Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1109350 | XP_003623361.1 | 93.529 | 170 | 3 | 1 | 1 | 162 | 1 | 170 | 1.09e-108 | 317 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1109350 | sp|Q9M015|Y5161_ARATH | 68.824 | 170 | 45 | 1 | 1 | 162 | 1 | 170 | 2.78e-86 | 253 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1109350 | G7KT78 | 93.529 | 170 | 3 | 1 | 1 | 162 | 1 | 170 | 5.20e-109 | 317 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004060 | Msa1109350 | 0.806884 | 6.623274e-50 | -8.615850e-47 |
Msa0006880 | Msa1109350 | 0.859811 | 3.193493e-63 | -8.615850e-47 |
Msa0007850 | Msa1109350 | 0.820031 | 8.501309e-53 | -8.615850e-47 |
Msa0008410 | Msa1109350 | 0.807052 | 6.100613e-50 | -8.615850e-47 |
Msa0010490 | Msa1109350 | 0.834021 | 3.812053e-56 | -8.615850e-47 |
Msa0010500 | Msa1109350 | 0.850525 | 1.605391e-60 | -8.615850e-47 |
Msa0015140 | Msa1109350 | 0.824928 | 6.187465e-54 | -8.615850e-47 |
Msa0020390 | Msa1109350 | 0.833632 | 4.769552e-56 | -8.615850e-47 |
Msa0020410 | Msa1109350 | 0.809335 | 1.991345e-50 | -8.615850e-47 |
Msa0025740 | Msa1109350 | 0.802217 | 6.229796e-49 | -8.615850e-47 |
Msa0026660 | Msa1109350 | 0.816603 | 5.079139e-52 | -8.615850e-47 |
Msa0026910 | Msa1109350 | 0.805905 | 1.065082e-49 | -8.615850e-47 |
Msa0029260 | Msa1109350 | 0.838398 | 2.945143e-57 | -8.615850e-47 |
Msa0030300 | Msa1109350 | 0.818840 | 1.589072e-52 | -8.615850e-47 |
Msa0032260 | Msa1109350 | 0.803656 | 3.141340e-49 | -8.615850e-47 |
Msa0033880 | Msa1109350 | 0.841205 | 5.471693e-58 | -8.615850e-47 |
Msa0037160 | Msa1109350 | 0.830186 | 3.384430e-55 | -8.615850e-47 |
Msa0037840 | Msa1109350 | 0.831027 | 2.105929e-55 | -8.615850e-47 |
Msa0037880 | Msa1109350 | 0.803472 | 3.430556e-49 | -8.615850e-47 |
Msa0052860 | Msa1109350 | 0.830720 | 2.505490e-55 | -8.615850e-47 |
Msa0055100 | Msa1109350 | 0.810934 | 9.003926e-51 | -8.615850e-47 |
Msa0055150 | Msa1109350 | 0.884590 | 1.684469e-71 | -8.615850e-47 |
Msa0057140 | Msa1109350 | 0.815016 | 1.147237e-51 | -8.615850e-47 |
Msa0059950 | Msa1109350 | 0.805147 | 1.536286e-49 | -8.615850e-47 |
Msa0065650 | Msa1109350 | 0.816434 | 5.542253e-52 | -8.615850e-47 |
Msa0068020 | Msa1109350 | 0.832645 | 8.401081e-56 | -8.615850e-47 |
Msa0074750 | Msa1109350 | 0.804348 | 2.255057e-49 | -8.615850e-47 |
Msa0076000 | Msa1109350 | 0.805732 | 1.158021e-49 | -8.615850e-47 |
Msa0077900 | Msa1109350 | 0.809425 | 1.904105e-50 | -8.615850e-47 |
Msa0081650 | Msa1109350 | 0.820095 | 8.218326e-53 | -8.615850e-47 |
Msa0082680 | Msa1109350 | -0.814162 | 1.772796e-51 | -8.615850e-47 |
Msa0090030 | Msa1109350 | 0.831549 | 1.567534e-55 | -8.615850e-47 |
Msa0090520 | Msa1109350 | 0.811569 | 6.558015e-51 | -8.615850e-47 |
Msa0090550 | Msa1109350 | 0.817078 | 3.974154e-52 | -8.615850e-47 |
Msa0097950 | Msa1109350 | 0.820205 | 7.756917e-53 | -8.615850e-47 |
Msa0100800 | Msa1109350 | 0.805200 | 1.497411e-49 | -8.615850e-47 |
Msa0101180 | Msa1109350 | 0.803254 | 3.805842e-49 | -8.615850e-47 |
Msa0103790 | Msa1109350 | 0.808054 | 3.739800e-50 | -8.615850e-47 |
Msa0108870 | Msa1109350 | 0.803909 | 2.783643e-49 | -8.615850e-47 |
Msa0115370 | Msa1109350 | 0.809699 | 1.663376e-50 | -8.615850e-47 |
Msa0118000 | Msa1109350 | 0.806023 | 1.005952e-49 | -8.615850e-47 |
Msa0118900 | Msa1109350 | 0.807904 | 4.024758e-50 | -8.615850e-47 |
Msa0603670 | Msa1109350 | 0.841022 | 6.111410e-58 | -8.615850e-47 |
Msa0607690 | Msa1109350 | 0.813146 | 2.967283e-51 | -8.615850e-47 |
Msa0609000 | Msa1109350 | 0.817947 | 2.531841e-52 | -8.615850e-47 |
Msa0610130 | Msa1109350 | 0.817615 | 3.007480e-52 | -8.615850e-47 |
Msa0610180 | Msa1109350 | 0.807248 | 5.546925e-50 | -8.615850e-47 |
Msa0610390 | Msa1109350 | 0.807888 | 4.055859e-50 | -8.615850e-47 |
Msa0610500 | Msa1109350 | 0.804158 | 2.470335e-49 | -8.615850e-47 |
Msa0614510 | Msa1109350 | 0.809372 | 1.954525e-50 | -8.615850e-47 |
Msa0618930 | Msa1109350 | 0.805999 | 1.017652e-49 | -8.615850e-47 |
Msa0618950 | Msa1109350 | 0.823039 | 1.716733e-53 | -8.615850e-47 |
Msa0618970 | Msa1109350 | 0.821142 | 4.724871e-53 | -8.615850e-47 |
Msa0619920 | Msa1109350 | 0.807962 | 3.912149e-50 | -8.615850e-47 |
Msa0620330 | Msa1109350 | 0.836074 | 1.157851e-56 | -8.615850e-47 |
Msa0620620 | Msa1109350 | 0.830603 | 2.675974e-55 | -8.615850e-47 |
Msa0628290 | Msa1109350 | 0.833240 | 5.974877e-56 | -8.615850e-47 |
Msa0628420 | Msa1109350 | 0.814774 | 1.298004e-51 | -8.615850e-47 |
Msa0641140 | Msa1109350 | 0.854287 | 1.361430e-61 | -8.615850e-47 |
Msa0644660 | Msa1109350 | 0.808139 | 3.586015e-50 | -8.615850e-47 |
Msa0647930 | Msa1109350 | 0.835822 | 1.341351e-56 | -8.615850e-47 |
Msa0647950 | Msa1109350 | 0.830373 | 3.046921e-55 | -8.615850e-47 |
Msa0651150 | Msa1109350 | 0.807216 | 5.632565e-50 | -8.615850e-47 |
Msa0651930 | Msa1109350 | 0.834876 | 2.325342e-56 | -8.615850e-47 |
Msa0652300 | Msa1109350 | 0.824633 | 7.261063e-54 | -8.615850e-47 |
Msa0652690 | Msa1109350 | 0.808455 | 3.070571e-50 | -8.615850e-47 |
Msa0654870 | Msa1109350 | 0.803377 | 3.588272e-49 | -8.615850e-47 |
Msa0659140 | Msa1109350 | 0.818748 | 1.667157e-52 | -8.615850e-47 |
Msa0661090 | Msa1109350 | 0.823747 | 1.172512e-53 | -8.615850e-47 |
Msa0662630 | Msa1109350 | 0.836631 | 8.357884e-57 | -8.615850e-47 |
Msa0663900 | Msa1109350 | 0.808089 | 3.675419e-50 | -8.615850e-47 |
Msa0664760 | Msa1109350 | 0.803043 | 4.207606e-49 | -8.615850e-47 |
Msa0667790 | Msa1109350 | 0.816461 | 5.465945e-52 | -8.615850e-47 |
Msa0672100 | Msa1109350 | 0.812702 | 3.711124e-51 | -8.615850e-47 |
Msa0679680 | Msa1109350 | 0.827346 | 1.645540e-54 | -8.615850e-47 |
Msa0686080 | Msa1109350 | 0.805302 | 1.425552e-49 | -8.615850e-47 |
Msa0687230 | Msa1109350 | 0.817000 | 4.137976e-52 | -8.615850e-47 |
Msa0691900 | Msa1109350 | 0.812364 | 4.401202e-51 | -8.615850e-47 |
Msa0694840 | Msa1109350 | 0.852615 | 4.111077e-61 | -8.615850e-47 |
Msa0695920 | Msa1109350 | 0.805772 | 1.136154e-49 | -8.615850e-47 |
Msa0697720 | Msa1109350 | 0.800736 | 1.252886e-48 | -8.615850e-47 |
Msa0699190 | Msa1109350 | 0.801553 | 8.527266e-49 | -8.615850e-47 |
Msa0700860 | Msa1109350 | 0.800615 | 1.326037e-48 | -8.615850e-47 |
Msa0700920 | Msa1109350 | 0.807547 | 4.792934e-50 | -8.615850e-47 |
Msa0702270 | Msa1109350 | 0.802281 | 6.044214e-49 | -8.615850e-47 |
Msa0703230 | Msa1109350 | 0.810499 | 1.118253e-50 | -8.615850e-47 |
Msa0703910 | Msa1109350 | 0.818557 | 1.841795e-52 | -8.615850e-47 |
Msa0705390 | Msa1109350 | 0.814490 | 1.500701e-51 | -8.615850e-47 |
Msa0705600 | Msa1109350 | 0.815769 | 7.801649e-52 | -8.615850e-47 |
Msa0706390 | Msa1109350 | 0.806790 | 6.930621e-50 | -8.615850e-47 |
Msa0726080 | Msa1109350 | 0.870234 | 1.701658e-66 | -8.615850e-47 |
Msa0742150 | Msa1109350 | 0.806469 | 8.103796e-50 | -8.615850e-47 |
Msa0745200 | Msa1109350 | 0.803705 | 3.068930e-49 | -8.615850e-47 |
Msa0748430 | Msa1109350 | 0.805345 | 1.396406e-49 | -8.615850e-47 |
Msa0748920 | Msa1109350 | 0.804729 | 1.878615e-49 | -8.615850e-47 |
Msa0758230 | Msa1109350 | 0.807185 | 5.719022e-50 | -8.615850e-47 |
Msa0764690 | Msa1109350 | 0.837192 | 6.007727e-57 | -8.615850e-47 |
Msa0774750 | Msa1109350 | 0.812036 | 5.188125e-51 | -8.615850e-47 |
Msa0780880 | Msa1109350 | 0.803817 | 2.908844e-49 | -8.615850e-47 |
Msa0784380 | Msa1109350 | 0.813474 | 2.512899e-51 | -8.615850e-47 |
Msa0788110 | Msa1109350 | 0.813571 | 2.392391e-51 | -8.615850e-47 |
Msa0796440 | Msa1109350 | 0.815422 | 9.322795e-52 | -8.615850e-47 |
Msa0800370 | Msa1109350 | 0.821657 | 3.593322e-53 | -8.615850e-47 |
Msa0801730 | Msa1109350 | 0.800273 | 1.556797e-48 | -8.615850e-47 |
Msa0807070 | Msa1109350 | -0.812848 | 3.447624e-51 | -8.615850e-47 |
Msa0812290 | Msa1109350 | 0.804815 | 1.802315e-49 | -8.615850e-47 |
Msa0818770 | Msa1109350 | 0.802528 | 5.374279e-49 | -8.615850e-47 |
Msa0820530 | Msa1109350 | -0.806285 | 8.857994e-50 | -8.615850e-47 |
Msa0821190 | Msa1109350 | 0.803409 | 3.535229e-49 | -8.615850e-47 |
Msa0823500 | Msa1109350 | 0.824150 | 9.435164e-54 | -8.615850e-47 |
Msa0826500 | Msa1109350 | 0.806747 | 7.077442e-50 | -8.615850e-47 |
Msa0826760 | Msa1109350 | 0.817510 | 3.177156e-52 | -8.615850e-47 |
Msa0827280 | Msa1109350 | 0.851923 | 6.467137e-61 | -8.615850e-47 |
Msa0828680 | Msa1109350 | 0.800290 | 1.544455e-48 | -8.615850e-47 |
Msa0121820 | Msa1109350 | 0.817560 | 3.095180e-52 | -8.615850e-47 |
Msa0126770 | Msa1109350 | 0.800965 | 1.124881e-48 | -8.615850e-47 |
Msa0126880 | Msa1109350 | 0.801275 | 9.721776e-49 | -8.615850e-47 |
Msa0127850 | Msa1109350 | 0.854344 | 1.310521e-61 | -8.615850e-47 |
Msa0131450 | Msa1109350 | 0.819700 | 1.012072e-52 | -8.615850e-47 |
Msa0135420 | Msa1109350 | 0.801068 | 1.071707e-48 | -8.615850e-47 |
Msa0137990 | Msa1109350 | 0.809377 | 1.949898e-50 | -8.615850e-47 |
Msa0146080 | Msa1109350 | 0.805942 | 1.046415e-49 | -8.615850e-47 |
Msa0150260 | Msa1109350 | 0.816211 | 6.215136e-52 | -8.615850e-47 |
Msa0156700 | Msa1109350 | 0.831194 | 1.916908e-55 | -8.615850e-47 |
Msa0159420 | Msa1109350 | 0.803138 | 4.021890e-49 | -8.615850e-47 |
Msa0165440 | Msa1109350 | 0.808777 | 2.621945e-50 | -8.615850e-47 |
Msa0166750 | Msa1109350 | 0.827225 | 1.759402e-54 | -8.615850e-47 |
Msa0167980 | Msa1109350 | 0.835645 | 1.487716e-56 | -8.615850e-47 |
Msa0169300 | Msa1109350 | 0.836870 | 7.261815e-57 | -8.615850e-47 |
Msa0174000 | Msa1109350 | 0.826498 | 2.624226e-54 | -8.615850e-47 |
Msa0174390 | Msa1109350 | 0.808614 | 2.840149e-50 | -8.615850e-47 |
Msa0175200 | Msa1109350 | 0.800219 | 1.597292e-48 | -8.615850e-47 |
Msa0177210 | Msa1109350 | 0.834905 | 2.286607e-56 | -8.615850e-47 |
Msa0183460 | Msa1109350 | 0.804643 | 1.957524e-49 | -8.615850e-47 |
Msa0183870 | Msa1109350 | 0.833380 | 5.513130e-56 | -8.615850e-47 |
Msa0183900 | Msa1109350 | 0.811075 | 8.393170e-51 | -8.615850e-47 |
Msa0186890 | Msa1109350 | 0.806759 | 7.038574e-50 | -8.615850e-47 |
Msa0189520 | Msa1109350 | 0.806528 | 7.875635e-50 | -8.615850e-47 |
Msa0197510 | Msa1109350 | 0.828390 | 9.232189e-55 | -8.615850e-47 |
Msa0197520 | Msa1109350 | 0.849365 | 3.389067e-60 | -8.615850e-47 |
Msa0197610 | Msa1109350 | 0.817779 | 2.762234e-52 | -8.615850e-47 |
Msa0199690 | Msa1109350 | 0.816939 | 4.270196e-52 | -8.615850e-47 |
Msa0208810 | Msa1109350 | 0.821580 | 3.743284e-53 | -8.615850e-47 |
Msa0209080 | Msa1109350 | 0.818925 | 1.519438e-52 | -8.615850e-47 |
Msa0218350 | Msa1109350 | 0.802929 | 4.442803e-49 | -8.615850e-47 |
Msa0224030 | Msa1109350 | 0.835369 | 1.746917e-56 | -8.615850e-47 |
Msa0231790 | Msa1109350 | 0.800503 | 1.397713e-48 | -8.615850e-47 |
Msa0231880 | Msa1109350 | 0.831977 | 1.229102e-55 | -8.615850e-47 |
Msa0365860 | Msa1109350 | 0.801357 | 9.353257e-49 | -8.615850e-47 |
Msa0378970 | Msa1109350 | 0.819155 | 1.347557e-52 | -8.615850e-47 |
Msa0379570 | Msa1109350 | 0.838557 | 2.680155e-57 | -8.615850e-47 |
Msa0384880 | Msa1109350 | 0.838617 | 2.585529e-57 | -8.615850e-47 |
Msa0385490 | Msa1109350 | 0.814357 | 1.605224e-51 | -8.615850e-47 |
Msa0389510 | Msa1109350 | 0.826578 | 2.512361e-54 | -8.615850e-47 |
Msa0408390 | Msa1109350 | 0.805000 | 1.649107e-49 | -8.615850e-47 |
Msa0410300 | Msa1109350 | 0.815468 | 9.105858e-52 | -8.615850e-47 |
Msa0419520 | Msa1109350 | 0.846171 | 2.567794e-59 | -8.615850e-47 |
Msa0428050 | Msa1109350 | 0.825960 | 3.524245e-54 | -8.615850e-47 |
Msa0435220 | Msa1109350 | 0.815102 | 1.098102e-51 | -8.615850e-47 |
Msa0439890 | Msa1109350 | 0.827993 | 1.150570e-54 | -8.615850e-47 |
Msa0453690 | Msa1109350 | 0.812560 | 3.986915e-51 | -8.615850e-47 |
Msa0461590 | Msa1109350 | 0.822763 | 1.990786e-53 | -8.615850e-47 |
Msa0465550 | Msa1109350 | 0.815681 | 8.161754e-52 | -8.615850e-47 |
Msa0467780 | Msa1109350 | 0.823040 | 1.715573e-53 | -8.615850e-47 |
Msa0468320 | Msa1109350 | 0.833776 | 4.392063e-56 | -8.615850e-47 |
Msa0471420 | Msa1109350 | 0.801181 | 1.016424e-48 | -8.615850e-47 |
Msa0474390 | Msa1109350 | 0.801837 | 7.457361e-49 | -8.615850e-47 |
Msa0479330 | Msa1109350 | 0.818799 | 1.622923e-52 | -8.615850e-47 |
Msa0480780 | Msa1109350 | 0.815191 | 1.049019e-51 | -8.615850e-47 |
Msa0980540 | Msa1109350 | 0.812307 | 4.528421e-51 | -8.615850e-47 |
Msa0980940 | Msa1109350 | 0.825714 | 4.032502e-54 | -8.615850e-47 |
Msa0994290 | Msa1109350 | 0.826443 | 2.704873e-54 | -8.615850e-47 |
Msa0994390 | Msa1109350 | 0.822419 | 2.392884e-53 | -8.615850e-47 |
Msa0997430 | Msa1109350 | 0.802589 | 5.222218e-49 | -8.615850e-47 |
Msa1014420 | Msa1109350 | 0.802122 | 6.518040e-49 | -8.615850e-47 |
Msa1025260 | Msa1109350 | 0.997870 | 5.958312e-251 | -8.615850e-47 |
Msa1025940 | Msa1109350 | 0.846102 | 2.682087e-59 | -8.615850e-47 |
Msa1029970 | Msa1109350 | 0.810638 | 1.043433e-50 | -8.615850e-47 |
Msa1033970 | Msa1109350 | 0.803113 | 4.070232e-49 | -8.615850e-47 |
Msa1040800 | Msa1109350 | 0.826347 | 2.851092e-54 | -8.615850e-47 |
Msa1040840 | Msa1109350 | 0.845859 | 3.122485e-59 | -8.615850e-47 |
Msa1041520 | Msa1109350 | 0.804258 | 2.354954e-49 | -8.615850e-47 |
Msa1050420 | Msa1109350 | 0.802238 | 6.169414e-49 | -8.615850e-47 |
Msa1054010 | Msa1109350 | 0.815204 | 1.042123e-51 | -8.615850e-47 |
Msa1063510 | Msa1109350 | 0.803003 | 4.289719e-49 | -8.615850e-47 |
Msa1070390 | Msa1109350 | 0.823598 | 1.270779e-53 | -8.615850e-47 |
Msa1071320 | Msa1109350 | 0.810969 | 8.846978e-51 | -8.615850e-47 |
Msa1077030 | Msa1109350 | 0.805235 | 1.472457e-49 | -8.615850e-47 |
Msa1081560 | Msa1109350 | 0.819923 | 8.999870e-53 | -8.615850e-47 |
Msa1081790 | Msa1109350 | -0.802292 | 6.013136e-49 | -8.615850e-47 |
Msa1082690 | Msa1109350 | 0.806313 | 8.739713e-50 | -8.615850e-47 |
Msa1083880 | Msa1109350 | 0.809738 | 1.631331e-50 | -8.615850e-47 |
Msa1089320 | Msa1109350 | 0.847072 | 1.457505e-59 | -8.615850e-47 |
Msa1089840 | Msa1109350 | 0.827546 | 1.473564e-54 | -8.615850e-47 |
Msa1093330 | Msa1109350 | 0.807279 | 5.462562e-50 | -8.615850e-47 |
Msa0239490 | Msa1109350 | 0.802450 | 5.577412e-49 | -8.615850e-47 |
Msa0247060 | Msa1109350 | 0.811452 | 6.952981e-51 | -8.615850e-47 |
Msa0264530 | Msa1109350 | 0.805172 | 1.517652e-49 | -8.615850e-47 |
Msa0269470 | Msa1109350 | 0.806153 | 9.444667e-50 | -8.615850e-47 |
Msa0271810 | Msa1109350 | 0.800759 | 1.239611e-48 | -8.615850e-47 |
Msa0275360 | Msa1109350 | 0.810874 | 9.278850e-51 | -8.615850e-47 |
Msa0280430 | Msa1109350 | 0.816142 | 6.440677e-52 | -8.615850e-47 |
Msa0288730 | Msa1109350 | 0.807250 | 5.539900e-50 | -8.615850e-47 |
Msa0291500 | Msa1109350 | 0.811357 | 7.289113e-51 | -8.615850e-47 |
Msa0291520 | Msa1109350 | 0.808006 | 3.828558e-50 | -8.615850e-47 |
Msa0296920 | Msa1109350 | 0.819813 | 9.534880e-53 | -8.615850e-47 |
Msa0304590 | Msa1109350 | 0.817808 | 2.720961e-52 | -8.615850e-47 |
Msa0304660 | Msa1109350 | 0.826312 | 2.906756e-54 | -8.615850e-47 |
Msa0307560 | Msa1109350 | 0.822052 | 2.910866e-53 | -8.615850e-47 |
Msa0310410 | Msa1109350 | 0.806440 | 8.216414e-50 | -8.615850e-47 |
Msa0316900 | Msa1109350 | 0.807602 | 4.666308e-50 | -8.615850e-47 |
Msa0316910 | Msa1109350 | 0.805679 | 1.188236e-49 | -8.615850e-47 |
Msa0320610 | Msa1109350 | 0.819467 | 1.143893e-52 | -8.615850e-47 |
Msa0324240 | Msa1109350 | 0.832641 | 8.419234e-56 | -8.615850e-47 |
Msa0329350 | Msa1109350 | 0.818557 | 1.842532e-52 | -8.615850e-47 |
Msa0331700 | Msa1109350 | 0.826356 | 2.837341e-54 | -8.615850e-47 |
Msa1109350 | Msa1113590 | 0.824744 | 6.836067e-54 | -8.615850e-47 |
Msa1109350 | Msa1128330 | 0.808338 | 3.252401e-50 | -8.615850e-47 |
Msa1109350 | Msa1130670 | -0.814922 | 1.203951e-51 | -8.615850e-47 |
Msa1109350 | Msa1133400 | 0.821619 | 3.666317e-53 | -8.615850e-47 |
Msa1109350 | Msa1135800 | -0.826075 | 3.309340e-54 | -8.615850e-47 |
Msa1109350 | Msa1135810 | -0.813587 | 2.374145e-51 | -8.615850e-47 |
Msa1109350 | Msa1145240 | 0.825048 | 5.797822e-54 | -8.615850e-47 |
Msa1109350 | Msa1158230 | 0.820054 | 8.400350e-53 | -8.615850e-47 |
Msa1109350 | Msa1158770 | 0.800727 | 1.258084e-48 | -8.615850e-47 |
Msa1109350 | Msa1166410 | 0.805043 | 1.614659e-49 | -8.615850e-47 |
Msa1109350 | Msa1166870 | 0.805679 | 1.187945e-49 | -8.615850e-47 |
Msa1109350 | Msa1178050 | 0.810622 | 1.051837e-50 | -8.615850e-47 |
Msa1109350 | Msa1178060 | 0.813447 | 2.548302e-51 | -8.615850e-47 |
Msa1109350 | Msa1184370 | 0.817336 | 3.477463e-52 | -8.615850e-47 |
Msa1109350 | Msa1201830 | 0.802420 | 5.657567e-49 | -8.615850e-47 |
Msa1109350 | Msa1202150 | 0.805325 | 1.410025e-49 | -8.615850e-47 |
Msa1109350 | Msa1202580 | 0.804847 | 1.774933e-49 | -8.615850e-47 |
Msa1109350 | Msa1203880 | 0.840952 | 6.377048e-58 | -8.615850e-47 |
Msa1109350 | Msa1206310 | 0.828969 | 6.688002e-55 | -8.615850e-47 |
Msa1109350 | Msa1206360 | 0.829002 | 6.568141e-55 | -8.615850e-47 |
Msa1109350 | Msa1206650 | 0.809424 | 1.905290e-50 | -8.615850e-47 |
Msa1109350 | Msa1207730 | 0.827780 | 1.294779e-54 | -8.615850e-47 |
Msa1109350 | Msa1211830 | 0.821234 | 4.499843e-53 | -8.615850e-47 |
Msa1109350 | Msa1227690 | 0.824783 | 6.693894e-54 | -8.615850e-47 |
Msa1109350 | Msa1234980 | 0.805008 | 1.642121e-49 | -8.615850e-47 |
Msa1109350 | Msa1250110 | 0.800866 | 1.179050e-48 | -8.615850e-47 |
Msa1109350 | Msa1254710 | 0.816833 | 4.509785e-52 | -8.615850e-47 |
Msa1109350 | Msa1256470 | 0.809904 | 1.502572e-50 | -8.615850e-47 |
Msa1109350 | Msa1256770 | 0.801710 | 7.919212e-49 | -8.615850e-47 |
Msa1109350 | Msa1269300 | 0.820872 | 5.450625e-53 | -8.615850e-47 |
Msa1109350 | Msa1278900 | 0.834829 | 2.390766e-56 | -8.615850e-47 |
Msa1109350 | Msa1282240 | 0.847438 | 1.156260e-59 | -8.615850e-47 |
Msa1109350 | Msa1293590 | 0.821233 | 4.502853e-53 | -8.615850e-47 |
Msa1109350 | Msa1294840 | 0.822334 | 2.504825e-53 | -8.615850e-47 |
Msa1109350 | Msa1296830 | 0.812541 | 4.025014e-51 | -8.615850e-47 |
Msa1109350 | Msa1299700 | 0.802926 | 4.448131e-49 | -8.615850e-47 |
Msa1109350 | Msa1307180 | 0.828870 | 7.068634e-55 | -8.615850e-47 |
Msa1109350 | Msa1307550 | 0.805982 | 1.026314e-49 | -8.615850e-47 |
Msa1109350 | Msa1310690 | 0.803833 | 2.886112e-49 | -8.615850e-47 |
Msa1109350 | Msa1316360 | 0.823574 | 1.287270e-53 | -8.615850e-47 |
Msa1109350 | Msa1316440 | 0.803146 | 4.007438e-49 | -8.615850e-47 |
Msa1109350 | Msa1336560 | 0.823628 | 1.250246e-53 | -8.615850e-47 |
Msa1109350 | Msa1340810 | 0.815150 | 1.071556e-51 | -8.615850e-47 |
Msa1109350 | Msa1340830 | 0.842510 | 2.474668e-58 | -8.615850e-47 |
Msa1109350 | Msa1346750 | 0.800799 | 1.216352e-48 | -8.615850e-47 |
Msa1109350 | Msa1355700 | 0.809736 | 1.632505e-50 | -8.615850e-47 |
Msa1109350 | Msa1358480 | 0.818952 | 1.498550e-52 | -8.615850e-47 |
Msa1109350 | Msa1359270 | 0.812463 | 4.186969e-51 | -8.615850e-47 |
Msa1109350 | Msa1360140 | 0.838049 | 3.621261e-57 | -8.615850e-47 |
Msa1109350 | Msa1363700 | 0.827762 | 1.308119e-54 | -8.615850e-47 |
Msa1109350 | Msa1364210 | 0.849083 | 4.059655e-60 | -8.615850e-47 |
Msa1109350 | Msa1365860 | 0.826179 | 3.127384e-54 | -8.615850e-47 |
Msa1109350 | Msa1371090 | 0.839466 | 1.558371e-57 | -8.615850e-47 |
Msa1109350 | Msa1371240 | 0.836112 | 1.132556e-56 | -8.615850e-47 |
Msa1109350 | Msa1372310 | 0.813124 | 2.999554e-51 | -8.615850e-47 |
Msa1109350 | Msa1376650 | 0.828874 | 7.053764e-55 | -8.615850e-47 |
Msa1109350 | Msa1381480 | 0.841349 | 5.015967e-58 | -8.615850e-47 |
Msa1109350 | Msa1382790 | 0.815942 | 7.139184e-52 | -8.615850e-47 |
Msa1109350 | Msa1384870 | 0.838130 | 3.451397e-57 | -8.615850e-47 |
Msa1109350 | Msa1388860 | 0.808244 | 3.406753e-50 | -8.615850e-47 |
Msa1109350 | Msa1389850 | 0.835509 | 1.610193e-56 | -8.615850e-47 |
Msa1109350 | Msa1389880 | 0.818694 | 1.715103e-52 | -8.615850e-47 |
Msa1109350 | Msa1395600 | -0.802069 | 6.682934e-49 | -8.615850e-47 |
Msa1109350 | Msa1407190 | 0.822421 | 2.390941e-53 | -8.615850e-47 |
Msa1109350 | Msa1407970 | 0.803085 | 4.124507e-49 | -8.615850e-47 |
Msa1109350 | Msa1416370 | 0.801162 | 1.025712e-48 | -8.615850e-47 |
Msa1109350 | Msa1424780 | 0.821478 | 3.952790e-53 | -8.615850e-47 |
Msa1109350 | Msa1430410 | 0.803704 | 3.069466e-49 | -8.615850e-47 |
Msa1109350 | Msa1432130 | 0.810764 | 9.800099e-51 | -8.615850e-47 |
Msa1109350 | Msa1436520 | 0.823357 | 1.446512e-53 | -8.615850e-47 |
Msa1109350 | Msa1437270 | 0.801910 | 7.204137e-49 | -8.615850e-47 |
Msa1109350 | Msa1447890 | 0.802028 | 6.811662e-49 | -8.615850e-47 |
Msa1109350 | Msa1448490 | 0.800551 | 1.366694e-48 | -8.615850e-47 |
Msa1109350 | Msa1450280 | 0.805825 | 1.107102e-49 | -8.615850e-47 |
Msa1109350 | Msa1454680 | 0.814297 | 1.655371e-51 | -8.615850e-47 |
Msa0511770 | Msa1109350 | 0.801635 | 8.203366e-49 | -8.615850e-47 |
Msa0514180 | Msa1109350 | 0.816961 | 4.222372e-52 | -8.615850e-47 |
Msa0517090 | Msa1109350 | 0.813658 | 2.290032e-51 | -8.615850e-47 |
Msa0517640 | Msa1109350 | 0.801863 | 7.365546e-49 | -8.615850e-47 |
Msa0518440 | Msa1109350 | 0.830196 | 3.364617e-55 | -8.615850e-47 |
Msa0521670 | Msa1109350 | 0.814001 | 1.924119e-51 | -8.615850e-47 |
Msa0524600 | Msa1109350 | 0.808501 | 3.002914e-50 | -8.615850e-47 |
Msa0527910 | Msa1109350 | 0.810791 | 9.671831e-51 | -8.615850e-47 |
Msa0532980 | Msa1109350 | 0.837900 | 3.955342e-57 | -8.615850e-47 |
Msa0541860 | Msa1109350 | 0.810142 | 1.334912e-50 | -8.615850e-47 |
Msa0544540 | Msa1109350 | 0.802367 | 5.801495e-49 | -8.615850e-47 |
Msa0545060 | Msa1109350 | 0.829412 | 5.221817e-55 | -8.615850e-47 |
Msa0546570 | Msa1109350 | 0.808775 | 2.623572e-50 | -8.615850e-47 |
Msa0547990 | Msa1109350 | 0.810658 | 1.033020e-50 | -8.615850e-47 |
Msa0550540 | Msa1109350 | 0.817741 | 2.817000e-52 | -8.615850e-47 |
Msa0550570 | Msa1109350 | 0.827331 | 1.659422e-54 | -8.615850e-47 |
Msa0556790 | Msa1109350 | 0.857433 | 1.637501e-62 | -8.615850e-47 |
Msa0556860 | Msa1109350 | 0.810089 | 1.370781e-50 | -8.615850e-47 |
Msa0560500 | Msa1109350 | 0.807308 | 5.385482e-50 | -8.615850e-47 |
Msa0576730 | Msa1109350 | 0.813395 | 2.615685e-51 | -8.615850e-47 |
Msa0578090 | Msa1109350 | 0.812332 | 4.471420e-51 | -8.615850e-47 |
Msa0580230 | Msa1109350 | 0.833850 | 4.208123e-56 | -8.615850e-47 |
Msa0581070 | Msa1109350 | 0.807081 | 6.016196e-50 | -8.615850e-47 |
Msa0586850 | Msa1109350 | 0.814345 | 1.615028e-51 | -8.615850e-47 |
Msa0588090 | Msa1109350 | 0.811380 | 7.207103e-51 | -8.615850e-47 |
Msa0600600 | Msa1109350 | 0.845780 | 3.280840e-59 | -8.615850e-47 |
Msa0843120 | Msa1109350 | -0.806855 | 6.717330e-50 | -8.615850e-47 |
Msa0844230 | Msa1109350 | 0.800342 | 1.507247e-48 | -8.615850e-47 |
Msa0846230 | Msa1109350 | 0.868712 | 5.326629e-66 | -8.615850e-47 |
Msa0850710 | Msa1109350 | 0.810450 | 1.145664e-50 | -8.615850e-47 |
Msa0858440 | Msa1109350 | 0.801151 | 1.030999e-48 | -8.615850e-47 |
Msa0859180 | Msa1109350 | 0.804284 | 2.325326e-49 | -8.615850e-47 |
Msa0861470 | Msa1109350 | 0.806110 | 9.642742e-50 | -8.615850e-47 |
Msa0861500 | Msa1109350 | 0.801322 | 9.510558e-49 | -8.615850e-47 |
Msa0861570 | Msa1109350 | 0.806685 | 7.296602e-50 | -8.615850e-47 |
Msa0862500 | Msa1109350 | 0.823928 | 1.063575e-53 | -8.615850e-47 |
Msa0865570 | Msa1109350 | 0.829548 | 4.841304e-55 | -8.615850e-47 |
Msa0879860 | Msa1109350 | 0.823287 | 1.502445e-53 | -8.615850e-47 |
Msa0888940 | Msa1109350 | 0.810724 | 9.998794e-51 | -8.615850e-47 |
Msa0895310 | Msa1109350 | 0.817259 | 3.617982e-52 | -8.615850e-47 |
Msa0897400 | Msa1109350 | 0.810385 | 1.183433e-50 | -8.615850e-47 |
Msa0899350 | Msa1109350 | 0.818040 | 2.412141e-52 | -8.615850e-47 |
Msa0906690 | Msa1109350 | 0.804049 | 2.603460e-49 | -8.615850e-47 |
Msa0922030 | Msa1109350 | 0.803443 | 3.478330e-49 | -8.615850e-47 |
Msa0923780 | Msa1109350 | 0.813947 | 1.977147e-51 | -8.615850e-47 |
Msa0939000 | Msa1109350 | 0.803841 | 2.875700e-49 | -8.615850e-47 |
Msa0943170 | Msa1109350 | 0.802824 | 4.669292e-49 | -8.615850e-47 |
Msa0944200 | Msa1109350 | 0.811370 | 7.243496e-51 | -8.615850e-47 |
Msa0945240 | Msa1109350 | 0.813069 | 3.084298e-51 | -8.615850e-47 |
Msa0957870 | Msa1109350 | 0.804648 | 1.953334e-49 | -8.615850e-47 |
Msa0957970 | Msa1109350 | 0.805546 | 1.266937e-49 | -8.615850e-47 |
Msa0960830 | Msa1109350 | 0.808634 | 2.812140e-50 | -8.615850e-47 |
Msa0962840 | Msa1109350 | 0.805195 | 1.501134e-49 | -8.615850e-47 |
Msa0963020 | Msa1109350 | 0.816564 | 5.183473e-52 | -8.615850e-47 |
Msa0968440 | Msa1109350 | 0.800661 | 1.298161e-48 | -8.615850e-47 |
Msa0974950 | Msa1109350 | 0.802229 | 6.195317e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1109350 | MtrunA17_Chr7g0243261 | 93.529 | 170 | 3 | 1 | 1 | 162 | 1 | 170 | 1.00e-112 | 317 |
Msa1109350 | MtrunA17_Chr4g0005561 | 80.000 | 170 | 26 | 1 | 1 | 162 | 1 | 170 | 3.96e-96 | 275 |
Msa1109350 | MtrunA17_Chr5g0418311 | 47.222 | 180 | 77 | 3 | 1 | 162 | 1 | 180 | 4.92e-54 | 169 |
Msa1109350 | MtrunA17_Chr4g0061181 | 45.402 | 174 | 83 | 3 | 1 | 162 | 1 | 174 | 3.77e-48 | 154 |
Msa1109350 | MtrunA17_Chr7g0269431 | 41.772 | 79 | 44 | 2 | 48 | 125 | 33 | 110 | 4.55e-15 | 68.2 |
Msa1109350 | MtrunA17_Chr1g0195361 | 28.421 | 95 | 66 | 2 | 48 | 141 | 35 | 128 | 1.74e-12 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1109350 | AT3G08890.1 | 75.294 | 170 | 34 | 1 | 1 | 162 | 1 | 170 | 4.75e-95 | 272 |
Msa1109350 | AT3G08890.2 | 75.294 | 170 | 34 | 1 | 1 | 162 | 1 | 170 | 4.75e-95 | 272 |
Msa1109350 | AT5G37070.1 | 74.118 | 170 | 36 | 1 | 1 | 162 | 1 | 170 | 1.05e-91 | 264 |
Msa1109350 | AT5G01610.2 | 68.824 | 170 | 45 | 1 | 1 | 162 | 1 | 170 | 2.83e-87 | 253 |
Msa1109350 | AT5G01610.1 | 68.824 | 170 | 45 | 1 | 1 | 162 | 1 | 170 | 2.83e-87 | 253 |
Msa1109350 | AT2G03350.1 | 47.619 | 168 | 76 | 3 | 7 | 162 | 12 | 179 | 3.33e-48 | 154 |
Msa1109350 | AT1G02816.1 | 28.696 | 115 | 79 | 2 | 49 | 160 | 35 | 149 | 1.55e-14 | 67.8 |
Msa1109350 | AT4G02360.1 | 31.068 | 103 | 69 | 2 | 48 | 149 | 31 | 132 | 4.50e-13 | 63.5 |
Msa1109350 | AT4G02370.1 | 30.526 | 95 | 65 | 1 | 48 | 141 | 34 | 128 | 5.25e-13 | 63.5 |
Find 47 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGCTTCACAACTACTGTTTC+TGG | 0.191177 | 7_3:-52840133 | Msa1109350:CDS |
AGAAGAGTGGTTGGTGAATC+TGG | 0.237015 | 7_3:-52842633 | Msa1109350:five_prime_UTR |
TGGCTCGTCAACAAATTAAA+AGG | 0.258287 | 7_3:-52840694 | Msa1109350:intron |
TGAACAAGGTTGGATCTTAC+TGG | 0.286424 | 7_3:-52842593 | Msa1109350:CDS |
AACTACTGTTTCTGGTTACT+TGG | 0.322844 | 7_3:-52840125 | Msa1109350:CDS |
AGGAAAGCTAGCTGATATAG+AGG | 0.343413 | 7_3:-52840098 | Msa1109350:CDS |
CTCATAGTTTGTTGCGTCGC+GGG | 0.350732 | 7_3:+52840234 | None:intergenic |
TAATTTGTTGACGAGCCATT+TGG | 0.400342 | 7_3:+52840699 | None:intergenic |
GACAGAGTTGAGTTCCTTGT+TGG | 0.400423 | 7_3:+52842557 | None:intergenic |
CCAGCAGTGAAGTGCAGCTT+TGG | 0.409039 | 7_3:+52840019 | None:intergenic |
CTTTGGTCCCTCGGATGTAA+TGG | 0.437677 | 7_3:+52840036 | None:intergenic |
GTTTCTGGTTACTTGGAGAA+AGG | 0.453263 | 7_3:-52840118 | Msa1109350:CDS |
GCATGAAGAAAACAAGGAAA+AGG | 0.453741 | 7_3:-52839997 | Msa1109350:CDS |
TTATATTTATACATTTAGAA+TGG | 0.463251 | 7_3:-52842705 | Msa1109350:five_prime_UTR |
CCAAAGCTGCACTTCACTGC+TGG | 0.476094 | 7_3:-52840019 | Msa1109350:CDS |
GTAGAGAGAAGAAGAGTGGT+TGG | 0.485096 | 7_3:-52842642 | Msa1109350:five_prime_UTR |
TCGCGGGGAAAGATTCCTAT+TGG | 0.487217 | 7_3:+52840250 | None:intergenic |
TCACTGTCAAGCAGCATTGA+AGG | 0.491753 | 7_3:-52840727 | Msa1109350:CDS |
AAGGAGTATGATCTACCAAT+AGG | 0.492134 | 7_3:-52840265 | Msa1109350:CDS |
ATTCCTCAAGTGTGTGAAGT+AGG | 0.513172 | 7_3:-52840178 | Msa1109350:CDS |
GGTTGGTGAATCTGGGTGAA+TGG | 0.514189 | 7_3:-52842625 | Msa1109350:exon |
GAAGTGCAGCTTTGGTCCCT+CGG | 0.517935 | 7_3:+52840027 | None:intergenic |
GAAGAGTGGTTGGTGAATCT+GGG | 0.518190 | 7_3:-52842632 | Msa1109350:five_prime_UTR |
CATGAAGAAAACAAGGAAAA+GGG | 0.522722 | 7_3:-52839996 | Msa1109350:CDS |
TTTCACCCACACCAACACTT+TGG | 0.523358 | 7_3:+52840066 | None:intergenic |
GATCAGGTATTGAACAAGGT+TGG | 0.526839 | 7_3:-52842603 | Msa1109350:CDS |
TGAATCTGGGTGAATGGATC+AGG | 0.543188 | 7_3:-52842619 | Msa1109350:exon |
TCATAGTTTGTTGCGTCGCG+GGG | 0.545453 | 7_3:+52840235 | None:intergenic |
CTGCTGGCATGAAGAAAACA+AGG | 0.556882 | 7_3:-52840003 | Msa1109350:CDS |
GCATATGAAGTTTCTAGAGA+TGG | 0.564091 | 7_3:-52839971 | Msa1109350:CDS |
GGAAAGCTAGCTGATATAGA+GGG | 0.565162 | 7_3:-52840097 | Msa1109350:CDS |
TTTCGTAGAGAGAAGAAGAG+TGG | 0.588907 | 7_3:-52842646 | Msa1109350:five_prime_UTR |
ACTCATAGTTTGTTGCGTCG+CGG | 0.599993 | 7_3:+52840233 | None:intergenic |
ACTCTTCTTCTCTCTACGAA+AGG | 0.603991 | 7_3:+52842648 | None:intergenic |
AATAATTAAGAATAAGCCCA+TGG | 0.608034 | 7_3:-52842757 | None:intergenic |
TGAAGACCAAAGTGTTGGTG+TGG | 0.610783 | 7_3:-52840072 | Msa1109350:CDS |
GGGAATGAAGACCAAAGTGT+TGG | 0.613612 | 7_3:-52840077 | Msa1109350:CDS |
AACAAGGAACTCAACTCTGT+CGG | 0.617344 | 7_3:-52842555 | Msa1109350:CDS |
GTTCAGCAAGAAAGCCAACA+AGG | 0.625594 | 7_3:-52842571 | Msa1109350:CDS |
TAGCCTACTTCACACACTTG+AGG | 0.632117 | 7_3:+52840175 | None:intergenic |
GCCATTAACAGAGTTGCTGA+AGG | 0.634031 | 7_3:-52840284 | Msa1109350:intron |
GCATTGAAGGAGGAACCAAA+TGG | 0.635369 | 7_3:-52840714 | Msa1109350:CDS |
CTGTCAAGCAGCATTGAAGG+AGG | 0.660543 | 7_3:-52840724 | Msa1109350:CDS |
AGTTACCGCCATTACATCCG+AGG | 0.662266 | 7_3:-52840044 | Msa1109350:CDS |
AATGGATCAGGTATTGAACA+AGG | 0.667362 | 7_3:-52842607 | Msa1109350:CDS |
GTTACCGCCATTACATCCGA+GGG | 0.676710 | 7_3:-52840043 | Msa1109350:CDS |
GAAGACCAAAGTGTTGGTGT+GGG | 0.680068 | 7_3:-52840071 | Msa1109350:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATATTTATACATTTAGAA+TGG | - | chr7_3:52839996-52840015 | Msa1109350:CDS | 10.0% |
!! | ATAATAAAAAAGAGTAAAAA+GGG | + | chr7_3:52840218-52840237 | None:intergenic | 10.0% |
!! | AATAATAAAAAAGAGTAAAA+AGG | + | chr7_3:52840219-52840238 | None:intergenic | 10.0% |
!! | TAGATTATTTAATGATTATT+TGG | - | chr7_3:52840555-52840574 | Msa1109350:intron | 10.0% |
!!! | ATAAATAAATAAAAGTTTTG+GGG | - | chr7_3:52840742-52840761 | Msa1109350:intron | 10.0% |
!! | TAATAAAAAAGAGTAAAAAG+GGG | + | chr7_3:52840217-52840236 | None:intergenic | 15.0% |
!!! | TAAATAAATAAAAGTTTTGG+GGG | - | chr7_3:52840743-52840762 | Msa1109350:intron | 15.0% |
!! | TAAATATTCTACTTTGATTA+AGG | - | chr7_3:52842116-52842135 | Msa1109350:intron | 15.0% |
!! | AATAAAGATAATATAAGCTA+TGG | - | chr7_3:52842216-52842235 | Msa1109350:intron | 15.0% |
!! | AATAAAAAAGAGTAAAAAGG+GGG | + | chr7_3:52840216-52840235 | None:intergenic | 20.0% |
!! | AAGTATTCAACTAAAAAAAG+AGG | + | chr7_3:52840265-52840284 | None:intergenic | 20.0% |
!!! | TATTTGTCGAATTTTAAATC+TGG | - | chr7_3:52840469-52840488 | Msa1109350:intron | 20.0% |
!!! | AATTTTTCATGCATAATATG+TGG | - | chr7_3:52841386-52841405 | Msa1109350:intron | 20.0% |
!!! | ATTTTTCATGCATAATATGT+GGG | - | chr7_3:52841387-52841406 | Msa1109350:intron | 20.0% |
!! | AATTAAACTGTATCTAAACA+GGG | + | chr7_3:52842142-52842161 | None:intergenic | 20.0% |
!! | TAATTAAACTGTATCTAAAC+AGG | + | chr7_3:52842143-52842162 | None:intergenic | 20.0% |
!!! | ACTTAATTGAACTTATTTTC+TGG | + | chr7_3:52842329-52842348 | None:intergenic | 20.0% |
! | ATAAAAAAGAGTAAAAAGGG+GGG | + | chr7_3:52840215-52840234 | None:intergenic | 25.0% |
!!! | TGATAATGACAATGACATTT+TGG | - | chr7_3:52840815-52840834 | Msa1109350:intron | 25.0% |
! | ACTCATAAAAAGATTGATCA+AGG | + | chr7_3:52841110-52841129 | None:intergenic | 25.0% |
! | CAGATTGATTATTTAATGTC+AGG | + | chr7_3:52841487-52841506 | None:intergenic | 25.0% |
! | ATATATCAATCTATAGACAC+AGG | + | chr7_3:52841553-52841572 | None:intergenic | 25.0% |
! | ATTTGTCCATTTATCTTTAC+TGG | - | chr7_3:52841664-52841683 | Msa1109350:intron | 25.0% |
! | ATTTCTTTGATCTGAATATG+AGG | - | chr7_3:52841788-52841807 | Msa1109350:intron | 25.0% |
! | TTTCTTTGATCTGAATATGA+GGG | - | chr7_3:52841789-52841808 | Msa1109350:intron | 25.0% |
! | TTTATCCCATTTACTGATAA+TGG | - | chr7_3:52841834-52841853 | Msa1109350:intron | 25.0% |
! | GATTTCCATTATCAGTAAAT+GGG | + | chr7_3:52841842-52841861 | None:intergenic | 25.0% |
! | TGATTTCCATTATCAGTAAA+TGG | + | chr7_3:52841843-52841862 | None:intergenic | 25.0% |
! | TTATATTAACACTCTTCCTT+TGG | - | chr7_3:52841942-52841961 | Msa1109350:intron | 25.0% |
!!! | ACTAATCTTTTTCAGACCAT+GGG | + | chr7_3:52839963-52839982 | None:intergenic | 30.0% |
TAAGAATCATAAGCAAGACA+TGG | + | chr7_3:52840304-52840323 | None:intergenic | 30.0% | |
!! | CTCAGCTATCTGATTTTAAT+TGG | - | chr7_3:52840425-52840444 | Msa1109350:intron | 30.0% |
!!! | AATGACATTTTGGTTGTGAT+CGG | - | chr7_3:52840825-52840844 | Msa1109350:intron | 30.0% |
CTGGCACATAAACATTAATT+GGG | + | chr7_3:52840928-52840947 | None:intergenic | 30.0% | |
!! | CATAAACATGTGAAGCATTT+TGG | - | chr7_3:52840981-52841000 | Msa1109350:intron | 30.0% |
!!! | TGTGAAGCATTTTGGTTTAT+CGG | - | chr7_3:52840989-52841008 | Msa1109350:intron | 30.0% |
!!! | GCATGAATTCTAGAATGTTT+TGG | - | chr7_3:52841038-52841057 | Msa1109350:intron | 30.0% |
!! | GTAAAAGTATTAAGTAGTGC+TGG | - | chr7_3:52841141-52841160 | Msa1109350:intron | 30.0% |
GGGTTTAGTGAATAGAAATT+AGG | - | chr7_3:52841407-52841426 | Msa1109350:intron | 30.0% | |
AATAGAAATTAGGAAGCCTA+AGG | - | chr7_3:52841417-52841436 | Msa1109350:intron | 30.0% | |
AAAGTCTCACATTTATCCTT+AGG | + | chr7_3:52841436-52841455 | None:intergenic | 30.0% | |
TAAGGATAAATGTGAGACTT+TGG | - | chr7_3:52841435-52841454 | Msa1109350:intron | 30.0% | |
AACTGTCCAGTAAAGATAAA+TGG | + | chr7_3:52841673-52841692 | None:intergenic | 30.0% | |
!! | TTGAAACTTTTCGCTTTGTT+TGG | - | chr7_3:52841691-52841710 | Msa1109350:intron | 30.0% |
!!! | TGAAACTTTTCGCTTTGTTT+GGG | - | chr7_3:52841692-52841711 | Msa1109350:intron | 30.0% |
! | CTTTGTTTGGGAAAATATGT+TGG | - | chr7_3:52841704-52841723 | Msa1109350:intron | 30.0% |
TAATGACTTAACAATTGCCT+TGG | - | chr7_3:52841732-52841751 | Msa1109350:intron | 30.0% | |
AACAAAGAACTAGAAAACCA+AGG | + | chr7_3:52841752-52841771 | None:intergenic | 30.0% | |
!!! | TTGGTTTTCTAGTTCTTTGT+TGG | - | chr7_3:52841751-52841770 | Msa1109350:intron | 30.0% |
AAATCATTTGTGAGTCTTGA+GGG | - | chr7_3:52841857-52841876 | Msa1109350:intron | 30.0% | |
! | TTCAACATTTGCTAGTCTAA+TGG | + | chr7_3:52841894-52841913 | None:intergenic | 30.0% |
ACAGTGACTAAAAAAACCAA+AGG | + | chr7_3:52841961-52841980 | None:intergenic | 30.0% | |
! | TTTTTCTGTGTTTCTCAATC+AGG | - | chr7_3:52842052-52842071 | Msa1109350:intron | 30.0% |
!!! | ATGTCGTAAGCTATTTTTGT+TGG | - | chr7_3:52842273-52842292 | Msa1109350:intron | 30.0% |
CATGTTAGAGGGTAAAATTA+AGG | + | chr7_3:52842365-52842384 | None:intergenic | 30.0% | |
! | CTTAATTTTACCCTCTAACA+TGG | - | chr7_3:52842363-52842382 | Msa1109350:intron | 30.0% |
CATGAAGAAAACAAGGAAAA+GGG | - | chr7_3:52842705-52842724 | Msa1109350:five_prime_UTR | 30.0% | |
!!! | GACTAATCTTTTTCAGACCA+TGG | + | chr7_3:52839964-52839983 | None:intergenic | 35.0% |
!! | AATGGATCAGGTATTGAACA+AGG | - | chr7_3:52840094-52840113 | Msa1109350:CDS | 35.0% |
ACACATACATGCATGTACTT+TGG | - | chr7_3:52840380-52840399 | Msa1109350:intron | 35.0% | |
CACATACATGCATGTACTTT+GGG | - | chr7_3:52840381-52840400 | Msa1109350:intron | 35.0% | |
ATTCTCTTCACAAAGGAAGT+CGG | + | chr7_3:52840496-52840515 | None:intergenic | 35.0% | |
TTGAGATCGTACAACCAAAT+TGG | + | chr7_3:52840525-52840544 | None:intergenic | 35.0% | |
! | TGAGTCGAGATATGTTCTTT+TGG | - | chr7_3:52840662-52840681 | Msa1109350:intron | 35.0% |
! | GAGTCGAGATATGTTCTTTT+GGG | - | chr7_3:52840663-52840682 | Msa1109350:intron | 35.0% |
CCAAGTAAGTTTCATATCCA+GGG | + | chr7_3:52840694-52840713 | None:intergenic | 35.0% | |
TCCAAGTAAGTTTCATATCC+AGG | + | chr7_3:52840695-52840714 | None:intergenic | 35.0% | |
!!! | ATGACATTTTGGTTGTGATC+GGG | - | chr7_3:52840826-52840845 | Msa1109350:intron | 35.0% |
TAAAGTCACATGATGCACAA+AGG | + | chr7_3:52840888-52840907 | None:intergenic | 35.0% | |
CCTGGCACATAAACATTAAT+TGG | + | chr7_3:52840929-52840948 | None:intergenic | 35.0% | |
CCAATTAATGTTTATGTGCC+AGG | - | chr7_3:52840926-52840945 | Msa1109350:intron | 35.0% | |
GATTGGTAGGCTTAAAAACT+TGG | + | chr7_3:52840955-52840974 | None:intergenic | 35.0% | |
! | TTTTAAGCCTACCAATCTAC+CGG | - | chr7_3:52840958-52840977 | Msa1109350:intron | 35.0% |
AATGCTTCACATGTTTATGC+CGG | + | chr7_3:52840980-52840999 | None:intergenic | 35.0% | |
! | TGGTTTGTGTATCAGTAAAG+AGG | - | chr7_3:52841058-52841077 | Msa1109350:intron | 35.0% |
GGTTTGTGTATCAGTAAAGA+GGG | - | chr7_3:52841059-52841078 | Msa1109350:intron | 35.0% | |
GTTTGTGTATCAGTAAAGAG+GGG | - | chr7_3:52841060-52841079 | Msa1109350:intron | 35.0% | |
TCAGAAGAGAAATACAGTCA+CGG | + | chr7_3:52841170-52841189 | None:intergenic | 35.0% | |
CTACATATGAGTTTACCAGT+AGG | - | chr7_3:52841193-52841212 | Msa1109350:intron | 35.0% | |
GTATTCAACATGGGAAATCA+AGG | + | chr7_3:52841223-52841242 | None:intergenic | 35.0% | |
GATTTCCCATGTTGAATACT+TGG | - | chr7_3:52841224-52841243 | Msa1109350:intron | 35.0% | |
GAACACCAAGTATTCAACAT+GGG | + | chr7_3:52841232-52841251 | None:intergenic | 35.0% | |
AGAACACCAAGTATTCAACA+TGG | + | chr7_3:52841233-52841252 | None:intergenic | 35.0% | |
!!! | GTTTATTTTGCCTCTGTTGT+AGG | - | chr7_3:52841291-52841310 | Msa1109350:intron | 35.0% |
TAAATGGACAAATACCTCTC+CGG | + | chr7_3:52841657-52841676 | None:intergenic | 35.0% | |
TTTGATCTGAATATGAGGGA+AGG | - | chr7_3:52841793-52841812 | Msa1109350:intron | 35.0% | |
GAAATCATTTGTGAGTCTTG+AGG | - | chr7_3:52841856-52841875 | Msa1109350:intron | 35.0% | |
!! | TAATTTGTTGACGAGCCATT+TGG | + | chr7_3:52842005-52842024 | None:intergenic | 35.0% |
TGGCTCGTCAACAAATTAAA+AGG | - | chr7_3:52842007-52842026 | Msa1109350:intron | 35.0% | |
! | TTTTACCCTCTAACATGGTA+AGG | - | chr7_3:52842368-52842387 | Msa1109350:intron | 35.0% |
TGATACCTTACCATGTTAGA+GGG | + | chr7_3:52842376-52842395 | None:intergenic | 35.0% | |
ATGATACCTTACCATGTTAG+AGG | + | chr7_3:52842377-52842396 | None:intergenic | 35.0% | |
!! | ATGGTAAGGTATCATTTTGC+AGG | - | chr7_3:52842382-52842401 | Msa1109350:intron | 35.0% |
! | AAGGAGTATGATCTACCAAT+AGG | - | chr7_3:52842436-52842455 | Msa1109350:intron | 35.0% |
!! | AACTACTGTTTCTGGTTACT+TGG | - | chr7_3:52842576-52842595 | Msa1109350:CDS | 35.0% |
GCATGAAGAAAACAAGGAAA+AGG | - | chr7_3:52842704-52842723 | Msa1109350:five_prime_UTR | 35.0% | |
! | GCATATGAAGTTTCTAGAGA+TGG | - | chr7_3:52842730-52842749 | Msa1109350:five_prime_UTR | 35.0% |
ACTCTTCTTCTCTCTACGAA+AGG | + | chr7_3:52840056-52840075 | None:intergenic | 40.0% | |
TTTCGTAGAGAGAAGAAGAG+TGG | - | chr7_3:52840055-52840074 | Msa1109350:CDS | 40.0% | |
!! | GATCAGGTATTGAACAAGGT+TGG | - | chr7_3:52840098-52840117 | Msa1109350:CDS | 40.0% |
TGAACAAGGTTGGATCTTAC+TGG | - | chr7_3:52840108-52840127 | Msa1109350:CDS | 40.0% | |
AACAAGGAACTCAACTCTGT+CGG | - | chr7_3:52840146-52840165 | Msa1109350:CDS | 40.0% | |
TTCCTTTGTGAAGAGAATCC+AGG | - | chr7_3:52840498-52840517 | Msa1109350:intron | 40.0% | |
AAGAGAATCCAGGACCAATT+TGG | - | chr7_3:52840508-52840527 | Msa1109350:intron | 40.0% | |
! | GTCGATTGATTTCGAATCGA+TGG | - | chr7_3:52840595-52840614 | Msa1109350:intron | 40.0% |
CCCTGGATATGAAACTTACT+TGG | - | chr7_3:52840691-52840710 | Msa1109350:intron | 40.0% | |
TGGGGGAGAACTGTAAAATT+CGG | - | chr7_3:52840760-52840779 | Msa1109350:intron | 40.0% | |
TGTGCATCATGTGACTTTAG+AGG | - | chr7_3:52840889-52840908 | Msa1109350:intron | 40.0% | |
GGCTTAAAAACTTGGATTCC+TGG | + | chr7_3:52840947-52840966 | None:intergenic | 40.0% | |
ACATGTTTATGCCGGTAGAT+TGG | + | chr7_3:52840972-52840991 | None:intergenic | 40.0% | |
TTGCCTCTGTTGTAGGATAT+TGG | - | chr7_3:52841298-52841317 | Msa1109350:intron | 40.0% | |
ACTCCAATATCCTACAACAG+AGG | + | chr7_3:52841304-52841323 | None:intergenic | 40.0% | |
TAAATGTGAGACTTTGGCGT+TGG | - | chr7_3:52841441-52841460 | Msa1109350:intron | 40.0% | |
AAATGTGAGACTTTGGCGTT+GGG | - | chr7_3:52841442-52841461 | Msa1109350:intron | 40.0% | |
!!! | ATCAATTTTGAAGCTGACGC+CGG | - | chr7_3:52841635-52841654 | Msa1109350:intron | 40.0% |
TCCTTCAGCAACTCTGTTAA+TGG | + | chr7_3:52842421-52842440 | None:intergenic | 40.0% | |
ATTCCTCAAGTGTGTGAAGT+AGG | - | chr7_3:52842523-52842542 | Msa1109350:intron | 40.0% | |
!! | GTTTCTGGTTACTTGGAGAA+AGG | - | chr7_3:52842583-52842602 | Msa1109350:CDS | 40.0% |
AGGAAAGCTAGCTGATATAG+AGG | - | chr7_3:52842603-52842622 | Msa1109350:CDS | 40.0% | |
GGAAAGCTAGCTGATATAGA+GGG | - | chr7_3:52842604-52842623 | Msa1109350:CDS | 40.0% | |
GTAGAGAGAAGAAGAGTGGT+TGG | - | chr7_3:52840059-52840078 | Msa1109350:CDS | 45.0% | |
!! | AGAAGAGTGGTTGGTGAATC+TGG | - | chr7_3:52840068-52840087 | Msa1109350:CDS | 45.0% |
!! | GAAGAGTGGTTGGTGAATCT+GGG | - | chr7_3:52840069-52840088 | Msa1109350:CDS | 45.0% |
TGAATCTGGGTGAATGGATC+AGG | - | chr7_3:52840082-52840101 | Msa1109350:CDS | 45.0% | |
GTTCAGCAAGAAAGCCAACA+AGG | - | chr7_3:52840130-52840149 | Msa1109350:CDS | 45.0% | |
GACAGAGTTGAGTTCCTTGT+TGG | + | chr7_3:52840147-52840166 | None:intergenic | 45.0% | |
GTCCTGGATTCTCTTCACAA+AGG | + | chr7_3:52840503-52840522 | None:intergenic | 45.0% | |
TCGTACAACCAAATTGGTCC+TGG | + | chr7_3:52840519-52840538 | None:intergenic | 45.0% | |
!!! | TGTTCTTTTGGGATTCTCCC+TGG | - | chr7_3:52840674-52840693 | Msa1109350:intron | 45.0% |
!!! | ACATTTTGGTTGTGATCGGG+AGG | - | chr7_3:52840829-52840848 | Msa1109350:intron | 45.0% |
!!! | CATTTTGGTTGTGATCGGGA+GGG | - | chr7_3:52840830-52840849 | Msa1109350:intron | 45.0% |
!!! | ATTTTGGTTGTGATCGGGAG+GGG | - | chr7_3:52840831-52840850 | Msa1109350:intron | 45.0% |
GGCGGTGTAACTAGTAAACT+AGG | - | chr7_3:52840854-52840873 | Msa1109350:intron | 45.0% | |
GTTTATGCCGGTAGATTGGT+AGG | + | chr7_3:52840968-52840987 | None:intergenic | 45.0% | |
GGTGACAGCTTGATTCCAAA+GGG | + | chr7_3:52841089-52841108 | None:intergenic | 45.0% | |
AGGTGACAGCTTGATTCCAA+AGG | + | chr7_3:52841090-52841109 | None:intergenic | 45.0% | |
GGAAATCAAGGAAAGCCTAC+TGG | + | chr7_3:52841211-52841230 | None:intergenic | 45.0% | |
! | TCACTGTCAAGCAGCATTGA+AGG | - | chr7_3:52841974-52841993 | Msa1109350:intron | 45.0% |
GCATTGAAGGAGGAACCAAA+TGG | - | chr7_3:52841987-52842006 | Msa1109350:intron | 45.0% | |
GCCATTAACAGAGTTGCTGA+AGG | - | chr7_3:52842417-52842436 | Msa1109350:intron | 45.0% | |
!! | ACTCATAGTTTGTTGCGTCG+CGG | + | chr7_3:52842471-52842490 | None:intergenic | 45.0% |
TAGCCTACTTCACACACTTG+AGG | + | chr7_3:52842529-52842548 | None:intergenic | 45.0% | |
CGCTTCACAACTACTGTTTC+TGG | - | chr7_3:52842568-52842587 | Msa1109350:CDS | 45.0% | |
GGGAATGAAGACCAAAGTGT+TGG | - | chr7_3:52842624-52842643 | Msa1109350:exon | 45.0% | |
!! | TGAAGACCAAAGTGTTGGTG+TGG | - | chr7_3:52842629-52842648 | Msa1109350:five_prime_UTR | 45.0% |
!! | GAAGACCAAAGTGTTGGTGT+GGG | - | chr7_3:52842630-52842649 | Msa1109350:five_prime_UTR | 45.0% |
TTTCACCCACACCAACACTT+TGG | + | chr7_3:52842638-52842657 | None:intergenic | 45.0% | |
CTGCTGGCATGAAGAAAACA+AGG | - | chr7_3:52842698-52842717 | Msa1109350:five_prime_UTR | 45.0% | |
!! | TATTTATTTATAAAAAAACA+CGG | + | chr7_3:52840733-52840752 | None:intergenic | 5.0% |
!!! | TTATAAATAAATAAAAGTTT+TGG | - | chr7_3:52840740-52840759 | Msa1109350:intron | 5.0% |
!!! | TATAAATAAATAAAAGTTTT+GGG | - | chr7_3:52840741-52840760 | Msa1109350:intron | 5.0% |
!! | GGTTGGTGAATCTGGGTGAA+TGG | - | chr7_3:52840076-52840095 | Msa1109350:CDS | 50.0% |
! | AAAAGGGGGGTGTAGCAGTA+GGG | + | chr7_3:52840202-52840221 | None:intergenic | 50.0% |
! | AAAAAGGGGGGTGTAGCAGT+AGG | + | chr7_3:52840203-52840222 | None:intergenic | 50.0% |
!! | TTTTGGTTGTGATCGGGAGG+GGG | - | chr7_3:52840832-52840851 | Msa1109350:intron | 50.0% |
AGTAAAGAGGGGCTACCCTT+TGG | - | chr7_3:52841071-52841090 | Msa1109350:intron | 50.0% | |
! | CTGTCAAGCAGCATTGAAGG+AGG | - | chr7_3:52841977-52841996 | Msa1109350:intron | 50.0% |
TCGCGGGGAAAGATTCCTAT+TGG | + | chr7_3:52842454-52842473 | None:intergenic | 50.0% | |
!! | TCATAGTTTGTTGCGTCGCG+GGG | + | chr7_3:52842469-52842488 | None:intergenic | 50.0% |
!! | CTCATAGTTTGTTGCGTCGC+GGG | + | chr7_3:52842470-52842489 | None:intergenic | 50.0% |
AGTTACCGCCATTACATCCG+AGG | - | chr7_3:52842657-52842676 | Msa1109350:five_prime_UTR | 50.0% | |
GTTACCGCCATTACATCCGA+GGG | - | chr7_3:52842658-52842677 | Msa1109350:five_prime_UTR | 50.0% | |
CTTTGGTCCCTCGGATGTAA+TGG | + | chr7_3:52842668-52842687 | None:intergenic | 50.0% | |
TTTGGTTGTGATCGGGAGGG+GGG | - | chr7_3:52840833-52840852 | Msa1109350:intron | 55.0% | |
! | TGGCGTTGGGCACAGGATTA+TGG | - | chr7_3:52841455-52841474 | Msa1109350:intron | 55.0% |
!!! | TTTTGAAGCTGACGCCGGAG+AGG | - | chr7_3:52841640-52841659 | Msa1109350:intron | 55.0% |
TGGTCCCTCGGATGTAATGG+CGG | + | chr7_3:52842665-52842684 | None:intergenic | 55.0% | |
! | GAAGTGCAGCTTTGGTCCCT+CGG | + | chr7_3:52842677-52842696 | None:intergenic | 55.0% |
CCAGCAGTGAAGTGCAGCTT+TGG | + | chr7_3:52842685-52842704 | None:intergenic | 55.0% | |
CCAAAGCTGCACTTCACTGC+TGG | - | chr7_3:52842682-52842701 | Msa1109350:five_prime_UTR | 55.0% | |
! | GAGACTTTGGCGTTGGGCAC+AGG | - | chr7_3:52841448-52841467 | Msa1109350:intron | 60.0% |
GGTTGTGATCGGGAGGGGGG+CGG | - | chr7_3:52840836-52840855 | Msa1109350:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 52839949 | 52842774 | 52839949 | ID=Msa1109350;Name=Msa1109350 |
chr7_3 | mRNA | 52839949 | 52842774 | 52839949 | ID=Msa1109350-mRNA-1;Parent=Msa1109350;Name=Msa1109350-mRNA-1;_AED=0.11;_eAED=0.12;_QI=146|0.5|0.66|1|1|1|3|0|162 |
chr7_3 | exon | 52839949 | 52840295 | 52839949 | ID=Msa1109350-mRNA-1:exon:11130;Parent=Msa1109350-mRNA-1 |
chr7_3 | exon | 52840695 | 52840749 | 52840695 | ID=Msa1109350-mRNA-1:exon:11129;Parent=Msa1109350-mRNA-1 |
chr7_3 | exon | 52842542 | 52842774 | 52842542 | ID=Msa1109350-mRNA-1:exon:11128;Parent=Msa1109350-mRNA-1 |
chr7_3 | five_prime_UTR | 52842629 | 52842774 | 52842629 | ID=Msa1109350-mRNA-1:five_prime_utr;Parent=Msa1109350-mRNA-1 |
chr7_3 | CDS | 52842542 | 52842628 | 52842542 | ID=Msa1109350-mRNA-1:cds;Parent=Msa1109350-mRNA-1 |
chr7_3 | CDS | 52840695 | 52840749 | 52840695 | ID=Msa1109350-mRNA-1:cds;Parent=Msa1109350-mRNA-1 |
chr7_3 | CDS | 52839949 | 52840295 | 52839949 | ID=Msa1109350-mRNA-1:cds;Parent=Msa1109350-mRNA-1 |
Gene Sequence |
Protein sequence |