.0%
! CTCTGAATGATTGATTTCCT+GGG + chr1_1:28292802-28292821 Msa0017060:intron 35.0%
TCTCCTCTCAAACACATTTA+TGG + chr1_1:28292842-28292861 Msa0017060:intron 35.0%
ATGCCATAAATGTGTTTGAG+AGG - chr1_1:28292848-28292867 None:intergenic 35.0%
GTATTTGAGTAGCGTATTTC+AGG + chr1_1:28292895-28292914 Msa0017060:intron 35.0%
ATCAAACCATTCAGAATGTC+TGG - chr1_1:28292977-28292996 None:intergenic 35.0%
AGACATTCTGAATGGTTTGA+TGG + chr1_1:28292976-28292995 Msa0017060:CDS 35.0%
TGACCAAAAGATCAGAAACA+GGG - chr1_1:28293005-28293024 None:intergenic 35.0%
TTGACCAAAAGATCAGAAAC+AGG - chr1_1:28293006-28293025 None:intergenic 35.0%
!! TGTTTCTGATCTTTTGGTCA+AGG + chr1_1:28293005-28293024 Msa0017060:CDS 35.0%
!! TCACTTTGGAACATAGGTAA+AGG + chr1_1:28293124-28293143 Msa0017060:intron 35.0%
GTAGATGTTCCAAGAGTTAA+AGG - chr1_1:28293218-28293237 None:intergenic 35.0%
CTTGGAACATCTACTCAAAT+TGG + chr1_1:28293224-28293243 Msa0017060:CDS 35.0%
GAACATCTACTCAAATTGGT+TGG + chr1_1:28293228-28293247 Msa0017060:intron 35.0%
TGGAATACCTTCTTTGTTGA+AGG + chr1_1:28293335-28293354 Msa0017060:CDS 35.0%
AGTAAGACCTTCAACAAAGA+AGG - chr1_1:28293345-28293364 None:intergenic 35.0%
CCAAATGTCAATAACTAGCA+TGG - chr1_1:28293444-28293463 None:intergenic 35.0%
CCATGCTAGTTATTGACATT+TGG + chr1_1:28293441-28293460 Msa0017060:intron 35.0%
ACCAAGTTTATCCTAGTTGT+TGG + chr1_1:28293680-28293699 Msa0017060:intron 35.0%
TCCAACAACTAGGATAAACT+TGG - chr1_1:28293684-28293703 None:intergenic 35.0%
TTTATCCTAGTTGTTGGATG+TGG + chr1_1:28293686-28293705 Msa0017060:intron 35.0%
TTATCCTAGTTGTTGGATGT+GGG + chr1_1:28293687-28293706 Msa0017060:intron 35.0%
GTAATGCAATAAGAGGAACA+AGG - chr1_1:28294036-28294055 None:intergenic 35.0%
!! TTTGGTTCTCAGGTATGTTA+GGG + chr1_1:28294147-28294166 Msa0017060:intron 35.0%
ATGCAATCTCATAAGAAGGA+GGG - chr1_1:28294186-28294205 None:intergenic 35.0%
TTGGATGCAATCTCATAAGA+AGG - chr1_1:28294190-28294209 None:intergenic 35.0%
GAGATTGCATCCAAAATTCA+AGG + chr1_1:28294196-28294215 Msa0017060:CDS 35.0%
!! CATTTCCTTCTGCTTTTGTT+TGG + chr1_1:28294342-28294361 Msa0017060:intron 35.0%
GAAGAAACACACGTAAATTC+CGG - chr1_1:28294409-28294428 None:intergenic 35.0%
AGGAAATAGAATCATGCATC+AGG - chr1_1:28294484-28294503 None:intergenic 35.0%
TGAAAGTTCTTACTCGATGT+TGG - chr1_1:28294886-28294905 None:intergenic 35.0%
!! GAAAAGGTATTTCAGCTAAC+CGG + chr1_1:28294949-28294968 Msa0017060:intron 35.0%
! TTTCGTTTTCTCTCATCTTC+CGG - chr1_1:28294971-28294990 None:intergenic 35.0%
CGCAGTATTAAAAACCAAAC+TGG - chr1_1:28295242-28295261 None:intergenic 35.0%
AAAATAGCGACGAGTTAAAC+AGG - chr1_1:28295339-28295358 None:intergenic 35.0%
AGATTGCTAAGCTACTTGAA+TGG + chr1_1:28295364-28295383 Msa0017060:intron 35.0%
!! AGACATTGACTTCAAAACCT+TGG + chr1_1:28295518-28295537 Msa0017060:CDS 35.0%
GTTTACAATTGTGGTGTTTG+AGG + chr1_1:28295766-28295785 Msa0017060:intron 35.0%
ATAAAAGGAATTGGGCAAGA+GGG - chr1_1:28295896-28295915 None:intergenic 35.0%
TATAAAAGGAATTGGGCAAG+AGG - chr1_1:28295897-28295916 None:intergenic 35.0%
! TAAATAGTTATGGGGGTGTA+TGG + chr1_1:28295995-28296014 Msa0017060:intron 35.0%
!!! GGGTTTTAGACAAGGAATAA+AGG + chr1_1:28296056-28296075 Msa0017060:intron 35.0%
TTTAATTAGGATTAGGAGCC+TGG - chr1_1:28296166-28296185 None:intergenic 35.0%
! CTCTTAAAGATCAGTGGATT+AGG - chr1_1:28296228-28296247 None:intergenic 35.0%
GATTGTCTCTTAAAGATCAG+TGG - chr1_1:28296234-28296253 None:intergenic 35.0%
GCTTTAACCTTTCACTTGAA+GGG - chr1_1:28296325-28296344 None:intergenic 35.0%
! ACGAAGGAAGAAAAGTCTTT+TGG + chr1_1:28296515-28296534 Msa0017060:intron 35.0%
CTATCAAGGTTTAACAATGG+AGG - chr1_1:28296586-28296605 None:intergenic 35.0%
CCTCTATCAAGGTTTAACAA+TGG - chr1_1:28296589-28296608 None:intergenic 35.0%
CCATTGTTAAACCTTGATAG+AGG + chr1_1:28296586-28296605 Msa0017060:intron 35.0%
TTCTGTTACAACCTCTATCA+AGG - chr1_1:28296600-28296619 None:intergenic 35.0%
!! AGTTCTGAACAAAACTCTTG+TGG - chr1_1:28296974-28296993 None:intergenic 35.0%
!! ACATTCTAGAACTAAGCACA+TGG - chr1_1:28297025-28297044 None:intergenic 35.0%
GAACTTTCAACTCTTGAAGA+AGG + chr1_1:28297112-28297131 Msa0017060:intron 35.0%
TAAAAGGGAACCATCAATCA+TGG - chr1_1:28297372-28297391 None:intergenic 35.0%
ACAGACCTTATTAACAGAGT+AGG + chr1_1:28297452-28297471 Msa0017060:intron 35.0%
!! GGAAATTTCTGGTCTTGTAA+TGG + chr1_1:28297473-28297492 Msa0017060:intron 35.0%
!! AATTTCTGGTCTTGTAATGG+TGG + chr1_1:28297476-28297495 Msa0017060:intron 35.0%
TTGTAATGGTGGCATATTGA+AGG + chr1_1:28297487-28297506 Msa0017060:intron 35.0%
TGTAATGGTGGCATATTGAA+GGG + chr1_1:28297488-28297507 Msa0017060:intron 35.0%
AAAAGCTGTGATTCAGAATC+TGG - chr1_1:28297766-28297785 None:intergenic 35.0%
GTATGCATAGTAAACAGAGA+GGG + chr1_1:28297845-28297864 Msa0017060:intron 35.0%
TATGCATAGTAAACAGAGAG+GGG + chr1_1:28297846-28297865 Msa0017060:intron 35.0%
TAATGGCTTTCTAACTGAAG+AGG - chr1_1:28298009-28298028 None:intergenic 35.0%
TTTGGCTGTCACTAAGAAAT+GGG - chr1_1:28298066-28298085 None:intergenic 35.0%
TGTGAGAACTATTCTCACTT+TGG - chr1_1:28298084-28298103 None:intergenic 35.0%
TGTAGTCAAATCCATGTTGT+TGG + chr1_1:28298138-28298157 Msa0017060:intron 35.0%
! AAAGGTTTTCACCAACAACA+TGG - chr1_1:28298152-28298171 None:intergenic 35.0%
! ATGTTGTTGGTGAAAACCTT+TGG + chr1_1:28298151-28298170 Msa0017060:intron 35.0%
GAATCAAGCAAAATCCTGAT+GGG - chr1_1:28298208-28298227 None:intergenic 35.0%
AGAATCAAGCAAAATCCTGA+TGG - chr1_1:28298209-28298228 None:intergenic 35.0%
TATGTTCAGGAAGAGATACA+AGG + chr1_1:28298258-28298277 Msa0017060:intron 35.0%
ATGTTCAGGAAGAGATACAA+GGG + chr1_1:28298259-28298278 Msa0017060:intron 35.0%
TTGCATTGCTTGCTTATAAC+TGG + chr1_1:28298346-28298365 Msa0017060:intron 35.0%
TGGTCATAGTGTGAGTATTA+TGG + chr1_1:28298438-28298457 Msa0017060:intron 35.0%
GGTCATAGTGTGAGTATTAT+GGG + chr1_1:28298439-28298458 Msa0017060:intron 35.0%
GTCATAGTGTGAGTATTATG+GGG + chr1_1:28298440-28298459 Msa0017060:intron 35.0%
AATAGGGAGAGGATTTAGAA+TGG + chr1_1:28298592-28298611 Msa0017060:intron 35.0%
! ATAGGGAGAGGATTTAGAAT+GGG + chr1_1:28298593-28298612 Msa0017060:intron 35.0%
ATGCCAAACTTTGTACAAAC+TGG - chr1_1:28298779-28298798 None:intergenic 35.0%
AAAGTTTGGCATAGCAAACT+TGG + chr1_1:28298787-28298806 Msa0017060:intron 35.0%
GGAGGTTTCTACTTCTAATA+TGG - chr1_1:28296568-28296587 None:intergenic 35.0%
CTATCAAGGTTTAACAATGG+AGG - chr1_1:28296586-28296605 None:intergenic 35.0%
CCTCTATCAAGGTTTAACAA+TGG - chr1_1:28296589-28296608 None:intergenic 35.0%
CCATTGTTAAACCTTGATAG+AGG + chr1_1:28296586-28296605 Msa0017060:intron 35.0%
TTCTGTTACAACCTCTATCA+AGG - chr1_1:28296600-28296619 None:intergenic 35.0%
ATTCTTGTTCTTCGTGGATT+TGG - chr1_1:28299254-28299273 None:intergenic 35.0%
CTTTGAATTCTTGTTCTTCG+TGG - chr1_1:28299260-28299279 None:intergenic 35.0%
TTAGTTGTGAGTCATACCAA+TGG - chr1_1:28299397-28299416 None:intergenic 35.0%
AACCAGGTCAAACTTAATCT+AGG + chr1_1:28299488-28299507 Msa0017060:intron 35.0%
ATCCTAGATTAAGTTTGACC+TGG - chr1_1:28299493-28299512 None:intergenic 35.0%
TTCTTCAGTCATTTCATTCC+TGG + chr1_1:28299605-28299624 Msa0017060:intron 35.0%
TTGAGGCAGATAAATTAACC+AGG - chr1_1:28299626-28299645 None:intergenic 35.0%
TTACATTCCAATGCAACTTG+AGG - chr1_1:28299643-28299662 None:intergenic 35.0%
TTGAGAATATGGAGTCTGTA+TGG + chr1_1:28299800-28299819 Msa0017060:CDS 35.0%
AATATGGAGTCTGTATGGAA+AGG + chr1_1:28299805-28299824 Msa0017060:CDS 35.0%
!! CTTAACTTGCAAACAGCTAT+AGG - chr1_1:28299929-28299948 None:intergenic 35.0%
! CAGTGACCTGAAAGATTTTT+GGG - chr1_1:28299990-28300009 None:intergenic 35.0%
! TCAGTGACCTGAAAGATTTT+TGG - chr1_1:28299991-28300010 None:intergenic 35.0%
AGGGAGAAATATCTTATTCC+CGG + chr1_1:28300070-28300089 Msa0017060:CDS 35.0%
!! TTTAATTTGTTCCTCTCCAG+GGG - chr1_1:28300154-28300173 None:intergenic 35.0%
!! GTTTAATTTGTTCCTCTCCA+GGG - chr1_1:28300155-28300174 None:intergenic 35.0%
!! TGTTTAATTTGTTCCTCTCC+AGG - chr1_1:28300156-28300175 None:intergenic 35.0%
! GATTCTAAAGGTAGAAAGGT+AGG + chr1_1:28300192-28300211 Msa0017060:CDS 35.0%
! TTTGGTAATCACAAGCAATG+TGG - chr1_1:28300472-28300491 None:intergenic 35.0%
ACAAATGGAGCAATGTACTA+TGG - chr1_1:28300774-28300793 None:intergenic 35.0%
! TTTCTAGAAGCTAAGAAAGG+AGG - chr1_1:28300986-28301005 None:intergenic 35.0%
! AGGTTTCTAGAAGCTAAGAA+AGG - chr1_1:28300989-28301008 None:intergenic 35.0%
GCATTAGTGGTCAAATTTCT+TGG + chr1_1:28301201-28301220 Msa0017060:intron 35.0%
!! TTACACTGTGTTTTGAACTG+GGG + chr1_1:28301359-28301378 Msa0017060:intron 35.0%
!! TTCTGGGATTCTACTAATGT+AGG - chr1_1:28301511-28301530 None:intergenic 35.0%
ATATACTACCTCAAGCTTCT+GGG - chr1_1:28301527-28301546 None:intergenic 35.0%
TATATACTACCTCAAGCTTC+TGG - chr1_1:28301528-28301547 None:intergenic 35.0%
CATACATCGCAGGAATAAAA+CGG - chr1_1:28301682-28301701 None:intergenic 35.0%
TATATCTCATCATACATCGC+AGG - chr1_1:28301692-28301711 None:intergenic 35.0%
GGAAAAAGTTTAAATCCCCT+AGG + chr1_1:28301813-28301832 Msa0017060:intron 35.0%
!! AGTAGTGCTGAATTTGGTTT+TGG + chr1_1:28301887-28301906 Msa0017060:intron 35.0%
CAAACTATTGATCCTTTGTG+TGG - chr1_1:28301950-28301969 None:intergenic 35.0%
! CAAAGGATCAATAGTTTGCA+TGG + chr1_1:28301952-28301971 Msa0017060:intron 35.0%
! GCTTTTCCATCTGATGATAT+AGG + chr1_1:28301992-28302011 Msa0017060:intron 35.0%
! CTAAGTGTTTTCTTCCATGA+GGG + chr1_1:28302125-28302144 Msa0017060:intron 35.0%
! ATCTTGCGATTTTTATCGGA+TGG - chr1_1:28302363-28302382 None:intergenic 35.0%
AATCGCAAGATGAAGATAGT+TGG + chr1_1:28302372-28302391 Msa0017060:CDS 35.0%
!! TATTGGTTCAACATAGCAGA+AGG + chr1_1:28302405-28302424 Msa0017060:CDS 35.0%
TTTCTATTGACAGGACCAAA+TGG + chr1_1:28302465-28302484 Msa0017060:CDS 35.0%
AGAGTCAAAATAGGGAATCA+CGG - chr1_1:28302574-28302593 None:intergenic 35.0%
! AATGAACTTTTGTCATCAGC+TGG - chr1_1:28302627-28302646 None:intergenic 35.0%
!! GGCTTTATTTGGTCGATATA+TGG - chr1_1:28302789-28302808 None:intergenic 35.0%
! TCTGAAACTCCTAATAGGAT+TGG - chr1_1:28302849-28302868 None:intergenic 35.0%
CTAGCTTCTTACAAATATGG+TGG - chr1_1:28303031-28303050 None:intergenic 35.0%
! ATTTTGCCGCTATAAAATGC+TGG + chr1_1:28303199-28303218 Msa0017060:intron 35.0%
TGCCACTATTCTATATCCTT+AGG + chr1_1:28303459-28303478 Msa0017060:intron 35.0%
GAACAAGCTTGATAAACCTA+AGG - chr1_1:28303478-28303497 None:intergenic 35.0%
! TTTATCAAGCTTGTTCTCGT+AGG + chr1_1:28303482-28303501 Msa0017060:intron 35.0%
!! CATGTGTTTATAAGTGTTGG+AGG + chr1_1:28303589-28303608 Msa0017060:intron 35.0%
ATATGGTGATATTAGAAGGG+AGG - chr1_1:28303911-28303930 None:intergenic 35.0%
CAGACAACATATAGTATTCG+GGG - chr1_1:28304118-28304137 None:intergenic 35.0%
ACAGTGTTCTTGATGTTTAG+TGG - chr1_1:28304390-28304409 None:intergenic 35.0%
AACACTGTACACAAAGCAAT+GGG + chr1_1:28304402-28304421 Msa0017060:CDS 35.0%
ATGGACAAACAAAACCTACT+TGG + chr1_1:28304439-28304458 Msa0017060:CDS 35.0%
GATAAAGATCTTCAGCTCTT+TGG - chr1_1:28304542-28304561 None:intergenic 35.0%
ACTAGACAATTCTTCCTGTT+TGG - chr1_1:28304607-28304626 None:intergenic 35.0%
TTTATCAGGAATTTCTCACG+AGG + chr1_1:28304674-28304693 Msa0017060:CDS 35.0%
TTATCAGGAATTTCTCACGA+GGG + chr1_1:28304675-28304694 Msa0017060:CDS 35.0%
GGAGTTCTGCTATAAAATCT+TGG - chr1_1:28304767-28304786 None:intergenic 35.0%
AGTGTTTCTTAATTGGCACT+AGG + chr1_1:28304823-28304842 Msa0017060:CDS 35.0%
GTGTTTCTTAATTGGCACTA+GGG + chr1_1:28304824-28304843 Msa0017060:CDS 35.0%
AGTTTAATTGCCTGTTCTAG+GGG - chr1_1:28305107-28305126 None:intergenic 35.0%
CAGTTTAATTGCCTGTTCTA+GGG - chr1_1:28305108-28305127 None:intergenic 35.0%
! AATTGGTTCAGTACCTTGTT+GGG + chr1_1:28305139-28305158 Msa0017060:intron 35.0%
TAATTCACATAGATGCTGCT+TGG - chr1_1:28305218-28305237 None:intergenic 35.0%
ATCTCACTTGACAAGTCATT+TGG + chr1_1:28305303-28305322 Msa0017060:intron 35.0%
GACAAATAAAATGCAGGGAA+AGG - chr1_1:28305403-28305422 None:intergenic 35.0%
GTCGTGACAAATAAAATGCA+GGG - chr1_1:28305408-28305427 None:intergenic 35.0%
AGTCGTGACAAATAAAATGC+AGG - chr1_1:28305409-28305428 None:intergenic 35.0%
! TGATTGATTTCATGCTGTGA+TGG + chr1_1:28305515-28305534 Msa0017060:intron 35.0%
! TTCCTTTATTTCCTAGTTCC+AGG + chr1_1:28305612-28305631 Msa0017060:CDS 35.0%
TTCCTGGAACTAGGAAATAA+AGG - chr1_1:28305617-28305636 None:intergenic 35.0%
CATCAGCTATATTGCTTAAC+AGG - chr1_1:28305698-28305717 None:intergenic 35.0%
CTGTTAAGCAATATAGCTGA+TGG + chr1_1:28305696-28305715 Msa0017060:CDS 35.0%
ATATAGCTGATGGTAAGCAT+CGG + chr1_1:28305706-28305725 Msa0017060:CDS 35.0%
AAGTCATTAGCTGTATACAC+CGG - chr1_1:28305810-28305829 None:intergenic 35.0%
AGCTGCAATTATGTTCACAT+CGG + chr1_1:28305905-28305924 Msa0017060:three_prime_UTR 35.0%
! TTTGTGCTGTTGTTGTCTCT+TGG - chr1_1:28287413-28287432 None:intergenic 40.0%
!! TTGTTGAGTTGAGGTGAAGA+AGG - chr1_1:28287517-28287536 None:intergenic 40.0%
! TTCGTTCCCTTTCTCTTTTC+CGG + chr1_1:28287594-28287613 Msa0017060:CDS 40.0%
GAGAATTCCGGAAAAGAGAA+AGG - chr1_1:28287604-28287623 None:intergenic 40.0%
CTCTCTCTATCTCTTCTTTG+TGG + chr1_1:28287699-28287718 Msa0017060:intron 40.0%
! CATTGAACAGCGTTGAATGT+AGG + chr1_1:28287764-28287783 Msa0017060:intron 40.0%
GTAGTGTCAAACACATACAC+GGG + chr1_1:28288098-28288117 Msa0017060:intron 40.0%
CCACAAACACTTCTGATTGA+AGG - chr1_1:28288139-28288158 None:intergenic 40.0%
!! CCTTCAATCAGAAGTGTTTG+TGG + chr1_1:28288136-28288155 Msa0017060:intron 40.0%
TTCGTTTGTGTACTGTGTAG+AGG + chr1_1:28288269-28288288 Msa0017060:intron 40.0%
!! ATCAGAAGTGTCAGTGCTAT+AGG + chr1_1:28288472-28288491 Msa0017060:intron 40.0%
TCAAAATTGCTGTAGCTCAC+TGG + chr1_1:28288514-28288533 Msa0017060:intron 40.0%
CAAAATTGCTGTAGCTCACT+GGG + chr1_1:28288515-28288534 Msa0017060:intron 40.0%
! AAACTGTTGGAGAGACCTTT+TGG + chr1_1:28288626-28288645 Msa0017060:intron 40.0%
! TGCTTTTGTAGGCTACTATG+GGG + chr1_1:28288700-28288719 Msa0017060:intron 40.0%
! TAGCTACGAACCACGATTTT+AGG + chr1_1:28288761-28288780 Msa0017060:intron 40.0%
! AGCTACGAACCACGATTTTA+GGG + chr1_1:28288762-28288781 Msa0017060:intron 40.0%
GATTCAAACCCCTAAAATCG+TGG - chr1_1:28288774-28288793 None:intergenic 40.0%
CATGACTTTGAGCTCATTCT+AGG + chr1_1:28288896-28288915 Msa0017060:intron 40.0%
ACGATAGCCAAGAAAATGGT+TGG - chr1_1:28288960-28288979 None:intergenic 40.0%
ACGTACGATAGCCAAGAAAA+TGG - chr1_1:28288964-28288983 None:intergenic 40.0%
AAAGACCGGAAAGTTTCAAG+GGG + chr1_1:28289337-28289356 Msa0017060:intron 40.0%
ATCTGATACTCTGAGCTTCT+TGG - chr1_1:28289376-28289395 None:intergenic 40.0%
! TTCTCACATATTGTGGTGGA+AGG + chr1_1:28289419-28289438 Msa0017060:intron 40.0%
TTTCCTTTCCAAACTATGGC+AGG + chr1_1:28289549-28289568 Msa0017060:CDS 40.0%
CTCTTCGGCTTCATTCTTAA+TGG + chr1_1:28289774-28289793 Msa0017060:intron 40.0%
CCATCAAAATAGAGGAGACA+AGG - chr1_1:28290004-28290023 None:intergenic 40.0%
!! CCTTGTCTCCTCTATTTTGA+TGG + chr1_1:28290001-28290020 Msa0017060:intron 40.0%
! ACGTCAAGTTTTACTCTGCA+GGG + chr1_1:28290129-28290148 Msa0017060:CDS 40.0%
CACACCATTTGATGAGAGTT+TGG + chr1_1:28290202-28290221 Msa0017060:intron 40.0%
ATGAGAGTTTGGTTAGGCAT+TGG + chr1_1:28290213-28290232 Msa0017060:intron 40.0%
GGAGACTTCTATGAAACTCT+TGG + chr1_1:28290389-28290408 Msa0017060:CDS 40.0%
TATGCGGGTTTAAATCCCTT+TGG + chr1_1:28290437-28290456 Msa0017060:CDS 40.0%
! TTAGTGCCCTGATTGGTTAA+TGG + chr1_1:28290575-28290594 Msa0017060:intron 40.0%
CATTCTGCTGATGTGAGATT+TGG + chr1_1:28290823-28290842 Msa0017060:intron 40.0%
TTCTGCTGATGTGAGATTTG+GGG + chr1_1:28290825-28290844 Msa0017060:intron 40.0%
! TGTTACGTTTTGTGCACCAA+AGG + chr1_1:28290915-28290934 Msa0017060:intron 40.0%
!!! TGTGCCTTTGGTGTTTTCTT+TGG + chr1_1:28291005-28291024 Msa0017060:intron 40.0%
TTGGATGATCTTACACGCAA+TGG + chr1_1:28291049-28291068 Msa0017060:CDS 40.0%
TACACGCAATGGTTATTCAG+TGG + chr1_1:28291060-28291079 Msa0017060:CDS 40.0%
AAATGACAGGCAACAGAAGA+AGG - chr1_1:28291153-28291172 None:intergenic 40.0%
TGTATTGTGGAGGAAGTTCA+AGG + chr1_1:28291286-28291305 Msa0017060:CDS 40.0%
CAGTATTCTCCAATTGACAG+CGG + chr1_1:28291358-28291377 Msa0017060:intron 40.0%
ATGATCTAAAAGAGAGAGGG+AGG - chr1_1:28291391-28291410 None:intergenic 40.0%
TTCATACCTACTACAGGCAT+AGG - chr1_1:28291596-28291615 None:intergenic 40.0%
GTTTGGAAGATAGGAGAGAA+AGG + chr1_1:28291731-28291750 Msa0017060:intron 40.0%
TTAGGGGAGGGAAATGAATA+GGG + chr1_1:28291771-28291790 Msa0017060:intron 40.0%
AGAAAAAAGGGATGGAGGAA+GGG - chr1_1:28291913-28291932 None:intergenic 40.0%
GAGAAGGCTTGGAGAAAAAA+GGG - chr1_1:28291925-28291944 None:intergenic 40.0%
CGGCTTAGATTAGGAGAAAA+AGG - chr1_1:28291951-28291970 None:intergenic 40.0%
ATACGAGGGTCATCAAAATG+GGG - chr1_1:28292011-28292030 None:intergenic 40.0%
CTATACGAGGGTCATCAAAA+TGG - chr1_1:28292013-28292032 None:intergenic 40.0%
ATTGCAACATTGGCATGTCA+TGG - chr1_1:28292049-28292068 None:intergenic 40.0%
GACATGCCAATGTTGCAATT+TGG + chr1_1:28292050-28292069 Msa0017060:intron 40.0%
TGCCAATGTTGCAATTTGGA+AGG + chr1_1:28292054-28292073 Msa0017060:intron 40.0%
TACAATACATTTCTCCGCAC+TGG + chr1_1:28292182-28292201 Msa0017060:intron 40.0%
ATAACAGAACAAGACCAGTG+CGG - chr1_1:28292199-28292218 None:intergenic 40.0%
TAGGAATTTCTCATTCGGCA+AGG + chr1_1:28292337-28292356 Msa0017060:intron 40.0%
AGGAATTTCTCATTCGGCAA+GGG + chr1_1:28292338-28292357 Msa0017060:intron 40.0%
!! AAGGGGGTACTGCATAAATA+TGG + chr1_1:28292356-28292375 Msa0017060:CDS 40.0%
AATACGTCTTCATGGTCTCT+AGG - chr1_1:28292383-28292402 None:intergenic 40.0%
! TTCTGCATACATCTTTGAGG+AGG + chr1_1:28292472-28292491 Msa0017060:CDS 40.0%
! TCTTTGAGGAGGAATTCTTG+TGG + chr1_1:28292483-28292502 Msa0017060:CDS 40.0%
GTGACTTGATATGTAGCACA+TGG + chr1_1:28292571-28292590 Msa0017060:intron 40.0%
GAACTGTGTACTCTCTAACA+GGG - chr1_1:28292692-28292711 None:intergenic 40.0%
AGAACTGTGTACTCTCTAAC+AGG - chr1_1:28292693-28292712 None:intergenic 40.0%
TGATTTCCTGGGAAACACTA+CGG + chr1_1:28292813-28292832 Msa0017060:intron 40.0%
AATTATCCGTAGTGTTTCCC+AGG - chr1_1:28292822-28292841 None:intergenic 40.0%
TATTTCAGGAACGTCCAAGT+GGG + chr1_1:28292909-28292928 Msa0017060:intron 40.0%
GTAGTTCCAGACATTCTGAA+TGG + chr1_1:28292968-28292987 Msa0017060:CDS 40.0%
GTCAAGGTGTGATTCTAAAC+AGG + chr1_1:28293021-28293040 Msa0017060:intron 40.0%
ACATAGGTAAAGGAGCTCTA+TGG + chr1_1:28293134-28293153 Msa0017060:intron 40.0%
!! AAAGAAGGTATTCCATCCGT+TGG - chr1_1:28293330-28293349 None:intergenic 40.0%
! ATTGGTAATCCACTGCAATG+TGG - chr1_1:28293372-28293391 None:intergenic 40.0%
!! CTTGGTTCTGCCAGAATTAA+GGG - chr1_1:28293666-28293685 None:intergenic 40.0%
!! ACTTGGTTCTGCCAGAATTA+AGG - chr1_1:28293667-28293686 None:intergenic 40.0%
!! GTCTGTTTACTTTGGTTCTC+AGG + chr1_1:28294137-28294156 Msa0017060:intron 40.0%
!! CTTTGGTTCTCAGGTATGTT+AGG + chr1_1:28294146-28294165 Msa0017060:intron 40.0%
GATGCAATCTCATAAGAAGG+AGG - chr1_1:28294187-28294206 None:intergenic 40.0%
CAGTGTAACATGCTCAATTC+CGG + chr1_1:28294387-28294406 Msa0017060:CDS 40.0%
TACGTGTGTTTCTTCAGCAA+AGG + chr1_1:28294414-28294433 Msa0017060:CDS 40.0%
GTACCTCTACATGACTTGAA+TGG + chr1_1:28294810-28294829 Msa0017060:intron 40.0%
CATCCATTCAAGTCATGTAG+AGG - chr1_1:28294816-28294835 None:intergenic 40.0%
ACTTGAATGGATGTCCAACA+GGG + chr1_1:28294823-28294842 Msa0017060:intron 40.0%
TGTTGGAAAACTTATGCAGG+TGG - chr1_1:28294869-28294888 None:intergenic 40.0%
CGATGTTGGAAAACTTATGC+AGG - chr1_1:28294872-28294891 None:intergenic 40.0%
TGACATGTACCTACTAAGCT+AGG - chr1_1:28295112-28295131 None:intergenic 40.0%
TGCTAAGCTACTTGAATGGA+AGG + chr1_1:28295368-28295387 Msa0017060:CDS 40.0%
TAAGCTACTTGAATGGAAGG+AGG + chr1_1:28295371-28295390 Msa0017060:CDS 40.0%
AACATTTAATTCGTCCCACG+TGG + chr1_1:28295481-28295500 Msa0017060:CDS 40.0%
ACATTTAATTCGTCCCACGT+GGG + chr1_1:28295482-28295501 Msa0017060:CDS 40.0%
TCGACAAATGCACATCTAAG+CGG - chr1_1:28295611-28295630 None:intergenic 40.0%
AGTCAAATTGCATTGCGTGT+TGG + chr1_1:28295710-28295729 Msa0017060:intron 40.0%
! ACAATTGTGGTGTTTGAGGT+AGG + chr1_1:28295770-28295789 Msa0017060:intron 40.0%
AACAATGCCCTTCAAGTGAA+AGG + chr1_1:28296315-28296334 Msa0017060:intron 40.0%
CGCTTTAACCTTTCACTTGA+AGG - chr1_1:28296326-28296345 None:intergenic 40.0%
AAAGATAGAGAGAGAGAGAG+AGG + chr1_1:28296638-28296657 Msa0017060:intron 40.0%
!! GACACATGTCACTGACTTAT+AGG + chr1_1:28296749-28296768 Msa0017060:intron 40.0%
TGATAACACCCTCAGTTTGA+GGG - chr1_1:28296854-28296873 None:intergenic 40.0%
! TTGATAACACCCTCAGTTTG+AGG - chr1_1:28296855-28296874 None:intergenic 40.0%
!! ACACTCTGAGTTTGTTTCTG+AGG + chr1_1:28296875-28296894 Msa0017060:intron 40.0%
TGTACCAGCTCATGATCAAT+GGG - chr1_1:28296944-28296963 None:intergenic 40.0%
ATGTACCAGCTCATGATCAA+TGG - chr1_1:28296945-28296964 None:intergenic 40.0%
TAAATTTGAGGAACCCTGCT+AGG + chr1_1:28297090-28297109 Msa0017060:intron 40.0%
AGAGTTGAAAGTTCCTAGCA+GGG - chr1_1:28297106-28297125 None:intergenic 40.0%
AAGAGTTGAAAGTTCCTAGC+AGG - chr1_1:28297107-28297126 None:intergenic 40.0%
! ACCAAATCTTGTTTCCTGGT+GGG - chr1_1:28297229-28297248 None:intergenic 40.0%
! TGGCTTTTGTGATGCAGATT+GGG - chr1_1:28297304-28297323 None:intergenic 40.0%
ACAAAAGCCAGTGATTGCAA+TGG + chr1_1:28297314-28297333 Msa0017060:intron 40.0%
CAAAAGCCAGTGATTGCAAT+GGG + chr1_1:28297315-28297334 Msa0017060:intron 40.0%
AATAGTCAGGCCATGATTGA+TGG + chr1_1:28297359-28297378 Msa0017060:intron 40.0%
CTTTCCAGTGATCTTCCAAA+GGG + chr1_1:28297415-28297434 Msa0017060:intron 40.0%
TCAATTCCTCTCTAACCCTT+TGG - chr1_1:28297433-28297452 None:intergenic 40.0%
!! ATATTGAAGGGCACCAACTA+TGG + chr1_1:28297500-28297519 Msa0017060:intron 40.0%
ACTTACTTCAGGTCCATAGT+TGG - chr1_1:28297516-28297535 None:intergenic 40.0%
! TGCATGATGCTACTTACTTC+AGG - chr1_1:28297527-28297546 None:intergenic 40.0%
AAATAGTATGGCCTCTCCTA+TGG - chr1_1:28297589-28297608 None:intergenic 40.0%
AGAAAGATGAAGTGAGCCAT+TGG + chr1_1:28297659-28297678 Msa0017060:intron 40.0%
GAAAGATGAAGTGAGCCATT+GGG + chr1_1:28297660-28297679 Msa0017060:intron 40.0%
TGTGGATGCATAATCATCAC+TGG - chr1_1:28297795-28297814 None:intergenic 40.0%
GGTATGCATAGTAAACAGAG+AGG + chr1_1:28297844-28297863 Msa0017060:intron 40.0%
!! AGGCTACTGTGCTTAGTTTT+GGG - chr1_1:28297892-28297911 None:intergenic 40.0%
! AGCTTTATATGGGCTAAAGC+AGG - chr1_1:28297922-28297941 None:intergenic 40.0%
TTGTCAGCAGATTCAAAACC+AGG + chr1_1:28297966-28297985 Msa0017060:intron 40.0%
CTTTGGCTGTCACTAAGAAA+TGG - chr1_1:28298067-28298086 None:intergenic 40.0%
AGAATAGTTCTCACAGTTGC+AGG + chr1_1:28298089-28298108 Msa0017060:intron 40.0%
!! TGGGAGCATCAACAAATACA+AGG - chr1_1:28298189-28298208 None:intergenic 40.0%
! TATTTGTTGATGCTCCCATC+AGG + chr1_1:28298191-28298210 Msa0017060:intron 40.0%
ATCTCTTCCTGAACATAGAC+AGG - chr1_1:28298255-28298274 None:intergenic 40.0%
CACTTATGCACAATCATACC+TGG - chr1_1:28298286-28298305 None:intergenic 40.0%
ATTGCTTGCTTATAACTGGC+AGG + chr1_1:28298350-28298369 Msa0017060:intron 40.0%
! ATGAGGAGGAGCATATTGTA+TGG + chr1_1:28298472-28298491 Msa0017060:intron 40.0%
! TGAGGAGGAGCATATTGTAT+GGG + chr1_1:28298473-28298492 Msa0017060:intron 40.0%
AAGAAGCAGTTTGACTGCTA+TGG + chr1_1:28298516-28298535 Msa0017060:intron 40.0%
AGGGAGACAGAGTAGTAATA+GGG + chr1_1:28298576-28298595 Msa0017060:intron 40.0%
! GAAGGAGTGACAAGATTTTG+AGG + chr1_1:28298668-28298687 Msa0017060:intron 40.0%
ACTGCTAACACTATTGCTAC+TGG - chr1_1:28298749-28298768 None:intergenic 40.0%
TATTTGAGAGCCTCATGATG+AGG - chr1_1:28298817-28298836 None:intergenic 40.0%
ATCAACATTTACCCTATGGG+AGG + chr1_1:28298854-28298873 Msa0017060:intron 40.0%
!! GACACATGTCACTGACTTAT+AGG + chr1_1:28296749-28296768 Msa0017060:intron 40.0%
GAGATAGTAGAAGTCACCAT+TGG + chr1_1:28299378-28299397 Msa0017060:intron 40.0%
! AACTTAATCTAGGATTGCCC+TGG + chr1_1:28299498-28299517 Msa0017060:intron 40.0%
TGTGATAGTATGTTTGGCCA+GGG - chr1_1:28299518-28299537 None:intergenic 40.0%
TAAAGCTGGAATTCTCTTGC+AGG + chr1_1:28299566-28299585 Msa0017060:intron 40.0%
! TTATCTGCCTCAAGTTGCAT+TGG + chr1_1:28299633-28299652 Msa0017060:intron 40.0%
TTCATCAGGAATAGCAGAGA+AGG - chr1_1:28299776-28299795 None:intergenic 40.0%
AAATGATGTGCTTACTTCCG+TGG + chr1_1:28299849-28299868 Msa0017060:CDS 40.0%
GAGGACTTGAATTTAGCAGT+AGG + chr1_1:28299883-28299902 Msa0017060:intron 40.0%
TCTCAACTTAGAGCTCCTAA+GGG + chr1_1:28300051-28300070 Msa0017060:CDS 40.0%
GGGAGAAATATCTTATTCCC+GGG + chr1_1:28300071-28300090 Msa0017060:CDS 40.0%
AATATCTTATTCCCGGGAAC+AGG + chr1_1:28300077-28300096 Msa0017060:CDS 40.0%
TAAAGGTAGAAAGGTAGGTG+AGG + chr1_1:28300197-28300216 Msa0017060:CDS 40.0%
AGAAACACACCTTGATAAGG+CGG - chr1_1:28300250-28300269 None:intergenic 40.0%
GTACCATGAAGCAAATGTCA+AGG + chr1_1:28300368-28300387 Msa0017060:CDS 40.0%
TTGCCTTGACATTTGCTTCA+TGG - chr1_1:28300374-28300393 None:intergenic 40.0%
! CAAGGCAAACACTAGAGTTT+TGG + chr1_1:28300386-28300405 Msa0017060:CDS 40.0%
CACATGAGCATATAACGCTT+TGG - chr1_1:28300490-28300509 None:intergenic 40.0%
AAGCGTTATATGCTCATGTG+AGG + chr1_1:28300490-28300509 Msa0017060:CDS 40.0%
! TAGAGGGCTTTTAAGCCTTT+AGG - chr1_1:28300883-28300902 None:intergenic 40.0%
GGTATTTATAGCCTCCTTGT+GGG - chr1_1:28301075-28301094 None:intergenic 40.0%
TGGTATTTATAGCCTCCTTG+TGG - chr1_1:28301076-28301095 None:intergenic 40.0%
AGGCTATAAATACCACCCTT+GGG + chr1_1:28301081-28301100 Msa0017060:intron 40.0%
TGGAGTGTGTATTGCATTAG+TGG + chr1_1:28301188-28301207 Msa0017060:intron 40.0%
TCATTGATGTCTTGCAGTGA+AGG + chr1_1:28301463-28301482 Msa0017060:intron 40.0%
CATTGATGTCTTGCAGTGAA+GGG + chr1_1:28301464-28301483 Msa0017060:intron 40.0%
TGAAGGGAGAAGAAGGAAAT+GGG + chr1_1:28301480-28301499 Msa0017060:CDS 40.0%
GGGAAATTGAATCACGACAT+AGG + chr1_1:28301566-28301585 Msa0017060:intron 40.0%
! ATAAAGGCACAAGAAGATGC+AGG - chr1_1:28301736-28301755 None:intergenic 40.0%
ACTACTTCAACTGTGACCAT+TGG - chr1_1:28301766-28301785 None:intergenic 40.0%
GTTTCATAGCTGACACTTCA+TGG - chr1_1:28301789-28301808 None:intergenic 40.0%
AAGTGTCAGCTATGAAACCA+CGG + chr1_1:28301791-28301810 Msa0017060:intron 40.0%
!! GGGATTTAAACTTTTTCCCG+TGG - chr1_1:28301811-28301830 None:intergenic 40.0%
! TCTGTCAGTAGTGCTGAATT+TGG + chr1_1:28301881-28301900 Msa0017060:intron 40.0%
CATCTCCCTATATCATCAGA+TGG - chr1_1:28302001-28302020 None:intergenic 40.0%
! GCTAAGTGTTTTCTTCCATG+AGG + chr1_1:28302124-28302143 Msa0017060:intron 40.0%
CTTTGTCAAACTGTAGTTGC+AGG + chr1_1:28302329-28302348 Msa0017060:intron 40.0%
TCAAACTGTAGTTGCAGGAT+GGG + chr1_1:28302334-28302353 Msa0017060:intron 40.0%
CTTGATTTACCACCACCATT+TGG - chr1_1:28302483-28302502 None:intergenic 40.0%
ACTTGGGATATGTGGACTTA+TGG + chr1_1:28302533-28302552 Msa0017060:CDS 40.0%
! GTTCATTTCAGGTCTGCTAT+TGG + chr1_1:28302640-28302659 Msa0017060:intron 40.0%
! CAGTACGAAGTATCTACCAT+CGG - chr1_1:28303321-28303340 None:intergenic 40.0%
ACATTGTTCATAGACGGAAG+AGG + chr1_1:28303342-28303361 Msa0017060:intron 40.0%
! CCTTACAAAACTAGCTTGTG+AGG - chr1_1:28303624-28303643 None:intergenic 40.0%
!!! CCTCACAAGCTAGTTTTGTA+AGG + chr1_1:28303621-28303640 Msa0017060:intron 40.0%
ATCACCATATCAGAAACAGC+AGG + chr1_1:28303921-28303940 Msa0017060:intron 40.0%
TCACCATATCAGAAACAGCA+GGG + chr1_1:28303922-28303941 Msa0017060:intron 40.0%
!! TATCCCTGCTGTTTCTGATA+TGG - chr1_1:28303928-28303947 None:intergenic 40.0%
TGTACAGCAGACTATAACAG+AGG - chr1_1:28303962-28303981 None:intergenic 40.0%
! TCCTTCTTAACATCGGTTAC+AGG + chr1_1:28304176-28304195 Msa0017060:intron 40.0%
ACCTGTAACCGATGTTAAGA+AGG - chr1_1:28304180-28304199 None:intergenic 40.0%
! TTCTTAACATCGGTTACAGG+TGG + chr1_1:28304179-28304198 Msa0017060:intron 40.0%
!! AGCAATGATGGATCGAAGTT+CGG - chr1_1:28304211-28304230 None:intergenic 40.0%
! CTTGTTGATGAAATATGCCG+AGG + chr1_1:28304255-28304274 Msa0017060:CDS 40.0%
TCTTGATAGAAGTGGCTGTT+TGG + chr1_1:28304326-28304345 Msa0017060:CDS 40.0%
CTTGATAGAAGTGGCTGTTT+GGG + chr1_1:28304327-28304346 Msa0017060:CDS 40.0%
TTGATAGAAGTGGCTGTTTG+GGG + chr1_1:28304328-28304347 Msa0017060:CDS 40.0%
GTTCTTGATGTTTAGTGGCA+AGG - chr1_1:28304385-28304404 None:intergenic 40.0%
GAACACTGTACACAAAGCAA+TGG + chr1_1:28304401-28304420 Msa0017060:CDS 40.0%
!!! TTGCTTTTGAAACTGCCAAG+AGG + chr1_1:28304493-28304512 Msa0017060:CDS 40.0%
!!! TGCTTTTGAAACTGCCAAGA+GGG + chr1_1:28304494-28304513 Msa0017060:CDS 40.0%
GCTCTTTGGATAACAATCTC+AGG - chr1_1:28304528-28304547 None:intergenic 40.0%
TGCAGAAAACTATGCCAAAC+AGG + chr1_1:28304590-28304609 Msa0017060:CDS 40.0%
! CTGATGCGATCTTTTTCCTT+TGG - chr1_1:28304788-28304807 None:intergenic 40.0%
TCTTAATTGGCACTAGGGAA+TGG + chr1_1:28304829-28304848 Msa0017060:CDS 40.0%
TTGAAGAGCCTATAGTCATC+GGG - chr1_1:28304860-28304879 None:intergenic 40.0%
CTTGAAGAGCCTATAGTCAT+CGG - chr1_1:28304861-28304880 None:intergenic 40.0%
CACTTACCTATGTTAAAGGG+TGG + chr1_1:28304990-28305009 Msa0017060:intron 40.0%
CAACAACCACCCTTTAACAT+AGG - chr1_1:28304999-28305018 None:intergenic 40.0%
CTATGTTAAAGGGTGGTTGT+TGG + chr1_1:28304997-28305016 Msa0017060:intron 40.0%
AATCCTAATACCCCTAGAAC+AGG + chr1_1:28305094-28305113 Msa0017060:intron 40.0%
CCAGTTTAATTGCCTGTTCT+AGG - chr1_1:28305109-28305128 None:intergenic 40.0%
CCTAGAACAGGCAATTAAAC+TGG + chr1_1:28305106-28305125 Msa0017060:intron 40.0%
GAACAGGCAATTAAACTGGT+AGG + chr1_1:28305110-28305129 Msa0017060:intron 40.0%
AAACTGGTAGGTACCAGAAT+TGG + chr1_1:28305122-28305141 Msa0017060:intron 40.0%
!! ACAAGGTACTGAACCAATTC+TGG - chr1_1:28305138-28305157 None:intergenic 40.0%
! GAATTGGTTCAGTACCTTGT+TGG + chr1_1:28305138-28305157 Msa0017060:intron 40.0%
TGTTATTAGGTGTCCCAACA+AGG - chr1_1:28305155-28305174 None:intergenic 40.0%
TAGCAGAGTTTCTATTTGGC+AGG - chr1_1:28305649-28305668 None:intergenic 40.0%
!!! GATGGTAAGCATCGGAATTT+TGG + chr1_1:28305714-28305733 Msa0017060:CDS 40.0%
ACAACAGCACAAACCACACT+CGG + chr1_1:28287420-28287439 Msa0017060:five_prime_UTR 45.0%
ACCTTAAGAACAGACACCGA+GGG - chr1_1:28287467-28287486 None:intergenic 45.0%
AACCTTAAGAACAGACACCG+AGG - chr1_1:28287468-28287487 None:intergenic 45.0%
TGAGGTGAAGAAGGAATGTG+TGG - chr1_1:28287508-28287527 None:intergenic 45.0%
AAGGAGGAGAAGGAGAATTC+CGG - chr1_1:28287616-28287635 None:intergenic 45.0%
ATGAAGGAAGAAGGAGGAGA+AGG - chr1_1:28287626-28287645 None:intergenic 45.0%
GTATACCTGAGGAAACGAGA+GGG - chr1_1:28287650-28287669 None:intergenic 45.0%
AGTATACCTGAGGAAACGAG+AGG - chr1_1:28287651-28287670 None:intergenic 45.0%
! AGAGAGAGAGAGTATACCTG+AGG - chr1_1:28287661-28287680 None:intergenic 45.0%
TACCGGTGTTTGTGTCATGT+CGG - chr1_1:28288383-28288402 None:intergenic 45.0%
GCTTAGATTGACGGTGAGTT+TGG - chr1_1:28288550-28288569 None:intergenic 45.0%
TCACTTGCTCACTCTTAGGT+TGG - chr1_1:28288596-28288615 None:intergenic 45.0%
AGTCTCACTTGCTCACTCTT+AGG - chr1_1:28288600-28288619 None:intergenic 45.0%
!!! TGGAGAGACCTTTTGGCTTT+AGG + chr1_1:28288633-28288652 Msa0017060:intron 45.0%
!!! ACCTTTTGGCTTTAGGTGAG+AGG + chr1_1:28288640-28288659 Msa0017060:intron 45.0%
TCCTCTCACCTAAAGCCAAA+AGG - chr1_1:28288644-28288663 None:intergenic 45.0%
! GCTACGAACCACGATTTTAG+GGG + chr1_1:28288763-28288782 Msa0017060:intron 45.0%
! TCCAAAAAATTGGGGTTGGC+CGG - chr1_1:28288812-28288831 None:intergenic 45.0%
ACATGCATAACTCTTGCCCA+AGG - chr1_1:28288865-28288884 None:intergenic 45.0%
AAGACCGGAAAGTTTCAAGG+GGG + chr1_1:28289338-28289357 Msa0017060:intron 45.0%
! TCACATATTGTGGTGGAAGG+AGG + chr1_1:28289422-28289441 Msa0017060:intron 45.0%
ACTCCTGCCATAGTTTGGAA+AGG - chr1_1:28289555-28289574 None:intergenic 45.0%
AGCTACAAGCCCACAACTTA+TGG + chr1_1:28289876-28289895 Msa0017060:intron 45.0%
GGAACAATAGCCGGTGTAAA+TGG - chr1_1:28289955-28289974 None:intergenic 45.0%
CTGCAGAGTAAAACTTGACG+TGG - chr1_1:28290130-28290149 None:intergenic 45.0%
! CACGTCAAGTTTTACTCTGC+AGG + chr1_1:28290128-28290147 Msa0017060:CDS 45.0%
GTCTTGACAGTGTATTGTGG+AGG + chr1_1:28291276-28291295 Msa0017060:intron 45.0%
CCATATACATAGGGGTTTCC+TGG - chr1_1:28291536-28291555 None:intergenic 45.0%
CCAGGAAACCCCTATGTATA+TGG + chr1_1:28291533-28291552 Msa0017060:CDS 45.0%
GAAGATAGGAGAGAAAGGGA+GGG + chr1_1:28291736-28291755 Msa0017060:intron 45.0%
GTTAGGGGAGGGAAATGAAT+AGG + chr1_1:28291770-28291789 Msa0017060:intron 45.0%
!!! GGGTTTTGGAGGGTTTTGTA+GGG - chr1_1:28291893-28291912 None:intergenic 45.0%
!!! AGGGTTTTGGAGGGTTTTGT+AGG - chr1_1:28291894-28291913 None:intergenic 45.0%
GAGAAAAAAGGGATGGAGGA+AGG - chr1_1:28291914-28291933 None:intergenic 45.0%
CTTGGAGAAAAAAGGGATGG+AGG - chr1_1:28291918-28291937 None:intergenic 45.0%
AGGCTTGGAGAAAAAAGGGA+TGG - chr1_1:28291921-28291940 None:intergenic 45.0%
GGAGAAGGCTTGGAGAAAAA+AGG - chr1_1:28291926-28291945 None:intergenic 45.0%
TAGGAGAAAAAGGGAGGAGA+AGG - chr1_1:28291941-28291960 None:intergenic 45.0%
GGAATTTCTCATTCGGCAAG+GGG + chr1_1:28292339-28292358 Msa0017060:intron 45.0%
GAATTTCTCATTCGGCAAGG+GGG + chr1_1:28292340-28292359 Msa0017060:CDS 45.0%
GTATTTCAGGAACGTCCAAG+TGG + chr1_1:28292908-28292927 Msa0017060:intron 45.0%
TTCACCAAATTCTGCCCACT+TGG - chr1_1:28292926-28292945 None:intergenic 45.0%
! AAGTGGGCAGAATTTGGTGA+AGG + chr1_1:28292925-28292944 Msa0017060:CDS 45.0%
! AGTGGGCAGAATTTGGTGAA+GGG + chr1_1:28292926-28292945 Msa0017060:CDS 45.0%
!!! CGACCCTGTTTCTGATCTTT+TGG + chr1_1:28292999-28293018 Msa0017060:CDS 45.0%
! GCTCTATGGTCTTGATCATG+AGG + chr1_1:28293148-28293167 Msa0017060:CDS 45.0%
TCGTAACGTAACCGTGTCTT+CGG + chr1_1:28293178-28293197 Msa0017060:CDS 45.0%
TAACCGTGTCTTCGGGAAAT+AGG + chr1_1:28293186-28293205 Msa0017060:CDS 45.0%
AACCGTGTCTTCGGGAAATA+GGG + chr1_1:28293187-28293206 Msa0017060:CDS 45.0%
AGGGCTCAACCTTTAACTCT+TGG + chr1_1:28293206-28293225 Msa0017060:CDS 45.0%
ATCTGGATTTCCTGCATCTC+AGG + chr1_1:28293297-28293316 Msa0017060:intron 45.0%
!! CATCTCAGGTGTCATTCCAA+CGG + chr1_1:28293311-28293330 Msa0017060:intron 45.0%
TTACTTCCACCACATTGCAG+TGG + chr1_1:28293360-28293379 Msa0017060:CDS 45.0%
TACACCCACATCCAACAACT+AGG - chr1_1:28293694-28293713 None:intergenic 45.0%
TGCTGCCAAACAAAAGCAGA+AGG - chr1_1:28294350-28294369 None:intergenic 45.0%
GATGACTGCTACATAAGCAC+AGG - chr1_1:28294709-28294728 None:intergenic 45.0%
GCGCATTTGTCCATTCATGA+AGG + chr1_1:28294766-28294785 Msa0017060:intron 45.0%
ACATAAGCAGACCTCCACAA+GGG - chr1_1:28294792-28294811 None:intergenic 45.0%
TACATAAGCAGACCTCCACA+AGG - chr1_1:28294793-28294812 None:intergenic 45.0%
GACTTGAATGGATGTCCAAC+AGG + chr1_1:28294822-28294841 Msa0017060:intron 45.0%
TGGTGCAGTGAAATCCATGT+AGG - chr1_1:28294849-28294868 None:intergenic 45.0%
GATAAGGGGACTTTGGATAC+TGG - chr1_1:28295668-28295687 None:intergenic 45.0%
ATCCTGAGACAGCAGATGTT+TGG + chr1_1:28295830-28295849 Msa0017060:intron 45.0%
TTCCAAACATCTGCTGTCTC+AGG - chr1_1:28295835-28295854 None:intergenic 45.0%
ATAACACCCTCAGTTTGAGG+GGG - chr1_1:28296852-28296871 None:intergenic 45.0%
GATAACACCCTCAGTTTGAG+GGG - chr1_1:28296853-28296872 None:intergenic 45.0%
TAGAACAGGGTTGTGAGCTA+GGG + chr1_1:28297044-28297063 Msa0017060:intron 45.0%
AAGCTGCTGCAGAAATTCTC+TGG - chr1_1:28297146-28297165 None:intergenic 45.0%
TGAGGCTGAATACAGAAGCT+TGG - chr1_1:28297172-28297191 None:intergenic 45.0%
! TGTTGCAAGATCAAGTGCTG+AGG - chr1_1:28297190-28297209 None:intergenic 45.0%
! GACCAAATCTTGTTTCCTGG+TGG - chr1_1:28297230-28297249 None:intergenic 45.0%
! TGGGACCAAATCTTGTTTCC+TGG - chr1_1:28297233-28297252 None:intergenic 45.0%
!! CTGGCTTTTGTGATGCAGAT+TGG - chr1_1:28297305-28297324 None:intergenic 45.0%
TCAGAACCCATTGCAATCAC+TGG - chr1_1:28297324-28297343 None:intergenic 45.0%
! TGCAATGGGTTCTGATGAAG+AGG + chr1_1:28297329-28297348 Msa0017060:intron 45.0%
AAGAGGCTGCTTCAATAGTC+AGG + chr1_1:28297346-28297365 Msa0017060:intron 45.0%
! TGGTTCCCTTTTAGTACCTG+AGG + chr1_1:28297379-28297398 Msa0017060:intron 45.0%
GCTTTCCAGTGATCTTCCAA+AGG + chr1_1:28297414-28297433 Msa0017060:intron 45.0%
! CTAACCCTTTGGAAGATCAC+TGG - chr1_1:28297422-28297441 None:intergenic 45.0%
GATCTTCCAAAGGGTTAGAG+AGG + chr1_1:28297424-28297443 Msa0017060:intron 45.0%
! AGTTTAGTGCTGGATGCCAT+AGG + chr1_1:28297570-28297589 Msa0017060:intron 45.0%
! CAGGCTACTGTGCTTAGTTT+TGG - chr1_1:28297893-28297912 None:intergenic 45.0%
AACTAAGCACAGTAGCCTGT+AGG + chr1_1:28297894-28297913 Msa0017060:intron 45.0%
ACTAAGCACAGTAGCCTGTA+GGG + chr1_1:28297895-28297914 Msa0017060:intron 45.0%
TCAGCAGATTCAAAACCAGG+AGG + chr1_1:28297969-28297988 Msa0017060:intron 45.0%
GTCTATATGAGTCAACCTCC+TGG - chr1_1:28297987-28298006 None:intergenic 45.0%
GAAATGGGCCATTCAACAAC+TGG - chr1_1:28298051-28298070 None:intergenic 45.0%
ACAGTTGCAGGTTTCACAAC+AGG + chr1_1:28298101-28298120 Msa0017060:intron 45.0%
AAAACCTTTGGCCACAAGTC+TGG + chr1_1:28298163-28298182 Msa0017060:intron 45.0%
CAAATACAAGGCCAGACTTG+TGG - chr1_1:28298177-28298196 None:intergenic 45.0%
ACAGGCAGTGGGATGTAAAT+GGG - chr1_1:28298237-28298256 None:intergenic 45.0%
AATTCCATGCTTCCCTCTAG+TGG + chr1_1:28298418-28298437 Msa0017060:intron 45.0%
CTCACACTATGACCACTAGA+GGG - chr1_1:28298433-28298452 None:intergenic 45.0%
ACTCACACTATGACCACTAG+AGG - chr1_1:28298434-28298453 None:intergenic 45.0%
TTATGGGGATGAATGCGATG+AGG + chr1_1:28298455-28298474 Msa0017060:intron 45.0%
ACTGCTTCTTCTGCATCTGT+TGG - chr1_1:28298506-28298525 None:intergenic 45.0%
ACTGCTATGGTGTGACTCAA+TGG + chr1_1:28298529-28298548 Msa0017060:intron 45.0%
GAGGGAGACAGAGTAGTAAT+AGG + chr1_1:28298575-28298594 Msa0017060:intron 45.0%
GACAGAGTAGTAATAGGGAG+AGG + chr1_1:28298581-28298600 Msa0017060:intron 45.0%
! AGAGGATTTAGAATGGGTCC+AGG + chr1_1:28298599-28298618 Msa0017060:intron 45.0%
TGACTAGCAACAGAGTGATG+AGG + chr1_1:28298695-28298714 Msa0017060:intron 45.0%
GAGGAATGAGAGAACTGAGT+AGG + chr1_1:28298719-28298738 Msa0017060:intron 45.0%
ACTTGGTCATCCTCATCATG+AGG + chr1_1:28298804-28298823 Msa0017060:intron 45.0%
ATTTACCCTATGGGAGGAAC+AGG + chr1_1:28298860-28298879 Msa0017060:intron 45.0%
AGAATCCTGTTCCTCCCATA+GGG - chr1_1:28298868-28298887 None:intergenic 45.0%
AGCTAGAGCCAAATTACAGC+TGG + chr1_1:28299436-28299455 Msa0017060:intron 45.0%
GCTAGAGCCAAATTACAGCT+GGG + chr1_1:28299437-28299456 Msa0017060:intron 45.0%
TGGCTATCCCAGCTGTAATT+TGG - chr1_1:28299447-28299466 None:intergenic 45.0%
TGGTTCTCCGAAGTTCAATC+TGG - chr1_1:28299473-28299492 None:intergenic 45.0%
AGATTGAACTTCGGAGAACC+AGG + chr1_1:28299472-28299491 Msa0017060:intron 45.0%
CTGTGATAGTATGTTTGGCC+AGG - chr1_1:28299519-28299538 None:intergenic 45.0%
ATGTGAAGTTGCATCGCGTA+AGG + chr1_1:28299702-28299721 Msa0017060:CDS 45.0%
GGTTGACGAAGTGATATCTC+TGG + chr1_1:28299723-28299742 Msa0017060:CDS 45.0%
GACGAAGTGATATCTCTGGA+TGG + chr1_1:28299727-28299746 Msa0017060:CDS 45.0%
CTTGCAAACAGCTATAGGCA+AGG - chr1_1:28299924-28299943 None:intergenic 45.0%
!! AGGAGCTCTAAGTTGAGACA+TGG - chr1_1:28300049-28300068 None:intergenic 45.0%
GTCTCAACTTAGAGCTCCTA+AGG + chr1_1:28300050-28300069 Msa0017060:CDS 45.0%
! GGGGTACCAGTCCATATATT+TGG - chr1_1:28300135-28300154 None:intergenic 45.0%
!! AATATATGGACTGGTACCCC+TGG + chr1_1:28300135-28300154 Msa0017060:CDS 45.0%
GTAGAAAGGTAGGTGAGGAA+TGG + chr1_1:28300202-28300221 Msa0017060:CDS 45.0%
GGAATGGTTTACCACTACGA+AGG + chr1_1:28300218-28300237 Msa0017060:CDS 45.0%
ATGGTTTACCACTACGAAGG+TGG + chr1_1:28300221-28300240 Msa0017060:CDS 45.0%
! GGCTTAAAAGCCCTCTAGAA+AGG + chr1_1:28300886-28300905 Msa0017060:intron 45.0%
! AGGCTCAAAGCCCTCTAAAA+AGG + chr1_1:28300906-28300925 Msa0017060:intron 45.0%
! GGCATCTGAGCCTTTTTAGA+GGG - chr1_1:28300919-28300938 None:intergenic 45.0%
!! GTCTTTTAGGCGGTTTCTAG+AGG - chr1_1:28301009-28301028 None:intergenic 45.0%
!! TGGGCTTTTGGTCTTTTAGG+CGG - chr1_1:28301019-28301038 None:intergenic 45.0%
!! AGCTGGGCTTTTGGTCTTTT+AGG - chr1_1:28301022-28301041 None:intergenic 45.0%
TTAGCATGACTTCAACCCCA+AGG - chr1_1:28301046-28301065 None:intergenic 45.0%
CATGCTAAAACAAGCCCACA+AGG + chr1_1:28301058-28301077 Msa0017060:intron 45.0%
GAGGCTATAAATACCACCCT+TGG + chr1_1:28301080-28301099 Msa0017060:intron 45.0%
GTGAAGGGAGAAGAAGGAAA+TGG + chr1_1:28301479-28301498 Msa0017060:intron 45.0%
AGTAGAATCCCAGAAGCTTG+AGG + chr1_1:28301516-28301535 Msa0017060:CDS 45.0%
AGTGTCAGCTATGAAACCAC+GGG + chr1_1:28301792-28301811 Msa0017060:intron 45.0%
AGTTTAAATCCCCTAGGGGA+CGG + chr1_1:28301819-28301838 Msa0017060:intron 45.0%
! ATTTTACAACCGTCCCCTAG+GGG - chr1_1:28301831-28301850 None:intergenic 45.0%
! CATTTTACAACCGTCCCCTA+GGG - chr1_1:28301832-28301851 None:intergenic 45.0%
! TCATTTTACAACCGTCCCCT+AGG - chr1_1:28301833-28301852 None:intergenic 45.0%
TCACATAATGTCAGCCCTCA+TGG - chr1_1:28302142-28302161 None:intergenic 45.0%
ATGAGGGCTGACATTATGTG+AGG + chr1_1:28302141-28302160 Msa0017060:intron 45.0%
GTCAAACTGTAGTTGCAGGA+TGG + chr1_1:28302333-28302352 Msa0017060:intron 45.0%
TGGTTCAACATAGCAGAAGG+AGG + chr1_1:28302408-28302427 Msa0017060:CDS 45.0%
CTATTGACAGGACCAAATGG+TGG + chr1_1:28302468-28302487 Msa0017060:CDS 45.0%
! ATTTGTGCTGCTGCACTACT+TGG + chr1_1:28302516-28302535 Msa0017060:CDS 45.0%
! TTTGTGCTGCTGCACTACTT+GGG + chr1_1:28302517-28302536 Msa0017060:CDS 45.0%
GTCAAAATAGGGAATCACGG+CGG - chr1_1:28302571-28302590 None:intergenic 45.0%
CTTAATTGTGGCCAACCCTT+TGG - chr1_1:28302924-28302943 None:intergenic 45.0%
!! CAAAGGGTTGGCCACAATTA+AGG + chr1_1:28302922-28302941 Msa0017060:intron 45.0%
AGCGCTATTAGACACTAAGC+TGG - chr1_1:28303071-28303090 None:intergenic 45.0%
ATAGACGGAAGAGGCAAATG+TGG + chr1_1:28303351-28303370 Msa0017060:intron 45.0%
TAGACGGAAGAGGCAAATGT+GGG + chr1_1:28303352-28303371 Msa0017060:intron 45.0%
GTCCTTAACAGTCCCACATT+GGG + chr1_1:28303550-28303569 Msa0017060:intron 45.0%
! TGCCTTTTCTCACCCAATGT+GGG - chr1_1:28303565-28303584 None:intergenic 45.0%
! ATGCCTTTTCTCACCCAATG+TGG - chr1_1:28303566-28303585 None:intergenic 45.0%
! CAAAACTAGCTTGTGAGGTG+AGG - chr1_1:28303619-28303638 None:intergenic 45.0%
GAACTTCGATCCATCATTGC+TGG + chr1_1:28304210-28304229 Msa0017060:CDS 45.0%
AACAAGCACAAGGCTCCTTT+CGG - chr1_1:28304241-28304260 None:intergenic 45.0%
! CTTTTGCAGTCTCTGTTCCT+CGG - chr1_1:28304275-28304294 None:intergenic 45.0%
GAGGAACAGAGACTGCAAAA+GGG + chr1_1:28304274-28304293 Msa0017060:CDS 45.0%
ATGGGCACAACTTGCATTGA+TGG + chr1_1:28304420-28304439 Msa0017060:CDS 45.0%
! TTTGAAACTGCCAAGAGGGA+AGG + chr1_1:28304498-28304517 Msa0017060:CDS 45.0%
TGAAGAGCCTATAGTCATCG+GGG - chr1_1:28304859-28304878 None:intergenic 45.0%
!! TTGCCTGTTCTAGGGGTATT+AGG - chr1_1:28305100-28305119 None:intergenic 45.0%
CTCAGCTTTCTGTCCTATAG+AGG - chr1_1:28305195-28305214 None:intergenic 45.0%
GGGAAAGGCAAACATATGAG+CGG - chr1_1:28305388-28305407 None:intergenic 45.0%
!! TGTGATGGACTGATGACAGA+CGG + chr1_1:28305530-28305549 Msa0017060:intron 45.0%
ATGACAGACGGATAATCTCG+AGG + chr1_1:28305542-28305561 Msa0017060:intron 45.0%
GTGCACATCGATCGAAAGAA+GGG + chr1_1:28305574-28305593 Msa0017060:CDS 45.0%
!! CTAGGCTTTTTCCTGGAACT+AGG - chr1_1:28305626-28305645 None:intergenic 45.0%
GAGTTTCTATTTGGCAGGCT+AGG - chr1_1:28305644-28305663 None:intergenic 45.0%
ATCAACCAACTTCCGAATCG+AGG + chr1_1:28305669-28305688 Msa0017060:CDS 45.0%
CTTAACAGGAAGCCTCGATT+CGG - chr1_1:28305684-28305703 None:intergenic 45.0%
ATGCAGTTACGCGTAAACGT+TGG - chr1_1:28305745-28305764 None:intergenic 45.0%
TTAGCGCCACAGATCATTCT+TGG + chr1_1:28306018-28306037 Msa0017060:three_prime_UTR 45.0%
!!! TACTAATAAAATTTAAAATA+TGG - chr1_1:28291116-28291135 None:intergenic 5.0%
!!! TTTTTTGTATTTTTTTTTAT+TGG + chr1_1:28302201-28302220 Msa0017060:intron 5.0%
!! TCCCTCGGTGTCTGTTCTTA+AGG + chr1_1:28287463-28287482 Msa0017060:five_prime_UTR 50.0%
GAGAAAGGGAACGAAAGCGA+GGG - chr1_1:28287589-28287608 None:intergenic 50.0%
AGAGAAAGGGAACGAAAGCG+AGG - chr1_1:28287590-28287609 None:intergenic 50.0%
GAGGGAATGAAGGAAGAAGG+AGG - chr1_1:28287632-28287651 None:intergenic 50.0%
CGAGAGGGAATGAAGGAAGA+AGG - chr1_1:28287635-28287654 None:intergenic 50.0%
GAGGAAACGAGAGGGAATGA+AGG - chr1_1:28287642-28287661 None:intergenic 50.0%
TCATTCCCTCTCGTTTCCTC+AGG + chr1_1:28287642-28287661 Msa0017060:CDS 50.0%
!! CACGTGTCAGTGTTTGGTGT+CGG - chr1_1:28288022-28288041 None:intergenic 50.0%
ACCCGACATGACACAAACAC+CGG + chr1_1:28288378-28288397 Msa0017060:intron 50.0%
ACCGGTGTTTGTGTCATGTC+GGG - chr1_1:28288382-28288401 None:intergenic 50.0%
TGTAGGCTACTATGGGGAAC+AGG + chr1_1:28288706-28288725 Msa0017060:intron 50.0%
GGTCGGGGATTGTATCTCAT+AGG + chr1_1:28288727-28288746 Msa0017060:intron 50.0%
!!! ACCGGCCAACCCCAATTTTT+TGG + chr1_1:28288808-28288827 Msa0017060:intron 50.0%
!!! GGCCAACCCCAATTTTTTGG+AGG + chr1_1:28288811-28288830 Msa0017060:intron 50.0%
GGCCTCCAAAAAATTGGGGT+TGG - chr1_1:28288816-28288835 None:intergenic 50.0%
! GCAGCACAAGCAAGGGTTTT+AGG - chr1_1:28288837-28288856 None:intergenic 50.0%
GGTACAAGCAGCACAAGCAA+GGG - chr1_1:28288844-28288863 None:intergenic 50.0%
AGGTACAAGCAGCACAAGCA+AGG - chr1_1:28288845-28288864 None:intergenic 50.0%
!! TGCTTGTGCTGCTTGTACCT+TGG + chr1_1:28288845-28288864 Msa0017060:intron 50.0%
!! GCTTGTGCTGCTTGTACCTT+GGG + chr1_1:28288846-28288865 Msa0017060:intron 50.0%
AGACCGGAAAGTTTCAAGGG+GGG + chr1_1:28289339-28289358 Msa0017060:intron 50.0%
CTGCAACTCCTGCCATAGTT+TGG - chr1_1:28289560-28289579 None:intergenic 50.0%
TGTTTGTGCAGTCTGAAGGC+AGG + chr1_1:28290064-28290083 Msa0017060:intron 50.0%
GCGGGTTTAAATCCCTTTGG+CGG + chr1_1:28290440-28290459 Msa0017060:CDS 50.0%
TCTGATCGTAGACCGCCAAA+GGG - chr1_1:28290455-28290474 None:intergenic 50.0%
ATCTGATCGTAGACCGCCAA+AGG - chr1_1:28290456-28290475 None:intergenic 50.0%
TGGTTGCCCTGTTGTGGTAT+TGG + chr1_1:28290490-28290509 Msa0017060:intron 50.0%
TGCTGATGTGAGATTTGGGG+AGG + chr1_1:28290828-28290847 Msa0017060:intron 50.0%
GCTGATGTGAGATTTGGGGA+GGG + chr1_1:28290829-28290848 Msa0017060:intron 50.0%
! TCTTGGTTCGAGCTTGAGCT+GGG - chr1_1:28291312-28291331 None:intergenic 50.0%
! TTCTTGGTTCGAGCTTGAGC+TGG - chr1_1:28291313-28291332 None:intergenic 50.0%
ACTTTCAGGCATGCTCATCC+AGG + chr1_1:28291515-28291534 Msa0017060:intron 50.0%
CCTACTACAGGCATAGGTTC+TGG - chr1_1:28291590-28291609 None:intergenic 50.0%
CCAGAACCTATGCCTGTAGT+AGG + chr1_1:28291587-28291606 Msa0017060:CDS 50.0%
GGAAGATAGGAGAGAAAGGG+AGG + chr1_1:28291735-28291754 Msa0017060:intron 50.0%
ATAGGAGAGAAAGGGAGGGT+GGG + chr1_1:28291740-28291759 Msa0017060:intron 50.0%
!!! GATGGAGGAAGGGTTTTGGA+GGG - chr1_1:28291903-28291922 None:intergenic 50.0%
! AAGGGATGGAGGAAGGGTTT+TGG - chr1_1:28291907-28291926 None:intergenic 50.0%
GAAAAAGGGAGGAGAAGGCT+TGG - chr1_1:28291936-28291955 None:intergenic 50.0%
GCACATGGCAAAGCTGATAC+TGG + chr1_1:28292586-28292605 Msa0017060:intron 50.0%
ACGTCCAAGTGGGCAGAATT+TGG + chr1_1:28292919-28292938 Msa0017060:CDS 50.0%
! GTGGGCAGAATTTGGTGAAG+GGG + chr1_1:28292927-28292946 Msa0017060:CDS 50.0%
! TGGGCAGAATTTGGTGAAGG+GGG + chr1_1:28292928-28292947 Msa0017060:CDS 50.0%
CGTAACGTAACCGTGTCTTC+GGG + chr1_1:28293179-28293198 Msa0017060:CDS 50.0%
AGCCCTATTTCCCGAAGACA+CGG - chr1_1:28293192-28293211 None:intergenic 50.0%
TGGAATGACACCTGAGATGC+AGG - chr1_1:28293310-28293329 None:intergenic 50.0%
!! TCAGGTGTCATTCCAACGGA+TGG + chr1_1:28293315-28293334 Msa0017060:intron 50.0%
GGTAATCCACTGCAATGTGG+TGG - chr1_1:28293369-28293388 None:intergenic 50.0%
TCCATTCATGAAGGCCCTTG+TGG + chr1_1:28294775-28294794 Msa0017060:intron 50.0%
TCCACAAGGGCCTTCATGAA+TGG - chr1_1:28294779-28294798 None:intergenic 50.0%
ATTCATGAAGGCCCTTGTGG+AGG + chr1_1:28294778-28294797 Msa0017060:intron 50.0%
GAAATCCATGTAGGCCCTGT+TGG - chr1_1:28294840-28294859 None:intergenic 50.0%
TTTAATTCGTCCCACGTGGG+TGG + chr1_1:28295485-28295504 Msa0017060:CDS 50.0%
!!! CCAAGTTTTGGAGCTCACCA+AGG - chr1_1:28295538-28295557 None:intergenic 50.0%
CCTTGGTGAGCTCCAAAACT+TGG + chr1_1:28295535-28295554 Msa0017060:intron 50.0%
GGGACTTTGGATACTGGAAG+AGG - chr1_1:28295662-28295681 None:intergenic 50.0%
TAACACCCTCAGTTTGAGGG+GGG - chr1_1:28296851-28296870 None:intergenic 50.0%
TCTGCCCATTGATCATGAGC+TGG + chr1_1:28296937-28296956 Msa0017060:intron 50.0%
GTAGAACAGGGTTGTGAGCT+AGG + chr1_1:28297043-28297062 Msa0017060:intron 50.0%
GCCCACCAGGAAACAAGATT+TGG + chr1_1:28297225-28297244 Msa0017060:intron 50.0%
! GATGACAGGAGAAGCACATC+TGG - chr1_1:28297270-28297289 None:intergenic 50.0%
GATGTGCTTCTCCTGTCATC+TGG + chr1_1:28297270-28297289 Msa0017060:intron 50.0%
GAAGTCAAGCACTCTCCCAA+TGG - chr1_1:28297678-28297697 None:intergenic 50.0%
CAGAGAGGGGTCACATTTAC+TGG + chr1_1:28297859-28297878 Msa0017060:intron 50.0%
CTAAGCACAGTAGCCTGTAG+GGG + chr1_1:28297896-28297915 Msa0017060:intron 50.0%
GACAGGCAGTGGGATGTAAA+TGG - chr1_1:28298238-28298257 None:intergenic 50.0%
CCTGAACATAGACAGGCAGT+GGG - chr1_1:28298248-28298267 None:intergenic 50.0%
TCCTGAACATAGACAGGCAG+TGG - chr1_1:28298249-28298268 None:intergenic 50.0%
AGGAAGAGATACAAGGGTCC+AGG + chr1_1:28298265-28298284 Msa0017060:intron 50.0%
AAGCAATGCAAAGCCCTGAG+TGG - chr1_1:28298337-28298356 None:intergenic 50.0%
ATGACCACTAGAGGGAAGCA+TGG - chr1_1:28298425-28298444 None:intergenic 50.0%
GCTTCTTCTGCATCTGTTGG+TGG - chr1_1:28298503-28298522 None:intergenic 50.0%
! GGATTTAGAATGGGTCCAGG+AGG + chr1_1:28298602-28298621 Msa0017060:intron 50.0%
TTAGAATGGGTCCAGGAGGA+AGG + chr1_1:28298606-28298625 Msa0017060:intron 50.0%
TCTCATCATCACCTTCCTCC+TGG - chr1_1:28298620-28298639 None:intergenic 50.0%
AGCAACAGAGTGATGAGGTG+AGG + chr1_1:28298700-28298719 Msa0017060:intron 50.0%
GAGAATCCTGTTCCTCCCAT+AGG - chr1_1:28298869-28298888 None:intergenic 50.0%
GCCAGAGCCAGATTGAACTT+CGG + chr1_1:28299463-28299482 Msa0017060:intron 50.0%
! TCCGAAGTTCAATCTGGCTC+TGG - chr1_1:28299467-28299486 None:intergenic 50.0%
ACAGGAAGCAGTGTGGTTCA+AGG + chr1_1:28300095-28300114 Msa0017060:CDS 50.0%
CAGGAAGCAGTGTGGTTCAA+GGG + chr1_1:28300096-28300115 Msa0017060:CDS 50.0%
GTTTACCACTACGAAGGTGG+AGG + chr1_1:28300224-28300243 Msa0017060:CDS 50.0%
!! GGGCTTTGAGCCTTTCTAGA+GGG - chr1_1:28300899-28300918 None:intergenic 50.0%
!! AGGGCTTTGAGCCTTTCTAG+AGG - chr1_1:28300900-28300919 None:intergenic 50.0%
! GGGCATCTGAGCCTTTTTAG+AGG - chr1_1:28300920-28300939 None:intergenic 50.0%
!! GAAAGGAGGCGCCCTAAAAA+GGG - chr1_1:28300972-28300991 None:intergenic 50.0%
!! AGAAAGGAGGCGCCCTAAAA+AGG - chr1_1:28300973-28300992 None:intergenic 50.0%
ACCAAAAGCCCAGCTTCCTT+GGG + chr1_1:28301027-28301046 Msa0017060:intron 50.0%
ACTTCAACCCCAAGGAAGCT+GGG - chr1_1:28301038-28301057 None:intergenic 50.0%
GCTAAAACAAGCCCACAAGG+AGG + chr1_1:28301061-28301080 Msa0017060:intron 50.0%
CTTGCAGTGAAGGGAGAAGA+AGG + chr1_1:28301473-28301492 Msa0017060:intron 50.0%
TTGACAGGACCAAATGGTGG+TGG + chr1_1:28302471-28302490 Msa0017060:CDS 50.0%
GCTGCACTACTTGGGATATG+TGG + chr1_1:28302525-28302544 Msa0017060:CDS 50.0%
!! CGAGTATTAGTGCTGACCGA+TGG + chr1_1:28303302-28303321 Msa0017060:intron 50.0%
GGTCCTTAACAGTCCCACAT+TGG + chr1_1:28303549-28303568 Msa0017060:intron 50.0%
CACCCAATGTGGGACTGTTA+AGG - chr1_1:28303555-28303574 None:intergenic 50.0%
GTCCCACATTGGGTGAGAAA+AGG + chr1_1:28303560-28303579 Msa0017060:intron 50.0%
TTCGGTGGTTCCAGCAATGA+TGG - chr1_1:28304223-28304242 None:intergenic 50.0%
TCATTGCTGGAACCACCGAA+AGG + chr1_1:28304223-28304242 Msa0017060:CDS 50.0%
CGAGGAACAGAGACTGCAAA+AGG + chr1_1:28304273-28304292 Msa0017060:CDS 50.0%
GCAAAAGGGACTTGCATTGC+AGG + chr1_1:28304288-28304307 Msa0017060:CDS 50.0%
CCATCTTGCAGCATCCAAGT+AGG - chr1_1:28304456-28304475 None:intergenic 50.0%
CCTACTTGGATGCTGCAAGA+TGG + chr1_1:28304453-28304472 Msa0017060:CDS 50.0%
CTCAGGAATTCCTTCCCTCT+TGG - chr1_1:28304511-28304530 None:intergenic 50.0%
GAAGAGCCTATAGTCATCGG+GGG - chr1_1:28304858-28304877 None:intergenic 50.0%
CGTGCACATCGATCGAAAGA+AGG + chr1_1:28305573-28305592 Msa0017060:CDS 50.0%
CGACACCAAACACTGACACG+TGG + chr1_1:28288020-28288039 Msa0017060:intron 55.0%
GGTGTCCACGTGTCAGTGTT+TGG - chr1_1:28288028-28288047 None:intergenic 55.0%
GGCTACTATGGGGAACAGGT+CGG + chr1_1:28288710-28288729 Msa0017060:intron 55.0%
GCTACTATGGGGAACAGGTC+GGG + chr1_1:28288711-28288730 Msa0017060:intron 55.0%
CTACTATGGGGAACAGGTCG+GGG + chr1_1:28288712-28288731 Msa0017060:intron 55.0%
AATCCCTCCTCGTCCACAAC+CGG + chr1_1:28288790-28288809 Msa0017060:intron 55.0%
!! AAATTGGGGTTGGCCGGTTG+TGG - chr1_1:28288806-28288825 None:intergenic 55.0%
CCACCCCCCTTGAAACTTTC+CGG - chr1_1:28289345-28289364 None:intergenic 55.0%
TCAGATAGCATCCCCAGAGC+TGG + chr1_1:28290470-28290489 Msa0017060:CDS 55.0%
ACAACAGGGCAACCAGCTCT+GGG - chr1_1:28290485-28290504 None:intergenic 55.0%
GATGTGAGATTTGGGGAGGG+TGG + chr1_1:28290832-28290851 Msa0017060:intron 55.0%
GGACAGAGACCGCTGTCAAT+TGG - chr1_1:28291370-28291389 None:intergenic 55.0%
GATAGGAGAGAAAGGGAGGG+TGG + chr1_1:28291739-28291758 Msa0017060:intron 55.0%
TAGGAGAGAAAGGGAGGGTG+GGG + chr1_1:28291741-28291760 Msa0017060:intron 55.0%
GGGGAGGGAAATGAATAGGG+AGG + chr1_1:28291774-28291793 Msa0017060:intron 55.0%
!! GGATGGAGGAAGGGTTTTGG+AGG - chr1_1:28291904-28291923 None:intergenic 55.0%
! GGGCAGAATTTGGTGAAGGG+GGG + chr1_1:28292929-28292948 Msa0017060:CDS 55.0%
GATGTCCAACAGGGCCTACA+TGG + chr1_1:28294832-28294851 Msa0017060:intron 55.0%
AACAGTCCCCCCTCAAACTG+AGG + chr1_1:28296842-28296861 Msa0017060:intron 55.0%
ACAGTCCCCCCTCAAACTGA+GGG + chr1_1:28296843-28296862 Msa0017060:intron 55.0%
! TTCCTGGTGGGCAAAGAAGC+AGG - chr1_1:28297217-28297236 None:intergenic 55.0%
GGGCTTCTGATCCAGATGAC+AGG - chr1_1:28297284-28297303 None:intergenic 55.0%
! AGTGCTGGATGCCATAGGAG+AGG + chr1_1:28297575-28297594 Msa0017060:intron 55.0%
AAGGCCAGACTTGTGGCCAA+AGG - chr1_1:28298170-28298189 None:intergenic 55.0%
CCCACTGCCTGTCTATGTTC+AGG + chr1_1:28298245-28298264 Msa0017060:intron 55.0%
TGCATAGCCTGCAACCACTC+AGG + chr1_1:28298320-28298339 Msa0017060:intron 55.0%
GCATAGCCTGCAACCACTCA+GGG + chr1_1:28298321-28298340 Msa0017060:intron 55.0%
TGGGGATGAATGCGATGAGG+AGG + chr1_1:28298458-28298477 Msa0017060:intron 55.0%
TTCCGTGGACAAAGCAGCTG+AGG + chr1_1:28299864-28299883 Msa0017060:CDS 55.0%
! GTCCTCAGCTGCTTTGTCCA+CGG - chr1_1:28299869-28299888 None:intergenic 55.0%
ACCACACTGCTTCCTGTTCC+CGG - chr1_1:28300092-28300111 None:intergenic 55.0%
AGGCTCAGATGCCCTCTAGA+AGG + chr1_1:28300926-28300945 Msa0017060:intron 55.0%
! GGCTCAGATGCCCTCTAGAA+GGG + chr1_1:28300927-28300946 Msa0017060:intron 55.0%
GACCAAAAGCCCAGCTTCCT+TGG + chr1_1:28301026-28301045 Msa0017060:intron 55.0%
CCAAAAGCCCAGCTTCCTTG+GGG + chr1_1:28301028-28301047 Msa0017060:intron 55.0%
GACTTCAACCCCAAGGAAGC+TGG - chr1_1:28301039-28301058 None:intergenic 55.0%
!! TGCCTTGAGAGTGCTCCCAA+GGG - chr1_1:28301099-28301118 None:intergenic 55.0%
!! ATGCCTTGAGAGTGCTCCCA+AGG - chr1_1:28301100-28301119 None:intergenic 55.0%
AAGCACAAGGCTCCTTTCGG+TGG - chr1_1:28304238-28304257 None:intergenic 55.0%
!! TGGCAGGCTAGGCTTTTTCC+TGG - chr1_1:28305633-28305652 None:intergenic 55.0%
!! GGAAGCCTCGATTCGGAAGT+TGG - chr1_1:28305677-28305696 None:intergenic 55.0%
!! AACCACACTCGGTGTGCGTG+TGG + chr1_1:28287431-28287450 Msa0017060:five_prime_UTR 60.0%
CCGGAAAGTTTCAAGGGGGG+TGG + chr1_1:28289342-28289361 Msa0017060:intron 60.0%
CAACAGGGCAACCAGCTCTG+GGG - chr1_1:28290484-28290503 None:intergenic 60.0%
CACAACAGGGCAACCAGCTC+TGG - chr1_1:28290486-28290505 None:intergenic 60.0%
CAGAGCTGGTTGCCCTGTTG+TGG + chr1_1:28290484-28290503 Msa0017060:CDS 60.0%
AGAAAGGGAGGGTGGGGCAT+TGG + chr1_1:28291747-28291766 Msa0017060:intron 60.0%
! GAAAGGGAGGGTGGGGCATT+GGG + chr1_1:28291748-28291767 Msa0017060:intron 60.0%
!! GAGGGTGGGGCATTGGGTTA+GGG + chr1_1:28291754-28291773 Msa0017060:intron 60.0%
!! AGGGTGGGGCATTGGGTTAG+GGG + chr1_1:28291755-28291774 Msa0017060:intron 60.0%
!! TGGGGCATTGGGTTAGGGGA+GGG + chr1_1:28291759-28291778 Msa0017060:intron 60.0%
TTGGTGAAGGGGGGCTGTTG+TGG + chr1_1:28292938-28292957 Msa0017060:CDS 60.0%
TGGTGAAGGGGGGCTGTTGT+GGG + chr1_1:28292939-28292958 Msa0017060:CDS 60.0%
AACCCAGTAGCCACCCACGT+GGG - chr1_1:28295498-28295517 None:intergenic 60.0%
TAACCCAGTAGCCACCCACG+TGG - chr1_1:28295499-28295518 None:intergenic 60.0%
TGCCTGCTTCTTTGCCCACC+AGG + chr1_1:28297212-28297231 Msa0017060:intron 60.0%
GCAAAGCCCTGAGTGGTTGC+AGG - chr1_1:28298330-28298349 None:intergenic 60.0%
CCACACTGCTTCCTGTTCCC+GGG - chr1_1:28300091-28300110 None:intergenic 60.0%
!! ATGGACTGGTACCCCTGGAG+AGG + chr1_1:28300140-28300159 Msa0017060:CDS 60.0%
AGGTGGAGGCCGCCTTATCA+AGG + chr1_1:28300238-28300257 Msa0017060:CDS 60.0%
GCCTCAGGAGCCCTTCTAGA+GGG - chr1_1:28300940-28300959 None:intergenic 60.0%
TAGAAGGGCTCCTGAGGCCT+AGG + chr1_1:28300942-28300961 Msa0017060:intron 60.0%
! GCCTAGGCGCGCCCTTTTTA+GGG + chr1_1:28300958-28300977 Msa0017060:intron 60.0%
! CCCCAAGGAAGCTGGGCTTT+TGG - chr1_1:28301031-28301050 None:intergenic 60.0%
!! CTTGAGAGTGCTCCCAAGGG+TGG - chr1_1:28301096-28301115 None:intergenic 60.0%
!! CACCCTTGGGAGCACTCTCA+AGG + chr1_1:28301094-28301113 Msa0017060:intron 60.0%
! GGAATCACGGCGGATTCAGC+AGG - chr1_1:28302561-28302580 None:intergenic 60.0%
TGGCCACCCCCGATGACTAT+AGG + chr1_1:28304849-28304868 Msa0017060:CDS 60.0%
GAGCCTATAGTCATCGGGGG+TGG - chr1_1:28304855-28304874 None:intergenic 60.0%
!! CACACTCGGTGTGCGTGTGG+CGG + chr1_1:28287434-28287453 Msa0017060:five_prime_UTR 65.0%
!! ACACTCGGTGTGCGTGTGGC+GGG + chr1_1:28287435-28287454 Msa0017060:five_prime_UTR 65.0%
! GTGTGGCGGGAAGAGTCCCT+CGG + chr1_1:28287448-28287467 Msa0017060:five_prime_UTR 65.0%
TGGCCGGTTGTGGACGAGGA+GGG - chr1_1:28288796-28288815 None:intergenic 65.0%
TTGGCCGGTTGTGGACGAGG+AGG - chr1_1:28288797-28288816 None:intergenic 65.0%
!! GGAGGGTGGGGCATTGGGTT+AGG + chr1_1:28291753-28291772 Msa0017060:intron 65.0%
!! GTGGGGCATTGGGTTAGGGG+AGG + chr1_1:28291758-28291777 Msa0017060:intron 65.0%
GGTGAAGGGGGGCTGTTGTG+GGG + chr1_1:28292940-28292959 Msa0017060:CDS 65.0%
GTCCCACGTGGGTGGCTACT+GGG + chr1_1:28295493-28295512 Msa0017060:CDS 65.0%
GGGCTAAAGCAGGCCCCTAC+AGG - chr1_1:28297912-28297931 None:intergenic 65.0%
CCCGGGAACAGGAAGCAGTG+TGG + chr1_1:28300088-28300107 Msa0017060:CDS 65.0%
! GCCCTCTAGAAGGGCTCCTG+AGG + chr1_1:28300936-28300955 Msa0017060:intron 65.0%
GGCCTCAGGAGCCCTTCTAG+AGG - chr1_1:28300941-28300960 None:intergenic 65.0%
! GGCCTAGGCGCGCCCTTTTT+AGG + chr1_1:28300957-28300976 Msa0017060:intron 65.0%
! GCCCTAAAAAGGGCGCGCCT+AGG - chr1_1:28300962-28300981 None:intergenic 65.0%
CGCCACACGCACACCGAGTG+TGG - chr1_1:28287436-28287455 None:intergenic 70.0%
!! GGGTTGGCCGGTTGTGGACG+AGG - chr1_1:28288800-28288819 None:intergenic 70.0%
CGTCCCACGTGGGTGGCTAC+TGG + chr1_1:28295492-28295511 Msa0017060:CDS 70.0%
GGCGGCCTCCACCTTCGTAG+TGG - chr1_1:28300232-28300251 None:intergenic 70.0%
! AAAGGGCGCGCCTAGGCCTC+AGG - chr1_1:28300955-28300974 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 28287405 28306096 28287405 ID=Msa0017060;Name=Msa0017060
chr1_1 mRNA 28287405 28306096 28287405 ID=Msa0017060-mRNA-1;Parent=Msa0017060;Name=Msa0017060-mRNA-1;_AED=0.13;_eAED=0.13;_QI=140|0.90|0.90|0.95|0.90|0.95|22|338|1121
chr1_1 exon 28287405 28287663 28287405 ID=Msa0017060-mRNA-1:exon:9476;Parent=Msa0017060-mRNA-1
chr1_1 exon 28288932 28288977 28288932 ID=Msa0017060-mRNA-1:exon:9477;Parent=Msa0017060-mRNA-1
chr1_1 exon 28289526 28289668 28289526 ID=Msa0017060-mRNA-1:exon:9478;Parent=Msa0017060-mRNA-1
chr1_1 exon 28290075 28290150 28290075 ID=Msa0017060-mRNA-1:exon:9479;Parent=Msa0017060-mRNA-1
chr1_1 exon 28290386 28290505 28290386 ID=Msa0017060-mRNA-1:exon:9480;Parent=Msa0017060-mRNA-1
chr1_1 exon 28291034 28291081 28291034 ID=Msa0017060-mRNA-1:exon:9481;Parent=Msa0017060-mRNA-1
chr1_1 exon 28291286 28291350 28291286 ID=Msa0017060-mRNA-1:exon:9482;Parent=Msa0017060-mRNA-1
chr1_1 exon 28291523 28291608 28291523 ID=Msa0017060-mRNA-1:exon:9483;Parent=Msa0017060-mRNA-1
chr1_1 exon 28292340 28292504 28292340 ID=Msa0017060-mRNA-1:exon:9484;Parent=Msa0017060-mRNA-1
chr1_1 exon 28292917 28293026 28292917 ID=Msa0017060-mRNA-1:exon:9485;Parent=Msa0017060-mRNA-1
chr1_1 exon 28293140 28293245 28293140 ID=Msa0017060-mRNA-1:exon:9486;Parent=Msa0017060-mRNA-1
chr1_1 exon 28293319 28293394 28293319 ID=Msa0017060-mRNA-1:exon:9487;Parent=Msa0017060-mRNA-1
chr1_1 exon 28294159 28294217 28294159 ID=Msa0017060-mRNA-1:exon:9488;Parent=Msa0017060-mRNA-1
chr1_1 exon 28294368 28294435 28294368 ID=Msa0017060-mRNA-1:exon:9489;Parent=Msa0017060-mRNA-1
chr1_1 exon 28295366 28295539 28295366 ID=Msa0017060-mRNA-1:exon:9490;Parent=Msa0017060-mRNA-1
chr1_1 exon 28299694 28299900 28299694 ID=Msa0017060-mRNA-1:exon:9491;Parent=Msa0017060-mRNA-1
chr1_1 exon 28300003 28300259 28300003 ID=Msa0017060-mRNA-1:exon:9492;Parent=Msa0017060-mRNA-1
chr1_1 exon 28300368 28300511 28300368 ID=Msa0017060-mRNA-1:exon:9493;Parent=Msa0017060-mRNA-1
chr1_1 exon 28301480 28301537 28301480 ID=Msa0017060-mRNA-1:exon:9494;Parent=Msa0017060-mRNA-1
chr1_1 exon 28302351 28302650 28302351 ID=Msa0017060-mRNA-1:exon:9495;Parent=Msa0017060-mRNA-1
chr1_1 exon 28304198 28304926 28304198 ID=Msa0017060-mRNA-1:exon:9496;Parent=Msa0017060-mRNA-1
chr1_1 exon 28305549 28306096 28305549 ID=Msa0017060-mRNA-1:exon:9497;Parent=Msa0017060-mRNA-1
chr1_1 five_prime_UTR 28287405 28287544 28287405 ID=Msa0017060-mRNA-1:five_prime_utr;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28287545 28287663 28287545 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28288932 28288977 28288932 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28289526 28289668 28289526 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28290075 28290150 28290075 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28290386 28290505 28290386 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28291034 28291081 28291034 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28291286 28291350 28291286 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28291523 28291608 28291523 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28292340 28292504 28292340 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28292917 28293026 28292917 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28293140 28293245 28293140 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28293319 28293394 28293319 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28294159 28294217 28294159 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28294368 28294435 28294368 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28295366 28295539 28295366 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28299694 28299900 28299694 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28300003 28300259 28300003 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28300368 28300511 28300368 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28301480 28301537 28301480 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28302351 28302650 28302351 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28304198 28304926 28304198 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 CDS 28305549 28305758 28305549 ID=Msa0017060-mRNA-1:cds;Parent=Msa0017060-mRNA-1
chr1_1 three_prime_UTR 28305759 28306096 28305759 ID=Msa0017060-mRNA-1:three_prime_utr;Parent=Msa0017060-mRNA-1
Gene Sequence

>Msa0017060

ATGTACAAGCTAGCTACTTCTCGAAACGTCGTCGTTTTCTTCCCTCGCTTTCGTTCCCTTTCTCTTTTCCGGAATTCTCCTTCTCCTCCTTCTTCCTTCATTCCCTCTCGTTTCCTCAGTTTTTTGTTACTGCGACAAAATGTACCAACCATTTTCTTGGCTATCAAAACCTTACTTTCTTTTTCTTGTTTCCTTTCCAAACTATGGCAGGAGTTGCAGATGTGCAAAAAACCCTCAACAATGAATCTAATTGAAAGGCTTGAATACTCAAATTTGCTTGGCATAGATTCTAACTTGAAGAATGGAAGTCTGAAGGCAGGAACACTTAACTGTGACATATTGCAGTTCAAGTCGCAATTTCCACGTCAAGTTTTACTCTGCAGGGTTGGAGACTTCTATGAAACTCTTGGGATAGACGCTTGTATTCTAGTTGAATATGCGGGTTTAAATCCCTTTGGCGGTCTACGATCAGATAGCATCCCCAGAGCTGGTTGCCCTGTTGTGAATCTTAGGCAAACTTTGGATGATCTTACACGCAATGGTTATTCAGTGTGTATTGTGGAGGAAGTTCAAGGCCCAGCTCAAGCTCGAACCAAGAAACGTCGTTTTATATCTGGGCATGCTCATCCAGGAAACCCCTATGTATATGGACTTATTGGGGCTGATCATGATATTGACTTTCCAGAACCTATGCCTGTAGTAGGAATTTCTCATTCGGCAAGGGGGTACTGCATAAATATGGTCCTAGAGACCATGAAGACGTATTCTTCAGAAGATTGCTTGACAGAAGAAGCAGTTGTTACAAAGCTTCGAACTTGTCAATACCATCACTTATTTCTGCATACATCTTTGAGGAGGAATTCTTGTGGAACGTCCAAGTGGGCAGAATTTGGTGAAGGGGGGCTGTTGTGGGGAGAATGTAGTTCCAGACATTCTGAATGGTTTGATGGCGACCCTGTTTCTGATCTTTTGGTCAAGGTAAAGGAGCTCTATGGTCTTGATCATGAGGTTCTGTTTCGTAACGTAACCGTGTCTTCGGGAAATAGGGCTCAACCTTTAACTCTTGGAACATCTACTCAAATTGGTGTCATTCCAACGGATGGAATACCTTCTTTGTTGAAGGTCTTACTTCCACCACATTGCAGTGGATTACCAATATTGTATGTTAGGGATCTTCTTTTGAACCCTCCTTCTTATGAGATTGCATCCAAAATTCAAGCAACATGTAGACTTATGAGCAGTGTAACATGCTCAATTCCGGAATTTACGTGTGTTTCTTCAGCAAAGATTGCTAAGCTACTTGAATGGAAGGAGGCCAATCATATTGAACTTTGTAGAATAAAGAATGTGCTAGATGAAATATTGCACATGTACAGAAAACCTGAGCTCAATGAAATATTGAAACATTTAATTCGTCCCACGTGGGTGGCTACTGGGTTAGACATTGACTTCAAAACCTTGGTTGCTGGATGTGAAGTTGCATCGCGTAAGGTTGACGAAGTGATATCTCTGGATGGTGAGACAGATCAGAAAGTCAGTTCCTTCTCTGCTATTCCTGATGAATTTTTTGAGAATATGGAGTCTGTATGGAAAGGTCGAATAAAAACAATCCACATAAATGATGTGCTTACTTCCGTGGACAAAGCAGCTGAGGACTTGAATTTAGCAGTCACTGAAGATTTCACTCCTGTAGTTTCTAGAATAAAAGCTTCCATGTCTCAACTTAGAGCTCCTAAGGGAGAAATATCTTATTCCCGGGAACAGGAAGCAGTGTGGTTCAAGGGTAAACGCTTTATACCAAATATATGGACTGGTACCCCTGGAGAGGAACAAATTAAACATCTTAAACATGCTTTAGATTCTAAAGGTAGAAAGGTAGGTGAGGAATGGTTTACCACTACGAAGGTGGAGGCCGCCTTATCAAGGTACCATGAAGCAAATGTCAAGGCAAACACTAGAGTTTTGGAACTTTTAAGGGGACTTGCTGCTGAATTGCAATCCCATATAAACATCATTGTTTTTTCTTCCACATTGCTTGTGATTACCAAAGCGTTATATGCTCATGTGAGTGAAGGGAGAAGAAGGAAATGGGTTTTTCCTACATTAGTAGAATCCCAGAAGCTTGAGGATGGGATGCCATCCGATAAAAATCGCAAGATGAAGATAGTTGGTTTATTACCATATTGGTTCAACATAGCAGAAGGAGGCGCTGTGCTTAATACTGTTGATATGCAATCATTATTTCTATTGACAGGACCAAATGGTGGTGGTAAATCAAGTTTACTTCGGTCAATTTGTGCTGCTGCACTACTTGGGATATGTGGACTTATGGTTCCTGCTGAATCCGCCGTGATTCCCTATTTTGACTCTATCATGCTACATATGAAGTCATATGATAGTCCAGCTGATGACAAAAGTTCATTTCAGGTGGAGATGTCCGAACTTCGATCCATCATTGCTGGAACCACCGAAAGGAGCCTTGTGCTTGTTGATGAAATATGCCGAGGAACAGAGACTGCAAAAGGGACTTGCATTGCAGGCAGCATCATTGAAACTCTTGATAGAAGTGGCTGTTTGGGGATTGTGTCTACTCACTTGCATGATATATTTACCTTGCCACTAAACATCAAGAACACTGTACACAAAGCAATGGGCACAACTTGCATTGATGGACAAACAAAACCTACTTGGATGCTGCAAGATGGAGTTTGTAAAGAAAGTCTTGCTTTTGAAACTGCCAAGAGGGAAGGAATTCCTGAGATTGTTATCCAAAGAGCTGAAGATCTTTATCTGTCAGTTTATGCTAAGAAAACGCTTTCTGCAGAAAACTATGCCAAACAGGAAGAATTGTCTAGTTACATCAATGGTAATAATTCTAATGGGACACATCATTCCGAAAAGTTTTTATCAGGAATTTCTCACGAGGGAATCTCTTTAGCGAATCCAATTGAAGTTTCACATAAGGAGGTTGAGAGTGCTATCACTGTAATCTGCCAAGATTTTATAGCAGAACTCCAAAGGAAAAAGATCGCATCAGATCTTATCAAGATAAAGTGTTTCTTAATTGGCACTAGGGAATGGCCACCCCCGATGACTATAGGCTCTTCAAGCGTCTACGTGATGCTCAGACCAGATAAGAAACTCTATATAGGAGAGACGGATAATCTCGAGGATCGAGTTCGTGCACATCGATCGAAAGAAGGGATGCAGAATGCATCATTCCTTTATTTCCTAGTTCCAGGAAAAAGCCTAGCCTGCCAAATAGAAACTCTGCTAATCAACCAACTTCCGAATCGAGGCTTCCTGTTAAGCAATATAGCTGATGGTAAGCATCGGAATTTTGGCACATCCAACGTTTACGCGTAA
Protein sequence

>Msa0017060

MYKLATSRNVVVFFPRFRSLSLFRNSPSPPSSFIPSRFLSFLLLRQNVPTIFLAIKTLLSFSCFLSKLWQELQMCKKPSTMNLIERLEYSNLLGIDSNLKNGSLKAGTLNCDILQFKSQFPRQVLLCRVGDFYETLGIDACILVEYAGLNPFGGLRSDSIPRAGCPVVNLRQTLDDLTRNGYSVCIVEEVQGPAQARTKKRRFISGHAHPGNPYVYGLIGADHDIDFPEPMPVVGISHSARGYCINMVLETMKTYSSEDCLTEEAVVTKLRTCQYHHLFLHTSLRRNSCGTSKWAEFGEGGLLWGECSSRHSEWFDGDPVSDLLVKVKELYGLDHEVLFRNVTVSSGNRAQPLTLGTSTQIGVIPTDGIPSLLKVLLPPHCSGLPILYVRDLLLNPPSYEIASKIQATCRLMSSVTCSIPEFTCVSSAKIAKLLEWKEANHIELCRIKNVLDEILHMYRKPELNEILKHLIRPTWVATGLDIDFKTLVAGCEVASRKVDEVISLDGETDQKVSSFSAIPDEFFENMESVWKGRIKTIHINDVLTSVDKAAEDLNLAVTEDFTPVVSRIKASMSQLRAPKGEISYSREQEAVWFKGKRFIPNIWTGTPGEEQIKHLKHALDSKGRKVGEEWFTTTKVEAALSRYHEANVKANTRVLELLRGLAAELQSHINIIVFSSTLLVITKALYAHVSEGRRRKWVFPTLVESQKLEDGMPSDKNRKMKIVGLLPYWFNIAEGGAVLNTVDMQSLFLLTGPNGGGKSSLLRSICAAALLGICGLMVPAESAVIPYFDSIMLHMKSYDSPADDKSSFQVEMSELRSIIAGTTERSLVLVDEICRGTETAKGTCIAGSIIETLDRSGCLGIVSTHLHDIFTLPLNIKNTVHKAMGTTCIDGQTKPTWMLQDGVCKESLAFETAKREGIPEIVIQRAEDLYLSVYAKKTLSAENYAKQEELSSYINGNNSNGTHHSEKFLSGISHEGISLANPIEVSHKEVESAITVICQDFIAELQRKKIASDLIKIKCFLIGTREWPPPMTIGSSSVYVMLRPDKKLYIGETDNLEDRVRAHRSKEGMQNASFLYFLVPGKSLACQIETLLINQLPNRGFLLSNIADGKHRNFGTSNVYA*