AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1442300


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1442300 MtrunA17_Chr1g0191311 94.778 632 33 0 1 632 1 632 0.0 1160
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1442300 AT5G27330.1 25.354 706 369 16 1 629 1 625 8.12e-36 143
Msa1442300 AT3G05130.1 24.714 700 367 18 1 619 1 621 1.06e-24 109

Find 131 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGACCCAGATCACTGAATT+AGG 0.174575 tig0029852:-43252 Msa1442300:CDS
AGGGAGAAGATGAAGGATTT+AGG 0.187545 tig0029852:-43168 Msa1442300:CDS
AACAAATAAGGTGGAGAATT+TGG 0.209500 tig0029852:-42161 Msa1442300:CDS
GGGAGAAGATGAAGGATTTA+GGG 0.269179 tig0029852:-43167 Msa1442300:CDS
TGGTGGTGGTTGTGGGGTTA+AGG 0.273734 tig0029852:+43461 None:intergenic
TGGTGGATGGTGGTGGTTGT+GGG 0.274390 tig0029852:+43454 None:intergenic
TGTGGTCTAGGGTTTGAGAT+TGG 0.283893 tig0029852:+43487 None:intergenic
TGTCTCAGGTTAATCATTAT+AGG 0.291389 tig0029852:-42474 Msa1442300:CDS
TGTTTATAGGACTCTGGATA+TGG 0.296957 tig0029852:-42689 Msa1442300:CDS
GCTTGAGAAGGACTGGGATT+TGG 0.303984 tig0029852:-43046 Msa1442300:CDS
TTGGTGGATGGTGGTGGTTG+TGG 0.310014 tig0029852:+43453 None:intergenic
CACTGTTGCACATGTGTCTA+AGG 0.328802 tig0029852:-41891 Msa1442300:CDS
GTGGTCTAGGGTTTGAGATT+GGG 0.339700 tig0029852:+43488 None:intergenic
ATATGACGAGGCAACAAATA+AGG 0.371426 tig0029852:-42173 Msa1442300:CDS
AGGGGAGGGATACTGTTTAT+AGG 0.374876 tig0029852:-42702 Msa1442300:CDS
AGACCCAGATCACTGAATTA+GGG 0.375216 tig0029852:-43251 Msa1442300:CDS
GATGTTGGAAAATAGTAAAT+TGG 0.379157 tig0029852:-42770 Msa1442300:CDS
GTTGAAGGAGAAGATTGATT+TGG 0.396255 tig0029852:-42983 Msa1442300:CDS
CTGAATGCGGTTTCTGTGAT+TGG 0.397932 tig0029852:+43365 None:intergenic
AATCAATTCAAAGCAAACTT+TGG 0.409026 tig0029852:-41927 Msa1442300:CDS
AGCTAGAGATGAGGTTGAGA+AGG 0.410360 tig0029852:-42617 Msa1442300:CDS
GAAACCCTAATTCAGTGATC+TGG 0.411589 tig0029852:+43247 None:intergenic
GAAGGAGAAGAAAGAGGCTG+AGG 0.417267 tig0029852:-42956 Msa1442300:CDS
GGATATGGTTAAGAGAGAAT+TGG 0.418650 tig0029852:-42674 Msa1442300:CDS
TCTGCGTCTGATGCACATAA+AGG 0.420247 tig0029852:-41719 Msa1442300:CDS
GCAGTCACAAGTTGTGGAAA+TGG 0.421287 tig0029852:-42371 Msa1442300:CDS
TTAAGAGAGAATTGGAGAAT+AGG 0.439435 tig0029852:-42666 Msa1442300:CDS
AAAATTGTAGCTAGAGAGTC+TGG 0.443169 tig0029852:-42517 Msa1442300:CDS
GAAGGATTTAGGGTTGTGTC+TGG 0.450014 tig0029852:-43157 Msa1442300:CDS
GAAGATTGATTTGGTGGTGA+AGG 0.452814 tig0029852:-42974 Msa1442300:CDS
TTGAGGAGCTTGAGAAGGAC+TGG 0.455210 tig0029852:-43053 Msa1442300:CDS
TCATCATTGGTGGATGGTGG+TGG 0.456751 tig0029852:+43447 None:intergenic
TAAATTGGTTGGTGAGAAGA+AGG 0.457718 tig0029852:-42755 Msa1442300:CDS
CTGAACAGATGGGTCATCAT+TGG 0.459753 tig0029852:+43434 None:intergenic
TAAGAATGCTGTTGAGGAAG+TGG 0.466160 tig0029852:-42308 Msa1442300:CDS
GAGGTTGAGAAGGTTAAAGT+TGG 0.473556 tig0029852:-42607 Msa1442300:CDS
AGAGGAATGTTGAGAAGATG+AGG 0.480560 tig0029852:-43125 Msa1442300:CDS
GTATGAGGTTTCTGTTCAAA+GGG 0.485446 tig0029852:-43187 Msa1442300:CDS
AATTTGGAGTTGCAAGTTGT+GGG 0.486287 tig0029852:-42145 Msa1442300:CDS
ACGGAAACTGTTTGATGAAA+AGG 0.486916 tig0029852:-43094 Msa1442300:CDS
AAACAATGGATTACTGTCTC+AGG 0.487360 tig0029852:-42488 Msa1442300:CDS
GAAGGAAAGGGAAATGATGT+TGG 0.488608 tig0029852:-42785 Msa1442300:CDS
GAATGTTGAGAAGATGAGGT+TGG 0.491925 tig0029852:-43121 Msa1442300:CDS
AGTATGAGGTTTCTGTTCAA+AGG 0.495201 tig0029852:-43188 Msa1442300:CDS
TCTTGGACTTGAGCTGCAGC+AGG 0.495279 tig0029852:-42899 Msa1442300:CDS
GCGTGGGAAGATTCGTGAAA+TGG 0.496463 tig0029852:-42833 Msa1442300:CDS
AAAAGGCTGAGAAAGAAAGA+AGG 0.498100 tig0029852:-43077 Msa1442300:CDS
TGTTCAAAGGGAGAAGATGA+AGG 0.500438 tig0029852:-43175 Msa1442300:CDS
TACTGAATTGAAGCTTAAGC+AGG 0.508643 tig0029852:-42212 Msa1442300:CDS
GAATTTGCAGTCACAAGTTG+TGG 0.509082 tig0029852:-42377 Msa1442300:CDS
GAAGGAGAAGATTGATTTGG+TGG 0.509164 tig0029852:-42980 Msa1442300:CDS
AGTAGCAGCAGAGGTTAAAC+CGG 0.511423 tig0029852:+41682 None:intergenic
GAATTTGGAGTTGCAAGTTG+TGG 0.512655 tig0029852:-42146 Msa1442300:CDS
AGGTTGCTGTGGAGAAGGAA+AGG 0.512829 tig0029852:-42798 Msa1442300:CDS
TATTGAGGTTGCTGTGGAGA+AGG 0.514158 tig0029852:-42803 Msa1442300:CDS
TGAAATGGAGGAAACTATTG+AGG 0.516918 tig0029852:-42818 Msa1442300:CDS
CACATAAAGGTAAGAACTTG+TGG 0.519666 tig0029852:-41706 Msa1442300:CDS
TGTACTGAAGGGTGTTGTAG+AGG 0.520552 tig0029852:-42545 Msa1442300:CDS
TGAGCTGCAGCAGGTTAATG+AGG 0.523686 tig0029852:-42890 Msa1442300:CDS
AGCACAAATAGTAGCAGCAG+AGG 0.529268 tig0029852:+41673 None:intergenic
TTGAGGAAGTGGAGCTTGAG+AGG 0.534554 tig0029852:-42297 Msa1442300:CDS
TTGAGAGTTTGACTGAGGGG+AGG 0.535341 tig0029852:-42717 Msa1442300:CDS
GGATACTGTTTATAGGACTC+TGG 0.536791 tig0029852:-42695 Msa1442300:CDS
CAAGAAAGCATTCAAAGCTA+AGG 0.537974 tig0029852:-41789 Msa1442300:CDS
AATGAGACAAACAAGGAGCT+AGG 0.538433 tig0029852:-42055 Msa1442300:CDS
AATGCGGTTTCTGTGATTGG+TGG 0.539119 tig0029852:+43368 None:intergenic
AGTATTGAGAGTTTGACTGA+GGG 0.540460 tig0029852:-42721 Msa1442300:CDS
AAACCCTAATTCAGTGATCT+GGG 0.540876 tig0029852:+43248 None:intergenic
TGAGAGTTTGACTGAGGGGA+GGG 0.543135 tig0029852:-42716 Msa1442300:CDS
AGAAGATGAGGTTGGATGCA+CGG 0.544378 tig0029852:-43113 Msa1442300:CDS
GGGTCATCATTGGTGGATGG+TGG 0.544512 tig0029852:+43444 None:intergenic
CTTTGAGAAGAACGTTGTTG+AGG 0.544572 tig0029852:+43394 None:intergenic
AAACAAAGTGGAGGATTTGG+AGG 0.546631 tig0029852:-42242 Msa1442300:CDS
GGTGGATGGTGGTGGTTGTG+GGG 0.547005 tig0029852:+43455 None:intergenic
GGTGGTGAAGGAGAAGAAAG+AGG 0.547289 tig0029852:-42962 Msa1442300:CDS
GGTTGGTGAGAAGAAGGAGA+TGG 0.555356 tig0029852:-42749 Msa1442300:CDS
ATTCAAAGCTAAGGATGAGC+TGG 0.556043 tig0029852:-41780 Msa1442300:CDS
AATGAAGAGGCGGTGATGCG+TGG 0.557344 tig0029852:-42850 Msa1442300:CDS
AAAGGCTGAGAAAGAAAGAA+GGG 0.557380 tig0029852:-43076 Msa1442300:CDS
TGAGGAGCTTGAGAAGGACT+GGG 0.558130 tig0029852:-43052 Msa1442300:CDS
AAGGAGAAGAAAGAGGCTGA+GGG 0.558642 tig0029852:-42955 Msa1442300:CDS
CAAAGCTAACCACGCCGCCA+TGG 0.560141 tig0029852:-43334 Msa1442300:CDS
TGAAGGGTGTTGTAGAGGAG+TGG 0.561592 tig0029852:-42540 Msa1442300:CDS
TGAGAGGGATAACGTCAGAA+AGG 0.563589 tig0029852:-42281 Msa1442300:CDS
ATGAAGAGGCGGTGATGCGT+GGG 0.564133 tig0029852:-42849 Msa1442300:CDS
AACAGATGGGTCATCATTGG+TGG 0.564931 tig0029852:+43437 None:intergenic
AAGTATTGAGAGTTTGACTG+AGG 0.565456 tig0029852:-42722 Msa1442300:CDS
TGAGAATGCTGAAGCTGAGT+TGG 0.565780 tig0029852:-42107 Msa1442300:CDS
GAAGGTGATTGATGAGTTGA+AGG 0.567020 tig0029852:-42998 Msa1442300:CDS
TGTGTCTGGAGAGTGAGAAG+AGG 0.568416 tig0029852:-43143 Msa1442300:CDS
TGCAGCTCAAAGAGAGTGCA+AGG 0.569535 tig0029852:-41978 Msa1442300:CDS
ATGTTATAAGAATGCTGTTG+AGG 0.573650 tig0029852:-42314 Msa1442300:CDS
GAGAGGGATAACGTCAGAAA+GGG 0.575443 tig0029852:-42280 Msa1442300:CDS
AAGGGTTGAGGAGCTTGAGA+AGG 0.580524 tig0029852:-43058 Msa1442300:CDS
TTGGAAAATAGTAAATTGGT+TGG 0.582640 tig0029852:-42766 Msa1442300:CDS
GAAGAGCTCGCGGAATGAAG+AGG 0.582918 tig0029852:-42863 Msa1442300:CDS
TGAGAAAGAAAGAAGGGTTG+AGG 0.586230 tig0029852:-43070 Msa1442300:CDS
GGTTGCTGTGGAGAAGGAAA+GGG 0.589431 tig0029852:-42797 Msa1442300:CDS
AAAGGTAAGAACTTGTGGAC+CGG 0.591726 tig0029852:-41701 Msa1442300:CDS
AATGAAGTCGTTAAGTTGCA+AGG 0.591972 tig0029852:-42577 Msa1442300:CDS
GTATTGAGAGTTTGACTGAG+GGG 0.596823 tig0029852:-42720 Msa1442300:CDS
GTCACAAGTTGTGGAAATGG+AGG 0.603940 tig0029852:-42368 Msa1442300:CDS
TAGGCAGCGTGAGGTTGATG+AGG 0.607173 tig0029852:-42647 Msa1442300:CDS
CAAAGCTAAGGATGAGCTGG+TGG 0.611150 tig0029852:-41777 Msa1442300:CDS
TGAGGGTGTGAATAGTACTC+AGG 0.615912 tig0029852:-42938 Msa1442300:CDS
CTTCAACATCCATGGCGGCG+TGG 0.620836 tig0029852:+43325 None:intergenic
TGAGGAAGTGGAGCTTGAGA+GGG 0.621802 tig0029852:-42296 Msa1442300:CDS
TTGACTGCATATGTTGCTAA+AGG 0.622390 tig0029852:-41644 Msa1442300:CDS
AGGTGAAATAAGTGTACTGA+AGG 0.625603 tig0029852:-42557 Msa1442300:CDS
GTTGCAAGTTGTGGGACTGA+AGG 0.629045 tig0029852:-42137 Msa1442300:CDS
GATGGGTCATCATTGGTGGA+TGG 0.631583 tig0029852:+43441 None:intergenic
CAACAGTAAGAAGTTTGATG+AGG 0.631997 tig0029852:-42416 Msa1442300:CDS
TGACGAGGCAACAAATAAGG+TGG 0.639359 tig0029852:-42170 Msa1442300:CDS
ACTCTCTTTGAGCTGCAATG+AGG 0.642172 tig0029852:+41984 None:intergenic
CTTTGAGAAGAAGCTGAATG+CGG 0.642555 tig0029852:+43352 None:intergenic
TGGGAAGATTCGTGAAATGG+AGG 0.643009 tig0029852:-42830 Msa1442300:CDS
GGAAACTATTGAGGTTGCTG+TGG 0.643834 tig0029852:-42809 Msa1442300:CDS
TGCTGAAGCTGAGTTGGTCA+AGG 0.646705 tig0029852:-42101 Msa1442300:CDS
GGCGAGAAGAGCTAGAGATG+AGG 0.648893 tig0029852:-42626 Msa1442300:CDS
CGTTAATCAAAACATCTATG+CGG 0.652889 tig0029852:+42029 None:intergenic
CATCATGAAAAGATATGACG+AGG 0.665707 tig0029852:-42185 Msa1442300:CDS
ACATGCTTCTTCTCACCGCG+AGG 0.668840 tig0029852:+41851 None:intergenic
GAGCTCGCGGAATGAAGAGG+CGG 0.670628 tig0029852:-42860 Msa1442300:CDS
GGGTGTGAATAGTACTCAGG+AGG 0.677679 tig0029852:-42935 Msa1442300:CDS
TCGCGGTGAGAAGAAGCATG+TGG 0.678181 tig0029852:-41849 Msa1442300:CDS
TTTCTCTTCAACATCCATGG+CGG 0.680764 tig0029852:+43320 None:intergenic
GAAGATGAATGAGACAAACA+AGG 0.682202 tig0029852:-42062 Msa1442300:CDS
ATTGGAGAATAGGCAGCGTG+AGG 0.687102 tig0029852:-42656 Msa1442300:CDS
GGTGAAATAAGTGTACTGAA+GGG 0.705436 tig0029852:-42556 Msa1442300:CDS
ACATGTGTCTAAGGAAAGTG+TGG 0.709564 tig0029852:-41882 Msa1442300:CDS
AGTGTGGAAGTGATTCCTCG+CGG 0.788854 tig0029852:-41866 Msa1442300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! GATGTTGGAAAATAGTAAAT+TGG - tig0029852:42380-42399 Msa1442300:CDS 25.0%
! TTGGAAAATAGTAAATTGGT+TGG - tig0029852:42384-42403 Msa1442300:CDS 25.0%
! TGATGAAAAGAAAAACAAAG+TGG - tig0029852:42896-42915 Msa1442300:CDS 25.0%
!!! AGATGTTTTGATTAACGAAA+AGG - tig0029852:43127-43146 Msa1442300:CDS 25.0%
! AATCAATTCAAAGCAAACTT+TGG - tig0029852:43223-43242 Msa1442300:CDS 25.0%
! GATGTTGGAAAATAGTAAAT+TGG - tig0029852:42380-42399 Msa1442300:CDS 25.0%
! TTGGAAAATAGTAAATTGGT+TGG - tig0029852:42384-42403 Msa1442300:CDS 25.0%
! TGATGAAAAGAAAAACAAAG+TGG - tig0029852:42896-42915 Msa1442300:CDS 25.0%
!!! AGATGTTTTGATTAACGAAA+AGG - tig0029852:43127-43146 Msa1442300:CDS 25.0%
! AATCAATTCAAAGCAAACTT+TGG - tig0029852:43223-43242 Msa1442300:CDS 25.0%
! GGTATTTGTTCCTTTCTTTT+TGG + tig0029852:41644-41663 None:intergenic 30.0%
! GATTTTGAATCTGAACAGAT+GGG + tig0029852:41729-41748 None:intergenic 30.0%
! AGATTTTGAATCTGAACAGA+TGG + tig0029852:41730-41749 None:intergenic 30.0%
! ATTTTTCTCTTCAACATCCA+TGG + tig0029852:41836-41855 None:intergenic 30.0%
! CAAAGAAAACATCGTTTTGA+AGG + tig0029852:41870-41889 None:intergenic 30.0%
GAAAAATGAGATTGAGTATG+AGG - tig0029852:41948-41967 Msa1442300:CDS 30.0%
! TGTGAAGAAGTCAATTTTGT+CGG - tig0029852:42128-42147 Msa1442300:CDS 30.0%
TTAAGAGAGAATTGGAGAAT+AGG - tig0029852:42484-42503 Msa1442300:CDS 30.0%
TGTCTCAGGTTAATCATTAT+AGG - tig0029852:42676-42695 Msa1442300:CDS 30.0%
ATGTTATAAGAATGCTGTTG+AGG - tig0029852:42836-42855 Msa1442300:CDS 30.0%
TGAAAAGAAAAACAAAGTGG+AGG - tig0029852:42899-42918 Msa1442300:CDS 30.0%
AACAAATAAGGTGGAGAATT+TGG - tig0029852:42989-43008 Msa1442300:CDS 30.0%
CGTTAATCAAAACATCTATG+CGG + tig0029852:43124-43143 None:intergenic 30.0%
! GGTATTTGTTCCTTTCTTTT+TGG + tig0029852:41644-41663 None:intergenic 30.0%
! GATTTTGAATCTGAACAGAT+GGG + tig0029852:41729-41748 None:intergenic 30.0%
! AGATTTTGAATCTGAACAGA+TGG + tig0029852:41730-41749 None:intergenic 30.0%
! ATTTTTCTCTTCAACATCCA+TGG + tig0029852:41836-41855 None:intergenic 30.0%
! CAAAGAAAACATCGTTTTGA+AGG + tig0029852:41870-41889 None:intergenic 30.0%
GAAAAATGAGATTGAGTATG+AGG - tig0029852:41948-41967 Msa1442300:CDS 30.0%
! TGTGAAGAAGTCAATTTTGT+CGG - tig0029852:42128-42147 Msa1442300:CDS 30.0%
TTAAGAGAGAATTGGAGAAT+AGG - tig0029852:42484-42503 Msa1442300:CDS 30.0%
TGTCTCAGGTTAATCATTAT+AGG - tig0029852:42676-42695 Msa1442300:CDS 30.0%
ATGTTATAAGAATGCTGTTG+AGG - tig0029852:42836-42855 Msa1442300:CDS 30.0%
TGAAAAGAAAAACAAAGTGG+AGG - tig0029852:42899-42918 Msa1442300:CDS 30.0%
AACAAATAAGGTGGAGAATT+TGG - tig0029852:42989-43008 Msa1442300:CDS 30.0%
CGTTAATCAAAACATCTATG+CGG + tig0029852:43124-43143 None:intergenic 30.0%
AAACCCTAATTCAGTGATCT+GGG + tig0029852:41905-41924 None:intergenic 35.0%
AGTATGAGGTTTCTGTTCAA+AGG - tig0029852:41962-41981 Msa1442300:CDS 35.0%
GTATGAGGTTTCTGTTCAAA+GGG - tig0029852:41963-41982 Msa1442300:CDS 35.0%
ACGGAAACTGTTTGATGAAA+AGG - tig0029852:42056-42075 Msa1442300:CDS 35.0%
AAAAGGCTGAGAAAGAAAGA+AGG - tig0029852:42073-42092 Msa1442300:CDS 35.0%
AAAGGCTGAGAAAGAAAGAA+GGG - tig0029852:42074-42093 Msa1442300:CDS 35.0%
GTTGAAGGAGAAGATTGATT+TGG - tig0029852:42167-42186 Msa1442300:CDS 35.0%
! GAGGTGAAGATTTTCAATCT+TGG - tig0029852:42234-42253 Msa1442300:CDS 35.0%
TGAAATGGAGGAAACTATTG+AGG - tig0029852:42332-42351 Msa1442300:CDS 35.0%
!! TAAATTGGTTGGTGAGAAGA+AGG - tig0029852:42395-42414 Msa1442300:CDS 35.0%
!! AAGTATTGAGAGTTTGACTG+AGG - tig0029852:42428-42447 Msa1442300:CDS 35.0%
! AGTATTGAGAGTTTGACTGA+GGG - tig0029852:42429-42448 Msa1442300:CDS 35.0%
TGTTTATAGGACTCTGGATA+TGG - tig0029852:42461-42480 Msa1442300:CDS 35.0%
GGATATGGTTAAGAGAGAAT+TGG - tig0029852:42476-42495 Msa1442300:CDS 35.0%
! AATGAAGTCGTTAAGTTGCA+AGG - tig0029852:42573-42592 Msa1442300:CDS 35.0%
AGGTGAAATAAGTGTACTGA+AGG - tig0029852:42593-42612 Msa1442300:CDS 35.0%
GGTGAAATAAGTGTACTGAA+GGG - tig0029852:42594-42613 Msa1442300:CDS 35.0%
AAAATTGTAGCTAGAGAGTC+TGG - tig0029852:42633-42652 Msa1442300:CDS 35.0%
!! AAACAATGGATTACTGTCTC+AGG - tig0029852:42662-42681 Msa1442300:CDS 35.0%
CAACAGTAAGAAGTTTGATG+AGG - tig0029852:42734-42753 Msa1442300:CDS 35.0%
TGATGAGGAGAAAAAGAAAG+TGG - tig0029852:42749-42768 Msa1442300:CDS 35.0%
GAAAAACAAAGTGGAGGATT+TGG - tig0029852:42905-42924 Msa1442300:CDS 35.0%
TACTGAATTGAAGCTTAAGC+AGG - tig0029852:42938-42957 Msa1442300:CDS 35.0%
! CTCGTCATATCTTTTCATGA+TGG + tig0029852:42967-42986 None:intergenic 35.0%
CATCATGAAAAGATATGACG+AGG - tig0029852:42965-42984 Msa1442300:CDS 35.0%
ATATGACGAGGCAACAAATA+AGG - tig0029852:42977-42996 Msa1442300:CDS 35.0%
! AATTTGGAGTTGCAAGTTGT+GGG - tig0029852:43005-43024 Msa1442300:CDS 35.0%
GAAGATGAATGAGACAAACA+AGG - tig0029852:43088-43107 Msa1442300:CDS 35.0%
!! CAAGAAAGCATTCAAAGCTA+AGG - tig0029852:43361-43380 Msa1442300:CDS 35.0%
CACATAAAGGTAAGAACTTG+TGG - tig0029852:43444-43463 Msa1442300:CDS 35.0%
TTGACTGCATATGTTGCTAA+AGG - tig0029852:43506-43525 Msa1442300:CDS 35.0%
AAACCCTAATTCAGTGATCT+GGG + tig0029852:41905-41924 None:intergenic 35.0%
AGTATGAGGTTTCTGTTCAA+AGG - tig0029852:41962-41981 Msa1442300:CDS 35.0%
GTATGAGGTTTCTGTTCAAA+GGG - tig0029852:41963-41982 Msa1442300:CDS 35.0%
ACGGAAACTGTTTGATGAAA+AGG - tig0029852:42056-42075 Msa1442300:CDS 35.0%
AAAAGGCTGAGAAAGAAAGA+AGG - tig0029852:42073-42092 Msa1442300:CDS 35.0%
AAAGGCTGAGAAAGAAAGAA+GGG - tig0029852:42074-42093 Msa1442300:CDS 35.0%
GTTGAAGGAGAAGATTGATT+TGG - tig0029852:42167-42186 Msa1442300:CDS 35.0%
! GAGGTGAAGATTTTCAATCT+TGG - tig0029852:42234-42253 Msa1442300:CDS 35.0%
TGAAATGGAGGAAACTATTG+AGG - tig0029852:42332-42351 Msa1442300:CDS 35.0%
!! TAAATTGGTTGGTGAGAAGA+AGG - tig0029852:42395-42414 Msa1442300:CDS 35.0%
!! AAGTATTGAGAGTTTGACTG+AGG - tig0029852:42428-42447 Msa1442300:CDS 35.0%
! AGTATTGAGAGTTTGACTGA+GGG - tig0029852:42429-42448 Msa1442300:CDS 35.0%
TGTTTATAGGACTCTGGATA+TGG - tig0029852:42461-42480 Msa1442300:CDS 35.0%
GGATATGGTTAAGAGAGAAT+TGG - tig0029852:42476-42495 Msa1442300:CDS 35.0%
! AATGAAGTCGTTAAGTTGCA+AGG - tig0029852:42573-42592 Msa1442300:CDS 35.0%
AGGTGAAATAAGTGTACTGA+AGG - tig0029852:42593-42612 Msa1442300:CDS 35.0%
GGTGAAATAAGTGTACTGAA+GGG - tig0029852:42594-42613 Msa1442300:CDS 35.0%
AAAATTGTAGCTAGAGAGTC+TGG - tig0029852:42633-42652 Msa1442300:CDS 35.0%
!! AAACAATGGATTACTGTCTC+AGG - tig0029852:42662-42681 Msa1442300:CDS 35.0%
CAACAGTAAGAAGTTTGATG+AGG - tig0029852:42734-42753 Msa1442300:CDS 35.0%
TGATGAGGAGAAAAAGAAAG+TGG - tig0029852:42749-42768 Msa1442300:CDS 35.0%
GAAAAACAAAGTGGAGGATT+TGG - tig0029852:42905-42924 Msa1442300:CDS 35.0%
TACTGAATTGAAGCTTAAGC+AGG - tig0029852:42938-42957 Msa1442300:CDS 35.0%
! CTCGTCATATCTTTTCATGA+TGG + tig0029852:42967-42986 None:intergenic 35.0%
CATCATGAAAAGATATGACG+AGG - tig0029852:42965-42984 Msa1442300:CDS 35.0%
ATATGACGAGGCAACAAATA+AGG - tig0029852:42977-42996 Msa1442300:CDS 35.0%
! AATTTGGAGTTGCAAGTTGT+GGG - tig0029852:43005-43024 Msa1442300:CDS 35.0%
GAAGATGAATGAGACAAACA+AGG - tig0029852:43088-43107 Msa1442300:CDS 35.0%
!! CAAGAAAGCATTCAAAGCTA+AGG - tig0029852:43361-43380 Msa1442300:CDS 35.0%
CACATAAAGGTAAGAACTTG+TGG - tig0029852:43444-43463 Msa1442300:CDS 35.0%
TTGACTGCATATGTTGCTAA+AGG - tig0029852:43506-43525 Msa1442300:CDS 35.0%
!! GGTTAAGGTTTTGTGGTCTA+GGG + tig0029852:41677-41696 None:intergenic 40.0%
! CTTTGAGAAGAACGTTGTTG+AGG + tig0029852:41759-41778 None:intergenic 40.0%
! CTTTGAGAAGAAGCTGAATG+CGG + tig0029852:41801-41820 None:intergenic 40.0%
TTTCTCTTCAACATCCATGG+CGG + tig0029852:41833-41852 None:intergenic 40.0%
TGAAGAGAAAAATCTCGCCT+TGG - tig0029852:41843-41862 Msa1442300:CDS 40.0%
!!! AACATCGTTTTGAAGGTCCA+AGG + tig0029852:41863-41882 None:intergenic 40.0%
AGACCCAGATCACTGAATTA+GGG - tig0029852:41899-41918 Msa1442300:CDS 40.0%
GAAACCCTAATTCAGTGATC+TGG + tig0029852:41906-41925 None:intergenic 40.0%
TGTTCAAAGGGAGAAGATGA+AGG - tig0029852:41975-41994 Msa1442300:CDS 40.0%
AGGGAGAAGATGAAGGATTT+AGG - tig0029852:41982-42001 Msa1442300:CDS 40.0%
GGGAGAAGATGAAGGATTTA+GGG - tig0029852:41983-42002 Msa1442300:CDS 40.0%
AGAGGAATGTTGAGAAGATG+AGG - tig0029852:42025-42044 Msa1442300:CDS 40.0%
GAATGTTGAGAAGATGAGGT+TGG - tig0029852:42029-42048 Msa1442300:CDS 40.0%
TGAGAAAGAAAGAAGGGTTG+AGG - tig0029852:42080-42099 Msa1442300:CDS 40.0%
! GAAGTCAATTTTGTCGGTGA+AGG - tig0029852:42134-42153 Msa1442300:CDS 40.0%
! GAAGGTGATTGATGAGTTGA+AGG - tig0029852:42152-42171 Msa1442300:CDS 40.0%
!! GAAGGAGAAGATTGATTTGG+TGG - tig0029852:42170-42189 Msa1442300:CDS 40.0%
!! GAAGATTGATTTGGTGGTGA+AGG - tig0029852:42176-42195 Msa1442300:CDS 40.0%
GAAGGAAAGGGAAATGATGT+TGG - tig0029852:42365-42384 Msa1442300:CDS 40.0%
GTATTGAGAGTTTGACTGAG+GGG - tig0029852:42430-42449 Msa1442300:CDS 40.0%
GGATACTGTTTATAGGACTC+TGG - tig0029852:42455-42474 Msa1442300:CDS 40.0%
GAGGTTGAGAAGGTTAAAGT+TGG - tig0029852:42543-42562 Msa1442300:CDS 40.0%
GAGTCTGGAGAGAAAAACAA+TGG - tig0029852:42648-42667 Msa1442300:CDS 40.0%
GAATTTGCAGTCACAAGTTG+TGG - tig0029852:42773-42792 Msa1442300:CDS 40.0%
TAAGAATGCTGTTGAGGAAG+TGG - tig0029852:42842-42861 Msa1442300:CDS 40.0%
AAACAAAGTGGAGGATTTGG+AGG - tig0029852:42908-42927 Msa1442300:CDS 40.0%
! GAATTTGGAGTTGCAAGTTG+TGG - tig0029852:43004-43023 Msa1442300:CDS 40.0%
AATGAGACAAACAAGGAGCT+AGG - tig0029852:43095-43114 Msa1442300:CDS 40.0%
ACATGTGTCTAAGGAAAGTG+TGG - tig0029852:43268-43287 Msa1442300:CDS 40.0%
! GTCTTTTGCTGAAGAACTTG+AGG - tig0029852:43334-43353 Msa1442300:CDS 40.0%
ATTCAAAGCTAAGGATGAGC+TGG - tig0029852:43370-43389 Msa1442300:CDS 40.0%
AAAGGTAAGAACTTGTGGAC+CGG - tig0029852:43449-43468 Msa1442300:CDS 40.0%
!! GGTTAAGGTTTTGTGGTCTA+GGG + tig0029852:41677-41696 None:intergenic 40.0%
! CTTTGAGAAGAACGTTGTTG+AGG + tig0029852:41759-41778 None:intergenic 40.0%
! CTTTGAGAAGAAGCTGAATG+CGG + tig0029852:41801-41820 None:intergenic 40.0%
TTTCTCTTCAACATCCATGG+CGG + tig0029852:41833-41852 None:intergenic 40.0%
TGAAGAGAAAAATCTCGCCT+TGG - tig0029852:41843-41862 Msa1442300:CDS 40.0%
!!! AACATCGTTTTGAAGGTCCA+AGG + tig0029852:41863-41882 None:intergenic 40.0%
AGACCCAGATCACTGAATTA+GGG - tig0029852:41899-41918 Msa1442300:CDS 40.0%
GAAACCCTAATTCAGTGATC+TGG + tig0029852:41906-41925 None:intergenic 40.0%
TGTTCAAAGGGAGAAGATGA+AGG - tig0029852:41975-41994 Msa1442300:CDS 40.0%
AGGGAGAAGATGAAGGATTT+AGG - tig0029852:41982-42001 Msa1442300:CDS 40.0%
GGGAGAAGATGAAGGATTTA+GGG - tig0029852:41983-42002 Msa1442300:CDS 40.0%
AGAGGAATGTTGAGAAGATG+AGG - tig0029852:42025-42044 Msa1442300:CDS 40.0%
GAATGTTGAGAAGATGAGGT+TGG - tig0029852:42029-42048 Msa1442300:CDS 40.0%
TGAGAAAGAAAGAAGGGTTG+AGG - tig0029852:42080-42099 Msa1442300:CDS 40.0%
! GAAGTCAATTTTGTCGGTGA+AGG - tig0029852:42134-42153 Msa1442300:CDS 40.0%
! GAAGGTGATTGATGAGTTGA+AGG - tig0029852:42152-42171 Msa1442300:CDS 40.0%
!! GAAGGAGAAGATTGATTTGG+TGG - tig0029852:42170-42189 Msa1442300:CDS 40.0%
!! GAAGATTGATTTGGTGGTGA+AGG - tig0029852:42176-42195 Msa1442300:CDS 40.0%
GAAGGAAAGGGAAATGATGT+TGG - tig0029852:42365-42384 Msa1442300:CDS 40.0%
GTATTGAGAGTTTGACTGAG+GGG - tig0029852:42430-42449 Msa1442300:CDS 40.0%
GGATACTGTTTATAGGACTC+TGG - tig0029852:42455-42474 Msa1442300:CDS 40.0%
GAGGTTGAGAAGGTTAAAGT+TGG - tig0029852:42543-42562 Msa1442300:CDS 40.0%
GAGTCTGGAGAGAAAAACAA+TGG - tig0029852:42648-42667 Msa1442300:CDS 40.0%
GAATTTGCAGTCACAAGTTG+TGG - tig0029852:42773-42792 Msa1442300:CDS 40.0%
TAAGAATGCTGTTGAGGAAG+TGG - tig0029852:42842-42861 Msa1442300:CDS 40.0%
AAACAAAGTGGAGGATTTGG+AGG - tig0029852:42908-42927 Msa1442300:CDS 40.0%
! GAATTTGGAGTTGCAAGTTG+TGG - tig0029852:43004-43023 Msa1442300:CDS 40.0%
AATGAGACAAACAAGGAGCT+AGG - tig0029852:43095-43114 Msa1442300:CDS 40.0%
ACATGTGTCTAAGGAAAGTG+TGG - tig0029852:43268-43287 Msa1442300:CDS 40.0%
! GTCTTTTGCTGAAGAACTTG+AGG - tig0029852:43334-43353 Msa1442300:CDS 40.0%
ATTCAAAGCTAAGGATGAGC+TGG - tig0029852:43370-43389 Msa1442300:CDS 40.0%
AAAGGTAAGAACTTGTGGAC+CGG - tig0029852:43449-43468 Msa1442300:CDS 40.0%
! GTGGTCTAGGGTTTGAGATT+GGG + tig0029852:41665-41684 None:intergenic 45.0%
! TGTGGTCTAGGGTTTGAGAT+TGG + tig0029852:41666-41685 None:intergenic 45.0%
!! GGGTTAAGGTTTTGTGGTCT+AGG + tig0029852:41678-41697 None:intergenic 45.0%
! GTTGTGGGGTTAAGGTTTTG+TGG + tig0029852:41684-41703 None:intergenic 45.0%
AACAGATGGGTCATCATTGG+TGG + tig0029852:41716-41735 None:intergenic 45.0%
CTGAACAGATGGGTCATCAT+TGG + tig0029852:41719-41738 None:intergenic 45.0%
AATGCGGTTTCTGTGATTGG+TGG + tig0029852:41785-41804 None:intergenic 45.0%
CTGAATGCGGTTTCTGTGAT+TGG + tig0029852:41788-41807 None:intergenic 45.0%
CAGACCCAGATCACTGAATT+AGG - tig0029852:41898-41917 Msa1442300:CDS 45.0%
! GAAGGATTTAGGGTTGTGTC+TGG - tig0029852:41993-42012 Msa1442300:CDS 45.0%
AGAAGATGAGGTTGGATGCA+CGG - tig0029852:42037-42056 Msa1442300:CDS 45.0%
AAGGAGAAGAAAGAGGCTGA+GGG - tig0029852:42195-42214 Msa1442300:CDS 45.0%
! TGAGGGTGTGAATAGTACTC+AGG - tig0029852:42212-42231 Msa1442300:CDS 45.0%
!!! ATGAGGTTTTGAAGAGCTCG+CGG - tig0029852:42277-42296 Msa1442300:CDS 45.0%
TGGGAAGATTCGTGAAATGG+AGG - tig0029852:42320-42339 Msa1442300:CDS 45.0%
GGAAACTATTGAGGTTGCTG+TGG - tig0029852:42341-42360 Msa1442300:CDS 45.0%
TATTGAGGTTGCTGTGGAGA+AGG - tig0029852:42347-42366 Msa1442300:CDS 45.0%
AGGGGAGGGATACTGTTTAT+AGG - tig0029852:42448-42467 Msa1442300:CDS 45.0%
AGCTAGAGATGAGGTTGAGA+AGG - tig0029852:42533-42552 Msa1442300:CDS 45.0%
!! TGTACTGAAGGGTGTTGTAG+AGG - tig0029852:42605-42624 Msa1442300:CDS 45.0%
GCAGTCACAAGTTGTGGAAA+TGG - tig0029852:42779-42798 Msa1442300:CDS 45.0%
GTCACAAGTTGTGGAAATGG+AGG - tig0029852:42782-42801 Msa1442300:CDS 45.0%
TGAGAGGGATAACGTCAGAA+AGG - tig0029852:42869-42888 Msa1442300:CDS 45.0%
GAGAGGGATAACGTCAGAAA+GGG - tig0029852:42870-42889 Msa1442300:CDS 45.0%
TGACGAGGCAACAAATAAGG+TGG - tig0029852:42980-42999 Msa1442300:CDS 45.0%
TGAGAATGCTGAAGCTGAGT+TGG - tig0029852:43043-43062 Msa1442300:CDS 45.0%
ACTCTCTTTGAGCTGCAATG+AGG + tig0029852:43169-43188 None:intergenic 45.0%
CACTGTTGCACATGTGTCTA+AGG - tig0029852:43259-43278 Msa1442300:CDS 45.0%
TCTGCGTCTGATGCACATAA+AGG - tig0029852:43431-43450 Msa1442300:CDS 45.0%
AGTAGCAGCAGAGGTTAAAC+CGG + tig0029852:43471-43490 None:intergenic 45.0%
AGCACAAATAGTAGCAGCAG+AGG + tig0029852:43480-43499 None:intergenic 45.0%
! GTGGTCTAGGGTTTGAGATT+GGG + tig0029852:41665-41684 None:intergenic 45.0%
! TGTGGTCTAGGGTTTGAGAT+TGG + tig0029852:41666-41685 None:intergenic 45.0%
!! GGGTTAAGGTTTTGTGGTCT+AGG + tig0029852:41678-41697 None:intergenic 45.0%
! GTTGTGGGGTTAAGGTTTTG+TGG + tig0029852:41684-41703 None:intergenic 45.0%
AACAGATGGGTCATCATTGG+TGG + tig0029852:41716-41735 None:intergenic 45.0%
CTGAACAGATGGGTCATCAT+TGG + tig0029852:41719-41738 None:intergenic 45.0%
AATGCGGTTTCTGTGATTGG+TGG + tig0029852:41785-41804 None:intergenic 45.0%
CTGAATGCGGTTTCTGTGAT+TGG + tig0029852:41788-41807 None:intergenic 45.0%
CAGACCCAGATCACTGAATT+AGG - tig0029852:41898-41917 Msa1442300:CDS 45.0%
! GAAGGATTTAGGGTTGTGTC+TGG - tig0029852:41993-42012 Msa1442300:CDS 45.0%
AGAAGATGAGGTTGGATGCA+CGG - tig0029852:42037-42056 Msa1442300:CDS 45.0%
AAGGAGAAGAAAGAGGCTGA+GGG - tig0029852:42195-42214 Msa1442300:CDS 45.0%
! TGAGGGTGTGAATAGTACTC+AGG - tig0029852:42212-42231 Msa1442300:CDS 45.0%
!!! ATGAGGTTTTGAAGAGCTCG+CGG - tig0029852:42277-42296 Msa1442300:CDS 45.0%
TGGGAAGATTCGTGAAATGG+AGG - tig0029852:42320-42339 Msa1442300:CDS 45.0%
GGAAACTATTGAGGTTGCTG+TGG - tig0029852:42341-42360 Msa1442300:CDS 45.0%
TATTGAGGTTGCTGTGGAGA+AGG - tig0029852:42347-42366 Msa1442300:CDS 45.0%
AGGGGAGGGATACTGTTTAT+AGG - tig0029852:42448-42467 Msa1442300:CDS 45.0%
AGCTAGAGATGAGGTTGAGA+AGG - tig0029852:42533-42552 Msa1442300:CDS 45.0%
!! TGTACTGAAGGGTGTTGTAG+AGG - tig0029852:42605-42624 Msa1442300:CDS 45.0%
GCAGTCACAAGTTGTGGAAA+TGG - tig0029852:42779-42798 Msa1442300:CDS 45.0%
GTCACAAGTTGTGGAAATGG+AGG - tig0029852:42782-42801 Msa1442300:CDS 45.0%
TGAGAGGGATAACGTCAGAA+AGG - tig0029852:42869-42888 Msa1442300:CDS 45.0%
GAGAGGGATAACGTCAGAAA+GGG - tig0029852:42870-42889 Msa1442300:CDS 45.0%
TGACGAGGCAACAAATAAGG+TGG - tig0029852:42980-42999 Msa1442300:CDS 45.0%
TGAGAATGCTGAAGCTGAGT+TGG - tig0029852:43043-43062 Msa1442300:CDS 45.0%
ACTCTCTTTGAGCTGCAATG+AGG + tig0029852:43169-43188 None:intergenic 45.0%
CACTGTTGCACATGTGTCTA+AGG - tig0029852:43259-43278 Msa1442300:CDS 45.0%
TCTGCGTCTGATGCACATAA+AGG - tig0029852:43431-43450 Msa1442300:CDS 45.0%
AGTAGCAGCAGAGGTTAAAC+CGG + tig0029852:43471-43490 None:intergenic 45.0%
AGCACAAATAGTAGCAGCAG+AGG + tig0029852:43480-43499 None:intergenic 45.0%
! TCATCATTGGTGGATGGTGG+TGG + tig0029852:41706-41725 None:intergenic 50.0%
GATGGGTCATCATTGGTGGA+TGG + tig0029852:41712-41731 None:intergenic 50.0%
TGTGTCTGGAGAGTGAGAAG+AGG - tig0029852:42007-42026 Msa1442300:CDS 50.0%
AAGGGTTGAGGAGCTTGAGA+AGG - tig0029852:42092-42111 Msa1442300:CDS 50.0%
TTGAGGAGCTTGAGAAGGAC+TGG - tig0029852:42097-42116 Msa1442300:CDS 50.0%
TGAGGAGCTTGAGAAGGACT+GGG - tig0029852:42098-42117 Msa1442300:CDS 50.0%
GCTTGAGAAGGACTGGGATT+TGG - tig0029852:42104-42123 Msa1442300:CDS 50.0%
GGTGGTGAAGGAGAAGAAAG+AGG - tig0029852:42188-42207 Msa1442300:CDS 50.0%
GAAGGAGAAGAAAGAGGCTG+AGG - tig0029852:42194-42213 Msa1442300:CDS 50.0%
GGGTGTGAATAGTACTCAGG+AGG - tig0029852:42215-42234 Msa1442300:CDS 50.0%
TGAGCTGCAGCAGGTTAATG+AGG - tig0029852:42260-42279 Msa1442300:CDS 50.0%
GCGTGGGAAGATTCGTGAAA+TGG - tig0029852:42317-42336 Msa1442300:CDS 50.0%
AGGTTGCTGTGGAGAAGGAA+AGG - tig0029852:42352-42371 Msa1442300:CDS 50.0%
GGTTGCTGTGGAGAAGGAAA+GGG - tig0029852:42353-42372 Msa1442300:CDS 50.0%
!! GGTTGGTGAGAAGAAGGAGA+TGG - tig0029852:42401-42420 Msa1442300:CDS 50.0%
TTGAGAGTTTGACTGAGGGG+AGG - tig0029852:42433-42452 Msa1442300:CDS 50.0%
TGAGAGTTTGACTGAGGGGA+GGG - tig0029852:42434-42453 Msa1442300:CDS 50.0%
ATTGGAGAATAGGCAGCGTG+AGG - tig0029852:42494-42513 Msa1442300:CDS 50.0%
!! TGAAGGGTGTTGTAGAGGAG+TGG - tig0029852:42610-42629 Msa1442300:CDS 50.0%
TTGAGGAAGTGGAGCTTGAG+AGG - tig0029852:42853-42872 Msa1442300:CDS 50.0%
TGAGGAAGTGGAGCTTGAGA+GGG - tig0029852:42854-42873 Msa1442300:CDS 50.0%
GTTGCAAGTTGTGGGACTGA+AGG - tig0029852:43013-43032 Msa1442300:CDS 50.0%
!! TGCTGAAGCTGAGTTGGTCA+AGG - tig0029852:43049-43068 Msa1442300:CDS 50.0%
! TGCAGCTCAAAGAGAGTGCA+AGG - tig0029852:43172-43191 Msa1442300:CDS 50.0%
AGTGTGGAAGTGATTCCTCG+CGG - tig0029852:43284-43303 Msa1442300:CDS 50.0%
CAAAGCTAAGGATGAGCTGG+TGG - tig0029852:43373-43392 Msa1442300:CDS 50.0%
! TCATCATTGGTGGATGGTGG+TGG + tig0029852:41706-41725 None:intergenic 50.0%
GATGGGTCATCATTGGTGGA+TGG + tig0029852:41712-41731 None:intergenic 50.0%
TGTGTCTGGAGAGTGAGAAG+AGG - tig0029852:42007-42026 Msa1442300:CDS 50.0%
AAGGGTTGAGGAGCTTGAGA+AGG - tig0029852:42092-42111 Msa1442300:CDS 50.0%
TTGAGGAGCTTGAGAAGGAC+TGG - tig0029852:42097-42116 Msa1442300:CDS 50.0%
TGAGGAGCTTGAGAAGGACT+GGG - tig0029852:42098-42117 Msa1442300:CDS 50.0%
GCTTGAGAAGGACTGGGATT+TGG - tig0029852:42104-42123 Msa1442300:CDS 50.0%
GGTGGTGAAGGAGAAGAAAG+AGG - tig0029852:42188-42207 Msa1442300:CDS 50.0%
GAAGGAGAAGAAAGAGGCTG+AGG - tig0029852:42194-42213 Msa1442300:CDS 50.0%
GGGTGTGAATAGTACTCAGG+AGG - tig0029852:42215-42234 Msa1442300:CDS 50.0%
TGAGCTGCAGCAGGTTAATG+AGG - tig0029852:42260-42279 Msa1442300:CDS 50.0%
GCGTGGGAAGATTCGTGAAA+TGG - tig0029852:42317-42336 Msa1442300:CDS 50.0%
AGGTTGCTGTGGAGAAGGAA+AGG - tig0029852:42352-42371 Msa1442300:CDS 50.0%
GGTTGCTGTGGAGAAGGAAA+GGG - tig0029852:42353-42372 Msa1442300:CDS 50.0%
!! GGTTGGTGAGAAGAAGGAGA+TGG - tig0029852:42401-42420 Msa1442300:CDS 50.0%
TTGAGAGTTTGACTGAGGGG+AGG - tig0029852:42433-42452 Msa1442300:CDS 50.0%
TGAGAGTTTGACTGAGGGGA+GGG - tig0029852:42434-42453 Msa1442300:CDS 50.0%
ATTGGAGAATAGGCAGCGTG+AGG - tig0029852:42494-42513 Msa1442300:CDS 50.0%
!! TGAAGGGTGTTGTAGAGGAG+TGG - tig0029852:42610-42629 Msa1442300:CDS 50.0%
TTGAGGAAGTGGAGCTTGAG+AGG - tig0029852:42853-42872 Msa1442300:CDS 50.0%
TGAGGAAGTGGAGCTTGAGA+GGG - tig0029852:42854-42873 Msa1442300:CDS 50.0%
GTTGCAAGTTGTGGGACTGA+AGG - tig0029852:43013-43032 Msa1442300:CDS 50.0%
!! TGCTGAAGCTGAGTTGGTCA+AGG - tig0029852:43049-43068 Msa1442300:CDS 50.0%
! TGCAGCTCAAAGAGAGTGCA+AGG - tig0029852:43172-43191 Msa1442300:CDS 50.0%
AGTGTGGAAGTGATTCCTCG+CGG - tig0029852:43284-43303 Msa1442300:CDS 50.0%
CAAAGCTAAGGATGAGCTGG+TGG - tig0029852:43373-43392 Msa1442300:CDS 50.0%
!! TGGTGGTGGTTGTGGGGTTA+AGG + tig0029852:41692-41711 None:intergenic 55.0%
!! TGGTGGATGGTGGTGGTTGT+GGG + tig0029852:41699-41718 None:intergenic 55.0%
!! TTGGTGGATGGTGGTGGTTG+TGG + tig0029852:41700-41719 None:intergenic 55.0%
! GGGTCATCATTGGTGGATGG+TGG + tig0029852:41709-41728 None:intergenic 55.0%
TCTTGGACTTGAGCTGCAGC+AGG - tig0029852:42251-42270 Msa1442300:CDS 55.0%
GAAGAGCTCGCGGAATGAAG+AGG - tig0029852:42287-42306 Msa1442300:CDS 55.0%
AATGAAGAGGCGGTGATGCG+TGG - tig0029852:42300-42319 Msa1442300:CDS 55.0%
ATGAAGAGGCGGTGATGCGT+GGG - tig0029852:42301-42320 Msa1442300:CDS 55.0%
!! TAGGCAGCGTGAGGTTGATG+AGG - tig0029852:42503-42522 Msa1442300:CDS 55.0%
GGCGAGAAGAGCTAGAGATG+AGG - tig0029852:42524-42543 Msa1442300:CDS 55.0%
ACATGCTTCTTCTCACCGCG+AGG + tig0029852:43302-43321 None:intergenic 55.0%
! TCGCGGTGAGAAGAAGCATG+TGG - tig0029852:43301-43320 Msa1442300:CDS 55.0%
!! TGGTGGTGGTTGTGGGGTTA+AGG + tig0029852:41692-41711 None:intergenic 55.0%
!! TGGTGGATGGTGGTGGTTGT+GGG + tig0029852:41699-41718 None:intergenic 55.0%
!! TTGGTGGATGGTGGTGGTTG+TGG + tig0029852:41700-41719 None:intergenic 55.0%
! GGGTCATCATTGGTGGATGG+TGG + tig0029852:41709-41728 None:intergenic 55.0%
TCTTGGACTTGAGCTGCAGC+AGG - tig0029852:42251-42270 Msa1442300:CDS 55.0%
GAAGAGCTCGCGGAATGAAG+AGG - tig0029852:42287-42306 Msa1442300:CDS 55.0%
AATGAAGAGGCGGTGATGCG+TGG - tig0029852:42300-42319 Msa1442300:CDS 55.0%
ATGAAGAGGCGGTGATGCGT+GGG - tig0029852:42301-42320 Msa1442300:CDS 55.0%
!! TAGGCAGCGTGAGGTTGATG+AGG - tig0029852:42503-42522 Msa1442300:CDS 55.0%
GGCGAGAAGAGCTAGAGATG+AGG - tig0029852:42524-42543 Msa1442300:CDS 55.0%
ACATGCTTCTTCTCACCGCG+AGG + tig0029852:43302-43321 None:intergenic 55.0%
! TCGCGGTGAGAAGAAGCATG+TGG - tig0029852:43301-43320 Msa1442300:CDS 55.0%
!! GGTGGATGGTGGTGGTTGTG+GGG + tig0029852:41698-41717 None:intergenic 60.0%
CAAAGCTAACCACGCCGCCA+TGG - tig0029852:41816-41835 Msa1442300:CDS 60.0%
CTTCAACATCCATGGCGGCG+TGG + tig0029852:41828-41847 None:intergenic 60.0%
GAGCTCGCGGAATGAAGAGG+CGG - tig0029852:42290-42309 Msa1442300:CDS 60.0%
!! GGTGGATGGTGGTGGTTGTG+GGG + tig0029852:41698-41717 None:intergenic 60.0%
CAAAGCTAACCACGCCGCCA+TGG - tig0029852:41816-41835 Msa1442300:CDS 60.0%
CTTCAACATCCATGGCGGCG+TGG + tig0029852:41828-41847 None:intergenic 60.0%
GAGCTCGCGGAATGAAGAGG+CGG - tig0029852:42290-42309 Msa1442300:CDS 60.0%
Chromosome Type Strat End Strand Name
tig0029852 gene 41637 43535 41637 ID=Msa1442300;Name=Msa1442300
tig0029852 mRNA 41637 43535 41637 ID=Msa1442300-mRNA-1;Parent=Msa1442300;Name=Msa1442300-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|632
tig0029852 exon 41637 43535 41637 ID=Msa1442300-mRNA-1:exon:13258;Parent=Msa1442300-mRNA-1
tig0029852 CDS 41637 43535 41637 ID=Msa1442300-mRNA-1:cds;Parent=Msa1442300-mRNA-1
Gene Sequence

>Msa1442300

ATGGCCAAAAAGAAAGGAACAAATACCCAATCTCAAACCCTAGACCACAAAACCTTAACCCCACAACCACCACCATCCACCAATGATGACCCATCTGTTCAGATTCAAAATCTCAAGAACCTCAACAACGTTCTTCTCAAAGAAACCACCAATCACAGAAACCGCATTCAGCTTCTTCTCAAAGCTAACCACGCCGCCATGGATGTTGAAGAGAAAAATCTCGCCTTGGACCTTCAAAACGATGTTTTCTTTGTTTTTGTTCAGACCCAGATCACTGAATTAGGGTTTCGCTTTGAAAAGATCGTTGAAGAGAAAAATGAGATTGAGTATGAGGTTTCTGTTCAAAGGGAGAAGATGAAGGATTTAGGGTTGTGTCTGGAGAGTGAGAAGAGGAATGTTGAGAAGATGAGGTTGGATGCACGGAAACTGTTTGATGAAAAGGCTGAGAAAGAAAGAAGGGTTGAGGAGCTTGAGAAGGACTGGGATTTGGCTGTGAAGAAGTCAATTTTGTCGGTGAAGGTGATTGATGAGTTGAAGGAGAAGATTGATTTGGTGGTGAAGGAGAAGAAAGAGGCTGAGGGTGTGAATAGTACTCAGGAGGTGAAGATTTTCAATCTTGGACTTGAGCTGCAGCAGGTTAATGAGGTTTTGAAGAGCTCGCGGAATGAAGAGGCGGTGATGCGTGGGAAGATTCGTGAAATGGAGGAAACTATTGAGGTTGCTGTGGAGAAGGAAAGGGAAATGATGTTGGAAAATAGTAAATTGGTTGGTGAGAAGAAGGAGATGGAGAAAAGTATTGAGAGTTTGACTGAGGGGAGGGATACTGTTTATAGGACTCTGGATATGGTTAAGAGAGAATTGGAGAATAGGCAGCGTGAGGTTGATGAGGCGAGAAGAGCTAGAGATGAGGTTGAGAAGGTTAAAGTTGGCTATGAGAATGAAGTCGTTAAGTTGCAAGGTGAAATAAGTGTACTGAAGGGTGTTGTAGAGGAGTGGAAAATTGTAGCTAGAGAGTCTGGAGAGAAAAACAATGGATTACTGTCTCAGGTTAATCATTATAGGAATGTTATTGATGAAGTGAAGTCTATGAATGAGCTCAACAGTAAGAAGTTTGATGAGGAGAAAAAGAAAGTGGAGAATTTGCAGTCACAAGTTGTGGAAATGGAGGAAAAAATTGAGCTATTACTCTCTCAAGTTCAATGTTATAAGAATGCTGTTGAGGAAGTGGAGCTTGAGAGGGATAACGTCAGAAAGGGATATGATGAAAAGAAAAACAAAGTGGAGGATTTGGAGGCACATGTTACTGAATTGAAGCTTAAGCAGGATACCATCATGAAAAGATATGACGAGGCAACAAATAAGGTGGAGAATTTGGAGTTGCAAGTTGTGGGACTGAAGGAAAAAATTGAGAATGCTGAAGCTGAGTTGGTCAAGGTGAGTAGCGAGAAAGAGAAGATGAATGAGACAAACAAGGAGCTAGGAAGCCGCATAGATGTTTTGATTAACGAAAAGGATGCTACACATAGTAGCCTCATTGCAGCTCAAAGAGAGTGCAAGGATTTGAGAGCTAAGTTTGAGTCTTCTAGAATCAATTCAAAGCAAACTTTGGAATTGTTGAAGAGCACTGTTGCACATGTGTCTAAGGAAAGTGTGGAAGTGATTCCTCGCGGTGAGAAGAAGCATGTGGAAGAAATTCAGTCTTTTGCTGAAGAACTTGAGGCAATCAAGAAAGCATTCAAAGCTAAGGATGAGCTGGTGGATGATATGAAGAAACAAGTTGTATCACTGCAGAAATCTGCGTCTGATGCACATAAAGGTAAGAACTTGTGGACCGGTTTAACCTCTGCTGCTACTATTTGTGCTTTTGCGTTGACTGCATATGTTGCTAAAGGACGTTGA

Protein sequence

>Msa1442300

MAKKKGTNTQSQTLDHKTLTPQPPPSTNDDPSVQIQNLKNLNNVLLKETTNHRNRIQLLLKANHAAMDVEEKNLALDLQNDVFFVFVQTQITELGFRFEKIVEEKNEIEYEVSVQREKMKDLGLCLESEKRNVEKMRLDARKLFDEKAEKERRVEELEKDWDLAVKKSILSVKVIDELKEKIDLVVKEKKEAEGVNSTQEVKIFNLGLELQQVNEVLKSSRNEEAVMRGKIREMEETIEVAVEKEREMMLENSKLVGEKKEMEKSIESLTEGRDTVYRTLDMVKRELENRQREVDEARRARDEVEKVKVGYENEVVKLQGEISVLKGVVEEWKIVARESGEKNNGLLSQVNHYRNVIDEVKSMNELNSKKFDEEKKKVENLQSQVVEMEEKIELLLSQVQCYKNAVEEVELERDNVRKGYDEKKNKVEDLEAHVTELKLKQDTIMKRYDEATNKVENLELQVVGLKEKIENAEAELVKVSSEKEKMNETNKELGSRIDVLINEKDATHSSLIAAQRECKDLRAKFESSRINSKQTLELLKSTVAHVSKESVEVIPRGEKKHVEEIQSFAEELEAIKKAFKAKDELVDDMKKQVVSLQKSASDAHKGKNLWTGLTSAATICAFALTAYVAKGR*