AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0339910


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0339910 MtrunA17_Chr2g0328671 91.781 438 14 1 1 416 1 438 0.0 786
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0339910 AT5G59210.1 61.697 436 142 4 1 415 1 432 3.79e-176 499
Msa0339910 AT5G59210.2 61.009 436 144 4 1 415 1 431 1.10e-173 493

Find 109 sgRNAs with CRISPR-Local

Find 540 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCCATTTGTCATCAAATT+AGG 0.183216 2_4:+61175803 None:intergenic
CTCGTGTACCTCGTTCTTAA+TGG 0.224009 2_4:+61176569 None:intergenic
TGAGCTAGCTGGTTTAAAAT+TGG 0.235728 2_4:-61179541 Msa0339910:CDS
ACCTCGTTCTTAATGGATTC+TGG 0.270163 2_4:+61176576 None:intergenic
CATCCTTAAGACGTTTCTTC+AGG 0.287567 2_4:+61179794 None:intergenic
GTTCATTGGTTGTACGATAA+TGG 0.302872 2_4:-61175870 Msa0339910:exon
AAGATGTGTATCCTCGTTAT+AGG 0.306317 2_4:-61175542 Msa0339910:three_prime_UTR
AATTCCCTTCGCCGCCCCTT+TGG 0.307961 2_4:+61182718 None:intergenic
AGATTGGTCAAAGCCTCTTC+TGG 0.309793 2_4:-61182490 Msa0339910:CDS
ATTCCCTTCGCCGCCCCTTT+GGG 0.311102 2_4:+61182719 None:intergenic
CATGCAACTAACTTTGCTTC+AGG 0.352933 2_4:-61182803 Msa0339910:five_prime_UTR
AAAATACGGTGCCATCTCTT+AGG 0.353053 2_4:-61179975 Msa0339910:CDS
TAGCTAACTGTTCTTGCCCC+TGG 0.370428 2_4:+61179403 None:intergenic
TGTTCTTTACATATTAATCT+TGG 0.374581 2_4:+61175653 None:intergenic
TGATAAGCAGTTGCATGATA+TGG 0.395775 2_4:-61177624 Msa0339910:CDS
CAAATTCATGTGTATAACAT+AGG 0.403460 2_4:+61175696 None:intergenic
CATCTCTTAGGAAAGCTCTC+AGG 0.408962 2_4:-61179963 Msa0339910:CDS
AGTCCTAATTTGATGACAAA+TGG 0.412547 2_4:-61175806 Msa0339910:three_prime_UTR
CAAACGATGGAAATTGATAA+TGG 0.414063 2_4:-61180204 Msa0339910:CDS
GAGCAGGGTGTTTCAGTAAC+TGG 0.430456 2_4:-61175743 Msa0339910:three_prime_UTR
AATTCATATCAAGAGGCAAT+TGG 0.436621 2_4:-61177406 Msa0339910:CDS
AATGAAGCAAGACAGTTCAT+TGG 0.436705 2_4:-61175884 Msa0339910:CDS
AGATGTGTATCCTCGTTATA+GGG 0.444925 2_4:-61175541 Msa0339910:three_prime_UTR
AAAGAACAGGCACTAACAAA+TGG 0.449730 2_4:-61175638 Msa0339910:three_prime_UTR
TTTGTTCATGCAGAAGTCTC+AGG 0.450124 2_4:-61178828 Msa0339910:intron
AAGAACAGGCACTAACAAAT+GGG 0.450565 2_4:-61175637 Msa0339910:three_prime_UTR
CTTTCAATGTTGCGCAGCAC+TGG 0.450610 2_4:+61175919 None:intergenic
AAGATTAATATGTAAAGAAC+AGG 0.456386 2_4:-61175651 Msa0339910:three_prime_UTR
ATGAGTTGGATGAAGAAAAC+AGG 0.456410 2_4:-61180336 Msa0339910:CDS
TACCCTGAAGAAACGTCTTA+AGG 0.456445 2_4:-61179797 Msa0339910:CDS
TGGTCGGGTGGACCAATAGA+TGG 0.457820 2_4:+61179585 None:intergenic
CAGTAGACAGAAACTTCTAA+TGG 0.462491 2_4:-61177576 Msa0339910:CDS
TGGTTTAAAATTGGAACTAC+AGG 0.466540 2_4:-61179532 Msa0339910:intron
AAAACCCAAAGGGGCGGCGA+AGG 0.466659 2_4:-61182723 Msa0339910:five_prime_UTR
TGCTCAGTTCCTTCACAAGT+TGG 0.467221 2_4:+61176145 None:intergenic
GTTAGTACAATACCATCTAT+TGG 0.468879 2_4:-61179597 Msa0339910:CDS
ATCCTTAAGACGTTTCTTCA+GGG 0.470102 2_4:+61179795 None:intergenic
TGAGTCACTGATGAGGCACC+AGG 0.470593 2_4:-61179421 Msa0339910:CDS
GTCGGAACCTGGCTTAGATC+TGG 0.480545 2_4:+61182466 None:intergenic
AAAGAGAGCACAGGATAGAT+TGG 0.482201 2_4:-61182506 Msa0339910:CDS
GTTGGTTCCTCGACATCTAC+AGG 0.485383 2_4:-61176546 Msa0339910:CDS
GCACAAGCAGTTGAATGAAC+TGG 0.485805 2_4:-61180175 Msa0339910:intron
GTTTCAGTAACTGGCTGTGA+CGG 0.490171 2_4:-61175734 Msa0339910:three_prime_UTR
ATTCCTGCAGGAGCAAAATA+CGG 0.491385 2_4:-61179989 Msa0339910:intron
AATTGGAGCAGCAGCAAGAT+GGG 0.496142 2_4:-61177389 Msa0339910:CDS
AACTCAGAAGACATTCACTA+TGG 0.497995 2_4:-61178799 Msa0339910:intron
CCTCCATTGTTACCCACGAC+GGG 0.500866 2_4:+61182674 None:intergenic
AATATTTGAAGATGGTGGTC+GGG 0.503219 2_4:+61179570 None:intergenic
CTCAAATAAAAGTTCTGCAA+TGG 0.505209 2_4:-61180366 Msa0339910:CDS
GGCGTTAGCTGTAGAGAGGT+TGG 0.514417 2_4:-61177603 Msa0339910:CDS
GATGTCTGAAAAGCAAGAGT+TGG 0.521117 2_4:-61179355 Msa0339910:CDS
CAATTGGAGCAGCAGCAAGA+TGG 0.521758 2_4:-61177390 Msa0339910:CDS
AAATTCATGTGTATAACATA+GGG 0.523492 2_4:+61175697 None:intergenic
GGGTACGAAGCTGCGCTGAA+AGG 0.526422 2_4:+61179815 None:intergenic
AATGGATTCTGGTAAGCCAT+TGG 0.528969 2_4:+61176587 None:intergenic
AGCAAAATGAAGAGCTGCGT+GGG 0.529017 2_4:-61176638 Msa0339910:CDS
TTTGCATCAGATTTCTTCAT+CGG 0.529569 2_4:-61182750 Msa0339910:five_prime_UTR
CAAGTCAAACAAGCATATGA+TGG 0.532289 2_4:-61176072 Msa0339910:CDS
TATAAAATTGATATGAACAA+TGG 0.536998 2_4:+61175772 None:intergenic
TAATATTTGAAGATGGTGGT+CGG 0.537953 2_4:+61179569 None:intergenic
ATATTAGAAAATGAGCTAGC+TGG 0.539429 2_4:-61179552 Msa0339910:CDS
TTTCAGTAACTGGCTGTGAC+GGG 0.540362 2_4:-61175733 Msa0339910:three_prime_UTR
GAGGCTCGTCATGCATCTCT+AGG 0.542218 2_4:-61182655 Msa0339910:CDS
ATCTCTTAGGAAAGCTCTCA+GGG 0.542321 2_4:-61179962 Msa0339910:CDS
TTTCTAATATTTGAAGATGG+TGG 0.548198 2_4:+61179565 None:intergenic
AGCAGCAAGATGGGAAAACC+AGG 0.551181 2_4:-61177380 Msa0339910:intron
AAACCCAAAGGGGCGGCGAA+GGG 0.551283 2_4:-61182722 Msa0339910:five_prime_UTR
TCTCTCAAATTCATATCAAG+AGG 0.556927 2_4:-61177413 Msa0339910:CDS
TTCTGGACCAGATCTAAGCC+AGG 0.557069 2_4:-61182473 Msa0339910:intron
AGGAGAGGTGGCATCTCTGA+AGG 0.562380 2_4:-61176526 Msa0339910:intron
AGCTCTCAGGGATGTTGCAA+TGG 0.563071 2_4:-61179950 Msa0339910:CDS
CTGAGAGCTTTCCTAAGAGA+TGG 0.567214 2_4:+61179964 None:intergenic
GTGCTGCGCAACATTGAAAG+TGG 0.568193 2_4:-61175916 Msa0339910:CDS
TTGGCAGGGCCAACTTGTGA+AGG 0.574471 2_4:-61176154 Msa0339910:intron
ACCTGCAGCCTCTCTTGACA+TGG 0.574630 2_4:+61179317 None:intergenic
ACGTCTTAAGGATGCTGAAG+AGG 0.580391 2_4:-61179785 Msa0339910:CDS
GCAATGGAAGAACAATGAGT+TGG 0.580698 2_4:-61180350 Msa0339910:CDS
AAACAGGAAAATAACTTCGA+AGG 0.586204 2_4:-61180320 Msa0339910:intron
AAGAACGAGGTACACGAGGT+TGG 0.590666 2_4:-61176564 Msa0339910:CDS
AATTCGTCAAAAGAGAGCAC+AGG 0.597702 2_4:-61182515 Msa0339910:CDS
ATTTGAAGATGGTGGTCGGG+TGG 0.600067 2_4:+61179573 None:intergenic
TTACCCTCTAGTTTAATACC+AGG 0.600543 2_4:-61175477 Msa0339910:three_prime_UTR
GCTTAGATCTGGTCCAGAAG+AGG 0.601055 2_4:+61182477 None:intergenic
ATTAAACTCCATGTCAAGAG+AGG 0.604029 2_4:-61179325 Msa0339910:CDS
CTCGACATCTACAGGAGAGG+TGG 0.609171 2_4:-61176538 Msa0339910:CDS
CACCTCTCCTGTAGATGTCG+AGG 0.610163 2_4:+61176539 None:intergenic
ACTTCCTGGTATTAAACTAG+AGG 0.610877 2_4:+61175473 None:intergenic
CCCGTCGTGGGTAACAATGG+AGG 0.617638 2_4:-61182674 Msa0339910:exon
ATTGTTGCAGCTTCAAACGA+TGG 0.618151 2_4:-61180217 Msa0339910:intron
TTACGAGTGGAACAGGCCAA+TGG 0.620799 2_4:-61176603 Msa0339910:CDS
CTCCATTGTTACCCACGACG+GGG 0.625665 2_4:+61182675 None:intergenic
GCCTCCATTGTTACCCACGA+CGG 0.628775 2_4:+61182673 None:intergenic
GAAGGAACTGAGCAGAGCAG+AGG 0.632473 2_4:-61176136 Msa0339910:CDS
GAGTCACTGATGAGGCACCA+GGG 0.634929 2_4:-61179420 Msa0339910:CDS
AGTCACTGATGAGGCACCAG+GGG 0.636835 2_4:-61179419 Msa0339910:CDS
CTTCCTGGTATTAAACTAGA+GGG 0.644502 2_4:+61175474 None:intergenic
TGCATCTCTAGGTCGACGAA+CGG 0.654276 2_4:-61182644 Msa0339910:intron
CATTAAGAACGAGGTACACG+AGG 0.655744 2_4:-61176568 Msa0339910:CDS
TAGACAGAAACTTCTAATGG+AGG 0.657126 2_4:-61177573 Msa0339910:intron
AAGCAAAATGAAGAGCTGCG+TGG 0.661738 2_4:-61176639 Msa0339910:CDS
TCCATGTCAAGAGAGGCTGC+AGG 0.662258 2_4:-61179318 Msa0339910:intron
TTGTTATGCACCCTATAACG+AGG 0.668672 2_4:+61175531 None:intergenic
TCCATTGTTACCCACGACGG+GGG 0.669445 2_4:+61182676 None:intergenic
CAGACATCAGTGATGCAATG+CGG 0.670305 2_4:+61179370 None:intergenic
AGAACAGGCACTAACAAATG+GGG 0.676074 2_4:-61175636 Msa0339910:three_prime_UTR
TTCCTCGACATCTACAGGAG+AGG 0.677582 2_4:-61176541 Msa0339910:CDS
ATATGGCGTTAGCTGTAGAG+AGG 0.679585 2_4:-61177607 Msa0339910:CDS
ACCAGAATCCATTAAGAACG+AGG 0.708984 2_4:-61176577 Msa0339910:CDS
TACAGCGTGAGTCACTGATG+AGG 0.718845 2_4:-61179428 Msa0339910:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTAAAAAAATAAAAA+TGG + chr2_4:61177677-61177696 None:intergenic 0.0%
!!! TTTTTTTTCTTTTTTCTTTT+TGG + chr2_4:61175525-61175544 None:intergenic 10.0%
!! TAAAAATTGAAAGAATAAAA+TGG + chr2_4:61176975-61176994 None:intergenic 10.0%
!! AAAAAGGAAATTAAATTAAA+GGG + chr2_4:61178822-61178841 None:intergenic 10.0%
!! AAAAAAGGAAATTAAATTAA+AGG + chr2_4:61178823-61178842 None:intergenic 10.0%
!!! GATAAAATCTAAAATTATAA+AGG + chr2_4:61180143-61180162 None:intergenic 10.0%
!! TTTCTACTAAATAATAAATA+GGG + chr2_4:61181062-61181081 None:intergenic 10.0%
!!! TTTTCTACTAAATAATAAAT+AGG + chr2_4:61181063-61181082 None:intergenic 10.0%
!! AGTGATATATTATATTATTA+TGG - chr2_4:61181372-61181391 Msa0339910:intron 10.0%
!!! TCATATCAATTTTATAAAAA+TGG - chr2_4:61182533-61182552 Msa0339910:intron 10.0%
!!! TACTTTTGTACTTTAAATTA+CGG + chr2_4:61177210-61177229 None:intergenic 15.0%
!!! AACTTTTATTTGAGATAATA+GGG + chr2_4:61177926-61177945 None:intergenic 15.0%
!! AAAAGGAAATTAAATTAAAG+GGG + chr2_4:61178821-61178840 None:intergenic 15.0%
!!! TATAAGACATGTATTTTTTA+AGG + chr2_4:61179231-61179250 None:intergenic 15.0%
!!! TTTAGTGAATTTTCAATATT+TGG - chr2_4:61179540-61179559 Msa0339910:CDS 15.0%
!! TGTATTCTTCAAAAAAAAAA+AGG + chr2_4:61179738-61179757 None:intergenic 15.0%
!!! CACAAAATATTTTAAGAAAA+TGG + chr2_4:61179863-61179882 None:intergenic 15.0%
!!! CATTTTCTTAAAATATTTTG+TGG - chr2_4:61179861-61179880 Msa0339910:intron 15.0%
!!! TCTAATATGTTTTTGTTTAA+TGG - chr2_4:61180612-61180631 Msa0339910:intron 15.0%
!! TCAAATAAAATATTAAACCA+AGG + chr2_4:61181013-61181032 None:intergenic 15.0%
!! ATTATTTAGTAGAAAAATAC+TGG - chr2_4:61181067-61181086 Msa0339910:intron 15.0%
!! TTAAAAATGAAATCTATTCT+GGG - chr2_4:61181221-61181240 Msa0339910:intron 15.0%
!! CATAAATATATAAACATTGT+CGG + chr2_4:61181518-61181537 None:intergenic 15.0%
!!! TTTTCAAAAAAAACATGAAT+TGG + chr2_4:61181843-61181862 None:intergenic 15.0%
!!! ATTCATGTTTTTTTTGAAAA+TGG - chr2_4:61181843-61181862 Msa0339910:intron 15.0%
!! TATAAAATTGATATGAACAA+TGG + chr2_4:61182529-61182548 None:intergenic 15.0%
!! AATCAAAAATTGAAGATGAA+AGG + chr2_4:61175716-61175735 None:intergenic 20.0%
!!! ACGAAAAACAAAATTGATTT+GGG + chr2_4:61175924-61175943 None:intergenic 20.0%
!! AACGAAAAACAAAATTGATT+TGG + chr2_4:61175925-61175944 None:intergenic 20.0%
!! TAAAATAAAACAAGTGTGAT+TGG - chr2_4:61176482-61176501 Msa0339910:intron 20.0%
!!! TTTAAAACTTGAAACAAACA+TGG + chr2_4:61177504-61177523 None:intergenic 20.0%
!! AAAATGGAAATAAATGTTGA+TGG + chr2_4:61177661-61177680 None:intergenic 20.0%
!!! TTAATTTCTAAAACATTCCA+AGG - chr2_4:61177696-61177715 Msa0339910:intron 20.0%
!!! TAAATTTTTACCAAACACAT+GGG - chr2_4:61177724-61177743 Msa0339910:intron 20.0%
!!! GAACTTTTATTTGAGATAAT+AGG + chr2_4:61177927-61177946 None:intergenic 20.0%
!! TGATTAGTAATTACTAACTA+TGG + chr2_4:61178210-61178229 None:intergenic 20.0%
!!! TTTTGTTCTCAAAATCTTAT+TGG - chr2_4:61178595-61178614 Msa0339910:intron 20.0%
!!! CATTTTCTAATATTTGAAGA+TGG + chr2_4:61178739-61178758 None:intergenic 20.0%
!! TAAATAAGAACTTGAATTTG+TGG + chr2_4:61179144-61179163 None:intergenic 20.0%
!!! AAATTCAAGTTCTTATTTAG+TGG - chr2_4:61179145-61179164 Msa0339910:intron 20.0%
!! AAACAGTAAAGTAAATTTCT+TGG + chr2_4:61179589-61179608 None:intergenic 20.0%
!!! TTCTTAAAATATTTTGTGGA+AGG - chr2_4:61179865-61179884 Msa0339910:intron 20.0%
!!! TCTTAAAATATTTTGTGGAA+GGG - chr2_4:61179866-61179885 Msa0339910:intron 20.0%
!! TCGTATATAAACTGTAAAAA+TGG + chr2_4:61180116-61180135 None:intergenic 20.0%
!! TAAACAAAAACATATTAGAC+AGG + chr2_4:61180611-61180630 None:intergenic 20.0%
!! TTCTGACTAAATGTAATTTA+TGG - chr2_4:61180959-61180978 Msa0339910:intron 20.0%
!! TAAATGTAATTTATGGTTTC+TGG - chr2_4:61180966-61180985 Msa0339910:intron 20.0%
!! CTTAAAAATGAAATCTATTC+TGG - chr2_4:61181220-61181239 Msa0339910:intron 20.0%
!! TATTAATAAAAGCAAAAGGA+GGG + chr2_4:61181350-61181369 None:intergenic 20.0%
!! ATATTAATAAAAGCAAAAGG+AGG + chr2_4:61181351-61181370 None:intergenic 20.0%
!! CTGATATTAATAAAAGCAAA+AGG + chr2_4:61181354-61181373 None:intergenic 20.0%
!! AGAAACAAAAAAATTCAGTA+TGG + chr2_4:61181592-61181611 None:intergenic 20.0%
!! TTTATCTATAAGAAACTTCA+AGG - chr2_4:61182047-61182066 Msa0339910:intron 20.0%
!!! AATTTTATAAAAATGGAGCA+GGG - chr2_4:61182540-61182559 Msa0339910:intron 20.0%
!! AAATTCATGTGTATAACATA+GGG + chr2_4:61182604-61182623 None:intergenic 20.0%
!! TGTTCTTTACATATTAATCT+TGG + chr2_4:61182648-61182667 None:intergenic 20.0%
!! AAGATTAATATGTAAAGAAC+AGG - chr2_4:61182647-61182666 Msa0339910:CDS 20.0%
! TACTCAACAATTAAAAAGGA+GGG + chr2_4:61176017-61176036 None:intergenic 25.0%
! AGTACTTATCATAGGAAAAA+TGG - chr2_4:61176121-61176140 Msa0339910:CDS 25.0%
!!! AGTTTTAAAAATTTGTTCCC+AGG - chr2_4:61177515-61177534 Msa0339910:intron 25.0%
! GGTAAAAATTTAGATTTCCT+TGG + chr2_4:61177716-61177735 None:intergenic 25.0%
!! CTAAATTTTTACCAAACACA+TGG - chr2_4:61177723-61177742 Msa0339910:intron 25.0%
! TTTCTAATATTTGAAGATGG+TGG + chr2_4:61178736-61178755 None:intergenic 25.0%
! ATTTAAATTGCCATTAGACA+AGG + chr2_4:61178849-61178868 None:intergenic 25.0%
! TTTAATATAGAATGTCCACA+AGG + chr2_4:61179020-61179039 None:intergenic 25.0%
!! TATCATTTAAGATCAAAGGA+TGG + chr2_4:61179118-61179137 None:intergenic 25.0%
! TCCTTTGATCTTAAATGATA+TGG - chr2_4:61179118-61179137 Msa0339910:intron 25.0%
!!! CTGCTTTTTAAACTAGTAAA+TGG - chr2_4:61179175-61179194 Msa0339910:intron 25.0%
!!! TGTATTTTTTAAGGAGAACA+CGG + chr2_4:61179222-61179241 None:intergenic 25.0%
!! TGATCAATCACGTAAATTTT+TGG - chr2_4:61179814-61179833 Msa0339910:CDS 25.0%
!! CTTAAAATATTTTGTGGAAG+GGG - chr2_4:61179867-61179886 Msa0339910:intron 25.0%
!! TTAAAATATTTTGTGGAAGG+GGG - chr2_4:61179868-61179887 Msa0339910:intron 25.0%
! ATCTCTTTCAATCTTCTTTA+AGG - chr2_4:61180373-61180392 Msa0339910:CDS 25.0%
! AAAACATATTAGACAGGAAA+TGG + chr2_4:61180605-61180624 None:intergenic 25.0%
!!! AATTTATGGTTTCTGGTTTA+AGG - chr2_4:61180973-61180992 Msa0339910:intron 25.0%
!!! CAAGATTTTTTGAACAAACA+AGG + chr2_4:61181290-61181309 None:intergenic 25.0%
!! ATTATATTATTATGGCTTGC+TGG - chr2_4:61181380-61181399 Msa0339910:intron 25.0%
!!! TTTTTTCCTGCATTCTATTT+TGG - chr2_4:61181458-61181477 Msa0339910:intron 25.0%
! AGAACAAATACATTATGAGT+GGG + chr2_4:61181811-61181830 None:intergenic 25.0%
! TAGAACAAATACATTATGAG+TGG + chr2_4:61181812-61181831 None:intergenic 25.0%
!!! TCAGTTGTTATTTTTGTTTG+AGG - chr2_4:61181879-61181898 Msa0339910:intron 25.0%
!!! CAGTTGTTATTTTTGTTTGA+GGG - chr2_4:61181880-61181899 Msa0339910:intron 25.0%
!!! ATTATAGTTTTGAGAACAGA+GGG + chr2_4:61182092-61182111 None:intergenic 25.0%
!!! AATTATAGTTTTGAGAACAG+AGG + chr2_4:61182093-61182112 None:intergenic 25.0%
! GATACAATGAAAAAATAGAG+AGG + chr2_4:61182271-61182290 None:intergenic 25.0%
!! ATTGTGGATTACATTAACAA+AGG + chr2_4:61182345-61182364 None:intergenic 25.0%
! AATCCATTTGTCATCAAATT+AGG + chr2_4:61182498-61182517 None:intergenic 25.0%
!! CAATTTTATAAAAATGGAGC+AGG - chr2_4:61182539-61182558 Msa0339910:intron 25.0%
! CAAATTCATGTGTATAACAT+AGG + chr2_4:61182605-61182624 None:intergenic 25.0%
!!! CTTTTGTAGTTTGATTTTTG+AGG - chr2_4:61182796-61182815 Msa0339910:five_prime_UTR 25.0%
TTTGCATCAGATTTCTTCAT+CGG - chr2_4:61175548-61175567 Msa0339910:three_prime_UTR 30.0%
! TTTTCGTTTTCATTCAGAGA+CGG - chr2_4:61175937-61175956 Msa0339910:intron 30.0%
CTACTCAACAATTAAAAAGG+AGG + chr2_4:61176018-61176037 None:intergenic 30.0%
ACGCTACTCAACAATTAAAA+AGG + chr2_4:61176021-61176040 None:intergenic 30.0%
TAATGTGTGGTAAGAATAGT+CGG - chr2_4:61176064-61176083 Msa0339910:CDS 30.0%
ACTTATCATAGGAAAAATGG+TGG - chr2_4:61176124-61176143 Msa0339910:CDS 30.0%
! AGTGTGATTGGAGTATTATA+TGG - chr2_4:61176494-61176513 Msa0339910:intron 30.0%
ACTTCAAGCAACAATTAAAG+AGG + chr2_4:61176825-61176844 None:intergenic 30.0%
ATCTAATCTATTCTCCTTAC+TGG + chr2_4:61177289-61177308 None:intergenic 30.0%
AGTAAGGAGAATAGATTAGA+TGG - chr2_4:61177288-61177307 Msa0339910:intron 30.0%
AGGTTTGTAATATAATTCCC+TGG - chr2_4:61177443-61177462 Msa0339910:CDS 30.0%
! TGAAACAAACATGGTATTGA+TGG + chr2_4:61177495-61177514 None:intergenic 30.0%
! TTTCTTCTATTGTTATTCCC+AGG - chr2_4:61177573-61177592 Msa0339910:intron 30.0%
! ATTGTTATTCCCAGGTTTAA+AGG - chr2_4:61177581-61177600 Msa0339910:CDS 30.0%
ATTCCAACAACAAAAACCAA+GGG + chr2_4:61177799-61177818 None:intergenic 30.0%
AATTCCAACAACAAAAACCA+AGG + chr2_4:61177800-61177819 None:intergenic 30.0%
TGTGTGTATACTCTTAATAC+AGG - chr2_4:61177888-61177907 Msa0339910:intron 30.0%
CTCAAATAAAAGTTCTGCAA+TGG - chr2_4:61177932-61177951 Msa0339910:intron 30.0%
AAACAGGAAAATAACTTCGA+AGG - chr2_4:61177978-61177997 Msa0339910:intron 30.0%
CATACATAAAACAAATGCGT+AGG - chr2_4:61178041-61178060 Msa0339910:intron 30.0%
CAAACGATGGAAATTGATAA+TGG - chr2_4:61178094-61178113 Msa0339910:intron 30.0%
CAATTACAATCTCCATATTG+TGG + chr2_4:61178252-61178271 None:intergenic 30.0%
ACCTATTGTAACTTACACAT+TGG - chr2_4:61178450-61178469 Msa0339910:intron 30.0%
ACCAATGTGTAAGTTACAAT+AGG + chr2_4:61178454-61178473 None:intergenic 30.0%
GTTAGTACAATACCATCTAT+TGG - chr2_4:61178701-61178720 Msa0339910:intron 30.0%
! TAATATTTGAAGATGGTGGT+CGG + chr2_4:61178732-61178751 None:intergenic 30.0%
ATATTAGAAAATGAGCTAGC+TGG - chr2_4:61178746-61178765 Msa0339910:intron 30.0%
! TGGTTTAAAATTGGAACTAC+AGG - chr2_4:61178766-61178785 Msa0339910:intron 30.0%
CATTAGACAAGGAACAAAAA+AGG + chr2_4:61178838-61178857 None:intergenic 30.0%
!!! CTTTTTTGTTCCTTGTCTAA+TGG - chr2_4:61178836-61178855 Msa0339910:intron 30.0%
! GCCATATCATTTAAGATCAA+AGG + chr2_4:61179122-61179141 None:intergenic 30.0%
ATGTCTTATACTTACTAGCT+AGG - chr2_4:61179241-61179260 Msa0339910:intron 30.0%
TAGGTATCAAGAAGATTTCA+TGG + chr2_4:61179329-61179348 None:intergenic 30.0%
GTGTTTATGAACTCAATATC+TGG - chr2_4:61179370-61179389 Msa0339910:CDS 30.0%
TACTGTTTCATTTAAATCGC+TGG - chr2_4:61179601-61179620 Msa0339910:CDS 30.0%
! TTTCATTTAAATCGCTGGTT+AGG - chr2_4:61179606-61179625 Msa0339910:CDS 30.0%
! TAATCTGCTCCTTTTTAATG+TGG - chr2_4:61179682-61179701 Msa0339910:intron 30.0%
TCAAGTATTTAGTACTTCAG+AGG + chr2_4:61179793-61179812 None:intergenic 30.0%
GACAGTTGTAAAATGATGAT+TGG + chr2_4:61179914-61179933 None:intergenic 30.0%
AAAAATACCGTGCAATAATC+AGG - chr2_4:61180195-61180214 Msa0339910:CDS 30.0%
AAATCATCCTGATTATTGCA+CGG + chr2_4:61180205-61180224 None:intergenic 30.0%
!!! ATCAGGATGATTTTTAGTGA+TGG - chr2_4:61180212-61180231 Msa0339910:intron 30.0%
! ACTTGTTTGAGACTTTAAGT+AGG - chr2_4:61180271-61180290 Msa0339910:intron 30.0%
! CTTGGAAGACTAATTTTTAC+TGG - chr2_4:61180331-61180350 Msa0339910:CDS 30.0%
!!! TAGTAGTCACCAAACTTTTT+TGG - chr2_4:61180399-61180418 Msa0339910:intron 30.0%
CAATCTAGTCCAAAAAAGTT+TGG + chr2_4:61180411-61180430 None:intergenic 30.0%
TCTCTCAAATTCATATCAAG+AGG - chr2_4:61180885-61180904 Msa0339910:intron 30.0%
AATTCATATCAAGAGGCAAT+TGG - chr2_4:61180892-61180911 Msa0339910:intron 30.0%
!! ATTTGACTTGTCTTCCAAAT+TGG - chr2_4:61181027-61181046 Msa0339910:intron 30.0%
!! TTTGACTTGTCTTCCAAATT+GGG - chr2_4:61181028-61181047 Msa0339910:intron 30.0%
!! GGATCCTATCATTTTTCTTT+CGG - chr2_4:61181088-61181107 Msa0339910:intron 30.0%
!! GATCCTATCATTTTTCTTTC+GGG - chr2_4:61181089-61181108 Msa0339910:intron 30.0%
!! ATCCTATCATTTTTCTTTCG+GGG - chr2_4:61181090-61181109 Msa0339910:intron 30.0%
TGACTTAGAATTTAGTGATG+TGG - chr2_4:61181168-61181187 Msa0339910:intron 30.0%
TTTATCTGGGAATAGTTCAA+AGG - chr2_4:61181195-61181214 Msa0339910:intron 30.0%
CACTTGACAAATTAATACAC+TGG - chr2_4:61181313-61181332 Msa0339910:intron 30.0%
! GATTCTAGAAAAATTACGAG+TGG - chr2_4:61181682-61181701 Msa0339910:intron 30.0%
GAACAAATACATTATGAGTG+GGG + chr2_4:61181810-61181829 None:intergenic 30.0%
TAACAACTGACTACTAACAT+TGG + chr2_4:61181869-61181888 None:intergenic 30.0%
!!! TTGTTATTTTTGTTTGAGGG+AGG - chr2_4:61181883-61181902 Msa0339910:intron 30.0%
! ATCCACAATTTTGCAGTTAT+AGG - chr2_4:61182356-61182375 Msa0339910:intron 30.0%
! AGTCCTAATTTGATGACAAA+TGG - chr2_4:61182492-61182511 Msa0339910:CDS 30.0%
!!! TATTGTGAAACCCTTTTTTC+TGG - chr2_4:61182733-61182752 Msa0339910:five_prime_UTR 30.0%
TACACATCTTCCAGAAAAAA+GGG + chr2_4:61182746-61182765 None:intergenic 30.0%
ATACACATCTTCCAGAAAAA+AGG + chr2_4:61182747-61182766 None:intergenic 30.0%
TGAAGATGAAAGGTGAGAAA+TGG + chr2_4:61175706-61175725 None:intergenic 35.0%
TTGAATGCGTTTATAGCTTG+AGG - chr2_4:61175759-61175778 Msa0339910:three_prime_UTR 35.0%
! TGATTTGGGAAACGAAAAAG+TGG + chr2_4:61175910-61175929 None:intergenic 35.0%
AAGATGTTGCGTTTAATGTG+TGG - chr2_4:61176051-61176070 Msa0339910:intron 35.0%
AATGTGTGGTAAGAATAGTC+GGG - chr2_4:61176065-61176084 Msa0339910:CDS 35.0%
TATCATAGGAAAAATGGTGG+AGG - chr2_4:61176127-61176146 Msa0339910:CDS 35.0%
TCTCCTTACTAGAGAATCTA+AGG + chr2_4:61176637-61176656 None:intergenic 35.0%
AGTAAGGAGAATAGATCAGA+TGG - chr2_4:61176647-61176666 Msa0339910:CDS 35.0%
CAAAGATGAGAATGTTGTGT+TGG - chr2_4:61176857-61176876 Msa0339910:intron 35.0%
!! TAAACACAAGGGTTTGTTAG+GGG + chr2_4:61177047-61177066 None:intergenic 35.0%
!! CTAAACACAAGGGTTTGTTA+GGG + chr2_4:61177048-61177067 None:intergenic 35.0%
TTTAGATTGAGGGTTTAGGA+GGG + chr2_4:61177250-61177269 None:intergenic 35.0%
TGTGTTTAGATTGAGGGTTT+AGG + chr2_4:61177254-61177273 None:intergenic 35.0%
! TAAGGGTGTGTTTAGATTGA+GGG + chr2_4:61177260-61177279 None:intergenic 35.0%
ATTTCCAATCTCACATTCCA+GGG + chr2_4:61177463-61177482 None:intergenic 35.0%
TCATGTGTAAATGACATTCC+CGG + chr2_4:61177553-61177572 None:intergenic 35.0%
TTATTCCCAGGTTTAAAGGA+TGG - chr2_4:61177585-61177604 Msa0339910:CDS 35.0%
TATTCCCAGGTTTAAAGGAT+GGG - chr2_4:61177586-61177605 Msa0339910:CDS 35.0%
AATTCCCATCCTTTAAACCT+GGG + chr2_4:61177593-61177612 None:intergenic 35.0%
AAATTCCCATCCTTTAAACC+TGG + chr2_4:61177594-61177613 None:intergenic 35.0%
!!! GCAACTTTAGTTTTATTCCC+AGG + chr2_4:61177623-61177642 None:intergenic 35.0%
! TTTTTACCAAACACATGGGT+AGG - chr2_4:61177728-61177747 Msa0339910:intron 35.0%
AGGCAAAAACTTACATTCCA+AGG + chr2_4:61177763-61177782 None:intergenic 35.0%
! ATGAGTTGGATGAAGAAAAC+AGG - chr2_4:61177962-61177981 Msa0339910:intron 35.0%
GAAAATAACTTCGAAGGTGA+AGG - chr2_4:61177984-61178003 Msa0339910:intron 35.0%
AATGAACTGGTAAGCAGAAA+GGG - chr2_4:61178136-61178155 Msa0339910:intron 35.0%
! AAAGGGTTGACAGTGAATTT+TGG - chr2_4:61178153-61178172 Msa0339910:intron 35.0%
TTGTGGAGTGAGAAGTAATT+AGG + chr2_4:61178235-61178254 None:intergenic 35.0%
TTACTTCTCACTCCACAATA+TGG - chr2_4:61178237-61178256 Msa0339910:intron 35.0%
ATCCTTAAGACGTTTCTTCA+GGG + chr2_4:61178506-61178525 None:intergenic 35.0%
! CTTATTGGCTATCTTGTTCT+AGG - chr2_4:61178610-61178629 Msa0339910:intron 35.0%
! AATATTTGAAGATGGTGGTC+GGG + chr2_4:61178731-61178750 None:intergenic 35.0%
! TGAGCTAGCTGGTTTAAAAT+TGG - chr2_4:61178757-61178776 Msa0339910:intron 35.0%
ATTAAACTCCATGTCAAGAG+AGG - chr2_4:61178973-61178992 Msa0339910:intron 35.0%
GCAATCAGTTATGTAAGTTG+TGG - chr2_4:61179072-61179091 Msa0339910:intron 35.0%
! ATGTAAGTTGTGGCTCTTTT+TGG - chr2_4:61179082-61179101 Msa0339910:intron 35.0%
!!! ATTTTTTAAGGAGAACACGG+TGG + chr2_4:61179219-61179238 None:intergenic 35.0%
TTATACTTACTAGCTAGGAG+TGG - chr2_4:61179246-61179265 Msa0339910:intron 35.0%
TAGTTGAAATCACCAGTTAC+CGG + chr2_4:61179275-61179294 None:intergenic 35.0%
AAGGCAAATGCAATGAGAAA+TGG + chr2_4:61179398-61179417 None:intergenic 35.0%
ATTTGCCTTGATATTCCTTC+TGG - chr2_4:61179409-61179428 Msa0339910:CDS 35.0%
TACAACCAGAAGGAATATCA+AGG + chr2_4:61179417-61179436 None:intergenic 35.0%
! GATATTCCTTCTGGTTGTAT+TGG - chr2_4:61179418-61179437 Msa0339910:CDS 35.0%
! TGTATTGGTGCACTATAACA+TGG - chr2_4:61179433-61179452 Msa0339910:intron 35.0%
TATAACATGGAATTGACCCT+GGG - chr2_4:61179446-61179465 Msa0339910:intron 35.0%
AACTCAGAAGACATTCACTA+TGG - chr2_4:61179499-61179518 Msa0339910:intron 35.0%
AATCTTCACATTCAAGAGTG+AGG + chr2_4:61179657-61179676 None:intergenic 35.0%
ATTATTGAAAGCTGTCCAAG+AGG + chr2_4:61180009-61180028 None:intergenic 35.0%
TTTACTGCCATCTAGTCATA+AGG - chr2_4:61180243-61180262 Msa0339910:intron 35.0%
GTTGTAACCTTATGACTAGA+TGG + chr2_4:61180253-61180272 None:intergenic 35.0%
! TGTTTGAGACTTTAAGTAGG+TGG - chr2_4:61180274-61180293 Msa0339910:intron 35.0%
TAAGTAGGTGGAAAATAACG+CGG - chr2_4:61180286-61180305 Msa0339910:intron 35.0%
! ACTAATTTTTACTGGTCGTC+TGG - chr2_4:61180339-61180358 Msa0339910:CDS 35.0%
! GTCTTCTTGTTATCCATCAT+TGG - chr2_4:61180535-61180554 Msa0339910:intron 35.0%
!! GTTATCCATCATTGGTGTTT+TGG - chr2_4:61180543-61180562 Msa0339910:intron 35.0%
ATTAGACAGGAAATGGTGTT+GGG + chr2_4:61180598-61180617 None:intergenic 35.0%
TATTAGACAGGAAATGGTGT+TGG + chr2_4:61180599-61180618 None:intergenic 35.0%
CTTCCTGAAATTCAGGAAAA+GGG + chr2_4:61180641-61180660 None:intergenic 35.0%
TCTTCCTGAAATTCAGGAAA+AGG + chr2_4:61180642-61180661 None:intergenic 35.0%
TGATAAGCAGTTGCATGATA+TGG - chr2_4:61180674-61180693 Msa0339910:intron 35.0%
CAGTAGACAGAAACTTCTAA+TGG - chr2_4:61180722-61180741 Msa0339910:intron 35.0%
TAGACAGAAACTTCTAATGG+AGG - chr2_4:61180725-61180744 Msa0339910:intron 35.0%
GTATATTCCATCTGATAGAG+TGG - chr2_4:61180789-61180808 Msa0339910:intron 35.0%
ACCAGGTAACAATCAATATC+TGG - chr2_4:61180935-61180954 Msa0339910:intron 35.0%
! TCCAGATATTGATTGTTACC+TGG + chr2_4:61180939-61180958 None:intergenic 35.0%
TAGGGAAGAATTTCCCAATT+TGG + chr2_4:61181044-61181063 None:intergenic 35.0%
AGTGATGTGGTAGATTTATC+TGG - chr2_4:61181181-61181200 Msa0339910:intron 35.0%
GTGATGTGGTAGATTTATCT+GGG - chr2_4:61181182-61181201 Msa0339910:intron 35.0%
CAAACAAGGATATTCATCTC+TGG + chr2_4:61181276-61181295 None:intergenic 35.0%
! CTTTCTATTACTGTGTTGAC+CGG - chr2_4:61181610-61181629 Msa0339910:intron 35.0%
AGAAAAATTACGAGTGGAAC+AGG - chr2_4:61181688-61181707 Msa0339910:intron 35.0%
! ACATATGGATTGAAGAGCTA+AGG + chr2_4:61181926-61181945 None:intergenic 35.0%
AATTGACAACAGGAGTCATA+AGG + chr2_4:61181963-61181982 None:intergenic 35.0%
GGATAACATGAATTGACAAC+AGG + chr2_4:61181973-61181992 None:intergenic 35.0%
AATTCATGTTATCCCCTTGT+TGG - chr2_4:61181979-61181998 Msa0339910:intron 35.0%
ATTCATGTTATCCCCTTGTT+GGG - chr2_4:61181980-61181999 Msa0339910:intron 35.0%
AATTGAACGGGAGTAGAATA+AGG + chr2_4:61182122-61182141 None:intergenic 35.0%
CAAGTCAAACAAGCATATGA+TGG - chr2_4:61182226-61182245 Msa0339910:intron 35.0%
AATGAAGCAAGACAGTTCAT+TGG - chr2_4:61182414-61182433 Msa0339910:intron 35.0%
! GTTCATTGGTTGTACGATAA+TGG - chr2_4:61182428-61182447 Msa0339910:intron 35.0%
AAAGAACAGGCACTAACAAA+TGG - chr2_4:61182660-61182679 Msa0339910:CDS 35.0%
AAGAACAGGCACTAACAAAT+GGG - chr2_4:61182661-61182680 Msa0339910:CDS 35.0%
AAGATGTGTATCCTCGTTAT+AGG - chr2_4:61182756-61182775 Msa0339910:five_prime_UTR 35.0%
AGATGTGTATCCTCGTTATA+GGG - chr2_4:61182757-61182776 Msa0339910:five_prime_UTR 35.0%
CATGCAACTAACTTTGCTTC+AGG - chr2_4:61175495-61175514 Msa0339910:three_prime_UTR 40.0%
TCATCGGTAGAAAAACCCAA+AGG - chr2_4:61175564-61175583 Msa0339910:three_prime_UTR 40.0%
CATCGGTAGAAAAACCCAAA+GGG - chr2_4:61175565-61175584 Msa0339910:three_prime_UTR 40.0%
ATCGGTAGAAAAACCCAAAG+GGG - chr2_4:61175566-61175585 Msa0339910:three_prime_UTR 40.0%
TGGAAGAGAGATGAAGAAAG+AGG + chr2_4:61175686-61175705 None:intergenic 40.0%
! AATTCGTCAAAAGAGAGCAC+AGG - chr2_4:61175783-61175802 Msa0339910:three_prime_UTR 40.0%
! AAAGAGAGCACAGGATAGAT+TGG - chr2_4:61175792-61175811 Msa0339910:three_prime_UTR 40.0%
! TTTGAAACGACAGAGTTGAG+TGG - chr2_4:61176094-61176113 Msa0339910:CDS 40.0%
!! TTTCCATGGAGCATTTTGGA+GGG - chr2_4:61176195-61176214 Msa0339910:intron 40.0%
!!! TTTTTTCGGATGGGTGACTA+TGG + chr2_4:61176355-61176374 None:intergenic 40.0%
!!! TTGTTTGGGAGGGGTTTTTT+CGG + chr2_4:61176369-61176388 None:intergenic 40.0%
TCAATCCAAACACTCCCTAA+GGG + chr2_4:61176393-61176412 None:intergenic 40.0%
!! TTAGGGAGTGTTTGGATTGA+GGG - chr2_4:61176393-61176412 Msa0339910:intron 40.0%
AGTGTTTGGATTGAGGGTTT+AGG - chr2_4:61176399-61176418 Msa0339910:intron 40.0%
TTTGGATTGAGGGTTTAGGA+GGG - chr2_4:61176403-61176422 Msa0339910:intron 40.0%
AATCTAAGGACGTGTTTGGA+TGG + chr2_4:61176623-61176642 None:intergenic 40.0%
AGAGAATCTAAGGACGTGTT+TGG + chr2_4:61176627-61176646 None:intergenic 40.0%
CGTCCTTAGATTCTCTAGTA+AGG - chr2_4:61176631-61176650 Msa0339910:CDS 40.0%
TGATAGAACAAGCCTGAGAA+CGG - chr2_4:61176766-61176785 Msa0339910:intron 40.0%
GAGAATCTATTTCCGTTCTC+AGG + chr2_4:61176781-61176800 None:intergenic 40.0%
GAGAGTAGAAATTACCTGAG+AGG + chr2_4:61176803-61176822 None:intergenic 40.0%
TGAGAATGTTGTGTTGGATG+TGG - chr2_4:61176863-61176882 Msa0339910:intron 40.0%
GAGAATGTTGTGTTGGATGT+GGG - chr2_4:61176864-61176883 Msa0339910:intron 40.0%
AGAATGTTGTGTTGGATGTG+GGG - chr2_4:61176865-61176884 Msa0339910:intron 40.0%
!! AAACACAAGGGTTTGTTAGG+GGG + chr2_4:61177046-61177065 None:intergenic 40.0%
! CCTAAACACAAGGGTTTGTT+AGG + chr2_4:61177049-61177068 None:intergenic 40.0%
CCTAACAAACCCTTGTGTTT+AGG - chr2_4:61177046-61177065 Msa0339910:intron 40.0%
AACAAACCCTTGTGTTTAGG+AGG - chr2_4:61177049-61177068 Msa0339910:intron 40.0%
ACAAACCCTTGTGTTTAGGA+GGG - chr2_4:61177050-61177069 Msa0339910:intron 40.0%
TTAGATTGAGGGTTTAGGAG+GGG + chr2_4:61177249-61177268 None:intergenic 40.0%
GTTTAGATTGAGGGTTTAGG+AGG + chr2_4:61177251-61177270 None:intergenic 40.0%
! CTAAGGGTGTGTTTAGATTG+AGG + chr2_4:61177261-61177280 None:intergenic 40.0%
CTCCTTACTGGAGAATCTAA+GGG + chr2_4:61177277-61177296 None:intergenic 40.0%
TCTCCTTACTGGAGAATCTA+AGG + chr2_4:61177278-61177297 None:intergenic 40.0%
! AAGTTTTACCCCACTAAGTG+GGG + chr2_4:61177406-61177425 None:intergenic 40.0%
! CAAGTTTTACCCCACTAAGT+GGG + chr2_4:61177407-61177426 None:intergenic 40.0%
CACTTAGTGGGGTAAAACTT+GGG - chr2_4:61177406-61177425 Msa0339910:CDS 40.0%
ACTTAGTGGGGTAAAACTTG+GGG - chr2_4:61177407-61177426 Msa0339910:CDS 40.0%
!!! CTTGGGGTGTGTTTGTTTTA+AGG - chr2_4:61177423-61177442 Msa0339910:CDS 40.0%
AATTCCCTGGAATGTGAGAT+TGG - chr2_4:61177456-61177475 Msa0339910:CDS 40.0%
CATTTCCAATCTCACATTCC+AGG + chr2_4:61177464-61177483 None:intergenic 40.0%
TCCCAGGAATGTTATATTCC+CGG - chr2_4:61177531-61177550 Msa0339910:intron 40.0%
CATGTGTAAATGACATTCCC+GGG + chr2_4:61177552-61177571 None:intergenic 40.0%
GATGGGAATTTGACATTCCT+GGG - chr2_4:61177603-61177622 Msa0339910:CDS 40.0%
AACATTCCTACCCATGTGTT+TGG + chr2_4:61177737-61177756 None:intergenic 40.0%
TGGGTAGGAATGTTATTCCT+TGG - chr2_4:61177743-61177762 Msa0339910:intron 40.0%
!! ACACCCTTGGTTTTTGTTGT+TGG - chr2_4:61177793-61177812 Msa0339910:intron 40.0%
GCAATGGAAGAACAATGAGT+TGG - chr2_4:61177948-61177967 Msa0339910:intron 40.0%
ATTGTTGCAGCTTCAAACGA+TGG - chr2_4:61178081-61178100 Msa0339910:intron 40.0%
GAATGAACTGGTAAGCAGAA+AGG - chr2_4:61178135-61178154 Msa0339910:intron 40.0%
ATTCCTGCAGGAGCAAAATA+CGG - chr2_4:61178309-61178328 Msa0339910:intron 40.0%
!! AAAATACGGTGCCATCTCTT+AGG - chr2_4:61178323-61178342 Msa0339910:intron 40.0%
ATCTCTTAGGAAAGCTCTCA+GGG - chr2_4:61178336-61178355 Msa0339910:intron 40.0%
TGTAACTTACACATTGGTGC+AGG - chr2_4:61178456-61178475 Msa0339910:intron 40.0%
TACCCTGAAGAAACGTCTTA+AGG - chr2_4:61178501-61178520 Msa0339910:intron 40.0%
CATCCTTAAGACGTTTCTTC+AGG + chr2_4:61178507-61178526 None:intergenic 40.0%
AAGAGGAGCAATATCGTGTA+TGG - chr2_4:61178530-61178549 Msa0339910:intron 40.0%
AGAGGAGCAATATCGTGTAT+GGG - chr2_4:61178531-61178550 Msa0339910:intron 40.0%
! ATTGGCTATCTTGTTCTAGG+CGG - chr2_4:61178613-61178632 Msa0339910:intron 40.0%
GATGTCTGAAAAGCAAGAGT+TGG - chr2_4:61178943-61178962 Msa0339910:intron 40.0%
GTTCTGCTCATAAATCCTTG+TGG - chr2_4:61179002-61179021 Msa0339910:intron 40.0%
AGTTGAAATCACCAGTTACC+GGG + chr2_4:61179274-61179293 None:intergenic 40.0%
TTGCTAGAGAAAAGGACTCT+AGG + chr2_4:61179348-61179367 None:intergenic 40.0%
! TAGAGTCCTTTTCTCTAGCA+AGG - chr2_4:61179347-61179366 Msa0339910:CDS 40.0%
! AGAGTCCTTTTCTCTAGCAA+GGG - chr2_4:61179348-61179367 Msa0339910:CDS 40.0%
AAACACCCTTGCTAGAGAAA+AGG + chr2_4:61179356-61179375 None:intergenic 40.0%
CTATAACATGGAATTGACCC+TGG - chr2_4:61179445-61179464 Msa0339910:intron 40.0%
TTCTGCATGAACAAAACCCA+GGG + chr2_4:61179465-61179484 None:intergenic 40.0%
TTTGTTCATGCAGAAGTCTC+AGG - chr2_4:61179470-61179489 Msa0339910:intron 40.0%
AGAAGACATTCACTATGGTG+AGG - chr2_4:61179504-61179523 Msa0339910:intron 40.0%
GGACAGAGAACAAATCATCT+AGG + chr2_4:61179938-61179957 None:intergenic 40.0%
GCTTGACTTTGTAACCTCAA+CGG + chr2_4:61179959-61179978 None:intergenic 40.0%
GTGTGAGTTTAGTAGCTTAG+TGG + chr2_4:61179987-61180006 None:intergenic 40.0%
GAGTCAAAATGAAGTCAGCT+TGG - chr2_4:61180313-61180332 Msa0339910:intron 40.0%
AGTTGCCAAAACACCAATGA+TGG + chr2_4:61180551-61180570 None:intergenic 40.0%
!!! ATCATTGGTGTTTTGGCAAC+TGG - chr2_4:61180550-61180569 Msa0339910:intron 40.0%
! TTAGACAGGAAATGGTGTTG+GGG + chr2_4:61180597-61180616 None:intergenic 40.0%
! TCACCCTTTTCCTGAATTTC+AGG - chr2_4:61180635-61180654 Msa0339910:intron 40.0%
TGCTTGTCTTCCTGAAATTC+AGG + chr2_4:61180648-61180667 None:intergenic 40.0%
ATTCCATCTGATAGAGTGGT+TGG - chr2_4:61180793-61180812 Msa0339910:intron 40.0%
AAACCAACCACTCTATCAGA+TGG + chr2_4:61180799-61180818 None:intergenic 40.0%
!! TGGTTGGTTTGTCATCTTGT+TGG - chr2_4:61180809-61180828 Msa0339910:intron 40.0%
GACCCCGAAAGAAAAATGAT+AGG + chr2_4:61181095-61181114 None:intergenic 40.0%
GAAAACCACCTCTCAGAATA+AGG + chr2_4:61181425-61181444 None:intergenic 40.0%
TCTTGGCCAAAATAGAATGC+AGG + chr2_4:61181467-61181486 None:intergenic 40.0%
!!! CATTCTATTTTGGCCAAGAC+TGG - chr2_4:61181468-61181487 Msa0339910:intron 40.0%
CTGTGCTGAGATCTTTGTTA+GGG - chr2_4:61181538-61181557 Msa0339910:intron 40.0%
! AATGGATTCTGGTAAGCCAT+TGG + chr2_4:61181714-61181733 None:intergenic 40.0%
ACCAGAATCCATTAAGAACG+AGG - chr2_4:61181721-61181740 Msa0339910:intron 40.0%
!! ACCTCGTTCTTAATGGATTC+TGG + chr2_4:61181725-61181744 None:intergenic 40.0%
! TATGGATTGAAGAGCTAAGG+AGG + chr2_4:61181923-61181942 None:intergenic 40.0%
CAAGGAACTGTGTTTCATTG+AGG - chr2_4:61182065-61182084 Msa0339910:intron 40.0%
AACGGGAGTAGAATAAGGAA+CGG + chr2_4:61182117-61182136 None:intergenic 40.0%
GGCCTATAACTGCAAAATTG+TGG + chr2_4:61182361-61182380 None:intergenic 40.0%
AGAACAGGCACTAACAAATG+GGG - chr2_4:61182662-61182681 Msa0339910:exon 40.0%
TTGTTATGCACCCTATAACG+AGG + chr2_4:61182770-61182789 None:intergenic 40.0%
! AGATTGGTCAAAGCCTCTTC+TGG - chr2_4:61175808-61175827 Msa0339910:three_prime_UTR 45.0%
TTCGCAGCGATAATACTGAC+CGG + chr2_4:61175863-61175882 None:intergenic 45.0%
GTGGTAAGAATAGTCGGGAT+AGG - chr2_4:61176070-61176089 Msa0339910:CDS 45.0%
GTGGTGGCAGTACTTATCAT+AGG - chr2_4:61176113-61176132 Msa0339910:CDS 45.0%
!!! TCGACTTAGCTGGTTTTGAG+GGG + chr2_4:61176174-61176193 None:intergenic 45.0%
!!! CTCGACTTAGCTGGTTTTGA+GGG + chr2_4:61176175-61176194 None:intergenic 45.0%
!!! ACTCGACTTAGCTGGTTTTG+AGG + chr2_4:61176176-61176195 None:intergenic 45.0%
!! CGAGTTTCCATGGAGCATTT+TGG - chr2_4:61176191-61176210 Msa0339910:intron 45.0%
!! GTTTCCATGGAGCATTTTGG+AGG - chr2_4:61176194-61176213 Msa0339910:intron 45.0%
!! TTCCATGGAGCATTTTGGAG+GGG - chr2_4:61176196-61176215 Msa0339910:intron 45.0%
! CACTCCCTAAGGGTTTGTTT+GGG + chr2_4:61176383-61176402 None:intergenic 45.0%
! ACACTCCCTAAGGGTTTGTT+TGG + chr2_4:61176384-61176403 None:intergenic 45.0%
!! ACAAACCCTTAGGGAGTGTT+TGG - chr2_4:61176385-61176404 Msa0339910:intron 45.0%
CTCAATCCAAACACTCCCTA+AGG + chr2_4:61176394-61176413 None:intergenic 45.0%
!! CTTAGGGAGTGTTTGGATTG+AGG - chr2_4:61176392-61176411 Msa0339910:intron 45.0%
GTTTGGATTGAGGGTTTAGG+AGG - chr2_4:61176402-61176421 Msa0339910:intron 45.0%
TTGGATTGAGGGTTTAGGAG+GGG - chr2_4:61176404-61176423 Msa0339910:intron 45.0%
TTTGGATGGAGGGTTTAGGA+GGG + chr2_4:61176609-61176628 None:intergenic 45.0%
TAAGGACGTGTTTGGATGGA+GGG + chr2_4:61176619-61176638 None:intergenic 45.0%
CGGAAATAGATTCTCCTCTC+AGG - chr2_4:61176786-61176805 Msa0339910:intron 45.0%
CAAACCCTTGTGTTTAGGAG+GGG - chr2_4:61177051-61177070 Msa0339910:intron 45.0%
CACCCTTAGATTCTCCAGTA+AGG - chr2_4:61177272-61177291 Msa0339910:intron 45.0%
ATTAAGTCTTCCTCTGCGTC+AGG + chr2_4:61177328-61177347 None:intergenic 45.0%
CAGAGGAAGACTTAATGAGC+TGG - chr2_4:61177332-61177351 Msa0339910:intron 45.0%
! CCAAGTTTTACCCCACTAAG+TGG + chr2_4:61177408-61177427 None:intergenic 45.0%
CCACTTAGTGGGGTAAAACT+TGG - chr2_4:61177405-61177424 Msa0339910:CDS 45.0%
CCCGGGAATATAACATTCCT+GGG + chr2_4:61177535-61177554 None:intergenic 45.0%
CCCAGGAATGTTATATTCCC+GGG - chr2_4:61177532-61177551 Msa0339910:intron 45.0%
TCCCGGGAATATAACATTCC+TGG + chr2_4:61177536-61177555 None:intergenic 45.0%
GGATGGGAATTTGACATTCC+TGG - chr2_4:61177602-61177621 Msa0339910:CDS 45.0%
! CCAAGGGTGTGTTTGTTTCA+AGG + chr2_4:61177783-61177802 None:intergenic 45.0%
CCTTGAAACAAACACACCCT+TGG - chr2_4:61177780-61177799 Msa0339910:intron 45.0%
GCACAAGCAGTTGAATGAAC+TGG - chr2_4:61178123-61178142 Msa0339910:intron 45.0%
AAGCCCAATTTGATTCCTGC+AGG - chr2_4:61178297-61178316 Msa0339910:intron 45.0%
GCTCCTGCAGGAATCAAATT+GGG + chr2_4:61178303-61178322 None:intergenic 45.0%
TGCTCCTGCAGGAATCAAAT+TGG + chr2_4:61178304-61178323 None:intergenic 45.0%
CTGAGAGCTTTCCTAAGAGA+TGG + chr2_4:61178337-61178356 None:intergenic 45.0%
CATCTCTTAGGAAAGCTCTC+AGG - chr2_4:61178335-61178354 Msa0339910:intron 45.0%
AACTTACACATTGGTGCAGG+AGG - chr2_4:61178459-61178478 Msa0339910:intron 45.0%
ACGTCTTAAGGATGCTGAAG+AGG - chr2_4:61178513-61178532 Msa0339910:intron 45.0%
CAGACATCAGTGATGCAATG+CGG + chr2_4:61178931-61178950 None:intergenic 45.0%
GTTGAAATCACCAGTTACCG+GGG + chr2_4:61179273-61179292 None:intergenic 45.0%
AGTGCACCAATACAACCAGA+AGG + chr2_4:61179427-61179446 None:intergenic 45.0%
CTTCTGCATGAACAAAACCC+AGG + chr2_4:61179466-61179485 None:intergenic 45.0%
! CTCCTTTTTAATGTGGCGCA+TGG - chr2_4:61179689-61179708 Msa0339910:intron 45.0%
AGCCATGCGCCACATTAAAA+AGG + chr2_4:61179694-61179713 None:intergenic 45.0%
! GATTTGTTCTCTGTCCGTTG+AGG - chr2_4:61179942-61179961 Msa0339910:CDS 45.0%
GCTACTAAACTCACACCTCT+TGG - chr2_4:61179991-61180010 Msa0339910:intron 45.0%
TAGGTGGAAAATAACGCGGA+GGG - chr2_4:61180290-61180309 Msa0339910:intron 45.0%
! TTTTACTGGTCGTCTGGTTG+AGG - chr2_4:61180345-61180364 Msa0339910:CDS 45.0%
TTTACTGGTCGTCTGGTTGA+GGG - chr2_4:61180346-61180365 Msa0339910:CDS 45.0%
! TAGACAGGAAATGGTGTTGG+GGG + chr2_4:61180596-61180615 None:intergenic 45.0%
ATATGGCGTTAGCTGTAGAG+AGG - chr2_4:61180691-61180710 Msa0339910:intron 45.0%
AATTGGAGCAGCAGCAAGAT+GGG - chr2_4:61180909-61180928 Msa0339910:intron 45.0%
AGGTCTCATATATGCAGCCT+TGG - chr2_4:61180993-61181012 Msa0339910:intron 45.0%
!! ATGCAGAGCCTTATTCTGAG+AGG - chr2_4:61181414-61181433 Msa0339910:intron 45.0%
GCTGTGCTGAGATCTTTGTT+AGG - chr2_4:61181537-61181556 Msa0339910:intron 45.0%
AAGCAAAATGAAGAGCTGCG+TGG - chr2_4:61181659-61181678 Msa0339910:intron 45.0%
AGCAAAATGAAGAGCTGCGT+GGG - chr2_4:61181660-61181679 Msa0339910:intron 45.0%
CTCGTGTACCTCGTTCTTAA+TGG + chr2_4:61181732-61181751 None:intergenic 45.0%
CATTAAGAACGAGGTACACG+AGG - chr2_4:61181730-61181749 Msa0339910:intron 45.0%
! GTGGTTTGGGGAGAAACATA+TGG + chr2_4:61181941-61181960 None:intergenic 45.0%
AGGAGTCATAAGGTGGTTTG+GGG + chr2_4:61181953-61181972 None:intergenic 45.0%
CAGGAGTCATAAGGTGGTTT+GGG + chr2_4:61181954-61181973 None:intergenic 45.0%
ACAGGAGTCATAAGGTGGTT+TGG + chr2_4:61181955-61181974 None:intergenic 45.0%
TGACAACAGGAGTCATAAGG+TGG + chr2_4:61181960-61181979 None:intergenic 45.0%
TCTACTCCCGTTCAATTGCT+TGG - chr2_4:61182125-61182144 Msa0339910:intron 45.0%
TGCTCAGTTCCTTCACAAGT+TGG + chr2_4:61182156-61182175 None:intergenic 45.0%
GTTTCAGTAACTGGCTGTGA+CGG - chr2_4:61182564-61182583 Msa0339910:intron 45.0%
TTTCAGTAACTGGCTGTGAC+GGG - chr2_4:61182565-61182584 Msa0339910:intron 45.0%
!! TCAAATATAAAAATAATAAA+AGG + chr2_4:61179766-61179785 None:intergenic 5.0%
GGTAGAAAAACCCAAAGGGG+CGG - chr2_4:61175569-61175588 Msa0339910:three_prime_UTR 50.0%
TGCATCTCTAGGTCGACGAA+CGG - chr2_4:61175654-61175673 Msa0339910:three_prime_UTR 50.0%
GCTTAGATCTGGTCCAGAAG+AGG + chr2_4:61175824-61175843 None:intergenic 50.0%
TTCTGGACCAGATCTAAGCC+AGG - chr2_4:61175825-61175844 Msa0339910:three_prime_UTR 50.0%
TAATACTGACCGGGGATGGT+CGG + chr2_4:61175853-61175872 None:intergenic 50.0%
TCGCAGCGATAATACTGACC+GGG + chr2_4:61175862-61175881 None:intergenic 50.0%
! CGTTTTCATTCAGAGACGGC+TGG - chr2_4:61175941-61175960 Msa0339910:intron 50.0%
GGAGAGTCTATTTCCGCTCT+CGG + chr2_4:61175978-61175997 None:intergenic 50.0%
CGGAAATAGACTCTCCTCTC+AGG - chr2_4:61175982-61176001 Msa0339910:intron 50.0%
GAAACGACAGAGTTGAGTGG+TGG - chr2_4:61176097-61176116 Msa0339910:CDS 50.0%
CCATGGAAACTCGACTTAGC+TGG + chr2_4:61176184-61176203 None:intergenic 50.0%
CCAGCTAAGTCGAGTTTCCA+TGG - chr2_4:61176181-61176200 Msa0339910:intron 50.0%
!! ATGGAGCATTTTGGAGGGGA+GGG - chr2_4:61176200-61176219 Msa0339910:intron 50.0%
!!! TGGGAGGGGTTTTTTCGGAT+GGG + chr2_4:61176364-61176383 None:intergenic 50.0%
!!! TTGGGAGGGGTTTTTTCGGA+TGG + chr2_4:61176365-61176384 None:intergenic 50.0%
! CCTAAGGGTTTGTTTGGGAG+GGG + chr2_4:61176378-61176397 None:intergenic 50.0%
! CCCTAAGGGTTTGTTTGGGA+GGG + chr2_4:61176379-61176398 None:intergenic 50.0%
CCCTCCCAAACAAACCCTTA+GGG - chr2_4:61176376-61176395 Msa0339910:intron 50.0%
! TCCCTAAGGGTTTGTTTGGG+AGG + chr2_4:61176380-61176399 None:intergenic 50.0%
ATTGAGGGTTTAGGAGGGGA+AGG - chr2_4:61176408-61176427 Msa0339910:intron 50.0%
TTGAGGGTTTAGGAGGGGAA+GGG - chr2_4:61176409-61176428 Msa0339910:intron 50.0%
TTGGATGGAGGGTTTAGGAG+GGG + chr2_4:61176608-61176627 None:intergenic 50.0%
GTTTGGATGGAGGGTTTAGG+AGG + chr2_4:61176610-61176629 None:intergenic 50.0%
CGTGTTTGGATGGAGGGTTT+AGG + chr2_4:61176613-61176632 None:intergenic 50.0%
CTAAGGACGTGTTTGGATGG+AGG + chr2_4:61176620-61176639 None:intergenic 50.0%
GGATGTGGGGTAAGACTAGT+CGG - chr2_4:61176878-61176897 Msa0339910:intron 50.0%
! GATGTGGGGTAAGACTAGTC+GGG - chr2_4:61176879-61176898 Msa0339910:intron 50.0%
! GGGTAAGACTAGTCGGGATA+GGG - chr2_4:61176885-61176904 Msa0339910:intron 50.0%
TTGAGGGTTTAGGAGGGGAA+GGG + chr2_4:61176409-61176428 None:intergenic 50.0%
ATTGAGGGTTTAGGAGGGGA+AGG + chr2_4:61176408-61176427 None:intergenic 50.0%
AGTCAAATCACCTGACGCAG+AGG - chr2_4:61177315-61177334 Msa0339910:intron 50.0%
TTTACCCCACTAAGTGGGGT+CGG + chr2_4:61177402-61177421 None:intergenic 50.0%
AGCTCTCAGGGATGTTGCAA+TGG - chr2_4:61178348-61178367 Msa0339910:intron 50.0%
! ATTTGAAGATGGTGGTCGGG+TGG + chr2_4:61178728-61178747 None:intergenic 50.0%
TACAGCGTGAGTCACTGATG+AGG - chr2_4:61178870-61178889 Msa0339910:intron 50.0%
TAGCTAACTGTTCTTGCCCC+TGG + chr2_4:61178898-61178917 None:intergenic 50.0%
GTAGGTGGAAAATAACGCGG+AGG - chr2_4:61180289-61180308 Msa0339910:intron 50.0%
AGGTGGAAAATAACGCGGAG+GGG - chr2_4:61180291-61180310 Msa0339910:intron 50.0%
TTACTGGTCGTCTGGTTGAG+GGG - chr2_4:61180347-61180366 Msa0339910:CDS 50.0%
CAATTGGAGCAGCAGCAAGA+TGG - chr2_4:61180908-61180927 Msa0339910:intron 50.0%
AGCAGCAAGATGGGAAAACC+AGG - chr2_4:61180918-61180937 Msa0339910:intron 50.0%
!! CAGAGCCTTATTCTGAGAGG+TGG - chr2_4:61181417-61181436 Msa0339910:intron 50.0%
TCTAACAAGCACGCCAGTCT+TGG + chr2_4:61181484-61181503 None:intergenic 50.0%
TCCATCACCTGCAGAATCAC+CGG + chr2_4:61181632-61181651 None:intergenic 50.0%
TTACGAGTGGAACAGGCCAA+TGG - chr2_4:61181695-61181714 Msa0339910:intron 50.0%
AAGAACGAGGTACACGAGGT+TGG - chr2_4:61181734-61181753 Msa0339910:intron 50.0%
! GTTGGTTCCTCGACATCTAC+AGG - chr2_4:61181752-61181771 Msa0339910:intron 50.0%
TTCCTCGACATCTACAGGAG+AGG - chr2_4:61181757-61181776 Msa0339910:intron 50.0%
TGAAGAGCTAAGGAGGCCAT+GGG + chr2_4:61181916-61181935 None:intergenic 50.0%
TTGAAGAGCTAAGGAGGCCA+TGG + chr2_4:61181917-61181936 None:intergenic 50.0%
ATCCCCTTGTTGGGTCTTCT+TGG - chr2_4:61181989-61182008 Msa0339910:intron 50.0%
TCCCCTTGTTGGGTCTTCTT+GGG - chr2_4:61181990-61182009 Msa0339910:intron 50.0%
ACCCAAGAAGACCCAACAAG+GGG + chr2_4:61181994-61182013 None:intergenic 50.0%
GACCCAAGAAGACCCAACAA+GGG + chr2_4:61181995-61182014 None:intergenic 50.0%
TGACCCAAGAAGACCCAACA+AGG + chr2_4:61181996-61182015 None:intergenic 50.0%
TCCCGTTCAATTGCTTGGCA+GGG - chr2_4:61182130-61182149 Msa0339910:intron 50.0%
CTTTCAATGTTGCGCAGCAC+TGG + chr2_4:61182382-61182401 None:intergenic 50.0%
GTGCTGCGCAACATTGAAAG+TGG - chr2_4:61182382-61182401 Msa0339910:intron 50.0%
! GAGCAGGGTGTTTCAGTAAC+TGG - chr2_4:61182555-61182574 Msa0339910:intron 50.0%
TCCATTGTTACCCACGACGG+GGG + chr2_4:61175625-61175644 None:intergenic 55.0%
CTCCATTGTTACCCACGACG+GGG + chr2_4:61175626-61175645 None:intergenic 55.0%
CCTCCATTGTTACCCACGAC+GGG + chr2_4:61175627-61175646 None:intergenic 55.0%
GCCTCCATTGTTACCCACGA+CGG + chr2_4:61175628-61175647 None:intergenic 55.0%
GAGGCTCGTCATGCATCTCT+AGG - chr2_4:61175643-61175662 Msa0339910:three_prime_UTR 55.0%
GTCGGAACCTGGCTTAGATC+TGG + chr2_4:61175835-61175854 None:intergenic 55.0%
GCGATAATACTGACCGGGGA+TGG + chr2_4:61175857-61175876 None:intergenic 55.0%
CGCAGCGATAATACTGACCG+GGG + chr2_4:61175861-61175880 None:intergenic 55.0%
GGAATGAGCAAGTCCGAGAG+CGG - chr2_4:61175962-61175981 Msa0339910:intron 55.0%
GAGGGTAGACGTTACCTGAG+AGG + chr2_4:61175999-61176018 None:intergenic 55.0%
CTCCCCTCCAAAATGCTCCA+TGG + chr2_4:61176201-61176220 None:intergenic 55.0%
!! CATGGAGCATTTTGGAGGGG+AGG - chr2_4:61176199-61176218 Msa0339910:intron 55.0%
CCCCTCCCAAACAAACCCTT+AGG - chr2_4:61176375-61176394 Msa0339910:intron 55.0%
TGAGGGTTTAGGAGGGGAAG+GGG - chr2_4:61176410-61176429 Msa0339910:intron 55.0%
TGGAGGGTTTAGGAGGGGAA+GGG + chr2_4:61176603-61176622 None:intergenic 55.0%
ATGGAGGGTTTAGGAGGGGA+AGG + chr2_4:61176604-61176623 None:intergenic 55.0%
! GGGGTAAGACTAGTCGGGAT+AGG - chr2_4:61176884-61176903 Msa0339910:intron 55.0%
TGTTAGGGGGCAGATGGCTA+TGG + chr2_4:61177033-61177052 None:intergenic 55.0%
!! AGGGTTTGTTAGGGGGCAGA+TGG + chr2_4:61177039-61177058 None:intergenic 55.0%
ACCCTTGTGTTTAGGAGGGG+AGG - chr2_4:61177054-61177073 Msa0339910:intron 55.0%
CCCTCCCCTCCTAAACACAA+GGG + chr2_4:61177058-61177077 None:intergenic 55.0%
CCCTTGTGTTTAGGAGGGGA+GGG - chr2_4:61177055-61177074 Msa0339910:intron 55.0%
ACCCTCCCCTCCTAAACACA+AGG + chr2_4:61177059-61177078 None:intergenic 55.0%
ATGTTGCCGACCCCACTTAG+TGG - chr2_4:61177393-61177412 Msa0339910:CDS 55.0%
TGTTGCCGACCCCACTTAGT+GGG - chr2_4:61177394-61177413 Msa0339910:CDS 55.0%
! GCACCGTATTTTGCTCCTGC+AGG + chr2_4:61178315-61178334 None:intergenic 55.0%
! GGCTATCTTGTTCTAGGCGG+AGG - chr2_4:61178616-61178635 Msa0339910:intron 55.0%
TGGTCGGGTGGACCAATAGA+TGG + chr2_4:61178716-61178735 None:intergenic 55.0%
! TGAGTCACTGATGAGGCACC+AGG - chr2_4:61178877-61178896 Msa0339910:intron 55.0%
! GAGTCACTGATGAGGCACCA+GGG - chr2_4:61178878-61178897 Msa0339910:intron 55.0%
! AGTCACTGATGAGGCACCAG+GGG - chr2_4:61178879-61178898 Msa0339910:intron 55.0%
TCCATGTCAAGAGAGGCTGC+AGG - chr2_4:61178980-61178999 Msa0339910:intron 55.0%
ACCTGCAGCCTCTCTTGACA+TGG + chr2_4:61178984-61179003 None:intergenic 55.0%
TACTAGCTAGGAGTGGTCCC+CGG - chr2_4:61179253-61179272 Msa0339910:intron 55.0%
TACTGGTCGTCTGGTTGAGG+GGG - chr2_4:61180348-61180367 Msa0339910:CDS 55.0%
! ATGGTGTTGGGGGTAACGAC+AGG + chr2_4:61180586-61180605 None:intergenic 55.0%
GGCGTTAGCTGTAGAGAGGT+TGG - chr2_4:61180695-61180714 Msa0339910:intron 55.0%
! GTGTTGACCGGTGATTCTGC+AGG - chr2_4:61181622-61181641 Msa0339910:intron 55.0%
ACCGGTGATTCTGCAGGTGA+TGG - chr2_4:61181628-61181647 Msa0339910:intron 55.0%
CACCTCTCCTGTAGATGTCG+AGG + chr2_4:61181762-61181781 None:intergenic 55.0%
CTCGACATCTACAGGAGAGG+TGG - chr2_4:61181760-61181779 Msa0339910:intron 55.0%
AGGAGAGGTGGCATCTCTGA+AGG - chr2_4:61181772-61181791 Msa0339910:intron 55.0%
TGAGGGAGGAGTTGAACCCA+TGG - chr2_4:61181897-61181916 Msa0339910:intron 55.0%
CTCCCGTTCAATTGCTTGGC+AGG - chr2_4:61182129-61182148 Msa0339910:intron 55.0%
GCCCTGCCAAGCAATTGAAC+GGG + chr2_4:61182134-61182153 None:intergenic 55.0%
GGCCCTGCCAAGCAATTGAA+CGG + chr2_4:61182135-61182154 None:intergenic 55.0%
TTGGCAGGGCCAACTTGTGA+AGG - chr2_4:61182144-61182163 Msa0339910:intron 55.0%
GAAGGAACTGAGCAGAGCAG+AGG - chr2_4:61182162-61182181 Msa0339910:intron 55.0%
AAAACCCAAAGGGGCGGCGA+AGG - chr2_4:61175575-61175594 Msa0339910:three_prime_UTR 60.0%
AAACCCAAAGGGGCGGCGAA+GGG - chr2_4:61175576-61175595 Msa0339910:three_prime_UTR 60.0%
ATTCCCTTCGCCGCCCCTTT+GGG + chr2_4:61175582-61175601 None:intergenic 60.0%
AATTCCCTTCGCCGCCCCTT+TGG + chr2_4:61175583-61175602 None:intergenic 60.0%
ATTGTTACCCACGACGGGGG+CGG + chr2_4:61175622-61175641 None:intergenic 60.0%
CCCGTCGTGGGTAACAATGG+AGG - chr2_4:61175624-61175643 Msa0339910:three_prime_UTR 60.0%
GAGGGTTTAGGAGGGGAAGG+GGG - chr2_4:61176411-61176430 Msa0339910:intron 60.0%
GTTTAGGAGGGGAAGGGGGA+GGG - chr2_4:61176415-61176434 Msa0339910:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr2_4:61176598-61176617 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr2_4:61176599-61176618 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr2_4:61176412-61176431 None:intergenic 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr2_4:61176598-61176617 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr2_4:61176599-61176618 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr2_4:61176412-61176431 None:intergenic 60.0%
GTTGCCGACCCCACTTAGTG+GGG - chr2_4:61177395-61177414 Msa0339910:CDS 60.0%
GGGTACGAAGCTGCGCTGAA+AGG + chr2_4:61178486-61178505 None:intergenic 60.0%
TAGGAGTGGTCCCCGGTAAC+TGG - chr2_4:61179260-61179279 Msa0339910:intron 60.0%
AACATCACCGCCCCCGTCGT+GGG - chr2_4:61175612-61175631 Msa0339910:three_prime_UTR 65.0%
GCCCCCGTCGTGGGTAACAA+TGG - chr2_4:61175621-61175640 Msa0339910:three_prime_UTR 65.0%
AGCCAGGTTCCGACCATCCC+CGG - chr2_4:61175841-61175860 Msa0339910:three_prime_UTR 65.0%
GGTTTAGGAGGGGAAGGGGG+AGG - chr2_4:61176414-61176433 Msa0339910:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG + chr2_4:61176594-61176613 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG + chr2_4:61176595-61176614 None:intergenic 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG + chr2_4:61176594-61176613 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG + chr2_4:61176595-61176614 None:intergenic 65.0%
GAACATCACCGCCCCCGTCG+TGG - chr2_4:61175611-61175630 Msa0339910:three_prime_UTR 70.0%
GACCGGGGATGGTCGGAACC+TGG + chr2_4:61175846-61175865 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 61175477 61182843 61175477 ID=Msa0339910;Name=Msa0339910
chr2_4 mRNA 61175477 61182843 61175477 ID=Msa0339910-mRNA-1;Parent=Msa0339910;Name=Msa0339910-mRNA-1;_AED=0.15;_eAED=0.15;_QI=163|0.92|0.92|1|0.92|1|14|396|416
chr2_4 exon 61175477 61175948 61175477 ID=Msa0339910-mRNA-1:exon:19147;Parent=Msa0339910-mRNA-1
chr2_4 exon 61176060 61176169 61176060 ID=Msa0339910-mRNA-1:exon:19146;Parent=Msa0339910-mRNA-1
chr2_4 exon 61176527 61176676 61176527 ID=Msa0339910-mRNA-1:exon:19145;Parent=Msa0339910-mRNA-1
chr2_4 exon 61177381 61177485 61177381 ID=Msa0339910-mRNA-1:exon:19144;Parent=Msa0339910-mRNA-1
chr2_4 exon 61177574 61177663 61177574 ID=Msa0339910-mRNA-1:exon:19143;Parent=Msa0339910-mRNA-1
chr2_4 exon 61178800 61178837 61178800 ID=Msa0339910-mRNA-1:exon:19142;Parent=Msa0339910-mRNA-1
chr2_4 exon 61179319 61179445 61179319 ID=Msa0339910-mRNA-1:exon:19141;Parent=Msa0339910-mRNA-1
chr2_4 exon 61179533 61179688 61179533 ID=Msa0339910-mRNA-1:exon:19140;Parent=Msa0339910-mRNA-1
chr2_4 exon 61179774 61179842 61179774 ID=Msa0339910-mRNA-1:exon:19139;Parent=Msa0339910-mRNA-1
chr2_4 exon 61179924 61180001 61179924 ID=Msa0339910-mRNA-1:exon:19138;Parent=Msa0339910-mRNA-1
chr2_4 exon 61180176 61180229 61180176 ID=Msa0339910-mRNA-1:exon:19137;Parent=Msa0339910-mRNA-1
chr2_4 exon 61180321 61180410 61180321 ID=Msa0339910-mRNA-1:exon:19136;Parent=Msa0339910-mRNA-1
chr2_4 exon 61182474 61182545 61182474 ID=Msa0339910-mRNA-1:exon:19135;Parent=Msa0339910-mRNA-1
chr2_4 exon 61182645 61182843 61182645 ID=Msa0339910-mRNA-1:exon:19134;Parent=Msa0339910-mRNA-1
chr2_4 five_prime_UTR 61182681 61182843 61182681 ID=Msa0339910-mRNA-1:five_prime_utr;Parent=Msa0339910-mRNA-1
chr2_4 CDS 61182645 61182680 61182645 ID=Msa0339910-mRNA-1:cds;Parent=Msa0339910-mRNA-1
chr2_4 CDS 61182474 61182545 61182474 ID=Msa0339910-mRNA-1:cds;Parent=Msa0339910-mRNA-1
chr2_4 CDS 61180321 61180410 61180321 ID=Msa0339910-mRNA-1:cds;Parent=Msa0339910-mRNA-1
chr2_4 CDS 61180176 61180229 61180176 ID=Msa0339910-mRNA-1:cds;Parent=Msa0339910-mRNA-1
chr2_4 CDS 61179924 61180001 61179924 ID=Msa0339910-mRNA-1:cds;Parent=Msa0339910-mRNA-1
chr2_4 CDS 61179774 61179842 61179774 ID=Msa0339910-mRNA-1:cds;Parent=Msa0339910-mRNA-1
chr2_4 CDS 61179533 61179688 61179533 ID=Msa0339910-mRNA-1:cds;Parent=Msa0339910-mRNA-1
chr2_4 CDS 61179319 61179445 61179319 ID=Msa0339910-mRNA-1:cds;Parent=Msa0339910-mRNA-1
chr2_4 CDS 61178800 61178837 61178800 ID=Msa0339910-mRNA-1:cds;Parent=Msa0339910-mRNA-1
chr2_4 CDS 61177574 61177663 61177574 ID=Msa0339910-mRNA-1:cds;Parent=Msa0339910-mRNA-1
chr2_4 CDS 61177381 61177485 61177381 ID=Msa0339910-mRNA-1:cds;Parent=Msa0339910-mRNA-1
chr2_4 CDS 61176527 61176676 61176527 ID=Msa0339910-mRNA-1:cds;Parent=Msa0339910-mRNA-1
chr2_4 CDS 61176060 61176169 61176060 ID=Msa0339910-mRNA-1:cds;Parent=Msa0339910-mRNA-1
chr2_4 CDS 61175873 61175948 61175873 ID=Msa0339910-mRNA-1:cds;Parent=Msa0339910-mRNA-1
chr2_4 three_prime_UTR 61175477 61175872 61175477 ID=Msa0339910-mRNA-1:three_prime_utr;Parent=Msa0339910-mRNA-1
Gene Sequence

>Msa0339910

ATGGAGGCTCGTCATGCATCTCTAGGTCGACGAACGCTTGAGGAAATTCGTCAAAAGAGAGCACAGGATAGATTGGTCAAAGCCTCTTCTGGACCAGATCTAAGCCAGGCAGATGTTAGTTCCCTATTATCTCAAATAAAAGTTCTGCAATGGAAGAACAATGAGTTGGATGAAGAAAACAGGAAAATAACTTCGAAGCTTCAAACGATGGAAATTGATAATGGTGCAATGCACAAGCAGTTGAATGAACTGGAGCAAAATACGGTGCCATCTCTTAGGAAAGCTCTCAGGGATGTTGCAATGGAGAAAGATGCTGCAGTTGTTGCACGAGAGGACCTTTCAGCGCAGCTTCGTACCCTGAAGAAACGTCTTAAGGATGCTGAAGAGGAGCAATATCGTGCGGAGGAAGATGCAGCAGCATTGCGAGCAGAATTGAACTCAATTCAGCAACAATCAATGACTAACACAGTTAGTACAATACCATCTATTGGTCCACCCGACCACCATCTTCAAATATTAGAAAATGAGCTAGCTGGTTTAAAATTGGAACTACAGCGTGAGTCACTGATGAGGCACCAGGGGCAAGAACAGTTAGCTAAAGAGCAAAGCCGCATTGCATCACTGATGTCTGAAAAGCAAGAGTTGGAAGAAAAATTAAACTCCATGTCAAGAGAGGCTGCAGAAGTCTCAGGTAAAGCAACTCAGAAGACATTCACTATGGAAGACAAGCAGAAACTTGATAAGCAGTTGCATGATATGGCGTTAGCTGTAGAGAGGTTGGAAAACAGTAGACAGAAACTTCTAATGGAGATTGATTCGCAATCTACAGAAATAGAGAAACTTTTTGATGAAAATTCTACTCTCTCAAATTCATATCAAGAGGCAATTGGAGCAGCAGCAAGATGGGAAAACCAGGTGATGGAGTGTCTTAAGCAAAATGAAGAGCTGCGTGGGATTCTAGAAAAATTACGAGTGGAACAGGCCAATGGCTTACCAGAATCCATTAAGAACGAGGTACACGAGGTTGGTTCCTCGACATCTACAGGAGAGGTGGCATCTCTGAAGGGCCAACTTGTGAAGGAACTGAGCAGAGCAGAGGCACTGTCAGCAGAAGTCATGCAGCTCTCTGCACAACTTGAACAAGTCAAACAAGCATATGATGGTCTTGCACGCTTTTATAGGCCAGTGCTGCGCAACATTGAAAGTGGTCTCATAAAAATGAAGCAAGACAGTTCATTGGTTGTACGATAA

Protein sequence

>Msa0339910

MEARHASLGRRTLEEIRQKRAQDRLVKASSGPDLSQADVSSLLSQIKVLQWKNNELDEENRKITSKLQTMEIDNGAMHKQLNELEQNTVPSLRKALRDVAMEKDAAVVAREDLSAQLRTLKKRLKDAEEEQYRAEEDAAALRAELNSIQQQSMTNTVSTIPSIGPPDHHLQILENELAGLKLELQRESLMRHQGQEQLAKEQSRIASLMSEKQELEEKLNSMSREAAEVSGKATQKTFTMEDKQKLDKQLHDMALAVERLENSRQKLLMEIDSQSTEIEKLFDENSTLSNSYQEAIGAAARWENQVMECLKQNEELRGILEKLRVEQANGLPESIKNEVHEVGSSTSTGEVASLKGQLVKELSRAEALSAEVMQLSAQLEQVKQAYDGLARFYRPVLRNIESGLIKMKQDSSLVVR*