AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1429390


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1429390 MtrunA17_Chr3g0133261 98.527 543 5 2 1 541 1 542 0.0 1102
Msa1429390 MtrunA17_Chr7g0270811 40.909 484 271 6 67 541 52 529 1.12e-135 404
Msa1429390 MtrunA17_Chr3g0143341 36.000 525 284 7 62 541 6 523 7.74e-115 350
Msa1429390 MtrunA17_Chr3g0143331 33.114 456 203 9 80 493 6 401 1.09e-77 250
Msa1429390 MtrunA17_Chr3g0096421 34.796 319 192 5 232 541 8 319 5.66e-57 193
Msa1429390 MtrunA17_Chr3g0096431 38.849 139 85 0 62 200 12 150 2.76e-33 124
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1429390 AT5G52520.1 81.111 540 100 2 3 541 5 543 0.0 900
Msa1429390 AT3G62120.3 40.909 484 270 8 67 541 41 517 2.57e-129 387
Msa1429390 AT3G62120.2 40.909 484 270 8 67 541 54 530 5.81e-129 387
Msa1429390 AT3G62120.1 40.909 484 270 8 67 541 54 530 5.81e-129 387
Msa1429390 AT5G10880.1 36.245 229 125 5 327 541 88 309 1.73e-30 121

Find 166 sgRNAs with CRISPR-Local

Find 438 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTAATAATATGATTTA+TGG 0.079203 tig0026500:-42149 Msa1429390:three_prime_UTR
CTCTATGGAGCCTTCAATTT+TGG 0.135831 tig0026500:-43023 Msa1429390:CDS
CTGGATGGAAATTCAATTTC+TGG 0.137157 tig0026500:-43290 Msa1429390:CDS
CGCCATTTGGGAAGCCATTC+AGG 0.220881 tig0026500:-47765 Msa1429390:intron
TCATCATCCTTCTTCCAAAT+TGG 0.238394 tig0026500:+43408 None:intergenic
CGAGATACAGTCTTCTCTTT+TGG 0.245617 tig0026500:-42975 Msa1429390:CDS
TTAGAACTCTTGAATTTCTT+TGG 0.246752 tig0026500:-46163 Msa1429390:CDS
GGCCTCTGCTGCAGTGGTTT+TGG 0.247674 tig0026500:+47946 None:intergenic
ACTTGCTTCTTTCTCTATAA+AGG 0.261830 tig0026500:+46654 None:intergenic
CAAAGGCACGGGAAAAGTTT+TGG 0.265297 tig0026500:+45827 None:intergenic
ACTTTCGTCCCTTTGCTCTA+AGG 0.265320 tig0026500:+41909 None:intergenic
CGAGTTGTCGACTCGGTCTT+TGG 0.269239 tig0026500:+47925 None:intergenic
CTTGCAGAGTTAGTAAGATT+TGG 0.279485 tig0026500:+42191 None:intergenic
GTCCCTATGGTTACGCCATT+TGG 0.281205 tig0026500:-47778 Msa1429390:CDS
ATGGACAAAGGGAATATATT+TGG 0.290677 tig0026500:-44695 Msa1429390:CDS
ACTTAGGCAAAAGTTGTATA+AGG 0.293929 tig0026500:-42064 Msa1429390:three_prime_UTR
ACCTGTATCGGTGCAATCTT+TGG 0.300338 tig0026500:+44591 None:intergenic
GTTCCTCTTAGAATTGAAAT+TGG 0.310395 tig0026500:-43124 Msa1429390:CDS
CGGCGGTGGCGGAGAATGAT+TGG 0.327896 tig0026500:+47992 None:intergenic
TTTCTAATAATATGATTTAT+GGG 0.331996 tig0026500:-42148 Msa1429390:three_prime_UTR
ATCCCTTGTGGCTGTTCAAA+TGG 0.354235 tig0026500:+42264 None:intergenic
GGGCAATTGCATTTCGAGAT+AGG 0.356660 tig0026500:-42949 Msa1429390:intron
AGGTGGTAATTGTACCAATT+TGG 0.362681 tig0026500:-43422 Msa1429390:CDS
CAAGGGGCCCTTGGTCTGCT+AGG 0.366722 tig0026500:-42461 Msa1429390:intron
AGCTGCCATACCTGTTATTA+CGG 0.369384 tig0026500:-45959 Msa1429390:CDS
CTTGAATTTCTTTGGCAAGA+AGG 0.374606 tig0026500:-46155 Msa1429390:CDS
AACACTTTCCCTTGCTTCCC+AGG 0.380427 tig0026500:+43052 None:intergenic
GTGCAGTTCACAGATGAAAA+TGG 0.386375 tig0026500:-44714 Msa1429390:intron
GGCGGTGGCGGAGAATGATT+GGG 0.387864 tig0026500:+47993 None:intergenic
TCTTCCTCTCTTGATTAATC+AGG 0.388403 tig0026500:-46326 Msa1429390:intron
TCCCTATGGTTACGCCATTT+GGG 0.391559 tig0026500:-47777 Msa1429390:CDS
TCCAAAGATTGCACCGATAC+AGG 0.393092 tig0026500:-44592 Msa1429390:intron
TTCACAATGGTTTCACTTGT+AGG 0.397403 tig0026500:+46385 None:intergenic
GAAAGTGTTTGGAATCTCTA+TGG 0.397700 tig0026500:-43038 Msa1429390:CDS
AGGAAACTGGAGCAACTATC+AGG 0.398901 tig0026500:-42293 Msa1429390:CDS
CTGCAATATCACAAGGCAAA+TGG 0.399141 tig0026500:-42485 Msa1429390:CDS
CAATCTTTGGAGGAAGCATT+AGG 0.399281 tig0026500:+44604 None:intergenic
AGTTAGCAGTAGTGACAATT+GGG 0.403138 tig0026500:-46609 Msa1429390:CDS
AGCTTGTTCAAAAGCAAATC+TGG 0.405332 tig0026500:+45978 None:intergenic
ATTCAATTTCTGGGAAATGA+AGG 0.410990 tig0026500:-43280 Msa1429390:intron
CTTTCGTCCCTTTGCTCTAA+GGG 0.412454 tig0026500:+41910 None:intergenic
CGGACCGTAATCTGCTAATT+CGG 0.418329 tig0026500:+47823 None:intergenic
GCAAATGGGCAAGGGGCCCT+TGG 0.418567 tig0026500:-42470 Msa1429390:CDS
AATATATTTGGCAGACATCA+TGG 0.419041 tig0026500:-44683 Msa1429390:CDS
GGGAAGCAAGGGAAAGTGTT+TGG 0.420165 tig0026500:-43049 Msa1429390:CDS
TTAAAAGTGAAAGAGGAAAC+TGG 0.421097 tig0026500:-42306 Msa1429390:CDS
CAGAAATTGAATTTCCATCC+AGG 0.425508 tig0026500:+43291 None:intergenic
ATAACCATTGTACCGCGAAC+CGG 0.425988 tig0026500:+47803 None:intergenic
TGGATGGAAATTCAATTTCT+GGG 0.428325 tig0026500:-43289 Msa1429390:CDS
ACATACACCTCCAAAATTGA+AGG 0.437424 tig0026500:+43013 None:intergenic
TGCAATATCACAAGGCAAAT+GGG 0.439132 tig0026500:-42484 Msa1429390:CDS
AATTCAAGAGTTCTAACAAA+TGG 0.442257 tig0026500:+46170 None:intergenic
GAGTTAGCAGTAGTGACAAT+TGG 0.442737 tig0026500:-46610 Msa1429390:CDS
TAATAATATGATTTATGGGT+GGG 0.449328 tig0026500:-42144 Msa1429390:three_prime_UTR
AATGTCAAGTTCAAGGAGAC+TGG 0.459172 tig0026500:-47642 Msa1429390:CDS
TCTAAAGTGGAAACATTTGC+TGG 0.460420 tig0026500:-45928 Msa1429390:CDS
TGAAAGGTTGGTGACGGCGG+TGG 0.462451 tig0026500:+47978 None:intergenic
TGGCGGAGAAGGTGAAAGGT+TGG 0.466244 tig0026500:+47966 None:intergenic
GTGGAAGTGTGGTGATATCC+AGG 0.467177 tig0026500:-43084 Msa1429390:CDS
ATTAAAAGATGTTTGATGAC+AGG 0.474053 tig0026500:-42243 Msa1429390:CDS
ACAATGGTTATTCGTCCCTA+TGG 0.476175 tig0026500:-47791 Msa1429390:CDS
CTAGGAGTGATGACTCGGTC+AGG 0.476493 tig0026500:+47890 None:intergenic
TCTTTCTCTATAAAGGAGTA+AGG 0.477392 tig0026500:+46661 None:intergenic
AGATGAGTTAAAAGTGAAAG+AGG 0.477450 tig0026500:-42313 Msa1429390:CDS
AATTGTACCAATTTGGAAGA+AGG 0.481601 tig0026500:-43415 Msa1429390:CDS
CTTCCCAGGAATATCTCTCC+TGG 0.482230 tig0026500:+43066 None:intergenic
CACAGATGAAAATGGACAAA+GGG 0.483190 tig0026500:-44706 Msa1429390:CDS
AAAGAAGCTCTTCAAAGCTC+TGG 0.483538 tig0026500:-43351 Msa1429390:CDS
GCTTGAACCCTTAGAGCAAA+GGG 0.484129 tig0026500:-41917 Msa1429390:three_prime_UTR
CACTTCCACTAGACACGTCC+CGG 0.484364 tig0026500:+43098 None:intergenic
TTATTTGAATGTCAAGTTCA+AGG 0.486269 tig0026500:-47649 Msa1429390:CDS
GTCTTTGGCCTCTGCTGCAG+TGG 0.486813 tig0026500:+47940 None:intergenic
AAGGTTGGTGACGGCGGTGG+CGG 0.488368 tig0026500:+47981 None:intergenic
AACCTGAATGGCTTCCCAAA+TGG 0.497397 tig0026500:+47763 None:intergenic
GCAGATTACGGTCCGGTTCG+CGG 0.498963 tig0026500:-47815 Msa1429390:CDS
GCTGCCATACCTGTTATTAC+GGG 0.500792 tig0026500:-45958 Msa1429390:CDS
TGAGAAATTGCTGTTGTTGA+GGG 0.506381 tig0026500:+48022 None:intergenic
GGACCAATTTCAATTCTAAG+AGG 0.507990 tig0026500:+43121 None:intergenic
CTACACGATTGAGGCAATGA+TGG 0.509021 tig0026500:-45893 Msa1429390:CDS
GAGGAAGATCACGGTAGCTA+TGG 0.509612 tig0026500:+46341 None:intergenic
GACTCAGATCAAAGAACCCC+TGG 0.510899 tig0026500:-43309 Msa1429390:CDS
AAAGAAGCAAGTCATGTTGA+GGG 0.511967 tig0026500:-46643 Msa1429390:CDS
CGCCAAAACCACTGCAGCAG+AGG 0.513327 tig0026500:-47948 Msa1429390:CDS
AAAATAGCCACTTCTTCAGC+AGG 0.513654 tig0026500:+42216 None:intergenic
CTTAGGCAAAAGTTGTATAA+GGG 0.514326 tig0026500:-42063 Msa1429390:three_prime_UTR
AGAGATATTCCTGGGAAGCA+AGG 0.516068 tig0026500:-43061 Msa1429390:CDS
GGTGTATGTTAAAGACAAGT+TGG 0.524044 tig0026500:-42999 Msa1429390:CDS
TAGAATTGAAATTGGTCCCC+GGG 0.525862 tig0026500:-43116 Msa1429390:CDS
TTCCCAAATGGCGTAACCAT+AGG 0.529134 tig0026500:+47775 None:intergenic
AATGCCGAATTAGCAGATTA+CGG 0.529226 tig0026500:-47827 Msa1429390:CDS
CTGACCGAGTCATCACTCCT+AGG 0.534702 tig0026500:-47889 Msa1429390:CDS
GAGAAATTGCTGTTGTTGAG+GGG 0.535670 tig0026500:+48023 None:intergenic
GCATTGAAGTCCTGTGACCT+AGG 0.538432 tig0026500:+47872 None:intergenic
TATCACAAGGCAAATGGGCA+AGG 0.539052 tig0026500:-42479 Msa1429390:CDS
TCGACCCGTAATAACAGGTA+TGG 0.539172 tig0026500:+45954 None:intergenic
TCCAGAAGAGGCAGAAAATG+AGG 0.539198 tig0026500:-46114 Msa1429390:intron
GTAATCTGCTAATTCGGCAT+TGG 0.539992 tig0026500:+47829 None:intergenic
TGCTTGAACCCTTAGAGCAA+AGG 0.540304 tig0026500:-41918 Msa1429390:three_prime_UTR
TCCCAAATGGCGTAACCATA+GGG 0.541410 tig0026500:+47776 None:intergenic
TTGGAGAAGAGTGAAAGAGG+AGG 0.544001 tig0026500:+48101 None:intergenic
AGAAATTGAATTTCCATCCA+GGG 0.544417 tig0026500:+43292 None:intergenic
AGAAATTGCTGTTGTTGAGG+GGG 0.546767 tig0026500:+48024 None:intergenic
TGTATCGGTGCAATCTTTGG+AGG 0.548894 tig0026500:+44594 None:intergenic
TACGGGTCGAAAATCTAAAG+TGG 0.549532 tig0026500:-45941 Msa1429390:CDS
GAAAGAAGCAAGTCATGTTG+AGG 0.549877 tig0026500:-46644 Msa1429390:CDS
AGTGGGCAAATGTCACAAGA+TGG 0.552413 tig0026500:-46208 Msa1429390:CDS
TTCCCGTGCCTTTGAAACAC+AGG 0.553524 tig0026500:-45818 Msa1429390:intron
GACAAGAAAGCATTGCAAGC+AGG 0.555118 tig0026500:-45868 Msa1429390:CDS
ATCACAAGGCAAATGGGCAA+GGG 0.555350 tig0026500:-42478 Msa1429390:CDS
GCATCAGACCTGTGTTTCAA+AGG 0.556209 tig0026500:+45810 None:intergenic
TGCTCATGCAACTCCAGAAG+AGG 0.559996 tig0026500:-46126 Msa1429390:CDS
TTAATTTCTTGTTACCACTT+AGG 0.560972 tig0026500:-42080 Msa1429390:three_prime_UTR
GCATCCAACCATACCTGTAT+CGG 0.561155 tig0026500:+44579 None:intergenic
AGACCTGTGTTTCAAAGGCA+CGG 0.561432 tig0026500:+45815 None:intergenic
GACCTGTGTTTCAAAGGCAC+GGG 0.565333 tig0026500:+45816 None:intergenic
GAGATATTCCTGGGAAGCAA+GGG 0.565396 tig0026500:-43060 Msa1429390:CDS
GGTCCCCGGGACGTGTCTAG+TGG 0.566931 tig0026500:-43103 Msa1429390:CDS
CTAATAATATGATTTATGGG+TGG 0.568766 tig0026500:-42145 Msa1429390:three_prime_UTR
GGAGGCATCATCATGGTACA+TGG 0.569062 tig0026500:-44639 Msa1429390:CDS
GAAATTGAATTTCCATCCAG+GGG 0.569742 tig0026500:+43293 None:intergenic
CAATGGTTTCACTTGTAGGT+CGG 0.569797 tig0026500:+46389 None:intergenic
TTAGAATTGAAATTGGTCCC+CGG 0.570679 tig0026500:-43117 Msa1429390:CDS
ACTTCCACTAGACACGTCCC+GGG 0.571135 tig0026500:+43099 None:intergenic
ATATCCAGGAGAGATATTCC+TGG 0.571372 tig0026500:-43070 Msa1429390:CDS
AGGAGATCCTGCTGAAGAAG+TGG 0.571589 tig0026500:-42223 Msa1429390:CDS
GTGGGCAAATGTCACAAGAT+GGG 0.573271 tig0026500:-46207 Msa1429390:CDS
GCAGGAACCAGCCACAACCT+TGG 0.576341 tig0026500:-45850 Msa1429390:CDS
GTGAGAAATTGCTGTTGTTG+AGG 0.578924 tig0026500:+48021 None:intergenic
ATATATTTGGCAGACATCAT+GGG 0.579832 tig0026500:-44682 Msa1429390:CDS
CGGTCCGGTTCGCGGTACAA+TGG 0.585347 tig0026500:-47807 Msa1429390:CDS
TTTACCTGATTAATCAAGAG+AGG 0.586404 tig0026500:+46322 None:intergenic
AGTCATCACTCCTAGGTCAC+AGG 0.587801 tig0026500:-47882 Msa1429390:CDS
GAGGTAGAGAGAGTGAGATG+AGG 0.589946 tig0026500:+48120 None:intergenic
ATTGTCACTACTGCTAACTC+TGG 0.591910 tig0026500:+46613 None:intergenic
CAGATCAAAGAACCCCTGGA+TGG 0.591928 tig0026500:-43305 Msa1429390:CDS
TATCCAGGAGAGATATTCCT+GGG 0.592768 tig0026500:-43069 Msa1429390:CDS
TACACGATTGAGGCAATGAT+GGG 0.595098 tig0026500:-45892 Msa1429390:CDS
CGAATTAGCAGATTACGGTC+CGG 0.596537 tig0026500:-47822 Msa1429390:CDS
TCACAAGGCAAATGGGCAAG+GGG 0.599892 tig0026500:-42477 Msa1429390:CDS
CTTAAATCTGCAATATCACA+AGG 0.602226 tig0026500:-42492 Msa1429390:CDS
TCACAGATGAAAATGGACAA+AGG 0.608406 tig0026500:-44707 Msa1429390:CDS
AGAAGGTGAAAGGTTGGTGA+CGG 0.610314 tig0026500:+47972 None:intergenic
TTCCATTTGAACAGCCACAA+GGG 0.611470 tig0026500:-42266 Msa1429390:CDS
TTTCCATTTGAACAGCCACA+AGG 0.612338 tig0026500:-42267 Msa1429390:CDS
CTTGAGAGACACCATTTGTG+TGG 0.613060 tig0026500:+48075 None:intergenic
TTGTAAGACCTACACGATTG+AGG 0.616283 tig0026500:-45902 Msa1429390:CDS
ATGGTACATGGAGATGATGC+TGG 0.617498 tig0026500:-44627 Msa1429390:CDS
GTGACCTAGGAGTGATGACT+CGG 0.622486 tig0026500:+47885 None:intergenic
GGCGGAGAATGATTGGGGAA+CGG 0.627567 tig0026500:+47999 None:intergenic
AACACAACCTAGCAGACCAA+GGG 0.628350 tig0026500:+42454 None:intergenic
AGTAAACATGTGATTCACAA+TGG 0.630715 tig0026500:+46372 None:intergenic
CATCATTGCCTCAATCGTGT+AGG 0.631552 tig0026500:+45894 None:intergenic
TAGGAGTGATGACTCGGTCA+GGG 0.637146 tig0026500:+47891 None:intergenic
TGAATCACATGTTTACTCAG+TGG 0.643424 tig0026500:-46366 Msa1429390:CDS
AGGTGAAAGGTTGGTGACGG+CGG 0.643459 tig0026500:+47975 None:intergenic
GATTCTTCGAGTTGTCGACT+CGG 0.646760 tig0026500:+47918 None:intergenic
AAACACAACCTAGCAGACCA+AGG 0.647106 tig0026500:+42453 None:intergenic
TAATCAAGAGAGGAAGATCA+CGG 0.658472 tig0026500:+46332 None:intergenic
GTTAGCAGTAGTGACAATTG+GGG 0.660405 tig0026500:-46608 Msa1429390:CDS
GGACGTGTCTAGTGGAAGTG+TGG 0.684037 tig0026500:-43095 Msa1429390:CDS
GCGGTGGCGGAGAATGATTG+GGG 0.684633 tig0026500:+47994 None:intergenic
GGAACTTGAAGAGAAGCTCG+TGG 0.700042 tig0026500:-46578 Msa1429390:intron
CTTCCACTAGACACGTCCCG+GGG 0.711499 tig0026500:+43100 None:intergenic
TATTTGGCAGACATCATGGG+CGG 0.711856 tig0026500:-44679 Msa1429390:CDS
TTAGCAGTAGTGACAATTGG+GGG 0.717559 tig0026500:-46607 Msa1429390:CDS
GGTCACAGGACTTCAATGCG+TGG 0.719791 tig0026500:-47868 Msa1429390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAATAAATAAATAAA+TGG + tig0026500:42360-42379 None:intergenic 0.0%
!! AAAAATTAATAAAAAAAATT+AGG + tig0026500:47186-47205 None:intergenic 0.0%
!!! AAGCAAAATTTAAAATTTAA+AGG + tig0026500:43135-43154 None:intergenic 10.0%
!! TTTCTAATAATATGATTTAT+GGG - tig0026500:47898-47917 Msa1429390:CDS 10.0%
!! CAAAAAAATTAAAGTAAAAC+AGG + tig0026500:42520-42539 None:intergenic 15.0%
!!! GTGTTATTAAATCAATTATA+TGG - tig0026500:42546-42565 Msa1429390:intron 15.0%
!!! TTATCTTTTAGAATCATATA+TGG - tig0026500:44312-44331 Msa1429390:intron 15.0%
!!! GTATAATTTTATGACTAATT+TGG + tig0026500:44697-44716 None:intergenic 15.0%
!! TGTATATTAGTAGAAAAATA+TGG + tig0026500:44783-44802 None:intergenic 15.0%
!! TCATAAGTTTCAATTTAAAT+TGG + tig0026500:44986-45005 None:intergenic 15.0%
!! AAAAATTGAGTTATATGATA+TGG + tig0026500:45087-45106 None:intergenic 15.0%
!!! ATATTATCCATTTTCTTTTA+TGG - tig0026500:45225-45244 Msa1429390:intron 15.0%
!!! TATTATCCATTTTCTTTTAT+GGG - tig0026500:45226-45245 Msa1429390:intron 15.0%
!! AATAGAGATATAATATATGA+TGG - tig0026500:45924-45943 Msa1429390:CDS 15.0%
!! TTAATCTTTACCAAATTATA+AGG - tig0026500:46388-46407 Msa1429390:CDS 15.0%
!! CTTTCTAATAATATGATTTA+TGG - tig0026500:47897-47916 Msa1429390:CDS 15.0%
!!! TTATTTAGTTTTGTTTGTGT+AGG - tig0026500:42373-42392 Msa1429390:intron 20.0%
!! TTTATCTTGTGTTAAAGAAA+TGG + tig0026500:42632-42651 None:intergenic 20.0%
!! CAACATAATCTTAAGTAAAA+AGG + tig0026500:43071-43090 None:intergenic 20.0%
!!! TTTTAAATTTTGCTTGTACT+TGG - tig0026500:43140-43159 Msa1429390:intron 20.0%
!!! TTTAAATTTTGCTTGTACTT+GGG - tig0026500:43141-43160 Msa1429390:intron 20.0%
!!! GGTAATGAAATTTTATGTTA+TGG + tig0026500:43319-43338 None:intergenic 20.0%
!! AGAAAAACAGTCATAAAAAA+AGG + tig0026500:43510-43529 None:intergenic 20.0%
!!! TGTTTTTCTTCACATATTAT+CGG - tig0026500:43521-43540 Msa1429390:intron 20.0%
!!! TTTGATTTTTCCATTTTTTG+AGG - tig0026500:43623-43642 Msa1429390:intron 20.0%
!!! AATATGAGATTTTTTTTCAC+CGG - tig0026500:44495-44514 Msa1429390:intron 20.0%
!! AAATATGGTCAAAATAAGTT+AGG + tig0026500:44768-44787 None:intergenic 20.0%
!! AAATGAATAAAAACAGAAGT+GGG + tig0026500:45198-45217 None:intergenic 20.0%
!! TAAATGAATAAAAACAGAAG+TGG + tig0026500:45199-45218 None:intergenic 20.0%
!!! ATTATCCATTTTCTTTTATG+GGG - tig0026500:45227-45246 Msa1429390:intron 20.0%
!!! TAATATATGATGGAAAATTG+AGG - tig0026500:45934-45953 Msa1429390:CDS 20.0%
!! TGAGAATCTTATAAAATGAA+AGG + tig0026500:46441-46460 None:intergenic 20.0%
!! TTTATAAGATTCTCATTTGA+AGG - tig0026500:46446-46465 Msa1429390:intron 20.0%
!! TTATAAGATTCTCATTTGAA+GGG - tig0026500:46447-46466 Msa1429390:intron 20.0%
!! TATATTCAGATAGTCAAATA+TGG + tig0026500:46870-46889 None:intergenic 20.0%
!!! TATTTTTTTCTTCCAATTTC+AGG - tig0026500:46897-46916 Msa1429390:intron 20.0%
!!! ATTTTTTTCTTCCAATTTCA+GGG - tig0026500:46898-46917 Msa1429390:intron 20.0%
!! TAATAATATGATTTATGGGT+GGG - tig0026500:47902-47921 Msa1429390:CDS 20.0%
! AATGGCAAAATGAAAATTGA+AGG + tig0026500:42342-42361 None:intergenic 25.0%
! TTATTTGAATGTCAAGTTCA+AGG - tig0026500:42397-42416 Msa1429390:intron 25.0%
! ATAAGTTGTTTATCCAAACA+AGG + tig0026500:42572-42591 None:intergenic 25.0%
!!! ACTTATTTTGCAGCTTATAT+AGG - tig0026500:42586-42605 Msa1429390:intron 25.0%
! TTTGTAGTGTAAGAATATGA+GGG - tig0026500:43251-43270 Msa1429390:intron 25.0%
!!! AAAGTGATATCTTGATAATG+TGG - tig0026500:43280-43299 Msa1429390:intron 25.0%
!! GTTTTTCTTCACATATTATC+GGG - tig0026500:43522-43541 Msa1429390:intron 25.0%
! AAAATCAAAGACAAAACCTT+AGG + tig0026500:43612-43631 None:intergenic 25.0%
!! AATTCAAGAGTTCTAACAAA+TGG + tig0026500:43879-43898 None:intergenic 25.0%
! TTAGAACTCTTGAATTTCTT+TGG - tig0026500:43883-43902 Msa1429390:intron 25.0%
! AAGAAAAAAAAATACTCCAC+AGG + tig0026500:44288-44307 None:intergenic 25.0%
!!! TTTTTTTCTTCTGTGAGTTA+TGG - tig0026500:44404-44423 Msa1429390:intron 25.0%
! TTAAGCTCAAAATTATGCAT+TGG - tig0026500:44904-44923 Msa1429390:intron 25.0%
! AATGAATAAAAACAGAAGTG+GGG + tig0026500:45197-45216 None:intergenic 25.0%
!! ATTTCTCTTGTAGTTTTTCT+AGG + tig0026500:45873-45892 None:intergenic 25.0%
! TTTCATACATAACATCCAAT+AGG - tig0026500:46046-46065 Msa1429390:intron 25.0%
! TTACATGCAAAATGATTTCA+TGG + tig0026500:46199-46218 None:intergenic 25.0%
! AACTTCAGTTAGAGTATATT+CGG - tig0026500:46309-46328 Msa1429390:intron 25.0%
! TCATAGCATTCCTTATAATT+TGG + tig0026500:46401-46420 None:intergenic 25.0%
! TATATTTGGATGTAGAAGTT+TGG + tig0026500:46513-46532 None:intergenic 25.0%
! AAACTTCTACATCCAAATAT+AGG - tig0026500:46512-46531 Msa1429390:intron 25.0%
! CATGTAAACTATCCTATATT+TGG + tig0026500:46527-46546 None:intergenic 25.0%
!! ACTTGGATAGATTTCATTTT+TGG - tig0026500:46800-46819 Msa1429390:intron 25.0%
!!! CTTGGATAGATTTCATTTTT+GGG - tig0026500:46801-46820 Msa1429390:intron 25.0%
!!! CAAGTAAAAAGTATCACAAA+AGG + tig0026500:47129-47148 None:intergenic 25.0%
!! TTTTACTTGTGATAGACATT+TGG - tig0026500:47140-47159 Msa1429390:intron 25.0%
! AAGACTAGAATATATCATTC+AGG + tig0026500:47224-47243 None:intergenic 25.0%
!!! CTTCTGAAAAGTATTTAACT+AGG + tig0026500:47258-47277 None:intergenic 25.0%
!! CTAGTTAAATACTTTTCAGA+AGG - tig0026500:47256-47275 Msa1429390:intron 25.0%
! ATTTAGTGTATTACATAGAG+TGG + tig0026500:47313-47332 None:intergenic 25.0%
! AATTCCAATCTCTATTAGAA+AGG - tig0026500:47375-47394 Msa1429390:intron 25.0%
! ATTTCCTTTCTAATAGAGAT+TGG + tig0026500:47382-47401 None:intergenic 25.0%
! CTATTAGAAAGGAAATCAAT+TGG - tig0026500:47386-47405 Msa1429390:intron 25.0%
!! ATTAAAAGATGTTTGATGAC+AGG - tig0026500:47803-47822 Msa1429390:CDS 25.0%
! CTAATAATATGATTTATGGG+TGG - tig0026500:47901-47920 Msa1429390:CDS 25.0%
! TTAATTTCTTGTTACCACTT+AGG - tig0026500:47966-47985 Msa1429390:CDS 25.0%
AGAAAAAGAATGAACCTGAA+TGG + tig0026500:42298-42317 None:intergenic 30.0%
! TAGTAACATGTATTTTCCAC+AGG - tig0026500:42430-42449 Msa1429390:intron 30.0%
TGGTAATTAATGTTTACCTG+TGG + tig0026500:42449-42468 None:intergenic 30.0%
! TATCTGCAATTTGTTTGCAT+AGG - tig0026500:42489-42508 Msa1429390:CDS 30.0%
!! ATCAATTATATGGCCTTGTT+TGG - tig0026500:42556-42575 Msa1429390:intron 30.0%
TAAGCTATCCTAGTGAATTT+AGG - tig0026500:42680-42699 Msa1429390:intron 30.0%
AAGCTATCCTAGTGAATTTA+GGG - tig0026500:42681-42700 Msa1429390:intron 30.0%
CTTATTTCCCTAAATTCACT+AGG + tig0026500:42691-42710 None:intergenic 30.0%
AATATCTGATCTGACACTAT+GGG + tig0026500:42827-42846 None:intergenic 30.0%
AACGTCGAAAAAATTAAGCT+AGG + tig0026500:42850-42869 None:intergenic 30.0%
ACAATAAAAAAAGGGTAACC+CGG + tig0026500:42983-43002 None:intergenic 30.0%
CTACAAACAGTACAAGATAT+AGG + tig0026500:43238-43257 None:intergenic 30.0%
GTTTGTAGTGTAAGAATATG+AGG - tig0026500:43250-43269 Msa1429390:intron 30.0%
TCTTTCTCTATAAAGGAGTA+AGG + tig0026500:43388-43407 None:intergenic 30.0%
ACTTGCTTCTTTCTCTATAA+AGG + tig0026500:43395-43414 None:intergenic 30.0%
AGTAAACATGTGATTCACAA+TGG + tig0026500:43677-43696 None:intergenic 30.0%
TTTACCTGATTAATCAAGAG+AGG + tig0026500:43727-43746 None:intergenic 30.0%
TTCATTCAACAGGAAAAAAC+AGG + tig0026500:43810-43829 None:intergenic 30.0%
!!! GTTTTTTCCTGTTGAATGAA+CGG - tig0026500:43810-43829 Msa1429390:intron 30.0%
!!! TTTTTTCCTGTTGAATGAAC+GGG - tig0026500:43811-43830 Msa1429390:intron 30.0%
TAGTAACAAATAAGAAGTCG+TGG + tig0026500:44436-44455 None:intergenic 30.0%
!! TTACTGAAACTTTGAGTTGA+CGG + tig0026500:44477-44496 None:intergenic 30.0%
!!! GCTGTTTTTCTGTAAATAAG+AGG - tig0026500:44543-44562 Msa1429390:intron 30.0%
! GTTTTTCTGTAAATAAGAGG+AGG - tig0026500:44546-44565 Msa1429390:intron 30.0%
ACAACAATCCTTCCTAAAAT+AGG - tig0026500:44624-44643 Msa1429390:CDS 30.0%
!! TTGGATTTCCTATTTTAGGA+AGG + tig0026500:44635-44654 None:intergenic 30.0%
! CTAGTTGGATTTCCTATTTT+AGG + tig0026500:44639-44658 None:intergenic 30.0%
! GTTTTTGTACAAGTGATAGT+AGG + tig0026500:44663-44682 None:intergenic 30.0%
TTCAAATGAGTCATCTATTG+CGG + tig0026500:44730-44749 None:intergenic 30.0%
TCAACTGTGTCATGTATTAA+GGG - tig0026500:44941-44960 Msa1429390:intron 30.0%
GCTTGGATTTATCATAAGTA+GGG + tig0026500:45051-45070 None:intergenic 30.0%
ATGATATGGCACAATCAATA+TGG + tig0026500:45073-45092 None:intergenic 30.0%
TTGATTAAATCCTTTCAACG+AGG - tig0026500:45284-45303 Msa1429390:intron 30.0%
ATGGACAAAGGGAATATATT+TGG - tig0026500:45351-45370 Msa1429390:intron 30.0%
AATATATTTGGCAGACATCA+TGG - tig0026500:45363-45382 Msa1429390:intron 30.0%
ATATATTTGGCAGACATCAT+GGG - tig0026500:45364-45383 Msa1429390:intron 30.0%
CATGTGTAGATATCTTTGTT+AGG - tig0026500:45505-45524 Msa1429390:intron 30.0%
TTACATTACTTGTCTGATCA+AGG + tig0026500:45567-45586 None:intergenic 30.0%
!! AGATTTGCTACACAAGAATA+TGG - tig0026500:45586-45605 Msa1429390:intron 30.0%
!! GATTTGCTACACAAGAATAT+GGG - tig0026500:45587-45606 Msa1429390:intron 30.0%
GACCTATAGTTTATGTAGTA+AGG - tig0026500:45803-45822 Msa1429390:intron 30.0%
CTCCTTACTACATAAACTAT+AGG + tig0026500:45808-45827 None:intergenic 30.0%
! TGAGATCAGATTTTGAATTG+AGG + tig0026500:46077-46096 None:intergenic 30.0%
TCATGGAAGAAAATGAATTG+AGG + tig0026500:46182-46201 None:intergenic 30.0%
TTCTTAGTGTAATATCTCAC+TGG - tig0026500:46262-46281 Msa1429390:intron 30.0%
AATTGTACCAATTTGGAAGA+AGG - tig0026500:46631-46650 Msa1429390:CDS 30.0%
GAAGAAGGATGATGAAAAAA+TGG - tig0026500:46646-46665 Msa1429390:CDS 30.0%
AGAAATTGAATTTCCATCCA+GGG + tig0026500:46757-46776 None:intergenic 30.0%
TGGATGGAAATTCAATTTCT+GGG - tig0026500:46757-46776 Msa1429390:intron 30.0%
! ATTCAATTTCTGGGAAATGA+AGG - tig0026500:46766-46785 Msa1429390:intron 30.0%
CAGAATCAATGTGTACAATT+TGG + tig0026500:46828-46847 None:intergenic 30.0%
GTTCCTCTTAGAATTGAAAT+TGG - tig0026500:46922-46941 Msa1429390:intron 30.0%
CTTAAATCTGCAATATCACA+AGG - tig0026500:47554-47573 Msa1429390:intron 30.0%
GTCATTAGAGTTGTTAATCA+TGG + tig0026500:47688-47707 None:intergenic 30.0%
AGATGAGTTAAAAGTGAAAG+AGG - tig0026500:47733-47752 Msa1429390:intron 30.0%
TTAAAAGTGAAAGAGGAAAC+TGG - tig0026500:47740-47759 Msa1429390:intron 30.0%
! AAACATCTTTTAATCCCTTG+TGG + tig0026500:47797-47816 None:intergenic 30.0%
! TTATACAACTTTTGCCTAAG+TGG + tig0026500:47983-48002 None:intergenic 30.0%
ACTTAGGCAAAAGTTGTATA+AGG - tig0026500:47982-48001 Msa1429390:CDS 30.0%
CTTAGGCAAAAGTTGTATAA+GGG - tig0026500:47983-48002 Msa1429390:CDS 30.0%
!! TTTTTGGAGAAGAGTGAAAG+AGG + tig0026500:41951-41970 None:intergenic 35.0%
TTCTCCAAAAACCACACAAA+TGG - tig0026500:41960-41979 Msa1429390:three_prime_UTR 35.0%
! TGAGAAATTGCTGTTGTTGA+GGG + tig0026500:42027-42046 None:intergenic 35.0%
AATGCCGAATTAGCAGATTA+CGG - tig0026500:42219-42238 Msa1429390:CDS 35.0%
GAATATCTGATCTGACACTA+TGG + tig0026500:42828-42847 None:intergenic 35.0%
TTAAGGCTGCTTGTAAAAAC+AGG - tig0026500:42885-42904 Msa1429390:intron 35.0%
TAAGGCTGCTTGTAAAAACA+GGG - tig0026500:42886-42905 Msa1429390:intron 35.0%
!! GAAGGCATCAAACAAATGAT+GGG + tig0026500:43340-43359 None:intergenic 35.0%
!! AGAAGGCATCAAACAAATGA+TGG + tig0026500:43341-43360 None:intergenic 35.0%
AAAGAAGCAAGTCATGTTGA+GGG - tig0026500:43403-43422 Msa1429390:CDS 35.0%
AGTTAGCAGTAGTGACAATT+GGG - tig0026500:43437-43456 Msa1429390:intron 35.0%
!!! TTTTCCATTTTTTGAGGCTG+TGG - tig0026500:43629-43648 Msa1429390:intron 35.0%
TTCACAATGGTTTCACTTGT+AGG + tig0026500:43664-43683 None:intergenic 35.0%
TGAATCACATGTTTACTCAG+TGG - tig0026500:43680-43699 Msa1429390:intron 35.0%
TAATCAAGAGAGGAAGATCA+CGG + tig0026500:43717-43736 None:intergenic 35.0%
TCTTCCTCTCTTGATTAATC+AGG - tig0026500:43720-43739 Msa1429390:intron 35.0%
! TTTTGCTTACAAACGAAACC+AGG + tig0026500:43756-43775 None:intergenic 35.0%
CTTGAATTTCTTTGGCAAGA+AGG - tig0026500:43891-43910 Msa1429390:intron 35.0%
ATCTTGACGAAGAGAATATG+CGG + tig0026500:43959-43978 None:intergenic 35.0%
! AGCTTGTTCAAAAGCAAATC+TGG + tig0026500:44071-44090 None:intergenic 35.0%
! TCTAAAGTGGAAACATTTGC+TGG - tig0026500:44118-44137 Msa1429390:intron 35.0%
CACAAAATACTTCATTCCTG+TGG - tig0026500:44269-44288 Msa1429390:intron 35.0%
!! AGCTTGCTACTTAAAGTTCA+AGG + tig0026500:44340-44359 None:intergenic 35.0%
! CTTGATTTTGCCAGCTATTT+CGG - tig0026500:44358-44377 Msa1429390:intron 35.0%
TTTAAAGAGACCGAAATAGC+TGG + tig0026500:44371-44390 None:intergenic 35.0%
TTGCAGCTAATGTAGCATTA+AGG - tig0026500:44518-44537 Msa1429390:intron 35.0%
TTCTGTAAATAAGAGGAGGT+AGG - tig0026500:44550-44569 Msa1429390:intron 35.0%
AAATAAGAGGAGGTAGGATT+AGG - tig0026500:44556-44575 Msa1429390:intron 35.0%
TCAAATGAGTCATCTATTGC+GGG + tig0026500:44729-44748 None:intergenic 35.0%
! TATGCATTGGTATGCGTAAT+AGG - tig0026500:44917-44936 Msa1429390:intron 35.0%
! ATGCATTGGTATGCGTAATA+GGG - tig0026500:44918-44937 Msa1429390:intron 35.0%
GTCAACTGTGTCATGTATTA+AGG - tig0026500:44940-44959 Msa1429390:intron 35.0%
GGCTTGGATTTATCATAAGT+AGG + tig0026500:45052-45071 None:intergenic 35.0%
! GACTATAGCAAACCTTTTAG+TGG - tig0026500:45148-45167 Msa1429390:intron 35.0%
GAAGACCCCATAAAAGAAAA+TGG + tig0026500:45235-45254 None:intergenic 35.0%
TCACAGATGAAAATGGACAA+AGG - tig0026500:45339-45358 Msa1429390:intron 35.0%
CACAGATGAAAATGGACAAA+GGG - tig0026500:45340-45359 Msa1429390:intron 35.0%
GGTTAAATGTAGCACTTTAG+AGG - tig0026500:45526-45545 Msa1429390:intron 35.0%
!!! CGCTTATTTTATGCTCGAAT+TGG + tig0026500:45636-45655 None:intergenic 35.0%
ACAACATTAGAGAGAGACTT+GGG - tig0026500:45718-45737 Msa1429390:intron 35.0%
AGTAAGGAGAGTAGATAAGA+CGG - tig0026500:45819-45838 Msa1429390:CDS 35.0%
TCAGTTAGAGTATATTCGGA+TGG - tig0026500:46313-46332 Msa1429390:intron 35.0%
CAGCATGAACTTGTCAAAAA+TGG + tig0026500:46589-46608 None:intergenic 35.0%
AGGTGGTAATTGTACCAATT+TGG - tig0026500:46624-46643 Msa1429390:CDS 35.0%
TCATCATCCTTCTTCCAAAT+TGG + tig0026500:46641-46660 None:intergenic 35.0%
GAAATTGAATTTCCATCCAG+GGG + tig0026500:46756-46775 None:intergenic 35.0%
CAGAAATTGAATTTCCATCC+AGG + tig0026500:46758-46777 None:intergenic 35.0%
CTGGATGGAAATTCAATTTC+TGG - tig0026500:46756-46775 Msa1429390:intron 35.0%
! ATTTCTGGGAAATGAAGGTT+CGG - tig0026500:46771-46790 Msa1429390:intron 35.0%
TGAAGGTTCGGATTTAAACT+TGG - tig0026500:46783-46802 Msa1429390:intron 35.0%
! ATTGATTCTGTTTATGCTGC+TGG - tig0026500:46838-46857 Msa1429390:intron 35.0%
GGACCAATTTCAATTCTAAG+AGG + tig0026500:46928-46947 None:intergenic 35.0%
TTAGAATTGAAATTGGTCCC+CGG - tig0026500:46929-46948 Msa1429390:intron 35.0%
!! GAAAGTGTTTGGAATCTCTA+TGG - tig0026500:47008-47027 Msa1429390:intron 35.0%
ACATACACCTCCAAAATTGA+AGG + tig0026500:47036-47055 None:intergenic 35.0%
GGTGTATGTTAAAGACAAGT+TGG - tig0026500:47047-47066 Msa1429390:intron 35.0%
AGACATTTGGATCTAACTGT+TGG - tig0026500:47153-47172 Msa1429390:intron 35.0%
! TGTATTACATAGAGTGGACT+TGG + tig0026500:47307-47326 None:intergenic 35.0%
! AAAGCATTAGAGACAGTTCT+CGG + tig0026500:47340-47359 None:intergenic 35.0%
AACTGTCTCTAATGCTTTAG+TGG - tig0026500:47342-47361 Msa1429390:intron 35.0%
TGCAATATCACAAGGCAAAT+GGG - tig0026500:47562-47581 Msa1429390:intron 35.0%
GTTGTTAATCATGGTCTTTC+TGG + tig0026500:47679-47698 None:intergenic 35.0%
CTTGCAGAGTTAGTAAGATT+TGG + tig0026500:47858-47877 None:intergenic 35.0%
! GACACCATTTGTGTGGTTTT+TGG + tig0026500:41967-41986 None:intergenic 40.0%
! AGAAATTGCTGTTGTTGAGG+GGG + tig0026500:42025-42044 None:intergenic 40.0%
! GAGAAATTGCTGTTGTTGAG+GGG + tig0026500:42026-42045 None:intergenic 40.0%
! GTGAGAAATTGCTGTTGTTG+AGG + tig0026500:42028-42047 None:intergenic 40.0%
GTAATCTGCTAATTCGGCAT+TGG + tig0026500:42220-42239 None:intergenic 40.0%
ACAATGGTTATTCGTCCCTA+TGG - tig0026500:42255-42274 Msa1429390:CDS 40.0%
AATGTCAAGTTCAAGGAGAC+TGG - tig0026500:42404-42423 Msa1429390:intron 40.0%
! CTGCAATTTGTTTGCATAGG+AGG - tig0026500:42492-42511 Msa1429390:CDS 40.0%
CTGCTTGTAAAAACAGGGTA+AGG - tig0026500:42891-42910 Msa1429390:intron 40.0%
CGTACAATACACCAAATGGT+GGG - tig0026500:42917-42936 Msa1429390:intron 40.0%
ACAGTACAAGATATAGGCAC+AGG + tig0026500:43232-43251 None:intergenic 40.0%
TGCAGAACAGATTTGAGAGA+AGG + tig0026500:43358-43377 None:intergenic 40.0%
GAAAGAAGCAAGTCATGTTG+AGG - tig0026500:43402-43421 Msa1429390:CDS 40.0%
ATTGTCACTACTGCTAACTC+TGG + tig0026500:43436-43455 None:intergenic 40.0%
GAGTTAGCAGTAGTGACAAT+TGG - tig0026500:43436-43455 Msa1429390:intron 40.0%
GTTAGCAGTAGTGACAATTG+GGG - tig0026500:43438-43457 Msa1429390:intron 40.0%
TTAGCAGTAGTGACAATTGG+GGG - tig0026500:43439-43458 Msa1429390:intron 40.0%
CAATGGTTTCACTTGTAGGT+CGG + tig0026500:43660-43679 None:intergenic 40.0%
TAATCAGGTAAACGATGTCC+TGG - tig0026500:43735-43754 Msa1429390:intron 40.0%
AGCTGCCATACCTGTTATTA+CGG - tig0026500:44087-44106 Msa1429390:intron 40.0%
! GATTTTCGACCCGTAATAAC+AGG + tig0026500:44100-44119 None:intergenic 40.0%
TACGGGTCGAAAATCTAAAG+TGG - tig0026500:44105-44124 Msa1429390:intron 40.0%
TTGTAAGACCTACACGATTG+AGG - tig0026500:44144-44163 Msa1429390:intron 40.0%
TACACGATTGAGGCAATGAT+GGG - tig0026500:44154-44173 Msa1429390:intron 40.0%
!! AAAAGTTTTGGCCAAGGTTG+TGG + tig0026500:44210-44229 None:intergenic 40.0%
AATGCTACATTAGCTGCAAC+CGG + tig0026500:44517-44536 None:intergenic 40.0%
CAGCTAATGTAGCATTAAGG+AGG - tig0026500:44521-44540 Msa1429390:intron 40.0%
GAAGGATTGTTGTGTAAGTG+TGG + tig0026500:44617-44636 None:intergenic 40.0%
! CAAGTGATAGTAGGACTAGT+TGG + tig0026500:44654-44673 None:intergenic 40.0%
CTGTGTCATGTATTAAGGGA+CGG - tig0026500:44945-44964 Msa1429390:intron 40.0%
ATGGCACAATCAATATGGCT+TGG + tig0026500:45068-45087 None:intergenic 40.0%
! GCACTCATGTTTCTATAGCT+TGG + tig0026500:45119-45138 None:intergenic 40.0%
GTGCAGTTCACAGATGAAAA+TGG - tig0026500:45332-45351 Msa1429390:intron 40.0%
!! GTTAGTACTCGTTTTGTTGG+AGG - tig0026500:45389-45408 Msa1429390:intron 40.0%
!!! TTTTGTTGGAGGCATCATCA+TGG - tig0026500:45400-45419 Msa1429390:intron 40.0%
!! CAATCTTTGGAGGAAGCATT+AGG + tig0026500:45445-45464 None:intergenic 40.0%
AAGAATATGGGACAGAGTGT+TGG - tig0026500:45599-45618 Msa1429390:intron 40.0%
! AGAATATGGGACAGAGTGTT+GGG - tig0026500:45600-45619 Msa1429390:intron 40.0%
CGAGCATAAAATAAGCGTAG+AGG - tig0026500:45639-45658 Msa1429390:intron 40.0%
AAATAAGCGTAGAGGAGATG+AGG - tig0026500:45647-45666 Msa1429390:intron 40.0%
TGTGGTAAGACTAGCAAGAT+AGG - tig0026500:45685-45704 Msa1429390:intron 40.0%
GACAACATTAGAGAGAGACT+TGG - tig0026500:45717-45736 Msa1429390:intron 40.0%
CAACATTAGAGAGAGACTTG+GGG - tig0026500:45719-45738 Msa1429390:intron 40.0%
! TTCACCGTCTTTTCTACAAG+AGG + tig0026500:45750-45769 None:intergenic 40.0%
TAGAAAAGACGGTGAAAACC+CGG - tig0026500:45754-45773 Msa1429390:intron 40.0%
GAGGATAGTCAAATCACTAG+AGG - tig0026500:45841-45860 Msa1429390:CDS 40.0%
TTATACCACTAAGTGGTGGT+CGG + tig0026500:45979-45998 None:intergenic 40.0%
TGAATTGAGGTGAGTCCTAT+TGG + tig0026500:46064-46083 None:intergenic 40.0%
! ACAGTGAAAGCTGTCTCTTT+TGG - tig0026500:46127-46146 Msa1429390:CDS 40.0%
CACTGGATGTATTCATGCAT+CGG - tig0026500:46279-46298 Msa1429390:intron 40.0%
GTTAGAGTATATTCGGATGG+AGG - tig0026500:46316-46335 Msa1429390:intron 40.0%
TTGGATGTAGAAGTTTGGAG+TGG + tig0026500:46508-46527 None:intergenic 40.0%
GTACAATTACCACCTAAACC+AGG + tig0026500:46619-46638 None:intergenic 40.0%
AAAGAAGCTCTTCAAAGCTC+TGG - tig0026500:46695-46714 Msa1429390:intron 40.0%
TAAGAGGAACTCCCTGAAAT+TGG + tig0026500:46912-46931 None:intergenic 40.0%
TAGAATTGAAATTGGTCCCC+GGG - tig0026500:46930-46949 Msa1429390:intron 40.0%
ATATCCAGGAGAGATATTCC+TGG - tig0026500:46976-46995 Msa1429390:intron 40.0%
TATCCAGGAGAGATATTCCT+GGG - tig0026500:46977-46996 Msa1429390:intron 40.0%
! CTCTATGGAGCCTTCAATTT+TGG - tig0026500:47023-47042 Msa1429390:intron 40.0%
! TATGGAGCCTTCAATTTTGG+AGG - tig0026500:47026-47045 Msa1429390:intron 40.0%
! CGAGATACAGTCTTCTCTTT+TGG - tig0026500:47071-47090 Msa1429390:intron 40.0%
!! TACAGTCTTCTCTTTTGGAG+AGG - tig0026500:47076-47095 Msa1429390:intron 40.0%
!! ACAGTCTTCTCTTTTGGAGA+GGG - tig0026500:47077-47096 Msa1429390:intron 40.0%
!! TTGGATCTAACTGTTGGTTC+TGG - tig0026500:47159-47178 Msa1429390:intron 40.0%
! TACATAGAGTGGACTTGGTT+TGG + tig0026500:47302-47321 None:intergenic 40.0%
CAATTGGAATGAGTTCCTTG+TGG - tig0026500:47402-47421 Msa1429390:intron 40.0%
TGTCAATTTGCCTGTTTGCT+GGG + tig0026500:47472-47491 None:intergenic 40.0%
ATGTCAATTTGCCTGTTTGC+TGG + tig0026500:47473-47492 None:intergenic 40.0%
CTGCAATATCACAAGGCAAA+TGG - tig0026500:47561-47580 Msa1429390:intron 40.0%
TTTCCATTTGAACAGCCACA+AGG - tig0026500:47779-47798 Msa1429390:CDS 40.0%
TTCCATTTGAACAGCCACAA+GGG - tig0026500:47780-47799 Msa1429390:CDS 40.0%
AAAATAGCCACTTCTTCAGC+AGG + tig0026500:47833-47852 None:intergenic 40.0%
TTGGAGAAGAGTGAAAGAGG+AGG + tig0026500:41948-41967 None:intergenic 45.0%
CTTGAGAGACACCATTTGTG+TGG + tig0026500:41974-41993 None:intergenic 45.0%
!! AGAAGGTGAAAGGTTGGTGA+CGG + tig0026500:42077-42096 None:intergenic 45.0%
!! GATTCTTCGAGTTGTCGACT+CGG + tig0026500:42131-42150 None:intergenic 45.0%
CGGACCGTAATCTGCTAATT+CGG + tig0026500:42226-42245 None:intergenic 45.0%
CGAATTAGCAGATTACGGTC+CGG - tig0026500:42224-42243 Msa1429390:CDS 45.0%
ATAACCATTGTACCGCGAAC+CGG + tig0026500:42246-42265 None:intergenic 45.0%
TCCCTATGGTTACGCCATTT+GGG - tig0026500:42269-42288 Msa1429390:CDS 45.0%
TCCCAAATGGCGTAACCATA+GGG + tig0026500:42273-42292 None:intergenic 45.0%
TTCCCAAATGGCGTAACCAT+AGG + tig0026500:42274-42293 None:intergenic 45.0%
AACCTGAATGGCTTCCCAAA+TGG + tig0026500:42286-42305 None:intergenic 45.0%
AAGCACTTGCGACACTGTTT+GGG + tig0026500:42765-42784 None:intergenic 45.0%
TAAGCACTTGCGACACTGTT+TGG + tig0026500:42766-42785 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - tig0026500:42913-42932 Msa1429390:intron 45.0%
GCGTACAATACACCAAATGG+TGG - tig0026500:42916-42935 Msa1429390:intron 45.0%
!! TGCTTGTACTTGGGTTAGTG+CGG - tig0026500:43150-43169 Msa1429390:intron 45.0%
CGTTGAAAAGCTGTGACCTA+AGG - tig0026500:43593-43612 Msa1429390:intron 45.0%
! TTGAATGAACGGGCTTCAGT+GGG - tig0026500:43821-43840 Msa1429390:intron 45.0%
AGTGGGCAAATGTCACAAGA+TGG - tig0026500:43838-43857 Msa1429390:intron 45.0%
GTGGGCAAATGTCACAAGAT+GGG - tig0026500:43839-43858 Msa1429390:intron 45.0%
TCCAGAAGAGGCAGAAAATG+AGG - tig0026500:43932-43951 Msa1429390:intron 45.0%
! ACCTCATTTTCTGCCTCTTC+TGG + tig0026500:43936-43955 None:intergenic 45.0%
CAAGTATTCTGCTCTGTTGC+AGG - tig0026500:44021-44040 Msa1429390:intron 45.0%
GCTGCCATACCTGTTATTAC+GGG - tig0026500:44088-44107 Msa1429390:intron 45.0%
TCGACCCGTAATAACAGGTA+TGG + tig0026500:44095-44114 None:intergenic 45.0%
CATCATTGCCTCAATCGTGT+AGG + tig0026500:44155-44174 None:intergenic 45.0%
CTACACGATTGAGGCAATGA+TGG - tig0026500:44153-44172 Msa1429390:intron 45.0%
!! GACAAGAAAGCATTGCAAGC+AGG - tig0026500:44178-44197 Msa1429390:intron 45.0%
!! CAAAGGCACGGGAAAAGTTT+TGG + tig0026500:44222-44241 None:intergenic 45.0%
AGACCTGTGTTTCAAAGGCA+CGG + tig0026500:44234-44253 None:intergenic 45.0%
GCATCAGACCTGTGTTTCAA+AGG + tig0026500:44239-44258 None:intergenic 45.0%
ATGAGTCATCTATTGCGGGA+CGG + tig0026500:44725-44744 None:intergenic 45.0%
TGTCATGTATTAAGGGACGG+AGG - tig0026500:44948-44967 Msa1429390:intron 45.0%
GTCATGTATTAAGGGACGGA+GGG - tig0026500:44949-44968 Msa1429390:intron 45.0%
GAAGTGGGGAAAACAGAATC+TGG + tig0026500:45183-45202 None:intergenic 45.0%
TATTTGGCAGACATCATGGG+CGG - tig0026500:45367-45386 Msa1429390:intron 45.0%
! GCGGTTAGTACTCGTTTTGT+TGG - tig0026500:45386-45405 Msa1429390:intron 45.0%
ATGGTACATGGAGATGATGC+TGG - tig0026500:45419-45438 Msa1429390:intron 45.0%
! TGTATCGGTGCAATCTTTGG+AGG + tig0026500:45455-45474 None:intergenic 45.0%
! TCCAAAGATTGCACCGATAC+AGG - tig0026500:45454-45473 Msa1429390:intron 45.0%
! ACCTGTATCGGTGCAATCTT+TGG + tig0026500:45458-45477 None:intergenic 45.0%
! AGATTGCACCGATACAGGTA+TGG - tig0026500:45459-45478 Msa1429390:intron 45.0%
GCATCCAACCATACCTGTAT+CGG + tig0026500:45470-45489 None:intergenic 45.0%
CAGGTATGGTTGGATGCTAT+TGG - tig0026500:45473-45492 Msa1429390:intron 45.0%
AGGATGTTGCGTTGTATGTG+TGG - tig0026500:45667-45686 Msa1429390:intron 45.0%
AGCGCCTCTTGTAGAAAAGA+CGG - tig0026500:45743-45762 Msa1429390:intron 45.0%
AAGGAGAGTAGATAAGACGG+AGG - tig0026500:45822-45841 Msa1429390:CDS 45.0%
GACCACCACTTAGTGGTATA+AGG - tig0026500:45978-45997 Msa1429390:CDS 45.0%
! AGCCTTATACCACTAAGTGG+TGG + tig0026500:45983-46002 None:intergenic 45.0%
! CCAAGCCTTATACCACTAAG+TGG + tig0026500:45986-46005 None:intergenic 45.0%
CCACTTAGTGGTATAAGGCT+TGG - tig0026500:45983-46002 Msa1429390:CDS 45.0%
GGAGGAGATTGAGAAGATGA+AGG - tig0026500:46334-46353 Msa1429390:CDS 45.0%
AGAGATATTCCTGGGAAGCA+AGG - tig0026500:46985-47004 Msa1429390:intron 45.0%
GAGATATTCCTGGGAAGCAA+GGG - tig0026500:46986-47005 Msa1429390:intron 45.0%
GGGCAATTGCATTTCGAGAT+AGG - tig0026500:47097-47116 Msa1429390:intron 45.0%
TGCACAACATGATGACCACA+AGG + tig0026500:47420-47439 None:intergenic 45.0%
! GTCAATTTGCCTGTTTGCTG+GGG + tig0026500:47471-47490 None:intergenic 45.0%
TATCACAAGGCAAATGGGCA+AGG - tig0026500:47567-47586 Msa1429390:intron 45.0%
ATCACAAGGCAAATGGGCAA+GGG - tig0026500:47568-47587 Msa1429390:intron 45.0%
AACACAACCTAGCAGACCAA+GGG + tig0026500:47595-47614 None:intergenic 45.0%
AAACACAACCTAGCAGACCA+AGG + tig0026500:47596-47615 None:intergenic 45.0%
AGGAAACTGGAGCAACTATC+AGG - tig0026500:47753-47772 Msa1429390:intron 45.0%
ATCCCTTGTGGCTGTTCAAA+TGG + tig0026500:47785-47804 None:intergenic 45.0%
TGCTTGAACCCTTAGAGCAA+AGG - tig0026500:48128-48147 Msa1429390:five_prime_UTR 45.0%
GCTTGAACCCTTAGAGCAAA+GGG - tig0026500:48129-48148 Msa1429390:five_prime_UTR 45.0%
CTTTCGTCCCTTTGCTCTAA+GGG + tig0026500:48139-48158 None:intergenic 45.0%
ACTTTCGTCCCTTTGCTCTA+AGG + tig0026500:48140-48159 None:intergenic 45.0%
!! TATATATAATTAATTAAGTT+TGG + tig0026500:42469-42488 None:intergenic 5.0%
!! TTTATTGTTATATAAATTTA+AGG - tig0026500:42868-42887 Msa1429390:intron 5.0%
!! TTTATATAACAATAAAAAAA+GGG + tig0026500:42991-43010 None:intergenic 5.0%
!! ATTTATATAACAATAAAAAA+AGG + tig0026500:42992-43011 None:intergenic 5.0%
!! ACATATTTATATAAAAATAA+AGG + tig0026500:47629-47648 None:intergenic 5.0%
!!! TTTTATATAAATATGTTATA+CGG - tig0026500:47633-47652 Msa1429390:CDS 5.0%
GAGGTAGAGAGAGTGAGATG+AGG + tig0026500:41929-41948 None:intergenic 50.0%
! AATTGCTGTTGTTGAGGGGG+AGG + tig0026500:42022-42041 None:intergenic 50.0%
!! GTTTTGGCGGAGAAGGTGAA+AGG + tig0026500:42087-42106 None:intergenic 50.0%
!! TAGGAGTGATGACTCGGTCA+GGG + tig0026500:42158-42177 None:intergenic 50.0%
GTGACCTAGGAGTGATGACT+CGG + tig0026500:42164-42183 None:intergenic 50.0%
AGTCATCACTCCTAGGTCAC+AGG - tig0026500:42164-42183 Msa1429390:three_prime_UTR 50.0%
GCATTGAAGTCCTGTGACCT+AGG + tig0026500:42177-42196 None:intergenic 50.0%
GTCCCTATGGTTACGCCATT+TGG - tig0026500:42268-42287 Msa1429390:CDS 50.0%
!! TCTGACACTATGGGCTGGTT+TGG + tig0026500:42818-42837 None:intergenic 50.0%
TCTGATCTGACACTATGGGC+TGG + tig0026500:42823-42842 None:intergenic 50.0%
CTAAAGCTCCCTCATACGCA+GGG + tig0026500:42956-42975 None:intergenic 50.0%
ACTAAAGCTCCCTCATACGC+AGG + tig0026500:42957-42976 None:intergenic 50.0%
! ATGAGGGAGCTTTAGTGCAC+CGG - tig0026500:42961-42980 Msa1429390:CDS 50.0%
AGTGACAATTGGGGGTGGAA+AGG - tig0026500:43447-43466 Msa1429390:intron 50.0%
GGAACTTGAAGAGAAGCTCG+TGG - tig0026500:43468-43487 Msa1429390:intron 50.0%
CCTGCCACAGCCTCAAAAAA+TGG + tig0026500:43636-43655 None:intergenic 50.0%
!!! CCATTTTTTGAGGCTGTGGC+AGG - tig0026500:43633-43652 Msa1429390:intron 50.0%
GAGGAAGATCACGGTAGCTA+TGG + tig0026500:43708-43727 None:intergenic 50.0%
CTGAAGCCCGTTCATTCAAC+AGG + tig0026500:43820-43839 None:intergenic 50.0%
! GTTGAATGAACGGGCTTCAG+TGG - tig0026500:43820-43839 Msa1429390:intron 50.0%
TGCTCATGCAACTCCAGAAG+AGG - tig0026500:43920-43939 Msa1429390:intron 50.0%
!! CACGGGAAAAGTTTTGGCCA+AGG + tig0026500:44216-44235 None:intergenic 50.0%
!! TTCCCGTGCCTTTGAAACAC+AGG - tig0026500:44228-44247 Msa1429390:intron 50.0%
! GACCTGTGTTTCAAAGGCAC+GGG + tig0026500:44233-44252 None:intergenic 50.0%
TGGATGCTGCAGCCACTAAA+AGG + tig0026500:45163-45182 None:intergenic 50.0%
!! GGAGGCATCATCATGGTACA+TGG - tig0026500:45407-45426 Msa1429390:intron 50.0%
! TGCACCGATACAGGTATGGT+TGG - tig0026500:45463-45482 Msa1429390:intron 50.0%
!! ATATGGGACAGAGTGTTGGG+CGG - tig0026500:45603-45622 Msa1429390:intron 50.0%
AAAACCCGGCTTAGGTGGTT+TGG - tig0026500:45768-45787 Msa1429390:intron 50.0%
AAACCCGGCTTAGGTGGTTT+GGG - tig0026500:45769-45788 Msa1429390:intron 50.0%
AGTTCATGCTGTGCATTGCC+TGG - tig0026500:46598-46617 Msa1429390:CDS 50.0%
TGCTGTGCATTGCCTGGTTT+AGG - tig0026500:46604-46623 Msa1429390:CDS 50.0%
TGTGCATTGCCTGGTTTAGG+TGG - tig0026500:46607-46626 Msa1429390:CDS 50.0%
GACTCAGATCAAAGAACCCC+TGG - tig0026500:46737-46756 Msa1429390:intron 50.0%
CAGATCAAAGAACCCCTGGA+TGG - tig0026500:46741-46760 Msa1429390:intron 50.0%
! GTGGAAGTGTGGTGATATCC+AGG - tig0026500:46962-46981 Msa1429390:intron 50.0%
CTTCCCAGGAATATCTCTCC+TGG + tig0026500:46983-47002 None:intergenic 50.0%
AACACTTTCCCTTGCTTCCC+AGG + tig0026500:46997-47016 None:intergenic 50.0%
!! GGGAAGCAAGGGAAAGTGTT+TGG - tig0026500:46997-47016 Msa1429390:intron 50.0%
GGCATGAACATGTGTGCGAT+GGG + tig0026500:47446-47465 None:intergenic 50.0%
TGGCATGAACATGTGTGCGA+TGG + tig0026500:47447-47466 None:intergenic 50.0%
! ATTTGCCTGTTTGCTGGGGA+TGG + tig0026500:47467-47486 None:intergenic 50.0%
TCACAAGGCAAATGGGCAAG+GGG - tig0026500:47569-47588 Msa1429390:intron 50.0%
AGGAGATCCTGCTGAAGAAG+TGG - tig0026500:47823-47842 Msa1429390:CDS 50.0%
TTGTTGAGGGGGAGGAGAAG+AGG + tig0026500:42014-42033 None:intergenic 55.0%
GGCGGAGAATGATTGGGGAA+CGG + tig0026500:42050-42069 None:intergenic 55.0%
!! AGGTGAAAGGTTGGTGACGG+CGG + tig0026500:42074-42093 None:intergenic 55.0%
TGGCGGAGAAGGTGAAAGGT+TGG + tig0026500:42083-42102 None:intergenic 55.0%
!!! TGCAGTGGTTTTGGCGGAGA+AGG + tig0026500:42094-42113 None:intergenic 55.0%
!!! CTCTGCTGCAGTGGTTTTGG+CGG + tig0026500:42100-42119 None:intergenic 55.0%
!! CGAGTTGTCGACTCGGTCTT+TGG + tig0026500:42124-42143 None:intergenic 55.0%
!! CTAGGAGTGATGACTCGGTC+AGG + tig0026500:42159-42178 None:intergenic 55.0%
CTGACCGAGTCATCACTCCT+AGG - tig0026500:42157-42176 Msa1429390:three_prime_UTR 55.0%
GGTCACAGGACTTCAATGCG+TGG - tig0026500:42178-42197 Msa1429390:three_prime_UTR 55.0%
CGCCATTTGGGAAGCCATTC+AGG - tig0026500:42281-42300 Msa1429390:CDS 55.0%
! TGAGGGAGCTTTAGTGCACC+GGG - tig0026500:42962-42981 Msa1429390:CDS 55.0%
GCAGTAGTGACAATTGGGGG+TGG - tig0026500:43442-43461 Msa1429390:intron 55.0%
!! GTTTTGGCCAAGGTTGTGGC+TGG + tig0026500:44206-44225 None:intergenic 55.0%
GTCATCTATTGCGGGACGGA+GGG + tig0026500:44721-44740 None:intergenic 55.0%
AGTCATCTATTGCGGGACGG+AGG + tig0026500:44722-44741 None:intergenic 55.0%
GCAGCTGCATCCTCGTTGAA+AGG + tig0026500:45297-45316 None:intergenic 55.0%
AGACGGTGAAAACCCGGCTT+AGG - tig0026500:45760-45779 Msa1429390:intron 55.0%
ATGCCCAAACCACCTAAGCC+GGG + tig0026500:45775-45794 None:intergenic 55.0%
CATGCCCAAACCACCTAAGC+CGG + tig0026500:45776-45795 None:intergenic 55.0%
! GGTGGTTTGGGCATGTAGAG+AGG - tig0026500:45781-45800 Msa1429390:intron 55.0%
CTAAGTGGTGGTCGGCTACA+TGG + tig0026500:45971-45990 None:intergenic 55.0%
TGTAGCCGACCACCACTTAG+TGG - tig0026500:45971-45990 Msa1429390:CDS 55.0%
ACTTCCACTAGACACGTCCC+GGG + tig0026500:46950-46969 None:intergenic 55.0%
CACTTCCACTAGACACGTCC+CGG + tig0026500:46951-46970 None:intergenic 55.0%
GGACGTGTCTAGTGGAAGTG+TGG - tig0026500:46951-46970 Msa1429390:intron 55.0%
TCATGCCATCCCCAGCAAAC+AGG - tig0026500:47459-47478 Msa1429390:intron 55.0%
!! GCGGTGGCGGAGAATGATTG+GGG + tig0026500:42055-42074 None:intergenic 60.0%
!! GGCGGTGGCGGAGAATGATT+GGG + tig0026500:42056-42075 None:intergenic 60.0%
!! TGAAAGGTTGGTGACGGCGG+TGG + tig0026500:42071-42090 None:intergenic 60.0%
CGCCAAAACCACTGCAGCAG+AGG - tig0026500:42098-42117 Msa1429390:three_prime_UTR 60.0%
! GGCCTCTGCTGCAGTGGTTT+TGG + tig0026500:42103-42122 None:intergenic 60.0%
GTCTTTGGCCTCTGCTGCAG+TGG + tig0026500:42109-42128 None:intergenic 60.0%
! GCAGATTACGGTCCGGTTCG+CGG - tig0026500:42231-42250 Msa1429390:CDS 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - tig0026500:42929-42948 Msa1429390:intron 60.0%
TCATACGCAGGGTCCGGGAA+GGG + tig0026500:42945-42964 None:intergenic 60.0%
TTCCCGGACCCTGCGTATGA+GGG - tig0026500:42945-42964 Msa1429390:intron 60.0%
GCAGGAACCAGCCACAACCT+TGG - tig0026500:44196-44215 Msa1429390:intron 60.0%
CGGTGAAAACCCGGCTTAGG+TGG - tig0026500:45763-45782 Msa1429390:intron 60.0%
CTTCCACTAGACACGTCCCG+GGG + tig0026500:46949-46968 None:intergenic 60.0%
!! CGGCGGTGGCGGAGAATGAT+TGG + tig0026500:42057-42076 None:intergenic 65.0%
!! AAGGTTGGTGACGGCGGTGG+CGG + tig0026500:42068-42087 None:intergenic 65.0%
! CGGTCCGGTTCGCGGTACAA+TGG - tig0026500:42239-42258 Msa1429390:CDS 65.0%
CGGGAAGGGGTCCCACCATT+TGG + tig0026500:42931-42950 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG + tig0026500:42944-42963 None:intergenic 65.0%
CTCATACGCAGGGTCCGGGA+AGG + tig0026500:42946-42965 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+AGG - tig0026500:42944-42963 Msa1429390:intron 65.0%
CTCCCTCATACGCAGGGTCC+GGG + tig0026500:42950-42969 None:intergenic 65.0%
GCTCCCTCATACGCAGGGTC+CGG + tig0026500:42951-42970 None:intergenic 65.0%
GCAAATGGGCAAGGGGCCCT+TGG - tig0026500:47576-47595 Msa1429390:intron 65.0%
CAAGGGGCCCTTGGTCTGCT+AGG - tig0026500:47585-47604 Msa1429390:intron 65.0%
GGTCCCCGGGACGTGTCTAG+TGG - tig0026500:46943-46962 Msa1429390:intron 70.0%
Chromosome Type Strat End Strand Name
tig0026500 gene 41908 48160 41908 ID=Msa1429390;Name=Msa1429390
tig0026500 mRNA 41908 48160 41908 ID=Msa1429390-mRNA-1;Parent=Msa1429390;Name=Msa1429390-mRNA-1;_AED=0.09;_eAED=0.09;_QI=71|1|1|1|1|1|11|292|541
tig0026500 exon 41908 42341 41908 ID=Msa1429390-mRNA-1:exon:6497;Parent=Msa1429390-mRNA-1
tig0026500 exon 42462 42545 42462 ID=Msa1429390-mRNA-1:exon:6496;Parent=Msa1429390-mRNA-1
tig0026500 exon 42950 43149 42950 ID=Msa1429390-mRNA-1:exon:6495;Parent=Msa1429390-mRNA-1
tig0026500 exon 43281 43442 43281 ID=Msa1429390-mRNA-1:exon:6494;Parent=Msa1429390-mRNA-1
tig0026500 exon 44593 44730 44593 ID=Msa1429390-mRNA-1:exon:6493;Parent=Msa1429390-mRNA-1
tig0026500 exon 45819 46025 45819 ID=Msa1429390-mRNA-1:exon:6492;Parent=Msa1429390-mRNA-1
tig0026500 exon 46115 46228 46115 ID=Msa1429390-mRNA-1:exon:6491;Parent=Msa1429390-mRNA-1
tig0026500 exon 46327 46413 46327 ID=Msa1429390-mRNA-1:exon:6490;Parent=Msa1429390-mRNA-1
tig0026500 exon 46579 46689 46579 ID=Msa1429390-mRNA-1:exon:6489;Parent=Msa1429390-mRNA-1
tig0026500 exon 47617 47673 47617 ID=Msa1429390-mRNA-1:exon:6488;Parent=Msa1429390-mRNA-1
tig0026500 exon 47766 48160 47766 ID=Msa1429390-mRNA-1:exon:6487;Parent=Msa1429390-mRNA-1
tig0026500 five_prime_UTR 48090 48160 48090 ID=Msa1429390-mRNA-1:five_prime_utr;Parent=Msa1429390-mRNA-1
tig0026500 CDS 47766 48089 47766 ID=Msa1429390-mRNA-1:cds;Parent=Msa1429390-mRNA-1
tig0026500 CDS 47617 47673 47617 ID=Msa1429390-mRNA-1:cds;Parent=Msa1429390-mRNA-1
tig0026500 CDS 46579 46689 46579 ID=Msa1429390-mRNA-1:cds;Parent=Msa1429390-mRNA-1
tig0026500 CDS 46327 46413 46327 ID=Msa1429390-mRNA-1:cds;Parent=Msa1429390-mRNA-1
tig0026500 CDS 46115 46228 46115 ID=Msa1429390-mRNA-1:cds;Parent=Msa1429390-mRNA-1
tig0026500 CDS 45819 46025 45819 ID=Msa1429390-mRNA-1:cds;Parent=Msa1429390-mRNA-1
tig0026500 CDS 44593 44730 44593 ID=Msa1429390-mRNA-1:cds;Parent=Msa1429390-mRNA-1
tig0026500 CDS 43281 43442 43281 ID=Msa1429390-mRNA-1:cds;Parent=Msa1429390-mRNA-1
tig0026500 CDS 42950 43149 42950 ID=Msa1429390-mRNA-1:cds;Parent=Msa1429390-mRNA-1
tig0026500 CDS 42462 42545 42462 ID=Msa1429390-mRNA-1:cds;Parent=Msa1429390-mRNA-1
tig0026500 CDS 42200 42341 42200 ID=Msa1429390-mRNA-1:cds;Parent=Msa1429390-mRNA-1
tig0026500 three_prime_UTR 41908 42199 41908 ID=Msa1429390-mRNA-1:three_prime_utr;Parent=Msa1429390-mRNA-1
Gene Sequence

>Msa1429390

ATGGTGTCTCTCAAGCTATCTTCTTTCACTCACCTCTTCTCCTCCCCCTCAACAACAGCAATTTCTCACCGTTCCCCAATCATTCTCCGCCACCGCCGTCACCAACCTTTCACCTTCTCCGCCAAAACCACTGCAGCAGAGGCCAAAGACCGAGTCGACAACTCGAAGAATCGCGTCCCTGACCGAGTCATCACTCCTAGGTCACAGGACTTCAATGCGTGGTATCTCGATATCATAGCCAATGCCGAATTAGCAGATTACGGTCCGGTTCGCGGTACAATGGTTATTCGTCCCTATGGTTACGCCATTTGGGAAGCCATTCAGGATTATTTGAATGTCAAGTTCAAGGAGACTGGACATAGTAACATGTATTTTCCACAGTTTATTCCTTACTCCTTTATAGAGAAAGAAGCAAGTCATGTTGAGGGTTTCAGTCCAGAGTTAGCAGTAGTGACAATTGGGGGTGGAAAGGAACTTGAAGAGAAGCTCGTGGTCCGACCTACAAGTGAAACCATTGTGAATCACATGTTTACTCAGTGGATCCATAGCTACCGTGATCTTCCTCTCTTGATTAATCAGTGGGCAAATGTCACAAGATGGGAGATGCGCACTAAACCATTTGTTAGAACTCTTGAATTTCTTTGGCAAGAAGGTCATACTGCTCATGCAACTCCAGAAGAGGCAGAAAATGAGGCTAAACAAATGATTGACATCTATACCAGATTTGCTTTTGAACAAGCTGCCATACCTGTTATTACGGGTCGAAAATCTAAAGTGGAAACATTTGCTGGTGCTTGTAAGACCTACACGATTGAGGCAATGATGGGTGACAAGAAAGCATTGCAAGCAGGAACCAGCCACAACCTTGGCCAAAACTTTTCCCGTGCCTTTGAAACACAGTTCACAGATGAAAATGGACAAAGGGAATATATTTGGCAGACATCATGGGCGGTTAGTACTCGTTTTGTTGGAGGCATCATCATGGTACATGGAGATGATGCTGGCCTAATGCTTCCTCCAAAGATTGCACCGATACAGGTGGTAATTGTACCAATTTGGAAGAAGGATGATGAAAAAATGGAAGTTCTTAGTGCAGCATTGTCTGTAAAAGAAGCTCTTCAAAGCTCTGGCGTTAAAGTAAAACTTGATGACTCAGATCAAAGAACCCCTGGATGGAAATTCAATTTCTGGGAAATGAAGGGAGTTCCTCTTAGAATTGAAATTGGTCCCCGGGACGTGTCTAGTGGAAGTGTGGTGATATCCAGGAGAGATATTCCTGGGAAGCAAGGGAAAGTGTTTGGAATCTCTATGGAGCCTTCAATTTTGGAGGTGTATGTTAAAGACAAGTTGGACGAGATACAGTCTTCTCTTTTGGAGAGGGCAATTGCATTTCGAGATAGTAATATTGTAGATGTGAGCACATACGAAGATCTTAAATCTGCAATATCACAAGGCAAATGGGCAAGGGGCCCTTGGTCTGCTAGCGATGAAGATGAGTTAAAAGTGAAAGAGGAAACTGGAGCAACTATCAGGTGTTTTCCATTTGAACAGCCACAAGGGATTAAAAGATGTTTGATGACAGGAGATCCTGCTGAAGAAGTGGCTATTTTTGCCAAATCTTACTAA

Protein sequence

>Msa1429390

MVSLKLSSFTHLFSSPSTTAISHRSPIILRHRRHQPFTFSAKTTAAEAKDRVDNSKNRVPDRVITPRSQDFNAWYLDIIANAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELAVVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHSYRDLPLLINQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAENEAKQMIDIYTRFAFEQAAIPVITGRKSKVETFAGACKTYTIEAMMGDKKALQAGTSHNLGQNFSRAFETQFTDENGQREYIWQTSWAVSTRFVGGIIMVHGDDAGLMLPPKIAPIQVVIVPIWKKDDEKMEVLSAALSVKEALQSSGVKVKLDDSDQRTPGWKFNFWEMKGVPLRIEIGPRDVSSGSVVISRRDIPGKQGKVFGISMEPSILEVYVKDKLDEIQSSLLERAIAFRDSNIVDVSTYEDLKSAISQGKWARGPWSASDEDELKVKEETGATIRCFPFEQPQGIKRCLMTGDPAEEVAIFAKSY*