AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0118900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0118900 MtrunA17_Chr1g0176391 97.536 487 11 1 1 487 1 486 0.0 997
Msa0118900 MtrunA17_Chr7g0268041 61.157 484 160 9 14 487 16 481 0.0 550
Msa0118900 MtrunA17_Chr2g0307041 52.525 99 47 0 68 166 21 119 1.22e-22 99.8
Msa0118900 MtrunA17_Chr1g0184441 46.789 109 56 1 57 163 522 630 1.20e-19 92.4
Msa0118900 MtrunA17_Chr4g0073651 45.283 106 58 0 61 166 4 109 1.84e-17 84.7
Msa0118900 MtrunA17_Chr4g0049631 36.364 121 74 1 42 162 282 399 8.50e-14 73.6
Msa0118900 MtrunA17_Chr5g0434681 46.053 76 41 0 66 141 620 695 1.87e-12 70.1
Msa0118900 MtrunA17_Chr3g0093241 35.099 151 84 3 42 180 310 458 2.56e-12 68.9
Msa0118900 MtrunA17_Chr8g0376151 44.737 76 42 0 66 141 600 675 5.70e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0118900 AT5G06560.1 52.863 524 202 14 1 485 1 518 4.15e-167 482
Msa0118900 AT3G11850.2 44.196 491 229 12 32 485 22 504 7.06e-123 369
Msa0118900 AT3G11850.1 44.196 491 229 12 32 485 22 504 7.06e-123 369
Msa0118900 AT3G54740.3 41.051 514 198 13 1 485 1 438 8.92e-106 322
Msa0118900 AT3G54740.6 41.051 514 198 13 1 485 1 438 8.92e-106 322
Msa0118900 AT3G54740.2 41.051 514 198 13 1 485 1 438 8.92e-106 322
Msa0118900 AT3G54740.5 41.051 514 198 13 1 485 1 438 8.92e-106 322
Msa0118900 AT3G54740.8 41.372 452 168 12 55 485 15 390 2.06e-95 294
Msa0118900 AT3G54740.1 41.372 452 168 12 55 485 15 390 2.06e-95 294
Msa0118900 AT3G54740.7 41.372 452 168 12 55 485 15 390 2.06e-95 294
Msa0118900 AT3G54740.4 41.372 452 168 12 55 485 15 390 2.06e-95 294
Msa0118900 AT2G24140.2 48.913 92 47 0 77 168 30 121 6.48e-20 90.9
Msa0118900 AT2G24140.3 48.913 92 47 0 77 168 30 121 6.48e-20 90.9
Msa0118900 AT4G30830.1 47.826 92 48 0 76 167 28 119 8.14e-20 91.3
Msa0118900 AT4G30830.2 47.826 92 48 0 76 167 28 119 8.14e-20 91.3
Msa0118900 AT5G16720.1 40.833 120 71 0 46 165 340 459 1.45e-18 89.4
Msa0118900 AT5G57830.1 47.321 112 59 0 66 177 19 130 9.09e-18 85.5
Msa0118900 AT2G30690.1 42.308 104 58 1 58 159 606 709 6.59e-17 84.3
Msa0118900 AT2G30690.2 42.308 104 58 1 58 159 606 709 6.59e-17 84.3
Msa0118900 AT1G08800.2 41.121 107 63 0 53 159 880 986 1.50e-15 80.1
Msa0118900 AT1G08800.4 41.121 107 63 0 53 159 880 986 1.50e-15 80.1
Msa0118900 AT1G08800.3 41.121 107 63 0 53 159 880 986 1.50e-15 80.1
Msa0118900 AT1G08800.1 41.121 107 63 0 53 159 880 986 1.50e-15 80.1
Msa0118900 AT1G74830.1 41.739 115 64 1 59 173 301 412 1.43e-14 76.6
Msa0118900 AT1G70750.1 43.011 93 53 0 73 165 423 515 8.90e-14 74.3
Msa0118900 AT2G24140.4 48.571 70 36 0 99 168 1 70 2.46e-13 70.9
Msa0118900 AT2G24140.1 48.571 70 36 0 99 168 1 70 2.46e-13 70.9
Msa0118900 AT4G13630.2 42.453 106 60 1 59 163 217 322 4.99e-12 68.6
Msa0118900 AT4G13630.1 42.453 106 60 1 59 163 217 322 4.99e-12 68.6
Msa0118900 AT1G18990.1 38.621 145 80 3 19 161 262 399 1.10e-11 67.4
Msa0118900 AT1G04890.1 41.346 104 47 1 71 160 105 208 1.19e-11 67.0

Find 151 sgRNAs with CRISPR-Local

Find 405 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTATACTTGTTATTGTTCT+TGG 0.136537 1_3:-42180156 None:intergenic
ATATCTTTCTTGCTGGAAAA+AGG 0.163045 1_3:+42183591 Msa0118900:three_prime_UTR
CTCGCGTGGCTTGTCAAATT+TGG 0.173314 1_3:-42180059 None:intergenic
ACAATTGACTCTGTTCATTC+TGG 0.200824 1_3:+42180269 Msa0118900:CDS
GAAGCACGATGAGTTTAAAT+TGG 0.276035 1_3:+42179404 Msa0118900:CDS
AATAAGAAGCTTCTTAGAAT+TGG 0.288787 1_3:-42178722 None:intergenic
AAACACAGGATGATGAGTTT+TGG 0.300857 1_3:+42179765 Msa0118900:CDS
GCACCGGATAATGGCTTTAC+AGG 0.308345 1_3:+42180293 Msa0118900:CDS
CTCCGACGGCGTCTCCTTCA+AGG 0.309585 1_3:+42178867 Msa0118900:five_prime_UTR
CCTCCCCATATCTTTCTTGC+TGG 0.309677 1_3:+42183584 Msa0118900:three_prime_UTR
TCAGGAGGAACTTATGTCTT+TGG 0.312375 1_3:+42179680 Msa0118900:CDS
TGATGATTCCCTGATTCCTT+TGG 0.314429 1_3:-42180353 None:intergenic
TTATACTTGTTATTGTTCTT+GGG 0.322493 1_3:-42180155 None:intergenic
CAGCCGGCGGCGAAGGTCGC+CGG 0.330373 1_3:-42178835 None:intergenic
TGTGTGATTTGTTGATTTGC+TGG 0.334374 1_3:+42179097 Msa0118900:five_prime_UTR
GTCGCTTACGTGTGAAGTTC+AGG 0.334893 1_3:+42179737 Msa0118900:CDS
GGAAAACGGGAATCAATTTC+CGG 0.342306 1_3:-42178809 None:intergenic
AAATGTAATGTCATGTATAA+TGG 0.343360 1_3:+42179855 Msa0118900:CDS
CATTCTGGGGCACCGGATAA+TGG 0.354097 1_3:+42180284 Msa0118900:CDS
TTAAGGTCACTTACTTGCTT+TGG 0.364399 1_3:-42181155 None:intergenic
TATGCAGCAGAGAACGATTC+AGG 0.369549 1_3:+42179503 Msa0118900:CDS
GAAGCTTTACATGAGGCTTC+AGG 0.375689 1_3:+42180403 Msa0118900:CDS
TCCTCTGACTCAGCAACGTT+CGG 0.376250 1_3:+42180089 Msa0118900:CDS
GCAACCAGTCCAAAGGAATC+AGG 0.378139 1_3:+42180344 Msa0118900:CDS
AAGCTCCTCAAACGGTCATT+AGG 0.378165 1_3:-42179933 None:intergenic
AAGGTGGGTGGCGTGAAGGT+AGG 0.381615 1_3:+42179122 Msa0118900:five_prime_UTR
GACTGCTGTAGGTATATGTT+TGG 0.384215 1_3:+42183384 Msa0118900:intron
TGGGCTACCAGCTGACAGTA+TGG 0.389528 1_3:+42183404 Msa0118900:CDS
GACAAGTACCGAGATCTTGC+AGG 0.390060 1_3:-42180566 None:intergenic
GTTTGAGGAGCTTGGAGAAT+AGG 0.397127 1_3:+42179943 Msa0118900:CDS
TTCAGGCACTTGAGGCTGAT+AGG 0.398288 1_3:+42180420 Msa0118900:CDS
CATGTAAAGCTTCTTAATGT+AGG 0.398593 1_3:-42180393 None:intergenic
ATCATCGAAAACTCCAGCTT+TGG 0.399638 1_3:-42180318 None:intergenic
TTCAAATTCGAATTGTCCTC+TGG 0.399754 1_3:-42180197 None:intergenic
GAAGGAGCGGGAATGGTGTT+TGG 0.403473 1_3:-42178539 None:intergenic
GGCTTTACAGGTTCCAAAGC+TGG 0.408092 1_3:+42180305 Msa0118900:CDS
GGTGGGATGTGTAAAGAAAT+AGG 0.411105 1_3:+42180110 Msa0118900:CDS
CAATTGACTCTGTTCATTCT+GGG 0.412467 1_3:+42180270 Msa0118900:CDS
AGGTGGGTGGCGTGAAGGTA+GGG 0.418557 1_3:+42179123 Msa0118900:five_prime_UTR
ACCTGTGTCGTCGGTTGCGC+GGG 0.422138 1_3:+42179437 Msa0118900:CDS
TGAAATTGAAAGTAATTTGT+TGG 0.422705 1_3:+42183648 Msa0118900:three_prime_UTR
GGAGAATAGGATTTCTCAAA+TGG 0.426445 1_3:+42179956 Msa0118900:CDS
GATATGAGCATTCTCTCATA+TGG 0.430882 1_3:+42183701 Msa0118900:three_prime_UTR
TGGAAAATTACTAACCTTGA+AGG 0.433519 1_3:-42178881 None:intergenic
TAATGACCGTTTGAGGAGCT+TGG 0.436236 1_3:+42179935 Msa0118900:CDS
TGTTGATTTGCTGGAGAAGG+TGG 0.438814 1_3:+42179106 Msa0118900:five_prime_UTR
GGTGGGTGGCGTGAAGGTAG+GGG 0.440122 1_3:+42179124 Msa0118900:five_prime_UTR
GGATTTGAATGAGGAGTTGG+AGG 0.445102 1_3:+42179524 Msa0118900:CDS
ACAATACCCTTAGTTGAGTC+AGG 0.445558 1_3:-42183792 None:intergenic
ATTCCCTGATTCCTTTGGAC+TGG 0.453675 1_3:-42180348 None:intergenic
TTCTCAACCTGACTCAACTA+AGG 0.453981 1_3:+42183785 Msa0118900:three_prime_UTR
CTCTGTTCATTCTGGGGCAC+CGG 0.453986 1_3:+42180277 Msa0118900:CDS
GGAGAAAATGACGCATGATC+AGG 0.455281 1_3:+42179662 Msa0118900:CDS
ACAACGGCAGCCGGCGGCGA+AGG 0.457255 1_3:-42178842 None:intergenic
AGGTCGCCGGAGCGGAAAAC+GGG 0.458609 1_3:-42178822 None:intergenic
AAGGTCGCCGGAGCGGAAAA+CGG 0.461243 1_3:-42178823 None:intergenic
TTGTTGAAATGTTGTGATTG+TGG 0.462676 1_3:+42179324 Msa0118900:CDS
TCAGGATTTGAATGAGGAGT+TGG 0.463110 1_3:+42179521 Msa0118900:CDS
TTTGAGGTTGCAGAGGGAAA+AGG 0.465476 1_3:+42179596 Msa0118900:CDS
AGTTGAGTCAGGTTGAGAAT+AGG 0.468852 1_3:-42183781 None:intergenic
TTTGAATGAGGAGTTGGAGG+AGG 0.470668 1_3:+42179527 Msa0118900:CDS
GATATTGAGAAATATGCATT+TGG 0.470801 1_3:+42179903 Msa0118900:CDS
TTGTGGATGTAGTTGTTCCT+TGG 0.472863 1_3:+42179341 Msa0118900:CDS
TGCTTCCACAGCTGCGAATG+AGG 0.477326 1_3:+42179560 Msa0118900:CDS
ATGGTGTTTGGTGGGAACAA+TGG 0.477536 1_3:-42178527 None:intergenic
TTGTTGAAAATTGAAGCTAT+TGG 0.482132 1_3:+42179223 Msa0118900:five_prime_UTR
GTTACGGAGAAAGTAATTGT+TGG 0.483998 1_3:+42180029 Msa0118900:CDS
TTTAAAGGAGGGTATTCGTA+TGG 0.487165 1_3:-42179834 None:intergenic
GGAAAAGGCGGAAGTTCAAA+TGG 0.490761 1_3:+42179611 Msa0118900:CDS
TGGATGTAGTTGTTCCTTGG+TGG 0.490768 1_3:+42179344 Msa0118900:CDS
GAACCTGTAAAGCCATTATC+CGG 0.491366 1_3:-42180296 None:intergenic
ACCATCCACCTGGCTGTAAG+TGG 0.503511 1_3:-42179988 None:intergenic
ATTTGTTGATTTGCTGGAGA+AGG 0.504378 1_3:+42179103 Msa0118900:five_prime_UTR
TCAGGCACTTGAGGCTGATA+GGG 0.504864 1_3:+42180421 Msa0118900:CDS
GTCGGAGAAACAACGGCAGC+CGG 0.505182 1_3:-42178851 None:intergenic
TTGTTCTTGGGAGACTCTGT+AGG 0.505523 1_3:-42180143 None:intergenic
CATGAGGCTTCAGGCACTTG+AGG 0.506019 1_3:+42180412 Msa0118900:CDS
TACCTGTGTCGTCGGTTGCG+CGG 0.506467 1_3:+42179436 Msa0118900:CDS
GGCTGCCGTTGTTTCTCCGA+CGG 0.507063 1_3:+42178853 Msa0118900:five_prime_UTR
GGGCTACCAGCTGACAGTAT+GGG 0.507736 1_3:+42183405 Msa0118900:CDS
ACTGCTGTAGGTATATGTTT+GGG 0.508143 1_3:+42183385 Msa0118900:intron
TCACTTCTGCACTGAAGTTG+TGG 0.511391 1_3:-42183865 None:intergenic
GGACAATTCGAATTTGAAGA+AGG 0.513060 1_3:+42180202 Msa0118900:CDS
GGAGCGGGAATGGTGTTTGG+TGG 0.520071 1_3:-42178536 None:intergenic
AGTTGTGGAAGTTAAAGTTA+TGG 0.527722 1_3:-42183850 None:intergenic
TCTGACTCAGCAACGTTCGG+TGG 0.530457 1_3:+42180092 Msa0118900:CDS
TGTTCTTGGGAGACTCTGTA+GGG 0.530579 1_3:-42180142 None:intergenic
GTTGATTTGCTGGAGAAGGT+GGG 0.531139 1_3:+42179107 Msa0118900:five_prime_UTR
GAACAATAACAAGTATAAGA+AGG 0.531882 1_3:+42180160 Msa0118900:CDS
ATGTAAAGCTTCTTAATGTA+GGG 0.531958 1_3:-42180392 None:intergenic
AAGAATGAATGAATGAATGA+AGG 0.532019 1_3:-42178557 None:intergenic
ATCACCTTCGACCTCATCCT+CGG 0.533257 1_3:-42179793 None:intergenic
AACGATTCAGGATTTGAATG+AGG 0.533822 1_3:+42179515 Msa0118900:CDS
AAACTCCTAATGACCGTTTG+AGG 0.535504 1_3:+42179928 Msa0118900:CDS
GCTCCGGCGACCTTCGCCGC+CGG 0.536269 1_3:+42178832 Msa0118900:five_prime_UTR
CATTGCCTCATTCGCAGCTG+TGG 0.537747 1_3:-42179565 None:intergenic
TTCAACAAATCCCTCGGAGA+TGG 0.542740 1_3:-42179309 None:intergenic
GAGCGGGAATGGTGTTTGGT+GGG 0.542857 1_3:-42178535 None:intergenic
GAATGAATGAATGAAGGAGC+GGG 0.543363 1_3:-42178551 None:intergenic
CAACCAGTCCAAAGGAATCA+GGG 0.548648 1_3:+42180345 Msa0118900:CDS
AAAGGAGGGTATTCGTATGG+AGG 0.549905 1_3:-42179831 None:intergenic
TGATAGGGAATCAATGAGGC+AGG 0.551938 1_3:+42180436 Msa0118900:CDS
CGAGCAAGCCTGCAAGATCT+CGG 0.551994 1_3:+42180558 Msa0118900:CDS
AGCAAGCCCATACTGTCAGC+TGG 0.553778 1_3:-42183411 None:intergenic
AATGAATGAAGGAGCGGGAA+TGG 0.556590 1_3:-42178546 None:intergenic
GGGAGACTCTGTAGGGAACT+CGG 0.562340 1_3:-42180135 None:intergenic
TGAGCATTCTCTCATATGGT+TGG 0.563064 1_3:+42183705 Msa0118900:three_prime_UTR
TATTCTCCAAGCTCCTCAAA+CGG 0.563369 1_3:-42179941 None:intergenic
TAGTGTTACTAAAATTCAGT+TGG 0.568936 1_3:-42183529 None:intergenic
GGAGAAGGTGGGTGGCGTGA+AGG 0.579153 1_3:+42179118 Msa0118900:five_prime_UTR
ACCGAACGTTGCTGAGTCAG+AGG 0.583019 1_3:-42180090 None:intergenic
CCCACTTACAGCCAGGTGGA+TGG 0.583532 1_3:+42179987 Msa0118900:CDS
CTGACTCAGCAACGTTCGGT+GGG 0.585081 1_3:+42180093 Msa0118900:CDS
ATGTGTTGTGTTACGTGAGA+TGG 0.587855 1_3:+42179476 Msa0118900:CDS
CAATAAAATCACCATCCACC+TGG 0.588402 1_3:-42179998 None:intergenic
GAAAACTCCCACTTACAGCC+AGG 0.590810 1_3:+42179980 Msa0118900:CDS
GGCGGCGAAGGTCGCCGGAG+CGG 0.593170 1_3:-42178830 None:intergenic
GGAGAAACAACGGCAGCCGG+CGG 0.596635 1_3:-42178848 None:intergenic
AAGGTAGATAATGCTTCAGA+AGG 0.602096 1_3:+42180221 Msa0118900:CDS
AGCACAGGTTGTGTTACTGA+AGG 0.606214 1_3:+42180484 Msa0118900:CDS
AATGAGCACAGATAAAGCAC+AGG 0.607100 1_3:+42180469 Msa0118900:CDS
ATGTATTTCAAGTACACAAG+TGG 0.608743 1_3:+42183473 Msa0118900:CDS
GTGAAGGTAGGGGAAGAGAA+TGG 0.609607 1_3:+42179134 Msa0118900:five_prime_UTR
CAACATTTCAACAAATCCCT+CGG 0.610770 1_3:-42179315 None:intergenic
AATTGACTCTGTTCATTCTG+GGG 0.616386 1_3:+42180271 Msa0118900:CDS
CCAGCAAGAAAGATATGGGG+AGG 0.616766 1_3:-42183584 None:intergenic
TCTCAACCTGACTCAACTAA+GGG 0.616933 1_3:+42183786 Msa0118900:three_prime_UTR
TAATGTCATGTATAATGGCA+TGG 0.619732 1_3:+42179860 Msa0118900:CDS
ACATTAAGAAGCTTTACATG+AGG 0.620076 1_3:+42180396 Msa0118900:CDS
TGATTATGCAACCAGTCCAA+AGG 0.622802 1_3:+42180337 Msa0118900:CDS
TTCAGAACATTGTTCCACCA+AGG 0.625495 1_3:-42179358 None:intergenic
AATGGATGCGATCTGTTAAG+CGG 0.631622 1_3:+42179382 Msa0118900:CDS
AACCTTGAAGGAGACGCCGT+CGG 0.631800 1_3:-42178869 None:intergenic
ACCCGCGCAACCGACGACAC+AGG 0.633336 1_3:-42179438 None:intergenic
GAAAATGACGCATGATCAGG+AGG 0.634038 1_3:+42179665 Msa0118900:CDS
CCATCCACCTGGCTGTAAGT+GGG 0.639457 1_3:-42179987 None:intergenic
TTGACAAAAGAACAAATGCA+AGG 0.639746 1_3:+42183442 Msa0118900:CDS
TAGTGAATTACCTGTGTCGT+CGG 0.646306 1_3:+42179428 Msa0118900:CDS
TGTATTTCAAGTACACAAGT+GGG 0.647014 1_3:+42183474 Msa0118900:CDS
TGAATGAATGAATGAAGGAG+CGG 0.648063 1_3:-42178552 None:intergenic
GAGGTTGCAGAGGGAAAAGG+CGG 0.649166 1_3:+42179599 Msa0118900:CDS
TAGGGGAAGAGAATGGTCGA+TGG 0.651844 1_3:+42179141 Msa0118900:five_prime_UTR
TTTCCAGCAAGAAAGATATG+GGG 0.653128 1_3:-42183587 None:intergenic
AGACGCCGTCGGAGAAACAA+CGG 0.655933 1_3:-42178858 None:intergenic
AAGTTCAGGCTTATAAACAC+AGG 0.657321 1_3:+42179751 Msa0118900:CDS
GGATTATTTCTCTCAACCAG+AGG 0.660219 1_3:+42180181 Msa0118900:CDS
GATTTGCTGGAGAAGGTGGG+TGG 0.665421 1_3:+42179110 Msa0118900:five_prime_UTR
TACACCGAGGATGAGGTCGA+AGG 0.669244 1_3:+42179789 Msa0118900:CDS
AACTCCCACTTACAGCCAGG+TGG 0.685414 1_3:+42179983 Msa0118900:CDS
GTACTTGAAATACATCTCTG+TGG 0.712587 1_3:-42183465 None:intergenic
AGGCTGATAGGGAATCAATG+AGG 0.730909 1_3:+42180432 Msa0118900:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGATTTAGTTTTTTTTTTTT+TGG - chr1_3:42178381-42178400 None:intergenic 10.0%
!!! GATTTTTAATTTTTTTTCTT+GGG - chr1_3:42178439-42178458 None:intergenic 10.0%
!!! TGATTTTTAATTTTTTTTCT+TGG - chr1_3:42178440-42178459 None:intergenic 10.0%
!! AATTTACCAAATAAAAAAAA+TGG - chr1_3:42178767-42178786 None:intergenic 10.0%
!!! AAAAAATCGATTTTTATTAT+TGG + chr1_3:42178973-42178992 Msa0118900:intron 10.0%
!!! AAAAATCGATTTTTATTATT+GGG + chr1_3:42178974-42178993 Msa0118900:intron 10.0%
!!! TTGTTAATTTTTTTGTTATT+TGG + chr1_3:42179029-42179048 Msa0118900:intron 10.0%
!!! TATATTTTTTTTTTGTTTAG+TGG + chr1_3:42181097-42181116 Msa0118900:intron 10.0%
!! AATAAATTAAAAAGAATACA+AGG - chr1_3:42183906-42183925 None:intergenic 10.0%
!!! CTTTTTCCATTTTTTTTATT+TGG + chr1_3:42178758-42178777 Msa0118900:five_prime_UTR 15.0%
!!! AAAATCGATTTTTATTATTG+GGG + chr1_3:42178975-42178994 Msa0118900:intron 15.0%
!!! GTTTTTTTGTTTTTGTTTTT+AGG + chr1_3:42179064-42179083 Msa0118900:intron 15.0%
!!! TTTTATTGGAAAAAATGTTA+CGG + chr1_3:42180013-42180032 Msa0118900:CDS 15.0%
!!! AAATGTATTTTTTTTCATCA+GGG - chr1_3:42181039-42181058 None:intergenic 15.0%
!! ATGAAAAAAAATACATTTCA+TGG + chr1_3:42181041-42181060 Msa0118900:intron 15.0%
!!! ATTTTATAGGGTATTTTATA+GGG - chr1_3:42182093-42182112 None:intergenic 15.0%
!!! AATTTTATAGGGTATTTTAT+AGG - chr1_3:42182094-42182113 None:intergenic 15.0%
!!! ACTTTGGTAATAATTTTATA+GGG - chr1_3:42182105-42182124 None:intergenic 15.0%
!!! AACTTTGGTAATAATTTTAT+AGG - chr1_3:42182106-42182125 None:intergenic 15.0%
!! TATATATAAATTTGTGAAAC+TGG - chr1_3:42182269-42182288 None:intergenic 15.0%
!! AATTTATATATACATGCATA+TGG + chr1_3:42182277-42182296 Msa0118900:intron 15.0%
!!! AATTTTGTTCGTTGAAATTT+TGG + chr1_3:42178909-42178928 Msa0118900:intron 20.0%
!!! GTTGAAATTTTGGTTAAATT+TGG + chr1_3:42178919-42178938 Msa0118900:intron 20.0%
!!! TACATGACATTACATTTTAA+AGG - chr1_3:42179852-42179871 None:intergenic 20.0%
!! AAATGTAATGTCATGTATAA+TGG + chr1_3:42179855-42179874 Msa0118900:CDS 20.0%
!!! TTATACTTGTTATTGTTCTT+GGG - chr1_3:42180158-42180177 None:intergenic 20.0%
!! TTTCAACTAATGATTTATTG+CGG + chr1_3:42180671-42180690 Msa0118900:intron 20.0%
!!! GAAATGTATTTTTTTTCATC+AGG - chr1_3:42181040-42181059 None:intergenic 20.0%
!! TTGAAATAACTTATAACCAT+AGG - chr1_3:42181464-42181483 None:intergenic 20.0%
!!! GTTATAAGTTATTTCAAAGA+AGG + chr1_3:42181467-42181486 Msa0118900:intron 20.0%
!!! TACTGTACTTTTTGTTTTTT+TGG + chr1_3:42181919-42181938 Msa0118900:intron 20.0%
!!! TATGTAGGTTATAGAATTTT+GGG - chr1_3:42182360-42182379 None:intergenic 20.0%
!!! TTATGTAGGTTATAGAATTT+TGG - chr1_3:42182361-42182380 None:intergenic 20.0%
!!! ATGATTACATTTTGATGTTT+TGG - chr1_3:42182470-42182489 None:intergenic 20.0%
!! ATAGTTATCCACTAATATAT+AGG + chr1_3:42182629-42182648 Msa0118900:intron 20.0%
!!! ACTTCGGTAATAATTTTATA+GGG - chr1_3:42183027-42183046 None:intergenic 20.0%
!!! AACTTCGGTAATAATTTTAT+AGG - chr1_3:42183028-42183047 None:intergenic 20.0%
!!! TCTATTGATTGAAATTCAAA+TGG + chr1_3:42183137-42183156 Msa0118900:intron 20.0%
!!! TGAAATTGAAAGTAATTTGT+TGG + chr1_3:42183648-42183667 Msa0118900:three_prime_UTR 20.0%
! AAGAATGAATGAATGAATGA+AGG - chr1_3:42178560-42178579 None:intergenic 25.0%
! AATAAGAAGCTTCTTAGAAT+TGG - chr1_3:42178725-42178744 None:intergenic 25.0%
!! TGGTTAAATTTGGTGAAATT+AGG + chr1_3:42178929-42178948 Msa0118900:intron 25.0%
!! GGTGAAATTAGGTTAATTTT+AGG + chr1_3:42178940-42178959 Msa0118900:intron 25.0%
!! GATTTTTATTATTGGGGTTT+AGG + chr1_3:42178981-42179000 Msa0118900:intron 25.0%
!! TTTTCAACAAATGACAAATC+AGG - chr1_3:42179213-42179232 None:intergenic 25.0%
! TTGTTGAAAATTGAAGCTAT+TGG + chr1_3:42179223-42179242 Msa0118900:five_prime_UTR 25.0%
!!! AAGCTATTGGTTGTAATTTT+TGG + chr1_3:42179236-42179255 Msa0118900:five_prime_UTR 25.0%
!!! TGACATTACATTTTAAAGGA+GGG - chr1_3:42179848-42179867 None:intergenic 25.0%
!!! ATGACATTACATTTTAAAGG+AGG - chr1_3:42179849-42179868 None:intergenic 25.0%
! GATATTGAGAAATATGCATT+TGG + chr1_3:42179903-42179922 Msa0118900:CDS 25.0%
!!! CTTATACTTGTTATTGTTCT+TGG - chr1_3:42180159-42180178 None:intergenic 25.0%
! GAACAATAACAAGTATAAGA+AGG + chr1_3:42180160-42180179 Msa0118900:CDS 25.0%
! ATGTAAAGCTTCTTAATGTA+GGG - chr1_3:42180395-42180414 None:intergenic 25.0%
! AAAAGCAAACAATGATGAAA+TGG - chr1_3:42180654-42180673 None:intergenic 25.0%
! TTAAGGCATGTTTGAAAAAT+TGG - chr1_3:42180734-42180753 None:intergenic 25.0%
!!! TTTTTCAAACATGCCTTAAT+TGG + chr1_3:42180735-42180754 Msa0118900:intron 25.0%
!! CAAAATTTAGCTTCCAATTA+AGG - chr1_3:42180751-42180770 None:intergenic 25.0%
! TTATTATAGACATTTGCCTT+TGG + chr1_3:42180892-42180911 Msa0118900:intron 25.0%
!! TTCTCAATAAAAGGACTTTT+GGG - chr1_3:42181418-42181437 None:intergenic 25.0%
! AACTTTCAAAGATAAAGACA+TGG - chr1_3:42181526-42181545 None:intergenic 25.0%
! GGAAACTAACATATATAGAA+GGG - chr1_3:42181684-42181703 None:intergenic 25.0%
! AGGAAACTAACATATATAGA+AGG - chr1_3:42181685-42181704 None:intergenic 25.0%
!!! TTGTTTTTTTGGAACTTCTT+TGG + chr1_3:42181930-42181949 Msa0118900:intron 25.0%
! AATTAATAACAACATCACAG+TGG - chr1_3:42182028-42182047 None:intergenic 25.0%
!! TTGTTATTAATTATGCTTCC+TGG + chr1_3:42182036-42182055 Msa0118900:intron 25.0%
! TATAAATTTGTGAAACTGGT+AGG - chr1_3:42182265-42182284 None:intergenic 25.0%
!! ACCTACATAAACTCAAATTT+TGG + chr1_3:42182371-42182390 Msa0118900:intron 25.0%
!! TCCAAAATTTGAGTTTATGT+AGG - chr1_3:42182375-42182394 None:intergenic 25.0%
!!! ATGTTTTGGATTTTCTTATG+GGG - chr1_3:42182456-42182475 None:intergenic 25.0%
!!! GATGTTTTGGATTTTCTTAT+GGG - chr1_3:42182457-42182476 None:intergenic 25.0%
!!! TGATGTTTTGGATTTTCTTA+TGG - chr1_3:42182458-42182477 None:intergenic 25.0%
! AGTTCGTACACATAAAAAAT+TGG + chr1_3:42182606-42182625 Msa0118900:intron 25.0%
! CAACTAATCCTATATATTAG+TGG - chr1_3:42182640-42182659 None:intergenic 25.0%
!!! TATGCTATCATGTTTTTTAG+AGG + chr1_3:42182148-42182167 Msa0118900:intron 25.0%
!! TCGATTTTCAAAAATAGTGA+GGG - chr1_3:42183168-42183187 None:intergenic 25.0%
!!! ATCGATTTTCAAAAATAGTG+AGG - chr1_3:42183169-42183188 None:intergenic 25.0%
! ACTATTCTATAGTTGGAAAT+TGG - chr1_3:42183219-42183238 None:intergenic 25.0%
! TGTCAAGCATTATCATTATT+CGG - chr1_3:42183305-42183324 None:intergenic 25.0%
!! AATTCGCAGTTTTCAAATTT+CGG + chr1_3:42183502-42183521 Msa0118900:exon 25.0%
!! TAGTGTTACTAAAATTCAGT+TGG - chr1_3:42183532-42183551 None:intergenic 25.0%
!! TTTTGTACATAACATATTGC+TGG + chr1_3:42183733-42183752 Msa0118900:three_prime_UTR 25.0%
!!! TTCTTGGGAAGAGTTTTTTT+TGG - chr1_3:42178424-42178443 None:intergenic 30.0%
GGAACAATGGAAAAAATTGA+AGG - chr1_3:42178517-42178536 None:intergenic 30.0%
! NNCGTGAATTTCACACTTTT+CGG + chr1_3:42178692-42178711 Msa0118900:intron 30.0%
! TCATTTTCTGAACTTTGTAC+CGG + chr1_3:42178790-42178809 Msa0118900:five_prime_UTR 30.0%
TGGAAAATTACTAACCTTGA+AGG - chr1_3:42178884-42178903 None:intergenic 30.0%
TCAACGAACAAAATTCGAAA+TGG - chr1_3:42178904-42178923 None:intergenic 30.0%
!! GGTTGTAATTTTTGGATTGT+TGG + chr1_3:42179244-42179263 Msa0118900:five_prime_UTR 30.0%
!! GTAATTTTTGGATTGTTGGA+AGG + chr1_3:42179248-42179267 Msa0118900:five_prime_UTR 30.0%
TTGTTGAAATGTTGTGATTG+TGG + chr1_3:42179324-42179343 Msa0118900:CDS 30.0%
!! TGGAACAATGTTCTGAAAAA+TGG + chr1_3:42179364-42179383 Msa0118900:CDS 30.0%
TAATGTCATGTATAATGGCA+TGG + chr1_3:42179860-42179879 Msa0118900:CDS 30.0%
CATGTAAAGCTTCTTAATGT+AGG - chr1_3:42180396-42180415 None:intergenic 30.0%
ACATTAAGAAGCTTTACATG+AGG + chr1_3:42180396-42180415 Msa0118900:CDS 30.0%
! TCGGTACTTGTCAATTTTTA+AGG + chr1_3:42180577-42180596 Msa0118900:CDS 30.0%
CTAGATAACGTTTACATACA+GGG - chr1_3:42180871-42180890 None:intergenic 30.0%
!!! ATCAGAGTATTTTTTGTGAG+GGG - chr1_3:42180931-42180950 None:intergenic 30.0%
!!! GATCAGAGTATTTTTTGTGA+GGG - chr1_3:42180932-42180951 None:intergenic 30.0%
!!! AGATCAGAGTATTTTTTGTG+AGG - chr1_3:42180933-42180952 None:intergenic 30.0%
! TTTCATGGTAGATTTTGCAA+TGG + chr1_3:42181056-42181075 Msa0118900:intron 30.0%
!!! GGATCACATCAATTGTTTTT+TGG + chr1_3:42181118-42181137 Msa0118900:CDS 30.0%
AGTAGTCAGGAAAAATGTTA+AGG - chr1_3:42181175-42181194 None:intergenic 30.0%
ATTGTTACATGTGTTATCGA+TGG + chr1_3:42181228-42181247 Msa0118900:intron 30.0%
TATTTCAAACTCACATCACT+AGG - chr1_3:42181370-42181389 None:intergenic 30.0%
! CTTCTCAATAAAAGGACTTT+TGG - chr1_3:42181419-42181438 None:intergenic 30.0%
! CAAAAGTCCTTTTATTGAGA+AGG + chr1_3:42181417-42181436 Msa0118900:intron 30.0%
AGAACTACCTTCTCAATAAA+AGG - chr1_3:42181427-42181446 None:intergenic 30.0%
TATGAAGTTTCAATGACAAC+TGG - chr1_3:42181551-42181570 None:intergenic 30.0%
!!! TTTGGTTTTCAAAGTGCATA+TGG + chr1_3:42181580-42181599 Msa0118900:intron 30.0%
!! TTGGTTTTCAAAGTGCATAT+GGG + chr1_3:42181581-42181600 Msa0118900:intron 30.0%
GGAAAACACTTCTTAATTGT+TGG + chr1_3:42181602-42181621 Msa0118900:intron 30.0%
ATTCTCCTTCGTATCAATTT+CGG + chr1_3:42181782-42181801 Msa0118900:intron 30.0%
ACATTTAGTGTGTTAGTCAT+CGG + chr1_3:42181861-42181880 Msa0118900:intron 30.0%
!! CTTTGGTAGTTTTTGAAAGT+TGG + chr1_3:42181947-42181966 Msa0118900:intron 30.0%
TTGATGGAACTGTATCAATA+TGG - chr1_3:42181978-42181997 None:intergenic 30.0%
!!! CATCTGTTTTGTTTTAAACC+AGG - chr1_3:42182057-42182076 None:intergenic 30.0%
! TTTTATAGGGTAGTTTCACA+GGG - chr1_3:42182080-42182099 None:intergenic 30.0%
! ATTTTATAGGGTAGTTTCAC+AGG - chr1_3:42182081-42182100 None:intergenic 30.0%
!!! GCTATCATGTTTTTTAGACT+AGG + chr1_3:42182151-42182170 Msa0118900:intron 30.0%
TGCATATAAATCGACACAAT+TGG + chr1_3:42182311-42182330 Msa0118900:intron 30.0%
GCATATAAATCGACACAATT+GGG + chr1_3:42182312-42182331 Msa0118900:intron 30.0%
!!! GTTCATTAAAGGCATCTTTT+GGG - chr1_3:42182728-42182747 None:intergenic 30.0%
!!! AGTTCATTAAAGGCATCTTT+TGG - chr1_3:42182729-42182748 None:intergenic 30.0%
AAAAGATGCCTTTAATGAAC+TGG + chr1_3:42182728-42182747 Msa0118900:intron 30.0%
AAAGATGCCTTTAATGAACT+GGG + chr1_3:42182729-42182748 Msa0118900:intron 30.0%
! TTTCTCAGATATGTTTTCGT+GGG - chr1_3:42182767-42182786 None:intergenic 30.0%
AATCTGCCAATTCTGTTATT+GGG - chr1_3:42182790-42182809 None:intergenic 30.0%
!! GTATGAATCGTATGGTTTTA+CGG - chr1_3:42182911-42182930 None:intergenic 30.0%
CTATTTAAGTATTATGCCCA+TGG - chr1_3:42182933-42182952 None:intergenic 30.0%
!!! CATCTGTTTTGTTTTAAACC+AGG - chr1_3:42182057-42182076 None:intergenic 30.0%
! TTTTATAGGGTAGTTTCACA+GGG - chr1_3:42182080-42182099 None:intergenic 30.0%
! ATTTTATAGGGTAGTTTCAC+AGG - chr1_3:42182081-42182100 None:intergenic 30.0%
GTAACACACTATTCTATAGT+TGG - chr1_3:42183226-42183245 None:intergenic 30.0%
AAGAATATCATGCTTAGCAT+AGG + chr1_3:42183256-42183275 Msa0118900:intron 30.0%
! TTGCATTTGTTCTTTTGTCA+AGG - chr1_3:42183443-42183462 None:intergenic 30.0%
TTGACAAAAGAACAAATGCA+AGG + chr1_3:42183442-42183461 Msa0118900:CDS 30.0%
! ATGTATTTCAAGTACACAAG+TGG + chr1_3:42183473-42183492 Msa0118900:CDS 30.0%
! TGTATTTCAAGTACACAAGT+GGG + chr1_3:42183474-42183493 Msa0118900:CDS 30.0%
! TTTTCCAGCAAGAAAGATAT+GGG - chr1_3:42183591-42183610 None:intergenic 30.0%
! TTTTTCCAGCAAGAAAGATA+TGG - chr1_3:42183592-42183611 None:intergenic 30.0%
ATATCTTTCTTGCTGGAAAA+AGG + chr1_3:42183591-42183610 Msa0118900:three_prime_UTR 30.0%
TATCTTTCTTGCTGGAAAAA+GGG + chr1_3:42183592-42183611 Msa0118900:three_prime_UTR 30.0%
AGTTGTGGAAGTTAAAGTTA+TGG - chr1_3:42183853-42183872 None:intergenic 30.0%
TGAATGAATGAATGAAGGAG+CGG - chr1_3:42178555-42178574 None:intergenic 35.0%
! NCGTGAATTTCACACTTTTC+GGG + chr1_3:42178693-42178712 Msa0118900:intron 35.0%
!!! GGTTTAGGTTTTATTGTAGC+TGG + chr1_3:42178996-42179015 Msa0118900:intron 35.0%
!! TGTGTGATTTGTTGATTTGC+TGG + chr1_3:42179097-42179116 Msa0118900:five_prime_UTR 35.0%
!! ATTTGTTGATTTGCTGGAGA+AGG + chr1_3:42179103-42179122 Msa0118900:five_prime_UTR 35.0%
!!! ATTGTTGGAAGGTTTTGAGT+GGG + chr1_3:42179259-42179278 Msa0118900:five_prime_UTR 35.0%
CAACATTTCAACAAATCCCT+CGG - chr1_3:42179318-42179337 None:intergenic 35.0%
GAAGCACGATGAGTTTAAAT+TGG + chr1_3:42179404-42179423 Msa0118900:CDS 35.0%
AACGATTCAGGATTTGAATG+AGG + chr1_3:42179515-42179534 Msa0118900:CDS 35.0%
! TCAATTTAAGCGTTTTGCAG+AGG + chr1_3:42179641-42179660 Msa0118900:CDS 35.0%
AAGTTCAGGCTTATAAACAC+AGG + chr1_3:42179751-42179770 Msa0118900:CDS 35.0%
! AAACACAGGATGATGAGTTT+TGG + chr1_3:42179765-42179784 Msa0118900:CDS 35.0%
! AACACAGGATGATGAGTTTT+GGG + chr1_3:42179766-42179785 Msa0118900:CDS 35.0%
!! TTTAAAGGAGGGTATTCGTA+TGG - chr1_3:42179837-42179856 None:intergenic 35.0%
GGAGAATAGGATTTCTCAAA+TGG + chr1_3:42179956-42179975 Msa0118900:CDS 35.0%
GTTACGGAGAAAGTAATTGT+TGG + chr1_3:42180029-42180048 Msa0118900:CDS 35.0%
TTCAAATTCGAATTGTCCTC+TGG - chr1_3:42180200-42180219 None:intergenic 35.0%
GGACAATTCGAATTTGAAGA+AGG + chr1_3:42180202-42180221 Msa0118900:CDS 35.0%
AAGGTAGATAATGCTTCAGA+AGG + chr1_3:42180221-42180240 Msa0118900:CDS 35.0%
! ACAATTGACTCTGTTCATTC+TGG + chr1_3:42180269-42180288 Msa0118900:CDS 35.0%
! CAATTGACTCTGTTCATTCT+GGG + chr1_3:42180270-42180289 Msa0118900:CDS 35.0%
! AATTGACTCTGTTCATTCTG+GGG + chr1_3:42180271-42180290 Msa0118900:CDS 35.0%
!! CTCGTACTCATTTTTCTTTG+CGG - chr1_3:42180542-42180561 None:intergenic 35.0%
CCTAGATAACGTTTACATAC+AGG - chr1_3:42180872-42180891 None:intergenic 35.0%
CCTGTATGTAAACGTTATCT+AGG + chr1_3:42180869-42180888 Msa0118900:intron 35.0%
!!! TCAGAGTATTTTTTGTGAGG+GGG - chr1_3:42180930-42180949 None:intergenic 35.0%
TTAAGGTCACTTACTTGCTT+TGG - chr1_3:42181158-42181177 None:intergenic 35.0%
! TATGTATGTTCTGAGTAGTC+AGG - chr1_3:42181188-42181207 None:intergenic 35.0%
TTTATGGTGGCTTAAAATGG+CGG - chr1_3:42181269-42181288 None:intergenic 35.0%
! CGTTTTATGGTGGCTTAAAA+TGG - chr1_3:42181272-42181291 None:intergenic 35.0%
CAATCAGTGCTGTCAAATAT+CGG - chr1_3:42181332-42181351 None:intergenic 35.0%
!! GGTAGTTCTTTTGATTCAAG+TGG + chr1_3:42181438-42181457 Msa0118900:intron 35.0%
! AACTTCATAGCATCTAGCTT+TGG + chr1_3:42181562-42181581 Msa0118900:intron 35.0%
TAGTTTCCTCTTTCTAACAC+CGG + chr1_3:42181836-42181855 Msa0118900:intron 35.0%
ACTAACACACTAAATGTTGC+CGG - chr1_3:42181858-42181877 None:intergenic 35.0%
TACAGTTCCATCAAAGCATA+TGG + chr1_3:42181984-42182003 Msa0118900:intron 35.0%
!!! AGTGGAATTGCTATTTTCGA+AGG - chr1_3:42182010-42182029 None:intergenic 35.0%
GACATCATCAAACTGAACTT+TGG - chr1_3:42182121-42182140 None:intergenic 35.0%
AGGATCTCAACTAACTACTT+TGG - chr1_3:42182179-42182198 None:intergenic 35.0%
!!! TTTTTCACCCTGCTTTGTTT+TGG - chr1_3:42182559-42182578 None:intergenic 35.0%
AAAACAAAGCAGGGTGAAAA+AGG + chr1_3:42182558-42182577 Msa0118900:intron 35.0%
AAACAAAGCAGGGTGAAAAA+GGG + chr1_3:42182559-42182578 Msa0118900:intron 35.0%
AGTAGAAAACTACGTTAGAG+AGG + chr1_3:42182582-42182601 Msa0118900:intron 35.0%
GTAGAAAACTACGTTAGAGA+GGG + chr1_3:42182583-42182602 Msa0118900:intron 35.0%
! GTTTCTCAGATATGTTTTCG+TGG - chr1_3:42182768-42182787 None:intergenic 35.0%
GAGAAACCCAATAACAGAAT+TGG + chr1_3:42182781-42182800 Msa0118900:intron 35.0%
CAATCTGCCAATTCTGTTAT+TGG - chr1_3:42182791-42182810 None:intergenic 35.0%
CAATAACAGAATTGGCAGAT+TGG + chr1_3:42182789-42182808 Msa0118900:intron 35.0%
AAACCATACGATTCATACCA+TGG + chr1_3:42182913-42182932 Msa0118900:intron 35.0%
AACCATACGATTCATACCAT+GGG + chr1_3:42182914-42182933 Msa0118900:intron 35.0%
ATTAACAGACAACTTCGCAA+TGG - chr1_3:42182961-42182980 None:intergenic 35.0%
TGTCTGTTAATTATGCTTCC+TGG + chr1_3:42182970-42182989 Msa0118900:intron 35.0%
ACTGCTGTAGGTATATGTTT+GGG + chr1_3:42183385-42183404 Msa0118900:intron 35.0%
GTACTTGAAATACATCTCTG+TGG - chr1_3:42183468-42183487 None:intergenic 35.0%
TTTCCAGCAAGAAAGATATG+GGG - chr1_3:42183590-42183609 None:intergenic 35.0%
GATATGAGCATTCTCTCATA+TGG + chr1_3:42183701-42183720 Msa0118900:three_prime_UTR 35.0%
GAATGAATGAATGAAGGAGC+GGG - chr1_3:42178554-42178573 None:intergenic 40.0%
GGAAAACGGGAATCAATTTC+CGG - chr1_3:42178812-42178831 None:intergenic 40.0%
!!! GATTGTTGGAAGGTTTTGAG+TGG + chr1_3:42179258-42179277 Msa0118900:five_prime_UTR 40.0%
!! TTTGAGTGGGTTTTGATCGA+TGG + chr1_3:42179272-42179291 Msa0118900:exon 40.0%
!! TGGGTTTTGATCGATGGATT+CGG + chr1_3:42179278-42179297 Msa0118900:exon 40.0%
TTGTGGATGTAGTTGTTCCT+TGG + chr1_3:42179341-42179360 Msa0118900:CDS 40.0%
TTCAGAACATTGTTCCACCA+AGG - chr1_3:42179361-42179380 None:intergenic 40.0%
AATGGATGCGATCTGTTAAG+CGG + chr1_3:42179382-42179401 Msa0118900:CDS 40.0%
TAGTGAATTACCTGTGTCGT+CGG + chr1_3:42179428-42179447 Msa0118900:CDS 40.0%
ATGTGTTGTGTTACGTGAGA+TGG + chr1_3:42179476-42179495 Msa0118900:CDS 40.0%
TCAGGATTTGAATGAGGAGT+TGG + chr1_3:42179521-42179540 Msa0118900:CDS 40.0%
! AGGCAATGTCGATGATTTTG+AGG + chr1_3:42179580-42179599 Msa0118900:CDS 40.0%
!!! GATGATTTTGAGGTTGCAGA+GGG + chr1_3:42179590-42179609 Msa0118900:CDS 40.0%
TCAGGAGGAACTTATGTCTT+TGG + chr1_3:42179680-42179699 Msa0118900:CDS 40.0%
AAACTCCTAATGACCGTTTG+AGG + chr1_3:42179928-42179947 Msa0118900:CDS 40.0%
TATTCTCCAAGCTCCTCAAA+CGG - chr1_3:42179944-42179963 None:intergenic 40.0%
CAATAAAATCACCATCCACC+TGG - chr1_3:42180001-42180020 None:intergenic 40.0%
! CAGGTGGATGGTGATTTTAT+TGG + chr1_3:42179999-42180018 Msa0118900:CDS 40.0%
GGTGGGATGTGTAAAGAAAT+AGG + chr1_3:42180110-42180129 Msa0118900:CDS 40.0%
! GGATTATTTCTCTCAACCAG+AGG + chr1_3:42180181-42180200 Msa0118900:CDS 40.0%
GAACCTGTAAAGCCATTATC+CGG - chr1_3:42180299-42180318 None:intergenic 40.0%
ATCATCGAAAACTCCAGCTT+TGG - chr1_3:42180321-42180340 None:intergenic 40.0%
TGATTATGCAACCAGTCCAA+AGG + chr1_3:42180337-42180356 Msa0118900:CDS 40.0%
TGATGATTCCCTGATTCCTT+TGG - chr1_3:42180356-42180375 None:intergenic 40.0%
AATGAGCACAGATAAAGCAC+AGG + chr1_3:42180469-42180488 Msa0118900:CDS 40.0%
!!! CAGAGTATTTTTTGTGAGGG+GGG - chr1_3:42180929-42180948 None:intergenic 40.0%
GTTACATGTGTTATCGATGG+CGG + chr1_3:42181231-42181250 Msa0118900:intron 40.0%
TATGGCCAGTTTGTAAAGGA+TGG - chr1_3:42181306-42181325 None:intergenic 40.0%
TCCTTTACAAACTGGCCATA+TGG + chr1_3:42181306-42181325 Msa0118900:intron 40.0%
!! CTTTTGATTCAAGTGGCCTA+TGG + chr1_3:42181445-42181464 Msa0118900:intron 40.0%
ATGTTAGTCCAGTGCATGTT+GGG - chr1_3:42181644-42181663 None:intergenic 40.0%
AATGTTAGTCCAGTGCATGT+TGG - chr1_3:42181645-42181664 None:intergenic 40.0%
TCCTTCGTATCAATTTCGGT+GGG + chr1_3:42181786-42181805 Msa0118900:intron 40.0%
TGAATTGGGAGATTGTAGCA+CGG + chr1_3:42182229-42182248 Msa0118900:intron 40.0%
GGGAGTTCTTTAGTTGTTTG+TGG - chr1_3:42182436-42182455 None:intergenic 40.0%
TCATGCATCCAAAACAAAGC+AGG + chr1_3:42182548-42182567 Msa0118900:intron 40.0%
CATGCATCCAAAACAAAGCA+GGG + chr1_3:42182549-42182568 Msa0118900:intron 40.0%
TGTTGTAGTCACAGCTAATG+AGG + chr1_3:42182673-42182692 Msa0118900:intron 40.0%
TCTGTGACCCAGTTCATTAA+AGG - chr1_3:42182739-42182758 None:intergenic 40.0%
! CAGATATGTTTTCGTGGGTA+TGG - chr1_3:42182762-42182781 None:intergenic 40.0%
GACGTCATCAAACTGAACTT+CGG - chr1_3:42183043-42183062 None:intergenic 40.0%
ATCGATCCCACTAAATCATG+CGG + chr1_3:42183183-42183202 Msa0118900:intron 40.0%
CATGTACCGCATGATTTAGT+GGG - chr1_3:42183192-42183211 None:intergenic 40.0%
TCATGTACCGCATGATTTAG+TGG - chr1_3:42183193-42183212 None:intergenic 40.0%
GACTGCTGTAGGTATATGTT+TGG + chr1_3:42183384-42183403 Msa0118900:intron 40.0%
TGAGCATTCTCTCATATGGT+TGG + chr1_3:42183705-42183724 Msa0118900:three_prime_UTR 40.0%
!! AGTTGAGTCAGGTTGAGAAT+AGG - chr1_3:42183784-42183803 None:intergenic 40.0%
TTCTCAACCTGACTCAACTA+AGG + chr1_3:42183785-42183804 Msa0118900:three_prime_UTR 40.0%
TCTCAACCTGACTCAACTAA+GGG + chr1_3:42183786-42183805 Msa0118900:three_prime_UTR 40.0%
ACAATACCCTTAGTTGAGTC+AGG - chr1_3:42183795-42183814 None:intergenic 40.0%
! ATGGTGTTTGGTGGGAACAA+TGG - chr1_3:42178530-42178549 None:intergenic 45.0%
AATGAATGAAGGAGCGGGAA+TGG - chr1_3:42178549-42178568 None:intergenic 45.0%
!! TGTTGATTTGCTGGAGAAGG+TGG + chr1_3:42179106-42179125 Msa0118900:five_prime_UTR 45.0%
!! GTTGATTTGCTGGAGAAGGT+GGG + chr1_3:42179107-42179126 Msa0118900:five_prime_UTR 45.0%
GGAAAAAGTTCCATCTCCGA+GGG + chr1_3:42179299-42179318 Msa0118900:CDS 45.0%
TTCAACAAATCCCTCGGAGA+TGG - chr1_3:42179312-42179331 None:intergenic 45.0%
TGGATGTAGTTGTTCCTTGG+TGG + chr1_3:42179344-42179363 Msa0118900:CDS 45.0%
TATGCAGCAGAGAACGATTC+AGG + chr1_3:42179503-42179522 Msa0118900:CDS 45.0%
GGATTTGAATGAGGAGTTGG+AGG + chr1_3:42179524-42179543 Msa0118900:CDS 45.0%
TTTGAATGAGGAGTTGGAGG+AGG + chr1_3:42179527-42179546 Msa0118900:CDS 45.0%
!!! CGATGATTTTGAGGTTGCAG+AGG + chr1_3:42179589-42179608 Msa0118900:CDS 45.0%
! TTTGAGGTTGCAGAGGGAAA+AGG + chr1_3:42179596-42179615 Msa0118900:CDS 45.0%
GGAAAAGGCGGAAGTTCAAA+TGG + chr1_3:42179611-42179630 Msa0118900:CDS 45.0%
GGAGAAAATGACGCATGATC+AGG + chr1_3:42179662-42179681 Msa0118900:CDS 45.0%
GAAAATGACGCATGATCAGG+AGG + chr1_3:42179665-42179684 Msa0118900:CDS 45.0%
!! AAAGGAGGGTATTCGTATGG+AGG - chr1_3:42179834-42179853 None:intergenic 45.0%
AAGCTCCTCAAACGGTCATT+AGG - chr1_3:42179936-42179955 None:intergenic 45.0%
TAATGACCGTTTGAGGAGCT+TGG + chr1_3:42179935-42179954 Msa0118900:CDS 45.0%
GTTTGAGGAGCTTGGAGAAT+AGG + chr1_3:42179943-42179962 Msa0118900:CDS 45.0%
! CAGAGGAAAATTTTCTCGCG+TGG - chr1_3:42180076-42180095 None:intergenic 45.0%
TGTTCTTGGGAGACTCTGTA+GGG - chr1_3:42180145-42180164 None:intergenic 45.0%
TTGTTCTTGGGAGACTCTGT+AGG - chr1_3:42180146-42180165 None:intergenic 45.0%
CAACCAGTCCAAAGGAATCA+GGG + chr1_3:42180345-42180364 Msa0118900:CDS 45.0%
ATTCCCTGATTCCTTTGGAC+TGG - chr1_3:42180351-42180370 None:intergenic 45.0%
GAAGCTTTACATGAGGCTTC+AGG + chr1_3:42180403-42180422 Msa0118900:CDS 45.0%
AGGCTGATAGGGAATCAATG+AGG + chr1_3:42180432-42180451 Msa0118900:CDS 45.0%
TGATAGGGAATCAATGAGGC+AGG + chr1_3:42180436-42180455 Msa0118900:CDS 45.0%
! AGCACAGGTTGTGTTACTGA+AGG + chr1_3:42180484-42180503 Msa0118900:CDS 45.0%
!! TGAACCTTTAGAGCGAGCAA+GGG - chr1_3:42180844-42180863 None:intergenic 45.0%
TAAGCCACCATAAAACGCCA+TGG + chr1_3:42181275-42181294 Msa0118900:intron 45.0%
CACTGCCATCCTTTACAAAC+TGG + chr1_3:42181298-42181317 Msa0118900:intron 45.0%
GCCATATGGCCAGTTTGTAA+AGG - chr1_3:42181310-42181329 None:intergenic 45.0%
GCTGTCAAATATCGGCCATA+TGG - chr1_3:42181324-42181343 None:intergenic 45.0%
! ATAAAGCACCCAACATGCAC+TGG + chr1_3:42181633-42181652 Msa0118900:intron 45.0%
AGTTTCCTCTTTAACCCGCT+TGG + chr1_3:42181697-42181716 Msa0118900:intron 45.0%
GTTTCCTCTTTAACCCGCTT+GGG + chr1_3:42181698-42181717 Msa0118900:intron 45.0%
GAATCGAACCTAAGACCTTG+AGG - chr1_3:42181766-42181785 None:intergenic 45.0%
CTCCTTCGTATCAATTTCGG+TGG + chr1_3:42181785-42181804 Msa0118900:intron 45.0%
! ATGTTGCCGGTGTTAGAAAG+AGG - chr1_3:42181845-42181864 None:intergenic 45.0%
TCGAAGGCCATATGCTTTGA+TGG - chr1_3:42181994-42182013 None:intergenic 45.0%
TGAGATCCTGCACAGTATTG+AGG + chr1_3:42182190-42182209 Msa0118900:intron 45.0%
! ATCCTGCACAGTATTGAGGA+GGG + chr1_3:42182194-42182213 Msa0118900:intron 45.0%
!! TATGGCATTGGCTGGAATTG+GGG - chr1_3:42182862-42182881 None:intergenic 45.0%
!! GTATGGCATTGGCTGGAATT+GGG - chr1_3:42182863-42182882 None:intergenic 45.0%
!! TGTATGGCATTGGCTGGAAT+TGG - chr1_3:42182864-42182883 None:intergenic 45.0%
TGCCCATGGTATGAATCGTA+TGG - chr1_3:42182919-42182938 None:intergenic 45.0%
GTCGCAAGCATTTCAGATGA+TGG - chr1_3:42183367-42183386 None:intergenic 45.0%
TCACTTCTGCACTGAAGTTG+TGG - chr1_3:42183868-42183887 None:intergenic 45.0%
! TTGATTCCCGTTTTCCGCTC+CGG + chr1_3:42178816-42178835 Msa0118900:five_prime_UTR 50.0%
GTGAAGGTAGGGGAAGAGAA+TGG + chr1_3:42179134-42179153 Msa0118900:five_prime_UTR 50.0%
TAGGGGAAGAGAATGGTCGA+TGG + chr1_3:42179141-42179160 Msa0118900:five_prime_UTR 50.0%
CGGAAAAAGTTCCATCTCCG+AGG + chr1_3:42179298-42179317 Msa0118900:CDS 50.0%
GTCGCTTACGTGTGAAGTTC+AGG + chr1_3:42179737-42179756 Msa0118900:CDS 50.0%
!!! GATGAGTTTTGGGTACACCG+AGG + chr1_3:42179776-42179795 Msa0118900:CDS 50.0%
!! TTTTGGGTACACCGAGGATG+AGG + chr1_3:42179782-42179801 Msa0118900:CDS 50.0%
ATCACCTTCGACCTCATCCT+CGG - chr1_3:42179796-42179815 None:intergenic 50.0%
GAAAACTCCCACTTACAGCC+AGG + chr1_3:42179980-42179999 Msa0118900:CDS 50.0%
! CTCGCGTGGCTTGTCAAATT+TGG - chr1_3:42180062-42180081 None:intergenic 50.0%
TCCTCTGACTCAGCAACGTT+CGG + chr1_3:42180089-42180108 Msa0118900:CDS 50.0%
! GCACCGGATAATGGCTTTAC+AGG + chr1_3:42180293-42180312 Msa0118900:CDS 50.0%
GGCTTTACAGGTTCCAAAGC+TGG + chr1_3:42180305-42180324 Msa0118900:CDS 50.0%
GCAACCAGTCCAAAGGAATC+AGG + chr1_3:42180344-42180363 Msa0118900:CDS 50.0%
TTCAGGCACTTGAGGCTGAT+AGG + chr1_3:42180420-42180439 Msa0118900:CDS 50.0%
TCAGGCACTTGAGGCTGATA+GGG + chr1_3:42180421-42180440 Msa0118900:CDS 50.0%
!! GACAAGTACCGAGATCTTGC+AGG - chr1_3:42180569-42180588 None:intergenic 50.0%
ATCTCCCTTGCTCGCTCTAA+AGG + chr1_3:42180837-42180856 Msa0118900:intron 50.0%
!! CTGAACCTTTAGAGCGAGCA+AGG - chr1_3:42180845-42180864 None:intergenic 50.0%
GGGGGAAGATCAGTATCCAA+AGG - chr1_3:42180911-42180930 None:intergenic 50.0%
GTGTGTGTGTGTGTGTGATC+TGG + chr1_3:42180984-42181003 Msa0118900:intron 50.0%
! AGTGCCATGGCGTTTTATGG+TGG - chr1_3:42181282-42181301 None:intergenic 50.0%
TGTAAAGGATGGCAGTGCCA+TGG - chr1_3:42181295-42181314 None:intergenic 50.0%
! TTGAGGAGGAGCACACTACA+AGG - chr1_3:42181749-42181768 None:intergenic 50.0%
TTGTAGTGTGCTCCTCCTCA+AGG + chr1_3:42181748-42181767 Msa0118900:intron 50.0%
TCGAACCTAAGACCTTGAGG+AGG - chr1_3:42181763-42181782 None:intergenic 50.0%
GCCCACCGAAATTGATACGA+AGG - chr1_3:42181790-42181809 None:intergenic 50.0%
! GATCCTGCACAGTATTGAGG+AGG + chr1_3:42182193-42182212 Msa0118900:intron 50.0%
! TCCTGCACAGTATTGAGGAG+GGG + chr1_3:42182195-42182214 Msa0118900:intron 50.0%
! AGTATTGAGGAGGGGTCACA+AGG + chr1_3:42182203-42182222 Msa0118900:intron 50.0%
GGGTCACAAGGTCGTGAATT+GGG + chr1_3:42182215-42182234 Msa0118900:intron 50.0%
ACCGCTCCCATGATTTATCG+CGG + chr1_3:42182821-42182840 Msa0118900:intron 50.0%
GGATCCCCGCGATAAATCAT+GGG - chr1_3:42182830-42182849 None:intergenic 50.0%
!! ATGGCATTGGCTGGAATTGG+GGG - chr1_3:42182861-42182880 None:intergenic 50.0%
!! TGTTCGTGTATGGCATTGGC+TGG - chr1_3:42182870-42182889 None:intergenic 50.0%
GGTGTGTTCGTGTATGGCAT+TGG - chr1_3:42182874-42182893 None:intergenic 50.0%
TGCCATACACGAACACACCA+AGG + chr1_3:42182875-42182894 Msa0118900:intron 50.0%
GCCATACACGAACACACCAA+GGG + chr1_3:42182876-42182895 Msa0118900:intron 50.0%
CCATACACGAACACACCAAG+GGG + chr1_3:42182877-42182896 Msa0118900:intron 50.0%
GAAATGCTTGCGACTGCTGT+AGG + chr1_3:42183373-42183392 Msa0118900:intron 50.0%
CCAGCAAGAAAGATATGGGG+AGG - chr1_3:42183587-42183606 None:intergenic 50.0%
CCTCCCCATATCTTTCTTGC+TGG + chr1_3:42183584-42183603 Msa0118900:three_prime_UTR 50.0%
GAGCGGGAATGGTGTTTGGT+GGG - chr1_3:42178538-42178557 None:intergenic 55.0%
GAAGGAGCGGGAATGGTGTT+TGG - chr1_3:42178542-42178561 None:intergenic 55.0%
AGACGCCGTCGGAGAAACAA+CGG - chr1_3:42178861-42178880 None:intergenic 55.0%
AACCTTGAAGGAGACGCCGT+CGG - chr1_3:42178872-42178891 None:intergenic 55.0%
!! GATTTGCTGGAGAAGGTGGG+TGG + chr1_3:42179110-42179129 Msa0118900:five_prime_UTR 55.0%
TGCTTCCACAGCTGCGAATG+AGG + chr1_3:42179560-42179579 Msa0118900:CDS 55.0%
CATTGCCTCATTCGCAGCTG+TGG - chr1_3:42179568-42179587 None:intergenic 55.0%
GAGGTTGCAGAGGGAAAAGG+CGG + chr1_3:42179599-42179618 Msa0118900:CDS 55.0%
TACACCGAGGATGAGGTCGA+AGG + chr1_3:42179789-42179808 Msa0118900:CDS 55.0%
AACTCCCACTTACAGCCAGG+TGG + chr1_3:42179983-42180002 Msa0118900:CDS 55.0%
CCATCCACCTGGCTGTAAGT+GGG - chr1_3:42179990-42180009 None:intergenic 55.0%
ACCATCCACCTGGCTGTAAG+TGG - chr1_3:42179991-42180010 None:intergenic 55.0%
ACCGAACGTTGCTGAGTCAG+AGG - chr1_3:42180093-42180112 None:intergenic 55.0%
TCTGACTCAGCAACGTTCGG+TGG + chr1_3:42180092-42180111 Msa0118900:CDS 55.0%
CTGACTCAGCAACGTTCGGT+GGG + chr1_3:42180093-42180112 Msa0118900:CDS 55.0%
GGGAGACTCTGTAGGGAACT+CGG - chr1_3:42180138-42180157 None:intergenic 55.0%
!! CTCTGTTCATTCTGGGGCAC+CGG + chr1_3:42180277-42180296 Msa0118900:CDS 55.0%
!! CATTCTGGGGCACCGGATAA+TGG + chr1_3:42180284-42180303 Msa0118900:CDS 55.0%
CATGAGGCTTCAGGCACTTG+AGG + chr1_3:42180412-42180431 Msa0118900:CDS 55.0%
CGAGCAAGCCTGCAAGATCT+CGG + chr1_3:42180558-42180577 Msa0118900:CDS 55.0%
! GGCAGTGCCATGGCGTTTTA+TGG - chr1_3:42181285-42181304 None:intergenic 55.0%
!! CCAACCCAAGCGGGTTAAAG+AGG - chr1_3:42181705-42181724 None:intergenic 55.0%
CCTCTTTAACCCGCTTGGGT+TGG + chr1_3:42181702-42181721 Msa0118900:intron 55.0%
!! TTAACCCGCTTGGGTTGGTC+CGG + chr1_3:42181707-42181726 Msa0118900:intron 55.0%
GTGCTCCTCCTCAAGGTCTT+AGG + chr1_3:42181755-42181774 Msa0118900:intron 55.0%
ACCCCTCCTCAATACTGTGC+AGG - chr1_3:42182199-42182218 None:intergenic 55.0%
GGGGTCACAAGGTCGTGAAT+TGG + chr1_3:42182214-42182233 Msa0118900:intron 55.0%
GCGATAAATCATGGGAGCGG+TGG - chr1_3:42182822-42182841 None:intergenic 55.0%
CCCGCGATAAATCATGGGAG+CGG - chr1_3:42182825-42182844 None:intergenic 55.0%
CCGCTCCCATGATTTATCGC+GGG + chr1_3:42182822-42182841 Msa0118900:intron 55.0%
CGCTCCCATGATTTATCGCG+GGG + chr1_3:42182823-42182842 Msa0118900:intron 55.0%
GGGATCCCCGCGATAAATCA+TGG - chr1_3:42182831-42182850 None:intergenic 55.0%
! CCCCTTGGTGTGTTCGTGTA+TGG - chr1_3:42182880-42182899 None:intergenic 55.0%
TACACGAACACACCAAGGGG+TGG + chr1_3:42182880-42182899 Msa0118900:intron 55.0%
TTTACGGTCTTGCCACCCCT+TGG - chr1_3:42182895-42182914 None:intergenic 55.0%
TGGGCTACCAGCTGACAGTA+TGG + chr1_3:42183404-42183423 Msa0118900:CDS 55.0%
GGGCTACCAGCTGACAGTAT+GGG + chr1_3:42183405-42183424 Msa0118900:CDS 55.0%
AGCAAGCCCATACTGTCAGC+TGG - chr1_3:42183414-42183433 None:intergenic 55.0%
GGAGCGGGAATGGTGTTTGG+TGG - chr1_3:42178539-42178558 None:intergenic 60.0%
AAGGTCGCCGGAGCGGAAAA+CGG - chr1_3:42178826-42178845 None:intergenic 60.0%
GTCGGAGAAACAACGGCAGC+CGG - chr1_3:42178854-42178873 None:intergenic 60.0%
!! GGCTGCCGTTGTTTCTCCGA+CGG + chr1_3:42178853-42178872 Msa0118900:five_prime_UTR 60.0%
AAGGTGGGTGGCGTGAAGGT+AGG + chr1_3:42179122-42179141 Msa0118900:five_prime_UTR 60.0%
AGGTGGGTGGCGTGAAGGTA+GGG + chr1_3:42179123-42179142 Msa0118900:five_prime_UTR 60.0%
! TACCTGTGTCGTCGGTTGCG+CGG + chr1_3:42179436-42179455 Msa0118900:CDS 60.0%
CCCACTTACAGCCAGGTGGA+TGG + chr1_3:42179987-42180006 Msa0118900:CDS 60.0%
!! TTGGGTTGGTCCGGAGGTGT+TGG + chr1_3:42181716-42181735 Msa0118900:intron 60.0%
!! TTGGTCCGGAGGTGTTGGCT+TGG + chr1_3:42181721-42181740 Msa0118900:intron 60.0%
!! TGGTCCGGAGGTGTTGGCTT+GGG + chr1_3:42181722-42181741 Msa0118900:intron 60.0%
AGGACCCAAGCCAACACCTC+CGG - chr1_3:42181729-42181748 None:intergenic 60.0%
! CTGGAATTGGGGGTGCAGCT+GGG - chr1_3:42182851-42182870 None:intergenic 60.0%
AGGTCGCCGGAGCGGAAAAC+GGG - chr1_3:42178825-42178844 None:intergenic 65.0%
GGAGAAACAACGGCAGCCGG+CGG - chr1_3:42178851-42178870 None:intergenic 65.0%
CTCCGACGGCGTCTCCTTCA+AGG + chr1_3:42178867-42178886 Msa0118900:five_prime_UTR 65.0%
GGAGAAGGTGGGTGGCGTGA+AGG + chr1_3:42179118-42179137 Msa0118900:five_prime_UTR 65.0%
GGTGGGTGGCGTGAAGGTAG+GGG + chr1_3:42179124-42179143 Msa0118900:five_prime_UTR 65.0%
! ACCTGTGTCGTCGGTTGCGC+GGG + chr1_3:42179437-42179456 Msa0118900:CDS 65.0%
ACCTCCGGACCAACCCAAGC+GGG - chr1_3:42181714-42181733 None:intergenic 65.0%
CACCTCCGGACCAACCCAAG+CGG - chr1_3:42181715-42181734 None:intergenic 65.0%
! GCTGGAATTGGGGGTGCAGC+TGG - chr1_3:42182852-42182871 None:intergenic 65.0%
ACCCGCGCAACCGACGACAC+AGG - chr1_3:42179441-42179460 None:intergenic 70.0%
!! ACCCGCTTGGGTTGGTCCGG+AGG + chr1_3:42181710-42181729 Msa0118900:intron 70.0%
ACAACGGCAGCCGGCGGCGA+AGG - chr1_3:42178845-42178864 None:intergenic 75.0%
! GGCGGCGAAGGTCGCCGGAG+CGG - chr1_3:42178833-42178852 None:intergenic 80.0%
! GCTCCGGCGACCTTCGCCGC+CGG + chr1_3:42178832-42178851 Msa0118900:five_prime_UTR 80.0%
! CAGCCGGCGGCGAAGGTCGC+CGG - chr1_3:42178838-42178857 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 42178357 42183944 42178357 ID=Msa0118900;Name=Msa0118900
chr1_3 mRNA 42178357 42183944 42178357 ID=Msa0118900-mRNA-1;Parent=Msa0118900;Name=Msa0118900-mRNA-1;_AED=0.01;_eAED=0.01;_QI=637|1|1|1|0|0|5|441|487
chr1_3 exon 42178357 42178593 42178357 ID=Msa0118900-mRNA-1:exon:12751;Parent=Msa0118900-mRNA-1
chr1_3 exon 42178694 42178888 42178694 ID=Msa0118900-mRNA-1:exon:12752;Parent=Msa0118900-mRNA-1
chr1_3 exon 42179086 42180598 42179086 ID=Msa0118900-mRNA-1:exon:12753;Parent=Msa0118900-mRNA-1
chr1_3 exon 42181117 42181163 42181117 ID=Msa0118900-mRNA-1:exon:12754;Parent=Msa0118900-mRNA-1
chr1_3 exon 42183395 42183944 42183395 ID=Msa0118900-mRNA-1:exon:12755;Parent=Msa0118900-mRNA-1
chr1_3 five_prime_UTR 42178357 42178593 42178357 ID=Msa0118900-mRNA-1:five_prime_utr;Parent=Msa0118900-mRNA-1
chr1_3 five_prime_UTR 42178694 42178888 42178694 ID=Msa0118900-mRNA-1:five_prime_utr;Parent=Msa0118900-mRNA-1
chr1_3 five_prime_UTR 42179086 42179290 42179086 ID=Msa0118900-mRNA-1:five_prime_utr;Parent=Msa0118900-mRNA-1
chr1_3 CDS 42179291 42180598 42179291 ID=Msa0118900-mRNA-1:cds;Parent=Msa0118900-mRNA-1
chr1_3 CDS 42181117 42181163 42181117 ID=Msa0118900-mRNA-1:cds;Parent=Msa0118900-mRNA-1
chr1_3 CDS 42183395 42183503 42183395 ID=Msa0118900-mRNA-1:cds;Parent=Msa0118900-mRNA-1
chr1_3 three_prime_UTR 42183504 42183944 42183504 ID=Msa0118900-mRNA-1:three_prime_utr;Parent=Msa0118900-mRNA-1
Gene Sequence

>Msa0118900

ATGGATTCGGAAAAAGTTCCATCTCCGAGGGATTTGTTGAAATGTTGTGATTGTGGATGTAGTTGTTCCTTGGTGGAACAATGTTCTGAAAAATGGATGCGATCTGTTAAGCGGAAGCACGATGAGTTTAAATTGGATAGTGAATTACCTGTGTCGTCGGTTGCGCGGGTTGATATTATGAATGAATGTGTTGTGTTACGTGAGATGGTAAGTATGCAGCAGAGAACGATTCAGGATTTGAATGAGGAGTTGGAGGAGGAGAGAAATTCTGCTTCCACAGCTGCGAATGAGGCAATGTCGATGATTTTGAGGTTGCAGAGGGAAAAGGCGGAAGTTCAAATGGAAGCTCGTCAATTTAAGCGTTTTGCAGAGGAGAAAATGACGCATGATCAGGAGGAACTTATGTCTTTGGAAGATTTGTTGTACAAGAGAGAACAGATAATTCAGTCGCTTACGTGTGAAGTTCAGGCTTATAAACACAGGATGATGAGTTTTGGGTACACCGAGGATGAGGTCGAAGGTGATCAATATGATGATATTCCTCCATACGAATACCCTCCTTTAAAATGTAATGTCATGTATAATGGCATGGATGCTGATAATGACGACACTGATATTGAGAAATATGCATTTGGTGAAACTCCTAATGACCGTTTGAGGAGCTTGGAGAATAGGATTTCTCAAATGGAGAAAACTCCCACTTACAGCCAGGTGGATGGTGATTTTATTGGAAAAAATGTTACGGAGAAAGTAATTGTTGGACAATCTCCAAATTTGACAAGCCACGCGAGAAAATTTTCCTCTGACTCAGCAACGTTCGGTGGGATGTGTAAAGAAATAGGTTCCGAGTTCCCTACAGAGTCTCCCAAGAACAATAACAAGTATAAGAAGGATTATTTCTCTCAACCAGAGGACAATTCGAATTTGAAGAAGGTAGATAATGCTTCAGAAGGTGATGATACGAGTGACAGAATTTATACAATTGACTCTGTTCATTCTGGGGCACCGGATAATGGCTTTACAGGTTCCAAAGCTGGAGTTTTCGATGATTATGCAACCAGTCCAAAGGAATCAGGGAATCATCATGCTGATTTCGAAGATCCCTACATTAAGAAGCTTTACATGAGGCTTCAGGCACTTGAGGCTGATAGGGAATCAATGAGGCAGGCAATCATTTCAATGAGCACAGATAAAGCACAGGTTGTGTTACTGAAGGAAATAGCTCAGCATTTGTGCAAAGAGATGTCACCGCAAAGAAAAATGAGTACGAGCAAGCCTGCAAGATCTCGGTACTTGTCAATTTTTAAGTGGATCACATCAATTGTTTTTTGGAGAAACAAAGCTCACCAAAGCAAGTATATGTTTGGGCTACCAGCTGACAGTATGGGCTTGCTACTGCTCCTTGACAAAAGAACAAATGCAAGGCCACAGAGATGTATTTCAAGTACACAAGTGGGAGATTAA
Protein sequence

>Msa0118900

MDSEKVPSPRDLLKCCDCGCSCSLVEQCSEKWMRSVKRKHDEFKLDSELPVSSVARVDIMNECVVLREMVSMQQRTIQDLNEELEEERNSASTAANEAMSMILRLQREKAEVQMEARQFKRFAEEKMTHDQEELMSLEDLLYKREQIIQSLTCEVQAYKHRMMSFGYTEDEVEGDQYDDIPPYEYPPLKCNVMYNGMDADNDDTDIEKYAFGETPNDRLRSLENRISQMEKTPTYSQVDGDFIGKNVTEKVIVGQSPNLTSHARKFSSDSATFGGMCKEIGSEFPTESPKNNNKYKKDYFSQPEDNSNLKKVDNASEGDDTSDRIYTIDSVHSGAPDNGFTGSKAGVFDDYATSPKESGNHHADFEDPYIKKLYMRLQALEADRESMRQAIISMSTDKAQVVLLKEIAQHLCKEMSPQRKMSTSKPARSRYLSIFKWITSIVFWRNKAHQSKYMFGLPADSMGLLLLLDKRTNARPQRCISSTQVGD*