AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0168190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0168190 MtrunA17_Chr2g0318541 87.879 66 8 0 34 99 498 563 1.53e-30 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 137 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTAGTTACTATCATATTT+AGG 0.140806 1_4:-50523063 Msa0168190:three_prime_UTR
CCTGAATGACATTGATATTC+TGG 0.189504 1_4:+50523547 None:intergenic
ATCATCATCATAACTGTTAA+TGG 0.198865 1_4:-50524538 Msa0168190:three_prime_UTR
AAGAACAGTATACATGTAAA+TGG 0.205118 1_4:+50522814 None:intergenic
TGGGCACTTTAGGGGCATTT+TGG 0.228149 1_4:-50526773 Msa0168190:five_prime_UTR
ATTAGTTACTATCATATTTA+GGG 0.265584 1_4:-50523062 Msa0168190:three_prime_UTR
TTCTAAAGACTGGTATGTTT+TGG 0.266573 1_4:+50526603 None:intergenic
TGCACTTTGTTGAATTGTTT+TGG 0.271540 1_4:-50523017 Msa0168190:three_prime_UTR
TCCAATTGATGAAATTTCTT+TGG 0.273796 1_4:-50526745 Msa0168190:five_prime_UTR
TTACTAGCTTAAGACATAAA+TGG 0.278661 1_4:-50524017 Msa0168190:three_prime_UTR
ATTAAGGCTTGGTTTCATTA+AGG 0.279842 1_4:-50525412 Msa0168190:intron
CAAATTCGATTTACTGTTCA+TGG 0.283346 1_4:+50526577 None:intergenic
GAAGAACAATACTTTGCTTT+TGG 0.289019 1_4:-50523211 Msa0168190:three_prime_UTR
GTCATGTAGTGGTGCAGTTT+TGG 0.298095 1_4:-50526388 Msa0168190:five_prime_UTR
ACCAAAGAAATTTCATCAAT+TGG 0.303256 1_4:+50526744 None:intergenic
CCAACGTTCATTGATTATAA+TGG 0.304555 1_4:-50523342 Msa0168190:three_prime_UTR
CCAGAATATCAATGTCATTC+AGG 0.310628 1_4:-50523547 Msa0168190:three_prime_UTR
AGTTGAACTATGCGACATTA+AGG 0.318921 1_4:-50525428 Msa0168190:CDS
TAACATTTGGGCTATATATA+TGG 0.319105 1_4:-50526702 Msa0168190:five_prime_UTR
CACGATATTAGTCTTCTCTT+TGG 0.320611 1_4:-50524753 Msa0168190:CDS
TCATTGTTTCCACTAACATT+TGG 0.327584 1_4:-50526715 Msa0168190:five_prime_UTR
CTGAGGATACTGTGTTCTTC+CGG 0.331177 1_4:-50524182 Msa0168190:three_prime_UTR
CATTGTTTCCACTAACATTT+GGG 0.340935 1_4:-50526714 Msa0168190:five_prime_UTR
AAGTCTCTGGTATGTAAAAT+TGG 0.342123 1_4:-50524375 Msa0168190:three_prime_UTR
TCTAATTCTTGCTGTTACTA+AGG 0.349277 1_4:-50524301 Msa0168190:three_prime_UTR
TAGAGCTGGGTGCCTGGATT+TGG 0.361184 1_4:-50523458 Msa0168190:three_prime_UTR
TTCTGAGATTGGTTTGAGTT+GGG 0.378227 1_4:-50526453 Msa0168190:five_prime_UTR
ATGCGATAGGGTTCTGAGAT+TGG 0.378475 1_4:-50526464 Msa0168190:five_prime_UTR
TGAAATTTAAGTGTAGAATC+AGG 0.382944 1_4:-50522876 Msa0168190:three_prime_UTR
TGAGGATACTGTGTTCTTCC+GGG 0.383874 1_4:-50524181 Msa0168190:three_prime_UTR
GTTCTTTGATCTGCTGTTGT+TGG 0.385533 1_4:-50526431 Msa0168190:five_prime_UTR
TCAATGAACGTTGGTGTAGC+TGG 0.388479 1_4:+50523351 None:intergenic
CTGATACATGTATCTCCTAT+TGG 0.389711 1_4:+50523128 None:intergenic
TCCTGTTTGTTATAGCCATA+AGG 0.397282 1_4:+50523409 None:intergenic
TCTTGGTGCTCAGTCCTTTG+AGG 0.398508 1_4:-50525044 Msa0168190:intron
ACAAAATAGAGCTGGGTGCC+TGG 0.399485 1_4:-50523464 Msa0168190:three_prime_UTR
TCTGTGAATAACCATATGAT+TGG 0.408436 1_4:-50524210 Msa0168190:three_prime_UTR
AGACTGGTGTACATCTATAA+TGG 0.409012 1_4:-50524609 Msa0168190:three_prime_UTR
TGAAAATGTGATCACAATCA+TGG 0.410902 1_4:-50525511 Msa0168190:exon
GTTCTGAGATTGGTTTGAGT+TGG 0.411370 1_4:-50526454 Msa0168190:five_prime_UTR
CTGCACTCTCTGAACTAATC+AGG 0.411911 1_4:-50522911 Msa0168190:three_prime_UTR
TGTGTCATGGTTTATTGTAA+TGG 0.412851 1_4:-50522954 Msa0168190:three_prime_UTR
TAATTTATCCTGCTCTTCAC+TGG 0.416641 1_4:+50523081 None:intergenic
TCTCCTATTGGCACCGTCAA+TGG 0.417525 1_4:+50523140 None:intergenic
ATGACATTGATATTCTGGTT+TGG 0.423705 1_4:+50523552 None:intergenic
TATTTAGGGTCATGGTGTGC+AGG 0.430442 1_4:-50523048 Msa0168190:three_prime_UTR
TTTCAAAGCAGAAGTGCAAC+TGG 0.431161 1_4:-50524888 Msa0168190:CDS
ACGCAGCTCCTGCCATGGTC+AGG 0.431291 1_4:-50524498 Msa0168190:three_prime_UTR
TGGCTATAACAAACAGGAAA+GGG 0.435466 1_4:-50523404 Msa0168190:three_prime_UTR
ATTTATGAGCGTTATGAGAC+TGG 0.439540 1_4:-50524625 Msa0168190:three_prime_UTR
AGTGAATTGTGAAGATTCCT+TGG 0.446636 1_4:+50525066 None:intergenic
CCTCAGCTTGCCCAATCATA+TGG 0.450278 1_4:+50524199 None:intergenic
GTATCCGAATCTACTCCTTA+TGG 0.451663 1_4:-50523424 Msa0168190:three_prime_UTR
AGGGTCATGGTGTGCAGGGT+TGG 0.456110 1_4:-50523043 Msa0168190:three_prime_UTR
CCTTTCCGACCTCTAGTGCT+TGG 0.456216 1_4:+50524804 None:intergenic
TCATTTCCTTCTTCAGATTG+TGG 0.458373 1_4:-50526674 Msa0168190:five_prime_UTR
TCATCATCGCTGAAGGAAAC+CGG 0.458878 1_4:+50524855 None:intergenic
ATATATAGCCCAAATGTTAG+TGG 0.459984 1_4:+50526706 None:intergenic
CACAGAAGCCTGACCATGGC+AGG 0.462409 1_4:+50524490 None:intergenic
ATCACTTTCATTGATTATTG+TGG 0.462962 1_4:-50524438 Msa0168190:three_prime_UTR
CAATAGGAGATACATGTATC+AGG 0.463833 1_4:-50523127 Msa0168190:three_prime_UTR
CGCATATGTCAGCCAAATCC+AGG 0.468349 1_4:+50523446 None:intergenic
ATCTATCTGTGATTTGTTCG+TGG 0.469798 1_4:-50524261 Msa0168190:three_prime_UTR
GAATCTTCACAATTCACTCT+TGG 0.470201 1_4:-50525061 Msa0168190:CDS
TCCTTATGGCTATAACAAAC+AGG 0.471089 1_4:-50523410 Msa0168190:three_prime_UTR
TACTATCATATTTAGGGTCA+TGG 0.476367 1_4:-50523056 Msa0168190:three_prime_UTR
TTCATGGGGTTTCTAAAGAC+TGG 0.477011 1_4:+50526593 None:intergenic
AGTCCATTGACGGTGCCAAT+AGG 0.481728 1_4:-50523143 Msa0168190:three_prime_UTR
TTCGCAGAACAAGGCTAGAA+TGG 0.483429 1_4:-50523634 Msa0168190:intron
TTCGTTGTCCAGTGAAGAGC+AGG 0.484634 1_4:-50523089 Msa0168190:three_prime_UTR
CCCCTAAAGTGCCCAAAATG+AGG 0.487598 1_4:+50526781 None:intergenic
TGCAACTGGAGCTGATAGTC+CGG 0.488838 1_4:-50524874 Msa0168190:CDS
GTGTCAGCATGCATTTCCCT+TGG 0.489277 1_4:-50523303 Msa0168190:three_prime_UTR
CTGTGAATAACCATATGATT+GGG 0.489653 1_4:-50524209 Msa0168190:three_prime_UTR
TTTGTTCTAGGAACGTGTTA+AGG 0.492658 1_4:-50525104 Msa0168190:intron
AGAGCAAGACAAAACCTTCC+CGG 0.495380 1_4:+50524163 None:intergenic
AACTATGCGACATTAAGGCT+TGG 0.498825 1_4:-50525423 Msa0168190:CDS
TGCAGCAATAATTCAAAGAC+AGG 0.499476 1_4:+50522929 None:intergenic
AGAACAGTATACATGTAAAT+GGG 0.499738 1_4:+50522815 None:intergenic
AGAGTTCTACAAAATAGAGC+TGG 0.500119 1_4:-50523472 Msa0168190:three_prime_UTR
CGGTTTGCACCAGAACTTGG+TGG 0.505268 1_4:-50524067 Msa0168190:intron
ATTTAGGGTCATGGTGTGCA+GGG 0.511669 1_4:-50523047 Msa0168190:three_prime_UTR
AAATTCGATTTACTGTTCAT+GGG 0.512240 1_4:+50526578 None:intergenic
ATTTGTTGGGTTTACCTCAA+AGG 0.513130 1_4:+50525030 None:intergenic
ACATTCTTTGACAAAACAGT+TGG 0.514565 1_4:+50523611 None:intergenic
GAAAATGTGATCACAATCAT+GGG 0.515424 1_4:-50525510 Msa0168190:exon
TGGAATGGAATTTGTTGGGT+AGG 0.516364 1_4:+50523371 None:intergenic
TGTAAAATTGGAGGTGAGTG+GGG 0.520147 1_4:-50524363 Msa0168190:three_prime_UTR
TGTGCAAGTACACAAGTCTC+TGG 0.520349 1_4:-50524388 Msa0168190:three_prime_UTR
ATAGCCATAAGGAGTAGATT+CGG 0.520589 1_4:+50523420 None:intergenic
TTTATGTCTTAAGCTAGTAA+AGG 0.520978 1_4:+50524020 None:intergenic
ATGTAAAATTGGAGGTGAGT+GGG 0.523440 1_4:-50524364 Msa0168190:three_prime_UTR
TAGCTGGAATGGAATTTGTT+GGG 0.523834 1_4:+50523367 None:intergenic
TGATGATTATTACACTGAAG+TGG 0.528731 1_4:+50523177 None:intergenic
AGTTAGCATACTATCTTCCA+AGG 0.534470 1_4:+50523286 None:intergenic
GTTCGTGGACCATGCGATGA+TGG 0.536080 1_4:-50524246 Msa0168190:three_prime_UTR
GTAGCTGGAATGGAATTTGT+TGG 0.537737 1_4:+50523366 None:intergenic
CTGGACAACGAATGAGATGC+AGG 0.540409 1_4:+50523100 None:intergenic
GAACGTTGGTGTAGCTGGAA+TGG 0.542196 1_4:+50523356 None:intergenic
ATGAAACCACAATCTGAAGA+AGG 0.543903 1_4:+50526668 None:intergenic
GATACTGTGTTCTTCCGGGA+AGG 0.549324 1_4:-50524177 Msa0168190:intron
CTCACATCTCCACTCGCATC+CGG 0.551685 1_4:+50523250 None:intergenic
ACATGTTCACTGTTGTGTCA+TGG 0.552124 1_4:-50522967 Msa0168190:three_prime_UTR
CGATGAACAGTAATGCGATA+GGG 0.553516 1_4:-50526476 Msa0168190:five_prime_UTR
GGAGCGATCTACGCGCTCCA+AGG 0.554334 1_4:-50525083 Msa0168190:CDS
ATGGCTATAACAAACAGGAA+AGG 0.562348 1_4:-50523405 Msa0168190:three_prime_UTR
TTTCAACGCAGCTCCTGCCA+TGG 0.567402 1_4:-50524503 Msa0168190:three_prime_UTR
GGCATCTTCATCATCGCTGA+AGG 0.569407 1_4:+50524848 None:intergenic
TCGATGAACAGTAATGCGAT+AGG 0.572164 1_4:-50526477 Msa0168190:five_prime_UTR
CCCTAAAGTGCCCAAAATGA+GGG 0.576444 1_4:+50526782 None:intergenic
TTCTTGCTGTTACTAAGGAG+AGG 0.577976 1_4:-50524296 Msa0168190:three_prime_UTR
TTATAATGGTGAAACTAGCT+TGG 0.578050 1_4:-50523328 Msa0168190:three_prime_UTR
CTAACTATTATTGATCATGC+CGG 0.578120 1_4:-50523269 Msa0168190:three_prime_UTR
TCTTGCTGTTACTAAGGAGA+GGG 0.578245 1_4:-50524295 Msa0168190:three_prime_UTR
TCTCTGGTATGTAAAATTGG+AGG 0.581652 1_4:-50524372 Msa0168190:three_prime_UTR
GTGCTTGTGAAGTCCATTGA+CGG 0.581942 1_4:-50523153 Msa0168190:three_prime_UTR
AGCTCAAAACCAAGCACTAG+AGG 0.589923 1_4:-50524813 Msa0168190:CDS
TTGATCATGCCGGATGCGAG+TGG 0.596661 1_4:-50523259 Msa0168190:three_prime_UTR
AATTCGATTTACTGTTCATG+GGG 0.602667 1_4:+50526579 None:intergenic
CCATTATAATCAATGAACGT+TGG 0.604275 1_4:+50523342 None:intergenic
CCAAGCACTAGAGGTCGGAA+AGG 0.605138 1_4:-50524804 Msa0168190:CDS
GAGTTCTACAAAATAGAGCT+GGG 0.606882 1_4:-50523471 Msa0168190:three_prime_UTR
AGAAGCTAACAAATCTGCAA+AGG 0.609630 1_4:+50524718 None:intergenic
AAGCACGCAGGTTTGTCGAA+TGG 0.614852 1_4:-50524329 Msa0168190:three_prime_UTR
ACTTGGTGGTGATATTGACT+TGG 0.615160 1_4:-50524053 Msa0168190:three_prime_UTR
GAGTGCTTTGCAAAGCACGC+AGG 0.616754 1_4:-50524341 Msa0168190:three_prime_UTR
TATGTAAAATTGGAGGTGAG+TGG 0.623493 1_4:-50524365 Msa0168190:three_prime_UTR
GGCTATAACAAACAGGAAAG+GGG 0.627042 1_4:-50523403 Msa0168190:three_prime_UTR
TAATGGTGAAACTAGCTTGG+TGG 0.627473 1_4:-50523325 Msa0168190:three_prime_UTR
AGAGAAGACTAATATCGTGA+TGG 0.628417 1_4:+50524757 None:intergenic
AGATACTCTCCATCATCGCA+TGG 0.629329 1_4:+50524237 None:intergenic
CCATATGATTGGGCAAGCTG+AGG 0.633601 1_4:-50524199 Msa0168190:three_prime_UTR
CAAAACCAAGCACTAGAGGT+CGG 0.637760 1_4:-50524809 Msa0168190:CDS
GATTCTTCATAGTCATGTAG+TGG 0.655238 1_4:-50526399 Msa0168190:five_prime_UTR
ATGACACAACAGTGAACATG+TGG 0.658159 1_4:+50522969 None:intergenic
GTTAGCATACTATCTTCCAA+GGG 0.666617 1_4:+50523287 None:intergenic
AAATGTTAGTGGAAACAATG+AGG 0.668704 1_4:+50526717 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTATTATAGTTG+AGG - chr1_4:50523380-50523399 Msa0168190:three_prime_UTR 10.0%
!!! GTCAATTTTTTATTATTTTT+TGG - chr1_4:50525447-50525466 Msa0168190:CDS 10.0%
!!! TTTATTTGTTATTACTATAT+AGG - chr1_4:50525894-50525913 Msa0168190:intron 10.0%
!! ATACATAACAATGATAAAAT+AGG + chr1_4:50523279-50523298 None:intergenic 15.0%
!!! TTATGATCAGAATTATTTTA+TGG - chr1_4:50524415-50524434 Msa0168190:three_prime_UTR 15.0%
!! AATGTATAATATCATTTGTT+GGG + chr1_4:50524566-50524585 None:intergenic 15.0%
!! TGAAAATTATGTAAAAAGAA+AGG - chr1_4:50524605-50524624 Msa0168190:three_prime_UTR 15.0%
!! TTGAAAGAAAGAAAAAAAAA+AGG + chr1_4:50524905-50524924 None:intergenic 15.0%
!! AATTAGTTACTATCATATTT+AGG - chr1_4:50526517-50526536 Msa0168190:five_prime_UTR 15.0%
!! ATTAGTTACTATCATATTTA+GGG - chr1_4:50526518-50526537 Msa0168190:five_prime_UTR 15.0%
!!! AATCAGGTTATTTAAATTTT+TGG - chr1_4:50526720-50526739 Msa0168190:five_prime_UTR 15.0%
!!! TATTTTTCCAGAAATTCTTA+GGG - chr1_4:50523312-50523331 Msa0168190:three_prime_UTR 20.0%
!!! ATTTCTTGGTTTTATTTTGT+TGG - chr1_4:50523408-50523427 Msa0168190:three_prime_UTR 20.0%
!! AGTTTAAAAATATGAGAGAA+AGG - chr1_4:50523463-50523482 Msa0168190:three_prime_UTR 20.0%
!! GTTTAAAAATATGAGAGAAA+GGG - chr1_4:50523464-50523483 Msa0168190:three_prime_UTR 20.0%
!!! TTGTTGTTCTTAGAATAAAA+AGG - chr1_4:50523520-50523539 Msa0168190:three_prime_UTR 20.0%
!!! TTTTCAACTTTTTTTCTTTC+TGG - chr1_4:50523586-50523605 Msa0168190:three_prime_UTR 20.0%
!!! TTTCAACTTTTTTTCTTTCT+GGG - chr1_4:50523587-50523606 Msa0168190:three_prime_UTR 20.0%
!!! TTGAGAATTATTTTGGATTT+TGG - chr1_4:50523723-50523742 Msa0168190:intron 20.0%
!! TCATAAAAAATCTCATATTC+AGG + chr1_4:50523787-50523806 None:intergenic 20.0%
!!! TGAATATGAGATTTTTTATG+AGG - chr1_4:50523786-50523805 Msa0168190:intron 20.0%
!! AGAAATTATGAATTGTTTGT+TGG - chr1_4:50523829-50523848 Msa0168190:intron 20.0%
!! TCAAACAACAGAAAATTAAA+TGG + chr1_4:50523946-50523965 None:intergenic 20.0%
!!! AATGTGTTGTTTTGATAAAA+AGG - chr1_4:50524033-50524052 Msa0168190:three_prime_UTR 20.0%
!!! ATGTGTTGTTTTGATAAAAA+GGG - chr1_4:50524034-50524053 Msa0168190:three_prime_UTR 20.0%
!!! TCATTTTTCAAGCAATTTTA+TGG - chr1_4:50524118-50524137 Msa0168190:intron 20.0%
!! TTGTCATCAGAATTATTTAA+TGG - chr1_4:50524208-50524227 Msa0168190:three_prime_UTR 20.0%
!! CAATGTATAATATCATTTGT+TGG + chr1_4:50524567-50524586 None:intergenic 20.0%
!!! TTATGTAAAAAGAAAGGTTT+TGG - chr1_4:50524611-50524630 Msa0168190:three_prime_UTR 20.0%
!!! TATGTAAAAAGAAAGGTTTT+GGG - chr1_4:50524612-50524631 Msa0168190:three_prime_UTR 20.0%
!!! TGTAATTTGCTTATATGTTT+TGG - chr1_4:50525811-50525830 Msa0168190:intron 20.0%
! TCCAATTGATGAAATTTCTT+TGG - chr1_4:50522835-50522854 Msa0168190:three_prime_UTR 25.0%
! ACCAAAGAAATTTCATCAAT+TGG + chr1_4:50522839-50522858 None:intergenic 25.0%
! TAACATTTGGGCTATATATA+TGG - chr1_4:50522878-50522897 Msa0168190:three_prime_UTR 25.0%
! AAATTCGATTTACTGTTCAT+GGG + chr1_4:50523005-50523024 None:intergenic 25.0%
!! CATGATTTTCAATTGATCAA+AGG + chr1_4:50523234-50523253 None:intergenic 25.0%
!! GTATTTTTCCAGAAATTCTT+AGG - chr1_4:50523311-50523330 Msa0168190:three_prime_UTR 25.0%
! CATAATTCATGTACACAAAA+CGG + chr1_4:50523443-50523462 None:intergenic 25.0%
! TTGTTCTTAGAATAAAAAGG+AGG - chr1_4:50523523-50523542 Msa0168190:three_prime_UTR 25.0%
!!! TTCAACTTTTTTTCTTTCTG+GGG - chr1_4:50523588-50523607 Msa0168190:three_prime_UTR 25.0%
!! TTGTTGTTGAGAATTAAGAA+CGG - chr1_4:50523636-50523655 Msa0168190:intron 25.0%
!! TGCAGAATTGAGAATTATTT+TGG - chr1_4:50523716-50523735 Msa0168190:intron 25.0%
!!! ATTTTGGATTTTGGTTACTT+TGG - chr1_4:50523732-50523751 Msa0168190:intron 25.0%
!!! TGATCGATTTTTAATCTCTT+TGG - chr1_4:50523868-50523887 Msa0168190:intron 25.0%
! AAGAAATAAGCTAAGAATGA+AGG + chr1_4:50524657-50524676 None:intergenic 25.0%
!! TTATTTCTTTATTCCGTACA+GGG - chr1_4:50524668-50524687 Msa0168190:exon 25.0%
! AAAGAAAAAAAAAAGGTGAG+AGG + chr1_4:50524898-50524917 None:intergenic 25.0%
! ATCATCATCATAACTGTTAA+TGG - chr1_4:50525042-50525061 Msa0168190:intron 25.0%
!! ATCACTTTCATTGATTATTG+TGG - chr1_4:50525142-50525161 Msa0168190:intron 25.0%
!!! ATTTTTTGGTTCTGATATGT+TGG - chr1_4:50525461-50525480 Msa0168190:CDS 25.0%
! TTTATGTCTTAAGCTAGTAA+AGG + chr1_4:50525563-50525582 None:intergenic 25.0%
!! TTACTAGCTTAAGACATAAA+TGG - chr1_4:50525563-50525582 Msa0168190:intron 25.0%
!! GAAGTCTTCTAAATTAGTTT+AGG - chr1_4:50525664-50525683 Msa0168190:intron 25.0%
! AGATACACTTGAAAAAATGA+GGG + chr1_4:50525849-50525868 None:intergenic 25.0%
! TAGATACACTTGAAAAAATG+AGG + chr1_4:50525850-50525869 None:intergenic 25.0%
! TCAAGTGTATCTATTTAACT+TGG - chr1_4:50525857-50525876 Msa0168190:intron 25.0%
!!! GTATCTATTTAACTTGGTTT+TGG - chr1_4:50525863-50525882 Msa0168190:intron 25.0%
! TGAAATTTAAGTGTAGAATC+AGG - chr1_4:50526704-50526723 Msa0168190:five_prime_UTR 25.0%
! AGAACAGTATACATGTAAAT+GGG + chr1_4:50526768-50526787 None:intergenic 25.0%
! AAGAACAGTATACATGTAAA+TGG + chr1_4:50526769-50526788 None:intergenic 25.0%
! CGGAAAAATGGAAATTAATA+TGG + chr1_4:50526803-50526822 None:intergenic 25.0%
GGCAAAAATGGAATTATCTA+GGG + chr1_4:50522780-50522799 None:intergenic 30.0%
AAATGTTAGTGGAAACAATG+AGG + chr1_4:50522866-50522885 None:intergenic 30.0%
TCATTGTTTCCACTAACATT+TGG - chr1_4:50522865-50522884 Msa0168190:three_prime_UTR 30.0%
CATTGTTTCCACTAACATTT+GGG - chr1_4:50522866-50522885 Msa0168190:three_prime_UTR 30.0%
ATATATAGCCCAAATGTTAG+TGG + chr1_4:50522877-50522896 None:intergenic 30.0%
!! TTCTAAAGACTGGTATGTTT+TGG + chr1_4:50522980-50522999 None:intergenic 30.0%
AATTCGATTTACTGTTCATG+GGG + chr1_4:50523004-50523023 None:intergenic 30.0%
CAAATTCGATTTACTGTTCA+TGG + chr1_4:50523006-50523025 None:intergenic 30.0%
TTTCAATTGATCAAAGGATG+AGG + chr1_4:50523228-50523247 None:intergenic 30.0%
AGGAAACACAAAAATTTGAC+TGG + chr1_4:50523259-50523278 None:intergenic 30.0%
AACATAACCCTAAGAATTTC+TGG + chr1_4:50523322-50523341 None:intergenic 30.0%
!!! TAGTTGAGGTTTTGATTTCT+TGG - chr1_4:50523394-50523413 Msa0168190:three_prime_UTR 30.0%
!! GGTAATTTGCTAATCCTTAA+TGG - chr1_4:50523544-50523563 Msa0168190:three_prime_UTR 30.0%
! CTTTGTGTACAAATTTTTGC+TGG - chr1_4:50523670-50523689 Msa0168190:intron 30.0%
TGAGATGAAAATTATGTGCT+TGG - chr1_4:50523914-50523933 Msa0168190:intron 30.0%
GAGATGAAAATTATGTGCTT+GGG - chr1_4:50523915-50523934 Msa0168190:intron 30.0%
!! GTTTTGATAAAAAGGGAATC+AGG - chr1_4:50524041-50524060 Msa0168190:three_prime_UTR 30.0%
TGAAAATGTGATCACAATCA+TGG - chr1_4:50524069-50524088 Msa0168190:intron 30.0%
GAAAATGTGATCACAATCAT+GGG - chr1_4:50524070-50524089 Msa0168190:intron 30.0%
! ATTAAGGCTTGGTTTCATTA+AGG - chr1_4:50524168-50524187 Msa0168190:intron 30.0%
AAAGCCAACAAATGACATTA+AGG - chr1_4:50524359-50524378 Msa0168190:three_prime_UTR 30.0%
! ATTAAGGCTTGGTTTCATTA+AGG - chr1_4:50524168-50524187 Msa0168190:intron 30.0%
! ATCGTTCTTCTTTTTGTTCT+AGG - chr1_4:50524464-50524483 Msa0168190:three_prime_UTR 30.0%
! CTTATTTCTTTATTCCGTAC+AGG - chr1_4:50524667-50524686 Msa0168190:exon 30.0%
AAGTCTCTGGTATGTAAAAT+TGG - chr1_4:50525205-50525224 Msa0168190:intron 30.0%
!! TCTAATTCTTGCTGTTACTA+AGG - chr1_4:50525279-50525298 Msa0168190:intron 30.0%
TCTGTGAATAACCATATGAT+TGG - chr1_4:50525370-50525389 Msa0168190:intron 30.0%
CTGTGAATAACCATATGATT+GGG - chr1_4:50525371-50525390 Msa0168190:intron 30.0%
! ATGACACTAATATCCTTTTC+CGG - chr1_4:50525493-50525512 Msa0168190:CDS 30.0%
TATAAACCAAGAGTGGAATT+TGG + chr1_4:50525756-50525775 None:intergenic 30.0%
TCCACTCTTGGTTTATATTA+AGG - chr1_4:50525759-50525778 Msa0168190:intron 30.0%
ACCTTAATATAAACCAAGAG+TGG + chr1_4:50525763-50525782 None:intergenic 30.0%
ACATTCTTTGACAAAACAGT+TGG + chr1_4:50525972-50525991 None:intergenic 30.0%
! AACTGTTTTGTCAAAGAATG+TGG - chr1_4:50525971-50525990 Msa0168190:intron 30.0%
! ATGACATTGATATTCTGGTT+TGG + chr1_4:50526031-50526050 None:intergenic 30.0%
! AAAACGAGAAGGTCTATTTT+CGG - chr1_4:50526065-50526084 Msa0168190:intron 30.0%
CCATTATAATCAATGAACGT+TGG + chr1_4:50526241-50526260 None:intergenic 30.0%
! CCAACGTTCATTGATTATAA+TGG - chr1_4:50526238-50526257 Msa0168190:intron 30.0%
TTATAATGGTGAAACTAGCT+TGG - chr1_4:50526252-50526271 Msa0168190:intron 30.0%
CTAACTATTATTGATCATGC+CGG - chr1_4:50526311-50526330 Msa0168190:intron 30.0%
! GAAGAACAATACTTTGCTTT+TGG - chr1_4:50526369-50526388 Msa0168190:intron 30.0%
TGATGATTATTACACTGAAG+TGG + chr1_4:50526406-50526425 None:intergenic 30.0%
! TACTATCATATTTAGGGTCA+TGG - chr1_4:50526524-50526543 Msa0168190:five_prime_UTR 30.0%
! TGCACTTTGTTGAATTGTTT+TGG - chr1_4:50526563-50526582 Msa0168190:five_prime_UTR 30.0%
TGTGTCATGGTTTATTGTAA+TGG - chr1_4:50526626-50526645 Msa0168190:five_prime_UTR 30.0%
GGGCAAAAATGGAATTATCT+AGG + chr1_4:50522781-50522800 None:intergenic 35.0%
!! TTCCATTTTTGCCCTCATTT+TGG - chr1_4:50522787-50522806 Msa0168190:three_prime_UTR 35.0%
!! TCCATTTTTGCCCTCATTTT+GGG - chr1_4:50522788-50522807 Msa0168190:three_prime_UTR 35.0%
TCATTTCCTTCTTCAGATTG+TGG - chr1_4:50522906-50522925 Msa0168190:three_prime_UTR 35.0%
ATGAAACCACAATCTGAAGA+AGG + chr1_4:50522915-50522934 None:intergenic 35.0%
!! TTCTGAGATTGGTTTGAGTT+GGG - chr1_4:50523127-50523146 Msa0168190:three_prime_UTR 35.0%
GATTCTTCATAGTCATGTAG+TGG - chr1_4:50523181-50523200 Msa0168190:three_prime_UTR 35.0%
! TAATCCTTAATGGATGTGTC+TGG - chr1_4:50523554-50523573 Msa0168190:three_prime_UTR 35.0%
AATTCCAGACACATCCATTA+AGG + chr1_4:50523561-50523580 None:intergenic 35.0%
AGTTGAACTATGCGACATTA+AGG - chr1_4:50524152-50524171 Msa0168190:intron 35.0%
ACGTAAGTATGATCAATGAC+TGG - chr1_4:50524242-50524261 Msa0168190:three_prime_UTR 35.0%
! GGTAACGTTCTTTTTGTTCT+AGG - chr1_4:50524263-50524282 Msa0168190:three_prime_UTR 35.0%
!! TTTGTTCTAGGAACGTGTTA+AGG - chr1_4:50524275-50524294 Msa0168190:three_prime_UTR 35.0%
!! ATTTGTTGGCTTTACCTCAA+AGG + chr1_4:50524352-50524371 None:intergenic 35.0%
! CAAGCCTTAATGTCATTTGT+TGG + chr1_4:50524366-50524385 None:intergenic 35.0%
CAACAAATGACATTAAGGCT+TGG - chr1_4:50524364-50524383 Msa0168190:three_prime_UTR 35.0%
!! TTTGTTCTAGGAACGTGTTA+AGG - chr1_4:50524275-50524294 Msa0168190:three_prime_UTR 35.0%
AGTGAATTGTGAAGATTCCT+TGG + chr1_4:50524517-50524536 None:intergenic 35.0%
GAATCTTCACAATTCACTCT+TGG - chr1_4:50524519-50524538 Msa0168190:three_prime_UTR 35.0%
! ATTTGTTGGGTTTACCTCAA+AGG + chr1_4:50524553-50524572 None:intergenic 35.0%
!!! TAAAAAGAAAGGTTTTGGGC+AGG - chr1_4:50524616-50524635 Msa0168190:three_prime_UTR 35.0%
AGAGAAGACTAATATCGTGA+TGG + chr1_4:50524826-50524845 None:intergenic 35.0%
!! CACGATATTAGTCTTCTCTT+TGG - chr1_4:50524827-50524846 Msa0168190:CDS 35.0%
AGAAGCTAACAAATCTGCAA+AGG + chr1_4:50524865-50524884 None:intergenic 35.0%
ATTTATGAGCGTTATGAGAC+TGG - chr1_4:50524955-50524974 Msa0168190:intron 35.0%
AGACTGGTGTACATCTATAA+TGG - chr1_4:50524971-50524990 Msa0168190:intron 35.0%
TCTCTGGTATGTAAAATTGG+AGG - chr1_4:50525208-50525227 Msa0168190:intron 35.0%
TATGTAAAATTGGAGGTGAG+TGG - chr1_4:50525215-50525234 Msa0168190:intron 35.0%
ATGTAAAATTGGAGGTGAGT+GGG - chr1_4:50525216-50525235 Msa0168190:intron 35.0%
!! ATCTATCTGTGATTTGTTCG+TGG - chr1_4:50525319-50525338 Msa0168190:intron 35.0%
!!! ATAGGCTAGCTTTTTTGACA+TGG - chr1_4:50525912-50525931 Msa0168190:intron 35.0%
GTATATCATTTCGCAGAACA+AGG - chr1_4:50525937-50525956 Msa0168190:intron 35.0%
CCTGAATGACATTGATATTC+TGG + chr1_4:50526036-50526055 None:intergenic 35.0%
CCAGAATATCAATGTCATTC+AGG - chr1_4:50526033-50526052 Msa0168190:intron 35.0%
!! GGTTGATAAGAAAAACGAGA+AGG - chr1_4:50526054-50526073 Msa0168190:intron 35.0%
AGAGTTCTACAAAATAGAGC+TGG - chr1_4:50526108-50526127 Msa0168190:intron 35.0%
GAGTTCTACAAAATAGAGCT+GGG - chr1_4:50526109-50526128 Msa0168190:intron 35.0%
ATAGCCATAAGGAGTAGATT+CGG + chr1_4:50526163-50526182 None:intergenic 35.0%
TCCTTATGGCTATAACAAAC+AGG - chr1_4:50526170-50526189 Msa0168190:intron 35.0%
!! TCCTGTTTGTTATAGCCATA+AGG + chr1_4:50526174-50526193 None:intergenic 35.0%
ATGGCTATAACAAACAGGAA+AGG - chr1_4:50526175-50526194 Msa0168190:intron 35.0%
TGGCTATAACAAACAGGAAA+GGG - chr1_4:50526176-50526195 Msa0168190:intron 35.0%
! TAGCTGGAATGGAATTTGTT+GGG + chr1_4:50526216-50526235 None:intergenic 35.0%
GTTAGCATACTATCTTCCAA+GGG + chr1_4:50526296-50526315 None:intergenic 35.0%
AGTTAGCATACTATCTTCCA+AGG + chr1_4:50526297-50526316 None:intergenic 35.0%
!! ACAATACTTTGCTTTTGGTG+AGG - chr1_4:50526374-50526393 Msa0168190:intron 35.0%
CTGATACATGTATCTCCTAT+TGG + chr1_4:50526455-50526474 None:intergenic 35.0%
CAATAGGAGATACATGTATC+AGG - chr1_4:50526453-50526472 Msa0168190:five_prime_UTR 35.0%
TAATTTATCCTGCTCTTCAC+TGG + chr1_4:50526502-50526521 None:intergenic 35.0%
TGCAGCAATAATTCAAAGAC+AGG + chr1_4:50526654-50526673 None:intergenic 35.0%
! TTCATGGGGTTTCTAAAGAC+TGG + chr1_4:50522990-50523009 None:intergenic 40.0%
TCGATGAACAGTAATGCGAT+AGG - chr1_4:50523103-50523122 Msa0168190:three_prime_UTR 40.0%
CGATGAACAGTAATGCGATA+GGG - chr1_4:50523104-50523123 Msa0168190:three_prime_UTR 40.0%
!! GTTCTGAGATTGGTTTGAGT+TGG - chr1_4:50523126-50523145 Msa0168190:three_prime_UTR 40.0%
GTTCTTTGATCTGCTGTTGT+TGG - chr1_4:50523149-50523168 Msa0168190:three_prime_UTR 40.0%
GCTTGCATGTCTTCACAAAA+AGG - chr1_4:50523350-50523369 Msa0168190:three_prime_UTR 40.0%
CATGTACACAAAACGGAATC+AGG + chr1_4:50523436-50523455 None:intergenic 40.0%
AACTATGCGACATTAAGGCT+TGG - chr1_4:50524157-50524176 Msa0168190:intron 40.0%
GAATATTCACAGTTCACTCC+TGG - chr1_4:50524318-50524337 Msa0168190:three_prime_UTR 40.0%
!! TCTGCTTTGAAAACCCTGTA+CGG + chr1_4:50524684-50524703 None:intergenic 40.0%
! TTTCAAAGCAGAAGTGCAAC+TGG - chr1_4:50524692-50524711 Msa0168190:CDS 40.0%
! TTTTGAGCTTGATGTTGGCA+TGG + chr1_4:50524756-50524775 None:intergenic 40.0%
!!! CTTGGTTTTGAGCTTGATGT+TGG + chr1_4:50524761-50524780 None:intergenic 40.0%
TGTAAAATTGGAGGTGAGTG+GGG - chr1_4:50525217-50525236 Msa0168190:intron 40.0%
!! TTCTTGCTGTTACTAAGGAG+AGG - chr1_4:50525284-50525303 Msa0168190:intron 40.0%
!! TCTTGCTGTTACTAAGGAGA+GGG - chr1_4:50525285-50525304 Msa0168190:intron 40.0%
TCAATATCACCACCAAGTTC+TGG + chr1_4:50525525-50525544 None:intergenic 40.0%
!! ACTTGGTGGTGATATTGACT+TGG - chr1_4:50525527-50525546 Msa0168190:five_prime_UTR 40.0%
GACTATCCAAATTCCACTCT+TGG - chr1_4:50525747-50525766 Msa0168190:intron 40.0%
CTTGAAAAAATGAGGGTCGA+GGG + chr1_4:50525842-50525861 None:intergenic 40.0%
ACTTGAAAAAATGAGGGTCG+AGG + chr1_4:50525843-50525862 None:intergenic 40.0%
GTATCCGAATCTACTCCTTA+TGG - chr1_4:50526156-50526175 Msa0168190:intron 40.0%
GGCTATAACAAACAGGAAAG+GGG - chr1_4:50526177-50526196 Msa0168190:intron 40.0%
!! TGGAATGGAATTTGTTGGGT+AGG + chr1_4:50526212-50526231 None:intergenic 40.0%
GTAGCTGGAATGGAATTTGT+TGG + chr1_4:50526217-50526236 None:intergenic 40.0%
! TAATGGTGAAACTAGCTTGG+TGG - chr1_4:50526255-50526274 Msa0168190:intron 40.0%
ATGACACAACAGTGAACATG+TGG + chr1_4:50526614-50526633 None:intergenic 40.0%
ACATGTTCACTGTTGTGTCA+TGG - chr1_4:50526613-50526632 Msa0168190:five_prime_UTR 40.0%
GCCCAAAATGAGGGCAAAAA+TGG + chr1_4:50522792-50522811 None:intergenic 45.0%
! CCCTAAAGTGCCCAAAATGA+GGG + chr1_4:50522801-50522820 None:intergenic 45.0%
! CCCTCATTTTGGGCACTTTA+GGG - chr1_4:50522798-50522817 Msa0168190:three_prime_UTR 45.0%
! CCTCATTTTGGGCACTTTAG+GGG - chr1_4:50522799-50522818 Msa0168190:three_prime_UTR 45.0%
!! ATGCGATAGGGTTCTGAGAT+TGG - chr1_4:50523116-50523135 Msa0168190:three_prime_UTR 45.0%
! GTCATGTAGTGGTGCAGTTT+TGG - chr1_4:50523192-50523211 Msa0168190:three_prime_UTR 45.0%
!!! TGTAGTGGTGCAGTTTTGGA+AGG - chr1_4:50523196-50523215 Msa0168190:three_prime_UTR 45.0%
TCATCATCGCTGAAGGAAAC+CGG + chr1_4:50524728-50524747 None:intergenic 45.0%
AGCTCAAAACCAAGCACTAG+AGG - chr1_4:50524767-50524786 Msa0168190:CDS 45.0%
CAAAACCAAGCACTAGAGGT+CGG - chr1_4:50524771-50524790 Msa0168190:CDS 45.0%
! TTTTCACAGAAGCCTGACCA+TGG + chr1_4:50525097-50525116 None:intergenic 45.0%
TGTGCAAGTACACAAGTCTC+TGG - chr1_4:50525192-50525211 Msa0168190:intron 45.0%
AGATACTCTCCATCATCGCA+TGG + chr1_4:50525346-50525365 None:intergenic 45.0%
CTGAGGATACTGTGTTCTTC+CGG - chr1_4:50525398-50525417 Msa0168190:intron 45.0%
TGAGGATACTGTGTTCTTCC+GGG - chr1_4:50525399-50525418 Msa0168190:intron 45.0%
AGAGCAAGACAAAACCTTCC+CGG + chr1_4:50525420-50525439 None:intergenic 45.0%
TTCGCAGAACAAGGCTAGAA+TGG - chr1_4:50525946-50525965 Msa0168190:intron 45.0%
! GAGAAGGTCTATTTTCGGCA+GGG - chr1_4:50526070-50526089 Msa0168190:intron 45.0%
TCAATGAACGTTGGTGTAGC+TGG + chr1_4:50526232-50526251 None:intergenic 45.0%
GTGCTTGTGAAGTCCATTGA+CGG - chr1_4:50526427-50526446 Msa0168190:five_prime_UTR 45.0%
! TATTTAGGGTCATGGTGTGC+AGG - chr1_4:50526532-50526551 Msa0168190:five_prime_UTR 45.0%
! ATTTAGGGTCATGGTGTGCA+GGG - chr1_4:50526533-50526552 Msa0168190:five_prime_UTR 45.0%
CTGCACTCTCTGAACTAATC+AGG - chr1_4:50526669-50526688 Msa0168190:five_prime_UTR 45.0%
! GCCCTCATTTTGGGCACTTT+AGG - chr1_4:50522797-50522816 Msa0168190:three_prime_UTR 50.0%
! CCCCTAAAGTGCCCAAAATG+AGG + chr1_4:50522802-50522821 None:intergenic 50.0%
!!! TGGGCACTTTAGGGGCATTT+TGG - chr1_4:50522807-50522826 Msa0168190:three_prime_UTR 50.0%
!! TCTTGGTGCTCAGTCCTTTG+AGG - chr1_4:50524536-50524555 Msa0168190:three_prime_UTR 50.0%
TGCAACTGGAGCTGATAGTC+CGG - chr1_4:50524706-50524725 Msa0168190:CDS 50.0%
GGCATCTTCATCATCGCTGA+AGG + chr1_4:50524735-50524754 None:intergenic 50.0%
AAGCACGCAGGTTTGTCGAA+TGG - chr1_4:50525251-50525270 Msa0168190:intron 50.0%
CCTCAGCTTGCCCAATCATA+TGG + chr1_4:50525384-50525403 None:intergenic 50.0%
CCATATGATTGGGCAAGCTG+AGG - chr1_4:50525381-50525400 Msa0168190:intron 50.0%
GATACTGTGTTCTTCCGGGA+AGG - chr1_4:50525403-50525422 Msa0168190:intron 50.0%
GTTCTGGTGCAAACCGGAAA+AGG + chr1_4:50525509-50525528 None:intergenic 50.0%
! TTCCGGTTTGCACCAGAACT+TGG - chr1_4:50525510-50525529 Msa0168190:exon 50.0%
! CACCAAGTTCTGGTGCAAAC+CGG + chr1_4:50525515-50525534 None:intergenic 50.0%
! CGAGAAGGTCTATTTTCGGC+AGG - chr1_4:50526069-50526088 Msa0168190:intron 50.0%
! AGGTCTATTTTCGGCAGGGT+TGG - chr1_4:50526074-50526093 Msa0168190:intron 50.0%
ACAAAATAGAGCTGGGTGCC+TGG - chr1_4:50526116-50526135 Msa0168190:intron 50.0%
CGCATATGTCAGCCAAATCC+AGG + chr1_4:50526137-50526156 None:intergenic 50.0%
GAACGTTGGTGTAGCTGGAA+TGG + chr1_4:50526227-50526246 None:intergenic 50.0%
GTGTCAGCATGCATTTCCCT+TGG - chr1_4:50526277-50526296 Msa0168190:intron 50.0%
! AGTCCATTGACGGTGCCAAT+AGG - chr1_4:50526437-50526456 Msa0168190:five_prime_UTR 50.0%
TCTCCTATTGGCACCGTCAA+TGG + chr1_4:50526443-50526462 None:intergenic 50.0%
CTGGACAACGAATGAGATGC+AGG + chr1_4:50526483-50526502 None:intergenic 50.0%
TTCGTTGTCCAGTGAAGAGC+AGG - chr1_4:50526491-50526510 Msa0168190:five_prime_UTR 50.0%
TCCTGGTGCTCAGTCCTTTG+AGG - chr1_4:50524335-50524354 Msa0168190:three_prime_UTR 55.0%
ACCTCAAAGGACTGAGCACC+AGG + chr1_4:50524339-50524358 None:intergenic 55.0%
CCTTTCCGACCTCTAGTGCT+TGG + chr1_4:50524779-50524798 None:intergenic 55.0%
CCAAGCACTAGAGGTCGGAA+AGG - chr1_4:50524776-50524795 Msa0168190:CDS 55.0%
TTTCAACGCAGCTCCTGCCA+TGG - chr1_4:50525077-50525096 Msa0168190:CDS 55.0%
GAGTGCTTTGCAAAGCACGC+AGG - chr1_4:50525239-50525258 Msa0168190:intron 55.0%
GTTCGTGGACCATGCGATGA+TGG - chr1_4:50525334-50525353 Msa0168190:intron 55.0%
CGGTTTGCACCAGAACTTGG+TGG - chr1_4:50525513-50525532 Msa0168190:exon 55.0%
TAGAGCTGGGTGCCTGGATT+TGG - chr1_4:50526122-50526141 Msa0168190:intron 55.0%
TTGATCATGCCGGATGCGAG+TGG - chr1_4:50526321-50526340 Msa0168190:intron 55.0%
CTCACATCTCCACTCGCATC+CGG + chr1_4:50526333-50526352 None:intergenic 55.0%
GGAGTGATCGACACGCTCGA+AGG - chr1_4:50524296-50524315 Msa0168190:three_prime_UTR 60.0%
CACAGAAGCCTGACCATGGC+AGG + chr1_4:50525093-50525112 None:intergenic 60.0%
AGGGTCATGGTGTGCAGGGT+TGG - chr1_4:50526537-50526556 Msa0168190:five_prime_UTR 60.0%
GGAGCGATCTACGCGCTCCA+AGG - chr1_4:50524497-50524516 Msa0168190:three_prime_UTR 65.0%
ACGCAGCTCCTGCCATGGTC+AGG - chr1_4:50525082-50525101 Msa0168190:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 50522776 50526826 50522776 ID=Msa0168190;Name=Msa0168190
chr1_4 mRNA 50522776 50526826 50522776 ID=Msa0168190-mRNA-1;Parent=Msa0168190;Name=Msa0168190-mRNA-1;_AED=0.19;_eAED=0.19;_QI=475|1|1|1|0.4|0.33|6|1450|137
chr1_4 exon 50522776 50523649 50522776 ID=Msa0168190-mRNA-1:exon:14894;Parent=Msa0168190-mRNA-1
chr1_4 exon 50523997 50524076 50523997 ID=Msa0168190-mRNA-1:exon:14893;Parent=Msa0168190-mRNA-1
chr1_4 exon 50524178 50524913 50524178 ID=Msa0168190-mRNA-1:exon:14892;Parent=Msa0168190-mRNA-1
chr1_4 exon 50525045 50525116 50525045 ID=Msa0168190-mRNA-1:exon:14891;Parent=Msa0168190-mRNA-1
chr1_4 exon 50525413 50525547 50525413 ID=Msa0168190-mRNA-1:exon:14890;Parent=Msa0168190-mRNA-1
chr1_4 exon 50526385 50526826 50526385 ID=Msa0168190-mRNA-1:exon:14889;Parent=Msa0168190-mRNA-1
chr1_4 five_prime_UTR 50526385 50526826 50526385 ID=Msa0168190-mRNA-1:five_prime_utr;Parent=Msa0168190-mRNA-1
chr1_4 five_prime_UTR 50525515 50525547 50525515 ID=Msa0168190-mRNA-1:five_prime_utr;Parent=Msa0168190-mRNA-1
chr1_4 CDS 50525413 50525514 50525413 ID=Msa0168190-mRNA-1:cds;Parent=Msa0168190-mRNA-1
chr1_4 CDS 50525045 50525116 50525045 ID=Msa0168190-mRNA-1:cds;Parent=Msa0168190-mRNA-1
chr1_4 CDS 50524674 50524913 50524674 ID=Msa0168190-mRNA-1:cds;Parent=Msa0168190-mRNA-1
chr1_4 three_prime_UTR 50524178 50524673 50524178 ID=Msa0168190-mRNA-1:three_prime_utr;Parent=Msa0168190-mRNA-1
chr1_4 three_prime_UTR 50523997 50524076 50523997 ID=Msa0168190-mRNA-1:three_prime_utr;Parent=Msa0168190-mRNA-1
chr1_4 three_prime_UTR 50522776 50523649 50522776 ID=Msa0168190-mRNA-1:three_prime_utr;Parent=Msa0168190-mRNA-1
Gene Sequence

>Msa0168190

ATGGGTTTAGAAGCTATTTTATTTCAGAAATCATTTTTCAAGCAATTTTATGGATCTGTGACAAAGTTGAACTATGCGACATTAAGGCTTGGTTTCATTAAGGAACGTGTTAAGGAGCGATCTACGCGCTCCAAGGAATCTTCACAATTCACTCTTGGTGCTCAGTCCTTTGAGGGTTTTCAAAGCAGAAGTGCAACTGGAGCTGATAGTCCGGTTTCCTTCAGCGATGATGAAGATGCCATGCCAACATCAAGCTCAAAACCAAGCACTAGAGGTCGGAAAGGATCTGTTGCATCTAATTGTAAACACCATCACGATATTAGTCTTCTCTTTGGCATTTTGCAAAACCTTTGCAGATTTGTTAGCTTCTATTCAATTCGCCTCTCACCTTTTTTTTTTCTTTCTTTCAATTAG
Protein sequence

>Msa0168190

MGLEAILFQKSFFKQFYGSVTKLNYATLRLGFIKERVKERSTRSKESSQFTLGAQSFEGFQSRSATGADSPVSFSDDEDAMPTSSSKPSTRGRKGSVASNCKHHHDISLLFGILQNLCRFVSFYSIRLSPFFFLSFN*