AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0185510


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0185510 MtrunA17_Chr4g0028231 99.559 227 1 0 1 227 1 227 1.14e-162 448
Msa0185510 MtrunA17_Chr1g0183621 31.892 185 126 0 1 185 1 185 1.18e-25 99.8
Msa0185510 MtrunA17_Chr2g0303251 29.730 222 148 1 5 226 1 214 4.89e-21 87.4
Msa0185510 MtrunA17_Chr7g0261511 32.018 228 133 4 5 227 1 211 1.35e-18 80.9
Msa0185510 MtrunA17_Chr2g0300321 28.634 227 146 5 7 226 4 221 5.15e-15 71.2
Msa0185510 MtrunA17_Chr8g0343561 27.684 177 126 2 7 182 4 179 1.40e-14 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0185510 AT5G22950.1 82.969 229 37 1 1 227 1 229 4.32e-126 356
Msa0185510 AT3G45000.1 72.362 199 53 1 31 227 2 200 1.04e-87 258
Msa0185510 AT3G45000.2 76.259 139 31 1 91 227 1 139 6.56e-59 182
Msa0185510 AT1G03950.1 31.532 222 140 3 5 226 1 210 1.05e-28 107
Msa0185510 AT5G44560.1 29.834 181 127 0 5 185 1 181 9.37e-21 87.0
Msa0185510 AT5G44560.4 29.213 178 126 0 5 182 1 178 6.22e-20 84.3
Msa0185510 AT2G06530.1 29.362 235 142 7 4 226 1 223 6.92e-17 77.0
Msa0185510 AT5G44560.2 28.662 157 112 0 29 185 5 161 1.19e-14 70.5
Msa0185510 AT2G06530.2 28.638 213 129 6 25 226 2 202 9.17e-13 65.5
Msa0185510 AT5G44560.3 30.534 131 91 0 5 135 1 131 1.04e-12 64.3

Find 60 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAATAACTGTTGCGGATT+TGG 0.162141 1_4:-75781981 None:intergenic
ATTATATATACAAAATAAAA+TGG 0.182644 1_4:-75781908 None:intergenic
AAGAAGAAATGGAAGAAATT+AGG 0.185877 1_4:+75786157 Msa0185510:CDS
ACTCTCTTATAATATATATC+AGG 0.254147 1_4:-75786327 None:intergenic
TGCATAGCAACAGCCATTTC+AGG 0.256684 1_4:-75785709 None:intergenic
GAATGAAAATTAATTATTCT+TGG 0.264027 1_4:-75781868 None:intergenic
AACTGTTGCGGATTTGGTTT+CGG 0.312520 1_4:-75781975 None:intergenic
CCCATTTGTAATATTAGTAT+TGG 0.323850 1_4:+75786367 Msa0185510:three_prime_UTR
CGCAACAGTTATTGAGAGAT+TGG 0.341374 1_4:+75781988 Msa0185510:CDS
TCCAATACTAATATTACAAA+TGG 0.345851 1_4:-75786368 None:intergenic
TTATATATACAAAATAAAAT+GGG 0.355594 1_4:-75781907 None:intergenic
GAACCGTCTGCATGAAAATA+AGG 0.358366 1_4:+75783374 Msa0185510:CDS
TGACCTGACTTTAGCGAGTC+TGG 0.371271 1_4:-75786181 None:intergenic
AGAAGAAATGGAAGAAATTA+GGG 0.376649 1_4:+75786158 Msa0185510:CDS
CTACAGAACTTGTGAGATCT+AGG 0.401420 1_4:+75783343 Msa0185510:CDS
TCATAAACGAGTTTCTAAAA+AGG 0.417167 1_4:+75786201 Msa0185510:exon
TGTAATATTAGTATTGGAAA+AGG 0.419711 1_4:+75786373 Msa0185510:three_prime_UTR
CCTCATGAAGGCTCCTGAAA+TGG 0.421101 1_4:+75785696 Msa0185510:CDS
TCCTCTGCGGCACTTTGAGC+AGG 0.453503 1_4:-75786017 None:intergenic
TTCAGCAATTGCTCGTACTG+TGG 0.454062 1_4:+75785630 Msa0185510:intron
CATATTAGCTATGATGCCAT+TGG 0.473050 1_4:-75786406 None:intergenic
GGAATATAAATTATCGAAGA+AGG 0.474281 1_4:-75781815 None:intergenic
TGATTTAGATATTCAGAGAG+AGG 0.474813 1_4:+75782153 Msa0185510:intron
TGTTGATGATGAAGAAGAAA+TGG 0.478357 1_4:+75786146 Msa0185510:CDS
TTCTTCATCATCAACACCCT+CGG 0.485224 1_4:-75786139 None:intergenic
CCAATACTAATATTACAAAT+GGG 0.494913 1_4:-75786367 None:intergenic
AGGTGGGTGTGTTGTTCGTA+AGG 0.498532 1_4:+75781747 Msa0185510:five_prime_UTR
GTTTCAGGCAGGAGTAATTG+AGG 0.506660 1_4:+75785845 Msa0185510:intron
GGGCCAGACTCGCTAAAGTC+AGG 0.512607 1_4:+75786178 Msa0185510:CDS
CTATTAAAGAAGCTGCTAAG+AGG 0.518339 1_4:+75782194 Msa0185510:CDS
AAAGTCTTAACTGAATTAGC+TGG 0.521196 1_4:+75785942 Msa0185510:CDS
AAAGAAGAAGATATTGAAGG+TGG 0.525044 1_4:+75781730 Msa0185510:five_prime_UTR
TCAGCAATTGCTCGTACTGT+GGG 0.530452 1_4:+75785631 Msa0185510:intron
AACATTGAACGACAAATTCG+CGG 0.539995 1_4:+75782038 Msa0185510:CDS
TGAAGCTGTGAGGAAACAAA+AGG 0.551851 1_4:+75785986 Msa0185510:CDS
CAATCTCTCAATAACTGTTG+CGG 0.557549 1_4:-75781987 None:intergenic
AAAAGGTGACTTATTACCAA+TGG 0.570569 1_4:+75786390 Msa0185510:three_prime_UTR
TGCTCAAAGTGCCGCAGAGG+AGG 0.582103 1_4:+75786019 Msa0185510:CDS
CTCTCTTATAATATATATCA+GGG 0.589567 1_4:-75786326 None:intergenic
AAGAAGAAGATATTGAAGGT+GGG 0.594381 1_4:+75781731 Msa0185510:five_prime_UTR
AACTCAATATCAATGCACCT+TGG 0.594406 1_4:+75783405 Msa0185510:CDS
ACCTGCTCAAAGTGCCGCAG+AGG 0.595296 1_4:+75786016 Msa0185510:CDS
TATATATACAAAATAAAATG+GGG 0.596746 1_4:-75781906 None:intergenic
TGACTCAGCATTAGATTCTG+AGG 0.600712 1_4:+75785887 Msa0185510:CDS
TGAAGATTAGATCTTACTGA+AGG 0.602356 1_4:-75781836 None:intergenic
CAGGAAGATGCTATAGCCGA+GGG 0.609938 1_4:+75786123 Msa0185510:intron
GCTTGTCAATAACCTCATGA+AGG 0.612171 1_4:+75785684 Msa0185510:CDS
ACCTACCAACACTTTCTCCA+AGG 0.615558 1_4:-75783422 None:intergenic
CCATTTCAGGAGCCTTCATG+AGG 0.615981 1_4:-75785696 None:intergenic
GAATGACATTGGTTCTGCAA+AGG 0.618815 1_4:+75782216 Msa0185510:CDS
GCAGGAAGATGCTATAGCCG+AGG 0.620355 1_4:+75786122 Msa0185510:intron
ATGCACCTTGGAGAAAGTGT+TGG 0.628455 1_4:+75783417 Msa0185510:CDS
ATTGACAAGCTTCATAACCT+CGG 0.641959 1_4:-75785671 None:intergenic
TATATCAGGGCACAATGCAG+AGG 0.655974 1_4:-75786313 None:intergenic
CACAACTTCCTGAAGCTGTG+AGG 0.670413 1_4:+75785976 Msa0185510:CDS
AACTGCATGTACCTCCTCTG+CGG 0.671034 1_4:-75786030 None:intergenic
GCTGCTAAGAGGAATGACAT+TGG 0.677222 1_4:+75782205 Msa0185510:CDS
CACAGCTTCAGGAAGTTGTG+CGG 0.680019 1_4:-75785973 None:intergenic
ACATCTATCAAAGAGTGCCG+AGG 0.689000 1_4:+75785654 Msa0185510:CDS
GTTCAGCAAAGAAATGACCA+AGG 0.706921 1_4:+75785735 Msa0185510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTATTT+TGG + chr1_4:75782818-75782837 Msa0185510:intron 0.0%
!!! TTTTTTTTTTTTTTTATTTT+GGG + chr1_4:75782819-75782838 Msa0185510:intron 0.0%
!! TATATATACAAAATAAAATG+GGG - chr1_4:75781909-75781928 None:intergenic 10.0%
!!! ATATTTTTTAATCTTTACAA+TGG + chr1_4:75784807-75784826 Msa0185510:intron 10.0%
!! GAATGAAAATTAATTATTCT+TGG - chr1_4:75781871-75781890 None:intergenic 15.0%
!!! TTTTATTCTTAAATTACTAC+AGG - chr1_4:75782302-75782321 None:intergenic 15.0%
!!! TTTTTAATAAAGAGTATGTT+TGG - chr1_4:75783680-75783699 None:intergenic 15.0%
!!! ATTTTATCTATAGTTTTTTG+AGG + chr1_4:75784087-75784106 Msa0185510:intron 15.0%
!! CTTATAATAATTAGCTATTA+AGG - chr1_4:75784603-75784622 None:intergenic 15.0%
!! TAAAAAGAAGAAGATATTGA+AGG + chr1_4:75781727-75781746 Msa0185510:five_prime_UTR 20.0%
!!! TAAGAATAAAATTAGCTTAG+TGG + chr1_4:75782311-75782330 Msa0185510:intron 20.0%
!! GTTTCTCTTAAAAAATTTCT+AGG - chr1_4:75782552-75782571 None:intergenic 20.0%
!! AAATTTAGTGATTAATGAGT+TGG + chr1_4:75782581-75782600 Msa0185510:intron 20.0%
!!! GTTTTATCATAAACCATATT+TGG - chr1_4:75782609-75782628 None:intergenic 20.0%
!! TATGGTTTATGATAAAACAT+AGG + chr1_4:75782611-75782630 Msa0185510:intron 20.0%
!! ATGGTTTATGATAAAACATA+GGG + chr1_4:75782612-75782631 Msa0185510:intron 20.0%
!!! AGTGTATATACAAGTTTTTA+TGG + chr1_4:75783006-75783025 Msa0185510:intron 20.0%
!! AAAATCTAATATCCTTATCA+TGG + chr1_4:75783295-75783314 Msa0185510:intron 20.0%
!!! ATGATCAAATGTTTTGTTTA+TGG + chr1_4:75783835-75783854 Msa0185510:intron 20.0%
!!! TGATCAAATGTTTTGTTTAT+GGG + chr1_4:75783836-75783855 Msa0185510:intron 20.0%
!!! ATTTTATCTATAGGTTTTTG+AGG + chr1_4:75783885-75783904 Msa0185510:intron 20.0%
!!! TATGATGTTTTACAATTATC+AGG + chr1_4:75784886-75784905 Msa0185510:intron 20.0%
!! TCTTATCTCAAGTATTTATT+TGG + chr1_4:75785409-75785428 Msa0185510:intron 20.0%
!!! TGATCAATGACTAATTTTAA+AGG - chr1_4:75785563-75785582 None:intergenic 20.0%
!! GTTAATTGCATGATAATTAT+TGG + chr1_4:75785811-75785830 Msa0185510:intron 20.0%
!! CTCTCTTATAATATATATCA+GGG - chr1_4:75786329-75786348 None:intergenic 20.0%
!! ACTCTCTTATAATATATATC+AGG - chr1_4:75786330-75786349 None:intergenic 20.0%
!! CCAATACTAATATTACAAAT+GGG - chr1_4:75786370-75786389 None:intergenic 20.0%
!! TCCAATACTAATATTACAAA+TGG - chr1_4:75786371-75786390 None:intergenic 20.0%
!!! TGTAATATTAGTATTGGAAA+AGG + chr1_4:75786373-75786392 Msa0185510:three_prime_UTR 20.0%
! GGAATATAAATTATCGAAGA+AGG - chr1_4:75781818-75781837 None:intergenic 25.0%
!! AATAAAATGGGGATTTTTGA+AGG - chr1_4:75781898-75781917 None:intergenic 25.0%
!!! GTTTTAAGAGAGATCAAAAA+TGG - chr1_4:75782070-75782089 None:intergenic 25.0%
! GAAGAATCAAGTATCAATTA+GGG - chr1_4:75782092-75782111 None:intergenic 25.0%
! AGAAGAATCAAGTATCAATT+AGG - chr1_4:75782093-75782112 None:intergenic 25.0%
! TTGATTCTTCTGATTATTTG+TGG + chr1_4:75782102-75782121 Msa0185510:intron 25.0%
! TGATTATTTGTGGTTATGAT+TGG + chr1_4:75782112-75782131 Msa0185510:intron 25.0%
!!! TTCATAACCAATGCTATTTT+TGG + chr1_4:75783182-75783201 Msa0185510:intron 25.0%
!!! GTCTTCTTTTTTAGATTTCA+AGG + chr1_4:75783233-75783252 Msa0185510:intron 25.0%
! ATTGAACAAATACCATGATA+AGG - chr1_4:75783310-75783329 None:intergenic 25.0%
! ATGGTATTTGTTCAATTTAC+AGG + chr1_4:75783314-75783333 Msa0185510:intron 25.0%
!! TAGTTTTTGCAAAATCACAA+TGG - chr1_4:75783529-75783548 None:intergenic 25.0%
!! CACAACTTTTGATAAAATCA+CGG + chr1_4:75783619-75783638 Msa0185510:intron 25.0%
! ATTCAACTTAGTTAACAAGA+GGG - chr1_4:75783783-75783802 None:intergenic 25.0%
! TATTCAACTTAGTTAACAAG+AGG - chr1_4:75783784-75783803 None:intergenic 25.0%
!! TCTTGTTAACTAAGTTGAAT+AGG + chr1_4:75783783-75783802 Msa0185510:intron 25.0%
!!! GATCAAATGTTTTGTTTATG+GGG + chr1_4:75783837-75783856 Msa0185510:intron 25.0%
!! TGTCTATGGATTTTATCTAT+AGG + chr1_4:75783876-75783895 Msa0185510:intron 25.0%
!! CATGATTGTTTCATTTTAGA+AGG + chr1_4:75784726-75784745 Msa0185510:intron 25.0%
! AATTATTCTCTTCTTGAATG+TGG - chr1_4:75784970-75784989 None:intergenic 25.0%
! AGAAGAGAATAATTCAGTAA+AGG + chr1_4:75784976-75784995 Msa0185510:intron 25.0%
! GAAGAGAATAATTCAGTAAA+GGG + chr1_4:75784977-75784996 Msa0185510:intron 25.0%
! AAGAGAATAATTCAGTAAAG+GGG + chr1_4:75784978-75784997 Msa0185510:intron 25.0%
! AGCCAAATAACTAATTTAAC+AGG + chr1_4:75785013-75785032 Msa0185510:intron 25.0%
! CTCCTGTTAAATTAGTTATT+TGG - chr1_4:75785018-75785037 None:intergenic 25.0%
! CAAATAACTAATTTAACAGG+AGG + chr1_4:75785016-75785035 Msa0185510:intron 25.0%
!! TGATTTTCATACAAAGGATT+AGG - chr1_4:75785198-75785217 None:intergenic 25.0%
!! TAACTGTGATTTTCATACAA+AGG - chr1_4:75785204-75785223 None:intergenic 25.0%
! GTATGAAAATCACAGTTAAA+TGG + chr1_4:75785206-75785225 Msa0185510:intron 25.0%
!!! TGCATTTTTAGGTTTTACTT+TGG + chr1_4:75785270-75785289 Msa0185510:intron 25.0%
!!! GCATTTTTAGGTTTTACTTT+GGG + chr1_4:75785271-75785290 Msa0185510:intron 25.0%
!!! CATTTTTAGGTTTTACTTTG+GGG + chr1_4:75785272-75785291 Msa0185510:intron 25.0%
! CATAATATAGTCATTGTACA+AGG - chr1_4:75785435-75785454 None:intergenic 25.0%
!! TTGATAATAGAACTGTTCAT+TGG + chr1_4:75785584-75785603 Msa0185510:intron 25.0%
!! TCATTGGAAATTCCTAATTT+TGG + chr1_4:75785600-75785619 Msa0185510:intron 25.0%
! AAGAAGAAATGGAAGAAATT+AGG + chr1_4:75786157-75786176 Msa0185510:CDS 25.0%
! AGAAGAAATGGAAGAAATTA+GGG + chr1_4:75786158-75786177 Msa0185510:CDS 25.0%
!! TCATAAACGAGTTTCTAAAA+AGG + chr1_4:75786201-75786220 Msa0185510:exon 25.0%
! TCATAAAAAGTTCTACTTTC+TGG + chr1_4:75786277-75786296 Msa0185510:three_prime_UTR 25.0%
! CCCATTTGTAATATTAGTAT+TGG + chr1_4:75786367-75786386 Msa0185510:three_prime_UTR 25.0%
AAAGAAGAAGATATTGAAGG+TGG + chr1_4:75781730-75781749 Msa0185510:five_prime_UTR 30.0%
AAGAAGAAGATATTGAAGGT+GGG + chr1_4:75781731-75781750 Msa0185510:five_prime_UTR 30.0%
TGAAGATTAGATCTTACTGA+AGG - chr1_4:75781839-75781858 None:intergenic 30.0%
!!! ATTTTGGGATCAGTGAAAAA+TGG + chr1_4:75781929-75781948 Msa0185510:exon 30.0%
TGATTTAGATATTCAGAGAG+AGG + chr1_4:75782153-75782172 Msa0185510:intron 30.0%
AGTAAGGAGTTTAGATTAGA+TGG + chr1_4:75782494-75782513 Msa0185510:intron 30.0%
! TAATGAGTTGGATCCAAATA+TGG + chr1_4:75782593-75782612 Msa0185510:intron 30.0%
GTACAAACCAAAAATAGCAT+TGG - chr1_4:75783192-75783211 None:intergenic 30.0%
!!! ATGCTATTTTTGGTTTGTAC+TGG + chr1_4:75783192-75783211 Msa0185510:intron 30.0%
AAAAAAGAAGACTGCCTAAA+AGG - chr1_4:75783225-75783244 None:intergenic 30.0%
AAGGTTCGATAGAATAAAGT+AGG + chr1_4:75783252-75783271 Msa0185510:intron 30.0%
TATCAAAAGTTGTGCAAGTT+TGG - chr1_4:75783613-75783632 None:intergenic 30.0%
!!! TCTATAGTTTTTTGAGGTTG+AGG + chr1_4:75784093-75784112 Msa0185510:intron 30.0%
!!! CTATAGTTTTTTGAGGTTGA+GGG + chr1_4:75784094-75784113 Msa0185510:intron 30.0%
CAACATAAATGTTTCACTCT+TGG + chr1_4:75784147-75784166 Msa0185510:intron 30.0%
TATCTTAACATGCTATAGCT+AGG + chr1_4:75784190-75784209 Msa0185510:intron 30.0%
! TTCTCTTTTTCTTATGCCTT+GGG - chr1_4:75784424-75784443 None:intergenic 30.0%
! TTTCTCTTTTTCTTATGCCT+TGG - chr1_4:75784425-75784444 None:intergenic 30.0%
! CAAGCTGAATTTTATTCATG+AGG + chr1_4:75784482-75784501 Msa0185510:intron 30.0%
!! ATTTTATTCATGAGGCATTC+TGG + chr1_4:75784490-75784509 Msa0185510:intron 30.0%
!! TTTTATTCATGAGGCATTCT+GGG + chr1_4:75784491-75784510 Msa0185510:intron 30.0%
!!! CTTTTGATTTGTAACTACAC+AGG + chr1_4:75784667-75784686 Msa0185510:intron 30.0%
!! TTTCTTTTGAGAAGATGAAG+CGG + chr1_4:75784766-75784785 Msa0185510:intron 30.0%
AACATAGAATGACATTGACA+AGG + chr1_4:75784852-75784871 Msa0185510:intron 30.0%
ACATAGAATGACATTGACAA+GGG + chr1_4:75784853-75784872 Msa0185510:intron 30.0%
TTATACAAAATGAACCTTGC+TGG - chr1_4:75785141-75785160 None:intergenic 30.0%
CAAATTAAAACAGGAAGAGA+GGG + chr1_4:75785334-75785353 Msa0185510:intron 30.0%
AAATTAAAACAGGAAGAGAG+GGG + chr1_4:75785335-75785354 Msa0185510:intron 30.0%
AATTAACTTCTATGACTACG+GGG - chr1_4:75785798-75785817 None:intergenic 30.0%
CAATTAACTTCTATGACTAC+GGG - chr1_4:75785799-75785818 None:intergenic 30.0%
GCAATTAACTTCTATGACTA+CGG - chr1_4:75785800-75785819 None:intergenic 30.0%
!! TTGGTAATGTATTCTGTTTC+AGG + chr1_4:75785830-75785849 Msa0185510:intron 30.0%
AAAGTCTTAACTGAATTAGC+TGG + chr1_4:75785942-75785961 Msa0185510:CDS 30.0%
AGTTCAATTTCCTGTTAACA+AGG + chr1_4:75786049-75786068 Msa0185510:intron 30.0%
TGGAATGCATTATTATTTGC+AGG + chr1_4:75786104-75786123 Msa0185510:intron 30.0%
!! TGTTGATGATGAAGAAGAAA+TGG + chr1_4:75786146-75786165 Msa0185510:CDS 30.0%
AAAAGGTGACTTATTACCAA+TGG + chr1_4:75786390-75786409 Msa0185510:three_prime_UTR 30.0%
!! AATGGGGATTTTTGAAGGAT+TGG - chr1_4:75781893-75781912 None:intergenic 35.0%
CAATCTCTCAATAACTGTTG+CGG - chr1_4:75781990-75782009 None:intergenic 35.0%
AACATTGAACGACAAATTCG+CGG + chr1_4:75782038-75782057 Msa0185510:CDS 35.0%
CTATTAAAGAAGCTGCTAAG+AGG + chr1_4:75782194-75782213 Msa0185510:CDS 35.0%
ACCTATAGTAGAAAAGATCG+TGG + chr1_4:75782419-75782438 Msa0185510:intron 35.0%
! TCCACGATCTTTTCTACTAT+AGG - chr1_4:75782423-75782442 None:intergenic 35.0%
! GACGTGTAGATTTTGTAGTA+AGG + chr1_4:75782478-75782497 Msa0185510:intron 35.0%
AAGGAGTTTAGATTAGATGG+AGG + chr1_4:75782497-75782516 Msa0185510:intron 35.0%
CTTATCTCATTAAGTGGGAT+AGG - chr1_4:75782656-75782675 None:intergenic 35.0%
CTATCCCACTTAATGAGATA+AGG + chr1_4:75782654-75782673 Msa0185510:intron 35.0%
! CAAGCCTTATCTCATTAAGT+GGG - chr1_4:75782661-75782680 None:intergenic 35.0%
GTTTCAAAAGGCTAGAAGTT+TGG - chr1_4:75782912-75782931 None:intergenic 35.0%
!!! TTCTAGCCTTTTGAAACAAC+AGG + chr1_4:75782915-75782934 Msa0185510:intron 35.0%
GAAAGACAGTACATTGAATG+AGG - chr1_4:75782958-75782977 None:intergenic 35.0%
! TACCCAATTGAAGGCATATT+CGG + chr1_4:75783063-75783082 Msa0185510:intron 35.0%
AACTCAATATCAATGCACCT+TGG + chr1_4:75783405-75783424 Msa0185510:CDS 35.0%
!! TTTGCCTTAATTTGTCCTCT+TGG + chr1_4:75783460-75783479 Msa0185510:intron 35.0%
AACTACACTTTGTGCATGTT+TGG + chr1_4:75783544-75783563 Msa0185510:intron 35.0%
TGCAAGTTTGGTATCATAAC+TGG - chr1_4:75783601-75783620 None:intergenic 35.0%
! ACGGTAGCTCACTATTATTT+TGG + chr1_4:75783638-75783657 Msa0185510:intron 35.0%
AGTATGTTTGGTATTGCAGT+GGG - chr1_4:75783668-75783687 None:intergenic 35.0%
!!! TCTATAGGTTTTTGAGGTTG+AGG + chr1_4:75783891-75783910 Msa0185510:intron 35.0%
!!! CTATAGGTTTTTGAGGTTGA+GGG + chr1_4:75783892-75783911 Msa0185510:intron 35.0%
AACTGACTGTGATGTTTGTA+TGG + chr1_4:75783918-75783937 Msa0185510:intron 35.0%
TTTCTAAACGTGCTATACCT+AGG + chr1_4:75783988-75784007 Msa0185510:intron 35.0%
TTCTAAACGTGCTATACCTA+GGG + chr1_4:75783989-75784008 Msa0185510:intron 35.0%
TAAAAGAGACCAAACAAGAG+AGG + chr1_4:75784045-75784064 Msa0185510:intron 35.0%
AACTGATTGTGATGTCCATA+TGG + chr1_4:75784120-75784139 Msa0185510:intron 35.0%
CATTTATGTTGCATGCCATA+TGG - chr1_4:75784138-75784157 None:intergenic 35.0%
TATAGCTAGGAACAGGAAAA+GGG + chr1_4:75784203-75784222 Msa0185510:intron 35.0%
TACCTATCTCCAACTCATAT+AGG + chr1_4:75784316-75784335 Msa0185510:intron 35.0%
ACCTATCTCCAACTCATATA+GGG + chr1_4:75784317-75784336 Msa0185510:intron 35.0%
!!! GGGGATAGTTTTATATAACC+AGG + chr1_4:75784350-75784369 Msa0185510:intron 35.0%
GGCATAAGAAAAAGAGAAAG+CGG + chr1_4:75784426-75784445 Msa0185510:intron 35.0%
GCATAAGAAAAAGAGAAAGC+GGG + chr1_4:75784427-75784446 Msa0185510:intron 35.0%
! AATAGCTTGTACGAAGCTTA+TGG + chr1_4:75784631-75784650 Msa0185510:intron 35.0%
! TGATTTGTAACTACACAGGA+TGG + chr1_4:75784671-75784690 Msa0185510:intron 35.0%
GATTTGTAACTACACAGGAT+GGG + chr1_4:75784672-75784691 Msa0185510:intron 35.0%
GCAGACTAAACAATTCCTAT+AGG - chr1_4:75784703-75784722 None:intergenic 35.0%
ATAGGAATTGTTTAGTCTGC+AGG + chr1_4:75784703-75784722 Msa0185510:intron 35.0%
CTTTACAATGGCAGCTATAA+TGG + chr1_4:75784819-75784838 Msa0185510:intron 35.0%
CATAACTGAACTTGACTAGT+AGG + chr1_4:75784923-75784942 Msa0185510:intron 35.0%
AATAATTCAGTAAAGGGGCA+GGG + chr1_4:75784983-75785002 Msa0185510:intron 35.0%
TTAACAGGAGGTAATAGTTG+TGG + chr1_4:75785028-75785047 Msa0185510:intron 35.0%
TAACAGGAGGTAATAGTTGT+GGG + chr1_4:75785029-75785048 Msa0185510:intron 35.0%
AGACAGAATAGAGAGGAAAT+TGG + chr1_4:75785077-75785096 Msa0185510:intron 35.0%
TTTAATTGACACCTCCTTTG+TGG + chr1_4:75785247-75785266 Msa0185510:intron 35.0%
AACCTAAAAATGCACCACAA+AGG - chr1_4:75785264-75785283 None:intergenic 35.0%
! GGGGATAAAATTTTACTGAG+CGG + chr1_4:75785291-75785310 Msa0185510:intron 35.0%
!!! CCTCTCTTCCTGTTTTAATT+TGG - chr1_4:75785336-75785355 None:intergenic 35.0%
CCAAATTAAAACAGGAAGAG+AGG + chr1_4:75785333-75785352 Msa0185510:intron 35.0%
ATTGACAAGCTTCATAACCT+CGG - chr1_4:75785674-75785693 None:intergenic 35.0%
TAATGTATTCTGTTTCAGGC+AGG + chr1_4:75785834-75785853 Msa0185510:intron 35.0%
CATAATTAGTGTGACTTGAG+AGG - chr1_4:75786086-75786105 None:intergenic 35.0%
CTCTCAAGTCACACTAATTA+TGG + chr1_4:75786084-75786103 Msa0185510:intron 35.0%
CATATTAGCTATGATGCCAT+TGG - chr1_4:75786409-75786428 None:intergenic 35.0%
GGATCAGTGAAAAATGGAGA+AGG + chr1_4:75781935-75781954 Msa0185510:exon 40.0%
! AACTGTTGCGGATTTGGTTT+CGG - chr1_4:75781978-75781997 None:intergenic 40.0%
CTCAATAACTGTTGCGGATT+TGG - chr1_4:75781984-75782003 None:intergenic 40.0%
CGCAACAGTTATTGAGAGAT+TGG + chr1_4:75781988-75782007 Msa0185510:CDS 40.0%
!! GAATGACATTGGTTCTGCAA+AGG + chr1_4:75782216-75782235 Msa0185510:CDS 40.0%
CGTTGGATGTGTTGTAATAC+TGG + chr1_4:75782348-75782367 Msa0185510:intron 40.0%
AGATCGTGGAAGTTATGCTT+AGG + chr1_4:75782433-75782452 Msa0185510:intron 40.0%
! CCAAGCCTTATCTCATTAAG+TGG - chr1_4:75782662-75782681 None:intergenic 40.0%
CCACTTAATGAGATAAGGCT+TGG + chr1_4:75782659-75782678 Msa0185510:intron 40.0%
! AATCACATGTGTCGATGTGT+CGG + chr1_4:75782692-75782711 Msa0185510:intron 40.0%
!! CCAACACCTGTTGTTTCAAA+AGG - chr1_4:75782924-75782943 None:intergenic 40.0%
!!! CCTTTTGAAACAACAGGTGT+TGG + chr1_4:75782921-75782940 Msa0185510:intron 40.0%
CTGTCTTTCTGCTGAATGTA+AGG + chr1_4:75782969-75782988 Msa0185510:intron 40.0%
TCTTTCTGCTGAATGTAAGG+TGG + chr1_4:75782972-75782991 Msa0185510:intron 40.0%
TGCTGAATGTAAGGTGGAAT+AGG + chr1_4:75782978-75782997 Msa0185510:intron 40.0%
GTGATCGGTCTTAACATGTA+TGG - chr1_4:75783038-75783057 None:intergenic 40.0%
GAATATGCCTTCAATTGGGT+AGG - chr1_4:75783064-75783083 None:intergenic 40.0%
CACCGAATATGCCTTCAATT+GGG - chr1_4:75783068-75783087 None:intergenic 40.0%
ACACCGAATATGCCTTCAAT+TGG - chr1_4:75783069-75783088 None:intergenic 40.0%
!! GTACTGGTGTATCACCTTTT+AGG + chr1_4:75783208-75783227 Msa0185510:intron 40.0%
CTACAGAACTTGTGAGATCT+AGG + chr1_4:75783343-75783362 Msa0185510:CDS 40.0%
GAACCGTCTGCATGAAAATA+AGG + chr1_4:75783374-75783393 Msa0185510:CDS 40.0%
!!! GTGCCTTATTTTCATGCAGA+CGG - chr1_4:75783380-75783399 None:intergenic 40.0%
!!! GAGAAAGTGTTGGTAGGTTT+TGG + chr1_4:75783427-75783446 Msa0185510:intron 40.0%
TGCACCAAGAGGACAAATTA+AGG - chr1_4:75783467-75783486 None:intergenic 40.0%
GATATCAAACATGCACCAAG+AGG - chr1_4:75783478-75783497 None:intergenic 40.0%
GTGCATGTTTGATATCACGA+TGG + chr1_4:75783482-75783501 Msa0185510:intron 40.0%
GAGTATGTTTGGTATTGCAG+TGG - chr1_4:75783669-75783688 None:intergenic 40.0%
ATGAAGCACAAGAGCTAACT+TGG - chr1_4:75783707-75783726 None:intergenic 40.0%
TTATGGGGAAAACTCAACTG+CGG + chr1_4:75783852-75783871 Msa0185510:intron 40.0%
AGAGATTGTGTGCAAAGAGT+GGG - chr1_4:75783960-75783979 None:intergenic 40.0%
TAGAGATTGTGTGCAAAGAG+TGG - chr1_4:75783961-75783980 None:intergenic 40.0%
ACTCTTTGCACACAATCTCT+AGG + chr1_4:75783960-75783979 Msa0185510:intron 40.0%
!! TTGCACACAATCTCTAGGAT+TGG + chr1_4:75783965-75783984 Msa0185510:intron 40.0%
TATACCTAGGGACAGGAAAA+GGG + chr1_4:75784001-75784020 Msa0185510:intron 40.0%
AACATGCTATAGCTAGGAAC+AGG + chr1_4:75784196-75784215 Msa0185510:intron 40.0%
CTATAGCTAGGAACAGGAAA+AGG + chr1_4:75784202-75784221 Msa0185510:intron 40.0%
GAAAAGGGTCTTAGCAAAAG+AGG + chr1_4:75784218-75784237 Msa0185510:intron 40.0%
CAAAAAGAAACCAACCGAGA+GGG + chr1_4:75784246-75784265 Msa0185510:intron 40.0%
AAAAAGAAACCAACCGAGAG+GGG + chr1_4:75784247-75784266 Msa0185510:intron 40.0%
CCTATCTCCAACTCATATAG+GGG + chr1_4:75784318-75784337 Msa0185510:intron 40.0%
TCCAACTCATATAGGGGAAA+GGG + chr1_4:75784324-75784343 Msa0185510:intron 40.0%
TCATATAGGGGAAAGGGAAT+GGG + chr1_4:75784330-75784349 Msa0185510:intron 40.0%
AGGCATTCATTCCTTAGTCA+CGG + chr1_4:75784370-75784389 Msa0185510:intron 40.0%
! AGAAAAAGAGAAAGCGGGTT+AGG + chr1_4:75784432-75784451 Msa0185510:intron 40.0%
TTGCAAGTTGCAAGCAACTT+CGG - chr1_4:75784465-75784484 None:intergenic 40.0%
! TGAGGCATTCTGGGTTTATT+TGG + chr1_4:75784500-75784519 Msa0185510:intron 40.0%
! GAGGCATTCTGGGTTTATTT+GGG + chr1_4:75784501-75784520 Msa0185510:intron 40.0%
CATTCTGGGTTTATTTGGGT+TGG + chr1_4:75784505-75784524 Msa0185510:intron 40.0%
CCAACACTAATAGATATGCC+TGG - chr1_4:75784532-75784551 None:intergenic 40.0%
CCAGGCATATCTATTAGTGT+TGG + chr1_4:75784529-75784548 Msa0185510:intron 40.0%
! TTGGCGCTTATGCATGTTTT+TGG + chr1_4:75784548-75784567 Msa0185510:intron 40.0%
! TGGCGCTTATGCATGTTTTT+GGG + chr1_4:75784549-75784568 Msa0185510:intron 40.0%
GTAGGTAAGAAGCCTTTGAT+AGG + chr1_4:75784941-75784960 Msa0185510:intron 40.0%
TGAATGTGGAAGCCTATCAA+AGG - chr1_4:75784956-75784975 None:intergenic 40.0%
GAATAATTCAGTAAAGGGGC+AGG + chr1_4:75784982-75785001 Msa0185510:intron 40.0%
CTATGCAAGACAGAATAGAG+AGG + chr1_4:75785070-75785089 Msa0185510:intron 40.0%
CTAAAAATGCACCACAAAGG+AGG - chr1_4:75785261-75785280 None:intergenic 40.0%
! CTCCTTTGTGGTGCATTTTT+AGG + chr1_4:75785259-75785278 Msa0185510:intron 40.0%
AGTGAGGGCCAAATTAAAAC+AGG + chr1_4:75785325-75785344 Msa0185510:intron 40.0%
CTGAAAAGGCAGCCAAAATT+AGG - chr1_4:75785615-75785634 None:intergenic 40.0%
AGTACGAGCAATTGCTGAAA+AGG - chr1_4:75785629-75785648 None:intergenic 40.0%
GCTTGTCAATAACCTCATGA+AGG + chr1_4:75785684-75785703 Msa0185510:CDS 40.0%
GTTCAGCAAAGAAATGACCA+AGG + chr1_4:75785735-75785754 Msa0185510:CDS 40.0%
! TGAAGTATGAAGGCATACCT+TGG - chr1_4:75785755-75785774 None:intergenic 40.0%
GCAGGAGAAATGAAGTATGA+AGG - chr1_4:75785765-75785784 None:intergenic 40.0%
TGACTCAGCATTAGATTCTG+AGG + chr1_4:75785887-75785906 Msa0185510:CDS 40.0%
!! TTTTGTTTCCTCACAGCTTC+AGG - chr1_4:75785987-75786006 None:intergenic 40.0%
TGAAGCTGTGAGGAAACAAA+AGG + chr1_4:75785986-75786005 Msa0185510:CDS 40.0%
!! GCAAAAAGAGCCTTGTTAAC+AGG - chr1_4:75786062-75786081 None:intergenic 40.0%
TTCTTCATCATCAACACCCT+CGG - chr1_4:75786142-75786161 None:intergenic 40.0%
GCTGCTAAGAGGAATGACAT+TGG + chr1_4:75782205-75782224 Msa0185510:CDS 45.0%
TTGAGATCTGTCACTGACAC+CGG + chr1_4:75782258-75782277 Msa0185510:intron 45.0%
TGGAGATGAGAAAGTTGCGT+TGG + chr1_4:75782331-75782350 Msa0185510:intron 45.0%
CGACATTAGAGAGAGAGATC+AGG + chr1_4:75782392-75782411 Msa0185510:intron 45.0%
TCGTGGAAGTTATGCTTAGG+TGG + chr1_4:75782436-75782455 Msa0185510:intron 45.0%
GAGGATAGTCAGATCACTAG+AGG + chr1_4:75782516-75782535 Msa0185510:intron 45.0%
! GCACTGACAGTTCTAATCGA+AGG - chr1_4:75782767-75782786 None:intergenic 45.0%
CAATTGGGTAGGACTGTGAT+CGG - chr1_4:75783053-75783072 None:intergenic 45.0%
TCACAGTCCTACCCAATTGA+AGG + chr1_4:75783054-75783073 Msa0185510:intron 45.0%
!! CATATTCGGTGTCAGACATG+TGG + chr1_4:75783077-75783096 Msa0185510:intron 45.0%
GCTCTGACACACACAAAAAC+AGG - chr1_4:75783162-75783181 None:intergenic 45.0%
! ATGCACCTTGGAGAAAGTGT+TGG + chr1_4:75783417-75783436 Msa0185510:CDS 45.0%
!! ACCTTGGAGAAAGTGTTGGT+AGG + chr1_4:75783421-75783440 Msa0185510:intron 45.0%
ACCTACCAACACTTTCTCCA+AGG - chr1_4:75783425-75783444 None:intergenic 45.0%
GTGCATGTTTGGTATCACAG+TGG + chr1_4:75783555-75783574 Msa0185510:intron 45.0%
!! TAACTGGTTTGCCAGACTCA+CGG - chr1_4:75783585-75783604 None:intergenic 45.0%
GAGATTGTGTGCAAAGAGTG+GGG - chr1_4:75783959-75783978 None:intergenic 45.0%
CTATACCTAGGGACAGGAAA+AGG + chr1_4:75784000-75784019 Msa0185510:intron 45.0%
GAAAAGGGTCTTAGCGAAAG+AGG + chr1_4:75784016-75784035 Msa0185510:intron 45.0%
ACTCTTGGCACACAATCTCT+AGG + chr1_4:75784162-75784181 Msa0185510:intron 45.0%
TGGCACACAATCTCTAGGTT+AGG + chr1_4:75784167-75784186 Msa0185510:intron 45.0%
GCAAAAAGAAACCAACCGAG+AGG + chr1_4:75784245-75784264 Msa0185510:intron 45.0%
! CCCCTATATGAGTTGGAGAT+AGG - chr1_4:75784321-75784340 None:intergenic 45.0%
CTCCAACTCATATAGGGGAA+AGG + chr1_4:75784323-75784342 Msa0185510:intron 45.0%
TCCCTTTCCCCTATATGAGT+TGG - chr1_4:75784328-75784347 None:intergenic 45.0%
CTCATATAGGGGAAAGGGAA+TGG + chr1_4:75784329-75784348 Msa0185510:intron 45.0%
CATATAGGGGAAAGGGAATG+GGG + chr1_4:75784331-75784350 Msa0185510:intron 45.0%
GTGACTAAGGAATGAATGCC+TGG - chr1_4:75784371-75784390 None:intergenic 45.0%
GGCATTCATTCCTTAGTCAC+GGG + chr1_4:75784371-75784390 Msa0185510:intron 45.0%
! AGCAGCTGCTTCTAAAGACT+GGG + chr1_4:75784396-75784415 Msa0185510:intron 45.0%
!! GGCGCTTATGCATGTTTTTG+GGG + chr1_4:75784550-75784569 Msa0185510:intron 45.0%
!!! GCGCTTATGCATGTTTTTGG+GGG + chr1_4:75784551-75784570 Msa0185510:intron 45.0%
! GGGGGAGCTTATGAAAGTAT+TGG + chr1_4:75784569-75784588 Msa0185510:intron 45.0%
GCTTCGTACAAGCTATTCTC+TGG - chr1_4:75784628-75784647 None:intergenic 45.0%
GTAATAGTTGTGGGTAGCAG+AGG + chr1_4:75785038-75785057 Msa0185510:intron 45.0%
! GAGAGGAAATTGGAAGTGTG+TGG + chr1_4:75785087-75785106 Msa0185510:intron 45.0%
GGGATCTCAAATAACCAGCA+AGG + chr1_4:75785124-75785143 Msa0185510:intron 45.0%
AGCGGTTTACAAGTCAAGTG+AGG + chr1_4:75785309-75785328 Msa0185510:intron 45.0%
GCGGTTTACAAGTCAAGTGA+GGG + chr1_4:75785310-75785329 Msa0185510:intron 45.0%
AAAACAGGAAGAGAGGGGAA+AGG + chr1_4:75785340-75785359 Msa0185510:intron 45.0%
AAACAGGAAGAGAGGGGAAA+GGG + chr1_4:75785341-75785360 Msa0185510:intron 45.0%
TGGCTAAGTCATGCATTGTC+TGG + chr1_4:75785378-75785397 Msa0185510:intron 45.0%
TTCAGCAATTGCTCGTACTG+TGG + chr1_4:75785630-75785649 Msa0185510:intron 45.0%
TCAGCAATTGCTCGTACTGT+GGG + chr1_4:75785631-75785650 Msa0185510:intron 45.0%
!! ACATCTATCAAAGAGTGCCG+AGG + chr1_4:75785654-75785673 Msa0185510:CDS 45.0%
TGCATAGCAACAGCCATTTC+AGG - chr1_4:75785712-75785731 None:intergenic 45.0%
GTTTCAGGCAGGAGTAATTG+AGG + chr1_4:75785845-75785864 Msa0185510:intron 45.0%
TATATCAGGGCACAATGCAG+AGG - chr1_4:75786316-75786335 None:intergenic 45.0%
!! TTATATATACAAAATAAAAT+GGG - chr1_4:75781910-75781929 None:intergenic 5.0%
!! ATTATATATACAAAATAAAA+TGG - chr1_4:75781911-75781930 None:intergenic 5.0%
!!! TTATTTTGTATATATAATTT+TGG + chr1_4:75781913-75781932 Msa0185510:five_prime_UTR 5.0%
!!! TATTTTGTATATATAATTTT+GGG + chr1_4:75781914-75781933 Msa0185510:five_prime_UTR 5.0%
! AGGTGGGTGTGTTGTTCGTA+AGG + chr1_4:75781747-75781766 Msa0185510:five_prime_UTR 50.0%
TCTGTCACTGACACCGGATA+CGG + chr1_4:75782264-75782283 Msa0185510:intron 50.0%
! GACAGTTCTAATCGAAGGCG+TGG - chr1_4:75782762-75782781 None:intergenic 50.0%
CAACACTAACACGTCAACGC+TGG - chr1_4:75783136-75783155 None:intergenic 50.0%
AACTCAACTGCGGCTGTCTA+TGG + chr1_4:75783862-75783881 Msa0185510:intron 50.0%
AACGTGCTATACCTAGGGAC+AGG + chr1_4:75783994-75784013 Msa0185510:intron 50.0%
! AAGACCCTTTTCCTGTCCCT+AGG - chr1_4:75784008-75784027 None:intergenic 50.0%
AGGGTCTTAGCGAAAGAGGT+AGG + chr1_4:75784020-75784039 Msa0185510:intron 50.0%
GGGTCTTAGCGAAAGAGGTA+GGG + chr1_4:75784021-75784040 Msa0185510:intron 50.0%
TCGCAGAAGCCTCTCTTGTT+TGG - chr1_4:75784057-75784076 None:intergenic 50.0%
! GAGCAGCTGCTTCTAAAGAC+TGG + chr1_4:75784395-75784414 Msa0185510:intron 50.0%
! TTCTAAAGACTGGGCTCCCA+AGG + chr1_4:75784405-75784424 Msa0185510:intron 50.0%
!! GGGTTTATTTGGGTTGGTCC+AGG + chr1_4:75784511-75784530 Msa0185510:intron 50.0%
TGTGTGGTCATGCAGAGACT+AGG + chr1_4:75785103-75785122 Msa0185510:intron 50.0%
GTGTGGTCATGCAGAGACTA+GGG + chr1_4:75785104-75785123 Msa0185510:intron 50.0%
CCATTTCAGGAGCCTTCATG+AGG - chr1_4:75785699-75785718 None:intergenic 50.0%
CCTCATGAAGGCTCCTGAAA+TGG + chr1_4:75785696-75785715 Msa0185510:CDS 50.0%
ACTTCTATGACTACGGGGAG+AGG - chr1_4:75785793-75785812 None:intergenic 50.0%
CACAGCTTCAGGAAGTTGTG+CGG - chr1_4:75785976-75785995 None:intergenic 50.0%
CACAACTTCCTGAAGCTGTG+AGG + chr1_4:75785976-75785995 Msa0185510:CDS 50.0%
AACTGCATGTACCTCCTCTG+CGG - chr1_4:75786033-75786052 None:intergenic 50.0%
CAGGAAGATGCTATAGCCGA+GGG + chr1_4:75786123-75786142 Msa0185510:intron 50.0%
TGACCTGACTTTAGCGAGTC+TGG - chr1_4:75786184-75786203 None:intergenic 50.0%
GTGAGTGTCAGTGCCGTATC+CGG - chr1_4:75782280-75782299 None:intergenic 55.0%
! GTTCTAATCGAAGGCGTGGC+TGG - chr1_4:75782758-75782777 None:intergenic 55.0%
GAGGCTTCTGCGACTGTCTA+TGG + chr1_4:75784064-75784083 Msa0185510:intron 55.0%
TAAGTGCACACAGCCCCTCT+CGG - chr1_4:75784263-75784282 None:intergenic 55.0%
ACAGGATGGGCACGACCTAT+AGG + chr1_4:75784685-75784704 Msa0185510:intron 55.0%
!! AAGAGAGGGGAAAGGGTGCT+TGG + chr1_4:75785348-75785367 Msa0185510:intron 55.0%
!! AGAGAGGGGAAAGGGTGCTT+GGG + chr1_4:75785349-75785368 Msa0185510:intron 55.0%
!! AAAGGGTGCTTGGGGGTAAC+TGG + chr1_4:75785358-75785377 Msa0185510:intron 55.0%
GCAGGAAGATGCTATAGCCG+AGG + chr1_4:75786122-75786141 Msa0185510:intron 55.0%
ACAGTGGCTCACCGTGAGTC+TGG + chr1_4:75783571-75783590 Msa0185510:intron 60.0%
CAGCTGCTCACCCGTGACTA+AGG - chr1_4:75784384-75784403 None:intergenic 60.0%
!! GAGAGGGGAAAGGGTGCTTG+GGG + chr1_4:75785350-75785369 Msa0185510:intron 60.0%
!! AGAGGGGAAAGGGTGCTTGG+GGG + chr1_4:75785351-75785370 Msa0185510:intron 60.0%
!! ACCTGCTCAAAGTGCCGCAG+AGG + chr1_4:75786016-75786035 Msa0185510:CDS 60.0%
TCCTCTGCGGCACTTTGAGC+AGG - chr1_4:75786020-75786039 None:intergenic 60.0%
!! TGCTCAAAGTGCCGCAGAGG+AGG + chr1_4:75786019-75786038 Msa0185510:CDS 60.0%
GGGCCAGACTCGCTAAAGTC+AGG + chr1_4:75786178-75786197 Msa0185510:CDS 60.0%
TGCACACAGCCCCTCTCGGT+TGG - chr1_4:75784259-75784278 None:intergenic 65.0%
CTACGGGGAGAGGAGAGAGC+AGG - chr1_4:75785783-75785802 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 75781710 75786492 75781710 ID=Msa0185510;Name=Msa0185510
chr1_4 mRNA 75781710 75786492 75781710 ID=Msa0185510-mRNA-1;Parent=Msa0185510;Name=Msa0185510-mRNA-1;_AED=0.01;_eAED=0.01;_QI=238|1|1|1|1|1|6|286|227
chr1_4 exon 75781710 75782059 75781710 ID=Msa0185510-mRNA-1:exon:25812;Parent=Msa0185510-mRNA-1
chr1_4 exon 75782161 75782237 75782161 ID=Msa0185510-mRNA-1:exon:25813;Parent=Msa0185510-mRNA-1
chr1_4 exon 75783336 75783438 75783336 ID=Msa0185510-mRNA-1:exon:25814;Parent=Msa0185510-mRNA-1
chr1_4 exon 75785635 75785756 75785635 ID=Msa0185510-mRNA-1:exon:25815;Parent=Msa0185510-mRNA-1
chr1_4 exon 75785852 75786040 75785852 ID=Msa0185510-mRNA-1:exon:25816;Parent=Msa0185510-mRNA-1
chr1_4 exon 75786126 75786492 75786126 ID=Msa0185510-mRNA-1:exon:25817;Parent=Msa0185510-mRNA-1
chr1_4 five_prime_UTR 75781710 75781947 75781710 ID=Msa0185510-mRNA-1:five_prime_utr;Parent=Msa0185510-mRNA-1
chr1_4 CDS 75781948 75782059 75781948 ID=Msa0185510-mRNA-1:cds;Parent=Msa0185510-mRNA-1
chr1_4 CDS 75782161 75782237 75782161 ID=Msa0185510-mRNA-1:cds;Parent=Msa0185510-mRNA-1
chr1_4 CDS 75783336 75783438 75783336 ID=Msa0185510-mRNA-1:cds;Parent=Msa0185510-mRNA-1
chr1_4 CDS 75785635 75785756 75785635 ID=Msa0185510-mRNA-1:cds;Parent=Msa0185510-mRNA-1
chr1_4 CDS 75785852 75786040 75785852 ID=Msa0185510-mRNA-1:cds;Parent=Msa0185510-mRNA-1
chr1_4 CDS 75786126 75786206 75786126 ID=Msa0185510-mRNA-1:cds;Parent=Msa0185510-mRNA-1
chr1_4 three_prime_UTR 75786207 75786492 75786207 ID=Msa0185510-mRNA-1:three_prime_utr;Parent=Msa0185510-mRNA-1
Gene Sequence

>Msa0185510

ATGGAGAAGGTGATGAACATTCTGAAACCGAAACCAAATCCGCAACAGTTATTGAGAGATTGGCAACGTAAGCTTCGACAAGAGTGTCGAAACATTGAACGACAAATTCGCGATATTCAGAGAGAGGAGAAAAATGTGCAGAAAGCTATTAAAGAAGCTGCTAAGAGGAATGACATTGGTTCTGCAAAGGCACTCGCTACAGAACTTGTGAGATCTAGGAAAACAGTGAACCGTCTGCATGAAAATAAGGCACAACTGAACTCAATATCAATGCACCTTGGAGAAAGTGTTGCAATTGCTCGTACTGTGGGACATCTATCAAAGAGTGCCGAGGTTATGAAGCTTGTCAATAACCTCATGAAGGCTCCTGAAATGGCTGTTGCTATGCAAGAGTTCAGCAAAGAAATGACCAAGGCAGGAGTAATTGAGGAGATAGTAAACGATGCTGTTGACTCAGCATTAGATTCTGAGGACATAGAAGATGAAATAGATGAAGAAGTTGATAAAGTCTTAACTGAATTAGCTGGTGAGACAGCCGCACAACTTCCTGAAGCTGTGAGGAAACAAAAGGTGAAGCAACCTGCTCAAAGTGCCGCAGAGGAGGAAGATGCTATAGCCGAGGGTGTTGATGATGAAGAAGAAATGGAAGAAATTAGGGCCAGACTCGCTAAAGTCAGGTCATAA

Protein sequence

>Msa0185510

MEKVMNILKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKEAAKRNDIGSAKALATELVRSRKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPEMAVAMQEFSKEMTKAGVIEEIVNDAVDSALDSEDIEDEIDEEVDKVLTELAGETAAQLPEAVRKQKVKQPAQSAAEEEDAIAEGVDDEEEMEEIRARLAKVRS*