AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0237380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0237380 MtrunA17_Chr2g0286721 97.938 485 10 0 1 485 1 485 0.0 961
Msa0237380 MtrunA17_Chr4g0066581 82.172 488 84 1 1 485 1 488 0.0 832
Msa0237380 MtrunA17_Chr7g0259221 56.495 485 203 4 1 485 1 477 0.0 535
Msa0237380 MtrunA17_Chr7g0259471 54.037 483 214 3 3 485 1 475 0.0 528
Msa0237380 MtrunA17_Chr7g0273281 52.766 470 210 2 27 485 29 497 4.49e-175 501
Msa0237380 MtrunA17_Chr8g0373181 43.933 478 257 3 13 480 6 482 1.34e-138 407
Msa0237380 MtrunA17_Chr1g0155221 43.552 473 254 3 20 480 14 485 7.87e-135 398
Msa0237380 MtrunA17_Chr8g0373191 37.660 470 269 2 17 482 7 456 9.48e-112 338
Msa0237380 MtrunA17_Chr7g0273261 54.185 227 101 2 258 484 15 238 1.48e-79 248
Msa0237380 MtrunA17_Chr5g0404191 45.936 283 141 2 6 281 5 282 4.49e-78 246
Msa0237380 MtrunA17_Chr7g0273271 55.801 181 80 0 48 228 26 206 6.44e-68 216
Msa0237380 MtrunA17_Chr6g0457781 30.998 471 304 7 27 485 83 544 1.94e-59 204
Msa0237380 MtrunA17_Chr7g0250881 30.917 469 306 7 26 484 43 503 1.22e-58 201
Msa0237380 MtrunA17_Chr1g0213631 34.465 383 239 6 109 480 48 429 1.02e-57 197
Msa0237380 MtrunA17_Chr4g0021771 29.857 489 315 9 12 480 19 499 5.23e-57 197
Msa0237380 MtrunA17_Chr1g0213611 31.501 473 300 9 28 480 57 525 4.92e-56 195
Msa0237380 MtrunA17_Chr2g0282031 31.354 421 268 7 77 480 81 497 1.65e-52 185
Msa0237380 MtrunA17_Chr4g0034681 29.515 454 285 9 60 482 41 490 3.26e-52 184
Msa0237380 MtrunA17_Chr4g0039651 27.236 492 318 9 24 481 13 498 4.99e-52 183
Msa0237380 MtrunA17_Chr7g0214451 33.247 388 240 7 107 480 94 476 2.22e-51 182
Msa0237380 MtrunA17_Chr3g0144361 29.375 480 308 9 30 480 11 488 4.92e-51 181
Msa0237380 MtrunA17_Chr4g0036021 27.479 484 309 10 30 480 10 484 5.19e-49 176
Msa0237380 MtrunA17_Chr4g0032021 28.395 486 306 11 30 483 79 554 3.00e-48 174
Msa0237380 MtrunA17_Chr5g0432581 29.655 435 273 11 77 480 47 479 5.90e-47 169
Msa0237380 MtrunA17_Chr4g0004821 30.631 444 284 11 50 480 37 469 1.41e-44 162
Msa0237380 MtrunA17_Chr8g0373531 29.613 439 268 13 77 480 47 479 1.09e-43 160
Msa0237380 MtrunA17_Chr6g0485661 28.571 448 294 9 50 475 59 502 2.58e-43 160
Msa0237380 MtrunA17_Chr8g0390521 28.512 477 297 10 37 480 3 468 7.46e-43 158
Msa0237380 MtrunA17_Chr6g0486021 29.284 461 292 11 38 480 39 483 4.53e-42 156
Msa0237380 MtrunA17_Chr3g0085971 28.774 424 282 9 73 480 66 485 1.60e-39 149
Msa0237380 MtrunA17_Chr3g0115741 27.007 411 271 7 89 479 85 486 1.32e-38 147
Msa0237380 MtrunA17_Chr3g0115721 27.027 407 276 7 89 479 82 483 2.34e-37 143
Msa0237380 MtrunA17_Chr3g0128081 27.386 482 307 13 36 479 9 485 7.68e-37 142
Msa0237380 MtrunA17_Chr3g0078791 27.228 404 260 9 89 479 28 410 1.19e-36 140
Msa0237380 MtrunA17_Chr4g0065311 27.071 495 299 16 29 479 2 478 4.90e-36 139
Msa0237380 MtrunA17_Chr2g0303731 31.548 336 213 7 49 368 26 360 6.47e-36 140
Msa0237380 MtrunA17_Chr3g0119401 27.111 450 295 10 55 485 99 534 9.57e-36 139
Msa0237380 MtrunA17_Chr1g0205671 26.536 407 277 7 89 479 83 483 4.33e-35 137
Msa0237380 MtrunA17_Chr4g0065324 27.536 414 262 12 89 479 88 486 4.79e-35 137
Msa0237380 MtrunA17_Chr3g0115711 24.752 404 290 6 88 479 81 482 5.35e-35 137
Msa0237380 MtrunA17_Chr5g0420841 27.206 408 277 9 89 480 82 485 6.20e-35 136
Msa0237380 MtrunA17_Chr3g0078971 26.596 470 301 11 48 480 22 484 8.94e-35 136
Msa0237380 MtrunA17_Chr1g0205681 25.666 413 285 7 87 483 82 488 9.12e-35 136
Msa0237380 MtrunA17_Chr3g0115781 25.182 413 278 8 89 480 84 486 9.47e-35 136
Msa0237380 MtrunA17_Chr5g0394341 27.518 407 273 9 89 479 83 483 2.29e-34 135
Msa0237380 MtrunA17_Chr5g0403831 26.862 443 276 13 77 480 59 492 9.75e-34 133
Msa0237380 MtrunA17_Chr3g0128171 25.799 407 282 9 89 479 36 438 2.11e-33 131
Msa0237380 MtrunA17_Chr3g0115751 26.764 411 272 7 89 479 87 488 2.65e-33 132
Msa0237380 MtrunA17_Chr1g0205691 28.982 383 256 7 110 479 104 483 4.72e-33 131
Msa0237380 MtrunA17_Chr3g0078991 27.933 358 235 9 140 480 134 485 2.33e-32 129
Msa0237380 MtrunA17_Chr8g0390141 29.340 409 262 11 89 479 86 485 4.63e-32 128
Msa0237380 MtrunA17_Chr8g0390261 27.506 429 281 11 68 479 70 485 4.99e-32 128
Msa0237380 MtrunA17_Chr5g0417611 25.527 427 292 12 74 479 65 486 1.36e-31 127
Msa0237380 MtrunA17_Chr4g0048051 28.165 387 258 9 109 479 103 485 7.27e-31 125
Msa0237380 MtrunA17_Chr1g0164871 25.153 489 324 8 28 480 2 484 1.50e-30 124
Msa0237380 MtrunA17_Chr6g0486681 27.711 415 261 11 89 479 86 485 1.61e-30 124
Msa0237380 MtrunA17_Chr6g0486671 27.711 415 261 11 89 479 86 485 1.61e-30 124
Msa0237380 MtrunA17_Chr3g0121674 30.389 283 189 6 203 479 2 282 2.05e-30 120
Msa0237380 MtrunA17_Chr8g0376611 30.996 271 175 5 98 356 11 281 2.58e-30 123
Msa0237380 MtrunA17_Chr8g0376611 36.893 103 56 2 383 480 382 480 6.29e-12 67.8
Msa0237380 MtrunA17_Chr1g0164851 24.949 489 325 8 28 480 2 484 2.70e-30 124
Msa0237380 MtrunA17_Chr4g0048411 27.020 396 263 8 109 485 103 491 3.19e-30 123
Msa0237380 MtrunA17_Chr2g0303701 29.889 271 177 6 109 368 89 357 9.96e-30 122
Msa0237380 MtrunA17_Chr8g0376631 30.960 323 196 8 49 350 26 342 3.95e-29 120
Msa0237380 MtrunA17_Chr8g0376631 35.922 103 57 2 383 480 451 549 3.76e-11 65.5
Msa0237380 MtrunA17_Chr5g0404181 43.200 125 65 2 361 480 5 128 1.61e-28 109
Msa0237380 MtrunA17_Chr7g0257631 28.029 421 262 14 82 479 116 518 4.32e-28 117
Msa0237380 MtrunA17_Chr5g0445601 27.791 421 263 14 82 479 82 484 4.54e-28 117
Msa0237380 MtrunA17_Chr5g0437021 26.044 407 280 6 89 480 84 484 1.25e-27 115
Msa0237380 MtrunA17_Chr7g0221631 66.667 69 23 0 380 448 47 115 2.07e-27 106
Msa0237380 MtrunA17_Chr2g0290181 28.058 278 183 5 107 368 88 364 1.44e-25 110
Msa0237380 MtrunA17_Chr2g0290181 37.374 99 61 1 383 480 455 553 1.76e-13 72.8
Msa0237380 MtrunA17_Chr8g0376601 28.244 262 172 5 109 356 89 348 6.53e-24 105
Msa0237380 MtrunA17_Chr3g0115731 25.389 386 245 10 107 479 107 462 7.84e-24 104
Msa0237380 MtrunA17_Chr4g0065351 26.946 334 210 10 167 479 1 321 4.99e-23 100
Msa0237380 MtrunA17_Chr3g0144261 33.163 196 117 4 77 262 32 223 3.38e-21 97.1
Msa0237380 MtrunA17_Chr3g0144261 27.650 217 141 3 276 479 500 713 2.37e-14 75.9
Msa0237380 MtrunA17_Chr2g0290161 25.000 296 184 8 107 391 21 289 2.85e-18 87.4
Msa0237380 MtrunA17_Chr7g0259451 66.000 50 17 0 399 448 1 50 2.92e-18 78.6
Msa0237380 MtrunA17_Chr5g0434231 32.075 159 88 2 98 255 14 153 9.92e-18 80.1
Msa0237380 MtrunA17_Chr5g0419321 28.682 258 155 7 246 479 479 731 3.01e-17 84.7
Msa0237380 MtrunA17_Chr5g0419321 27.638 199 134 4 63 254 50 245 5.35e-16 80.9
Msa0237380 MtrunA17_Chr5g0407441 29.437 231 142 6 267 479 478 705 1.96e-16 82.4
Msa0237380 MtrunA17_Chr5g0407441 32.500 160 96 4 104 254 61 217 1.19e-14 76.6
Msa0237380 MtrunA17_Chr8g0370151 29.384 211 131 5 283 479 138 344 1.36e-15 78.2
Msa0237380 MtrunA17_Chr3g0146061 34.783 161 97 3 97 249 54 214 2.14e-15 79.0
Msa0237380 MtrunA17_Chr3g0146061 28.440 218 140 3 275 479 509 723 4.48e-15 78.2
Msa0237380 MtrunA17_Chr8g0370141 27.094 203 132 7 66 254 17 217 2.13e-12 68.6
Msa0237380 MtrunA17_Chr8g0356471 23.198 444 266 17 68 476 104 507 7.00e-12 67.8
Msa0237380 MtrunA17_Chr4g0042131 24.359 390 252 12 107 478 45 409 1.09e-11 66.6
Msa0237380 MtrunA17_Chr5g0434251 35.922 103 57 2 383 480 38 136 1.25e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0237380 AT5G18840.1 69.835 484 139 2 1 483 1 478 0.0 680
Msa0237380 AT2G48020.2 58.963 463 186 2 25 484 1 462 0.0 566
Msa0237380 AT2G48020.1 58.963 463 186 2 25 484 1 462 0.0 566
Msa0237380 AT3G05150.1 55.269 465 199 4 25 483 8 469 0.0 520
Msa0237380 AT3G05150.3 55.269 465 199 4 25 483 8 469 0.0 520
Msa0237380 AT3G05150.2 55.269 465 199 4 25 483 8 469 0.0 520
Msa0237380 AT1G54730.2 54.884 430 193 1 54 483 37 465 3.19e-174 498
Msa0237380 AT1G54730.3 54.386 399 181 1 54 452 37 434 8.33e-160 460
Msa0237380 AT1G54730.5 51.860 430 185 2 54 483 37 444 9.32e-158 455
Msa0237380 AT2G48020.4 57.724 369 152 2 25 390 1 368 7.81e-152 438
Msa0237380 AT1G54730.4 51.128 399 173 2 54 452 37 413 1.63e-143 418
Msa0237380 AT3G20460.1 43.776 482 267 4 5 484 8 487 9.97e-142 416
Msa0237380 AT3G05165.3 42.366 465 258 3 20 484 10 464 1.12e-139 410
Msa0237380 AT3G05165.2 42.366 465 258 3 20 484 10 464 1.12e-139 410
Msa0237380 AT3G05165.1 42.366 465 258 3 20 484 10 464 1.12e-139 410
Msa0237380 AT1G08930.1 47.368 437 229 1 49 485 58 493 1.16e-139 411
Msa0237380 AT1G08930.2 47.368 437 229 1 49 485 58 493 1.16e-139 411
Msa0237380 AT3G05160.1 45.413 436 237 1 49 484 21 455 2.05e-139 409
Msa0237380 AT5G27350.1 48.276 435 224 1 49 483 31 464 2.37e-139 409
Msa0237380 AT2G48020.3 59.337 332 131 2 25 353 1 331 1.86e-138 403
Msa0237380 AT1G54730.9 53.740 361 166 1 54 414 37 396 4.33e-138 404
Msa0237380 AT1G54730.7 53.740 361 166 1 54 414 37 396 4.33e-138 404
Msa0237380 AT1G08920.1 46.575 438 233 1 48 485 31 467 1.41e-137 405
Msa0237380 AT4G04760.1 45.747 435 232 2 50 481 32 465 1.48e-136 402
Msa0237380 AT5G27360.1 46.667 435 231 1 49 483 35 468 3.53e-135 399
Msa0237380 AT1G08920.2 45.843 445 233 2 48 485 31 474 8.32e-135 398
Msa0237380 AT5G27360.3 46.882 433 229 1 49 481 83 514 2.09e-134 399
Msa0237380 AT1G75220.1 42.946 482 264 3 10 481 4 484 2.11e-134 397
Msa0237380 AT4G04750.1 43.722 446 248 2 41 484 28 472 1.03e-131 390
Msa0237380 AT4G04750.2 43.722 446 248 2 41 484 28 472 1.03e-131 390
Msa0237380 AT4G04750.3 43.722 446 248 2 41 484 72 516 2.29e-131 391
Msa0237380 AT1G08890.1 45.312 448 240 2 33 480 15 457 7.15e-130 385
Msa0237380 AT3G05155.1 43.982 457 240 4 36 480 3 455 2.66e-129 383
Msa0237380 AT3G05165.6 42.857 434 238 3 20 453 10 433 7.12e-129 384
Msa0237380 AT1G19450.1 41.909 482 269 3 10 481 5 485 2.14e-128 382
Msa0237380 AT3G05160.3 44.581 406 224 1 79 484 2 406 1.19e-127 377
Msa0237380 AT3G05160.2 44.581 406 224 1 79 484 2 406 1.19e-127 377
Msa0237380 AT1G08920.3 47.132 401 211 1 48 448 31 430 9.42e-127 376
Msa0237380 AT4G04760.3 44.988 409 221 2 80 485 3 410 2.44e-125 372
Msa0237380 AT1G08900.1 43.678 435 244 1 49 483 25 458 2.93e-124 370
Msa0237380 AT1G08900.2 43.678 435 244 1 49 483 25 458 2.93e-124 370
Msa0237380 AT3G05400.1 42.451 457 260 2 26 480 1 456 6.89e-124 369
Msa0237380 AT4G04760.2 43.508 439 233 5 50 481 32 462 1.96e-122 366
Msa0237380 AT1G54730.8 50.139 361 158 2 54 414 37 375 5.98e-122 362
Msa0237380 AT1G54730.11 55.629 302 133 1 54 355 37 337 1.09e-119 354
Msa0237380 AT3G05165.4 41.667 420 235 3 20 439 10 419 1.88e-119 358
Msa0237380 AT3G05165.5 41.667 420 235 3 20 439 10 419 1.88e-119 358
Msa0237380 AT1G08900.5 43.165 417 236 1 67 483 1 416 1.71e-118 354
Msa0237380 AT1G08900.3 42.759 435 240 2 49 483 25 450 1.61e-117 353
Msa0237380 AT3G05400.2 41.228 456 245 4 27 480 2 436 1.48e-113 342
Msa0237380 AT1G54730.10 55.477 283 125 1 54 336 37 318 7.45e-109 326
Msa0237380 AT1G54730.6 55.477 283 125 1 54 336 37 318 7.45e-109 326
Msa0237380 AT1G08900.4 42.289 402 231 1 49 450 25 425 2.12e-108 329
Msa0237380 AT5G27360.2 45.479 365 198 1 119 483 1 364 2.19e-107 324
Msa0237380 AT5G27360.5 45.479 365 198 1 119 483 1 364 2.19e-107 324
Msa0237380 AT5G27360.4 42.145 401 214 2 49 449 35 417 1.14e-102 314
Msa0237380 AT3G05155.2 43.598 328 170 3 36 352 3 326 6.00e-89 275
Msa0237380 AT5G16150.2 31.489 470 305 6 26 485 82 544 1.01e-59 205
Msa0237380 AT5G16150.1 31.489 470 305 6 26 485 82 544 1.01e-59 205
Msa0237380 AT5G16150.3 31.489 470 305 6 26 485 82 544 1.01e-59 205
Msa0237380 AT3G03090.1 29.084 502 309 12 9 481 17 500 2.10e-55 193
Msa0237380 AT5G17010.1 27.789 511 320 12 4 481 6 500 3.03e-53 187
Msa0237380 AT5G17010.3 27.789 511 320 12 4 481 6 500 3.03e-53 187
Msa0237380 AT5G17010.4 27.789 511 320 12 4 481 6 500 3.03e-53 187
Msa0237380 AT2G43330.1 33.504 391 233 10 109 480 94 476 8.96e-53 186
Msa0237380 AT2G16130.1 30.137 438 277 7 77 485 54 491 1.90e-50 180
Msa0237380 AT2G16120.1 29.194 459 288 7 60 485 37 491 3.86e-50 179
Msa0237380 AT5G59250.1 29.339 484 305 11 30 483 80 556 4.30e-50 180
Msa0237380 AT2G20780.1 29.979 477 304 10 26 480 29 497 1.87e-49 177
Msa0237380 AT2G20780.2 30.588 425 262 9 78 480 26 439 7.59e-49 174
Msa0237380 AT3G18830.1 27.500 440 283 8 77 484 64 499 4.10e-48 174
Msa0237380 AT4G36670.1 29.825 456 290 9 55 481 23 477 2.49e-46 168
Msa0237380 AT1G05030.1 29.778 450 282 9 55 485 85 519 2.17e-44 163
Msa0237380 AT1G05030.2 30.073 409 256 7 93 485 73 467 2.19e-44 162
Msa0237380 AT2G18480.1 26.949 449 293 7 63 480 36 480 1.69e-43 160
Msa0237380 AT1G67300.2 29.053 475 288 11 33 480 35 487 5.38e-43 159
Msa0237380 AT1G67300.1 29.053 475 287 12 33 480 35 486 2.50e-41 154
Msa0237380 AT1G67300.3 29.053 475 287 12 33 480 35 486 2.50e-41 154
Msa0237380 AT1G79820.2 29.979 467 285 12 36 480 41 487 6.94e-39 148
Msa0237380 AT1G79820.1 29.979 467 285 12 36 480 41 487 6.94e-39 148
Msa0237380 AT5G26340.1 28.431 408 268 9 89 479 84 484 8.08e-36 139
Msa0237380 AT3G05960.1 27.553 421 261 9 89 483 80 482 1.51e-35 139
Msa0237380 AT4G21480.1 27.981 411 272 8 87 480 81 484 2.62e-35 138
Msa0237380 AT5G26250.1 26.220 492 302 12 36 483 9 483 7.54e-35 137
Msa0237380 AT1G11260.1 27.073 410 273 9 89 479 83 485 1.64e-34 136
Msa0237380 AT1G67300.6 28.605 423 253 11 33 429 35 434 3.51e-34 134
Msa0237380 AT1G67300.7 28.605 423 253 11 33 429 35 434 3.51e-34 134
Msa0237380 AT1G79820.4 29.782 413 253 10 36 429 41 435 1.19e-33 132
Msa0237380 AT1G67300.4 28.814 413 245 11 33 419 35 424 3.79e-33 130
Msa0237380 AT1G67300.5 28.814 413 245 11 33 419 35 424 3.79e-33 130
Msa0237380 AT5G23270.1 26.585 410 274 8 89 479 85 486 1.56e-32 130
Msa0237380 AT3G19940.1 25.428 409 279 9 89 479 85 485 7.16e-32 128
Msa0237380 AT1G07340.1 27.475 404 276 8 89 479 82 481 8.69e-32 128
Msa0237380 AT1G30220.1 31.765 340 208 11 49 368 28 363 2.95e-31 127
Msa0237380 AT1G30220.1 35.922 103 57 2 383 480 455 553 1.43e-11 67.0
Msa0237380 AT5G17010.2 23.896 498 274 12 21 481 8 437 3.75e-31 125
Msa0237380 AT1G77210.2 28.186 408 268 10 89 479 86 485 5.44e-31 125
Msa0237380 AT1G77210.1 28.186 408 268 10 89 479 86 485 5.44e-31 125
Msa0237380 AT1G50310.1 25.854 410 277 10 89 479 85 486 3.09e-30 124
Msa0237380 AT3G19930.1 26.044 407 282 8 89 480 82 484 5.29e-30 123
Msa0237380 AT3G19930.2 26.044 407 282 8 89 480 82 484 5.29e-30 123
Msa0237380 AT4G02050.2 28.205 351 228 9 145 479 142 484 3.02e-29 120
Msa0237380 AT4G02050.1 28.205 351 228 9 145 479 142 484 3.02e-29 120
Msa0237380 AT5G61520.1 27.500 360 225 9 142 479 142 487 3.12e-27 115
Msa0237380 AT5G61520.2 27.500 360 225 9 142 479 94 439 3.40e-27 114
Msa0237380 AT1G34580.1 26.087 414 274 11 89 479 83 487 1.47e-25 110
Msa0237380 AT1G34580.2 26.087 414 274 11 89 479 33 437 1.51e-25 109
Msa0237380 AT2G35740.1 26.871 294 195 7 93 369 73 363 1.24e-24 107
Msa0237380 AT2G35740.1 37.374 99 61 1 383 480 458 556 1.59e-13 73.2
Msa0237380 AT1G50310.2 25.740 338 224 10 161 479 14 343 3.67e-24 104
Msa0237380 AT4G16480.2 29.562 274 169 9 109 363 90 358 5.37e-24 105
Msa0237380 AT4G16480.2 35.354 99 63 1 383 480 459 557 7.23e-13 71.2
Msa0237380 AT4G16480.3 29.562 274 169 9 109 363 90 358 5.37e-24 105
Msa0237380 AT4G16480.3 35.354 99 63 1 383 480 459 557 7.23e-13 71.2
Msa0237380 AT4G16480.1 29.562 274 169 9 109 363 90 358 5.37e-24 105
Msa0237380 AT4G16480.1 35.354 99 63 1 383 480 459 557 7.23e-13 71.2
Msa0237380 AT1G77210.3 28.655 342 209 11 160 479 8 336 2.03e-23 101
Msa0237380 AT1G79820.3 26.898 461 259 13 36 480 41 439 6.01e-23 101
Msa0237380 AT3G51490.1 35.714 168 94 4 97 254 54 217 9.34e-19 90.1
Msa0237380 AT3G51490.1 27.982 218 133 5 275 479 502 708 8.84e-13 71.2
Msa0237380 AT3G51490.2 35.714 168 94 4 97 254 54 217 9.42e-19 90.1
Msa0237380 AT3G51490.2 29.358 218 138 5 275 479 502 716 1.32e-15 80.1
Msa0237380 AT3G51490.3 35.714 168 94 4 97 254 4 167 1.10e-18 89.7
Msa0237380 AT3G51490.3 29.358 218 138 5 275 479 452 666 1.25e-15 80.1
Msa0237380 AT1G20840.2 28.636 220 149 3 51 263 6 224 1.57e-18 89.4
Msa0237380 AT1G20840.2 27.189 217 142 3 276 479 502 715 3.04e-14 75.9
Msa0237380 AT1G20840.1 28.636 220 149 3 51 263 6 224 1.57e-18 89.4
Msa0237380 AT1G20840.1 27.189 217 142 3 276 479 502 715 3.04e-14 75.9
Msa0237380 AT4G35300.9 34.536 194 103 6 77 254 32 217 2.51e-18 88.6
Msa0237380 AT4G35300.9 29.817 218 137 4 275 479 498 712 2.53e-15 79.3
Msa0237380 AT4G35300.2 34.536 194 103 6 77 254 32 217 2.51e-18 88.6
Msa0237380 AT4G35300.2 29.817 218 137 4 275 479 498 712 2.53e-15 79.3
Msa0237380 AT4G35300.3 34.536 194 103 6 77 254 32 217 2.51e-18 88.6
Msa0237380 AT4G35300.3 29.817 218 137 4 275 479 498 712 2.53e-15 79.3
Msa0237380 AT4G35300.4 34.536 194 103 6 77 254 32 217 2.92e-18 88.6
Msa0237380 AT4G35300.4 29.817 218 137 4 275 479 508 722 2.64e-15 79.3
Msa0237380 AT4G35300.8 34.536 194 103 6 77 254 32 217 2.92e-18 88.6
Msa0237380 AT4G35300.8 29.817 218 137 4 275 479 508 722 2.64e-15 79.3
Msa0237380 AT4G35300.6 34.536 194 103 6 77 254 32 217 2.92e-18 88.6
Msa0237380 AT4G35300.6 29.817 218 137 4 275 479 508 722 2.64e-15 79.3
Msa0237380 AT4G35300.11 34.536 194 103 6 77 254 32 217 2.92e-18 88.6
Msa0237380 AT4G35300.11 29.817 218 137 4 275 479 508 722 2.64e-15 79.3
Msa0237380 AT4G35300.1 34.536 194 103 6 77 254 32 217 2.92e-18 88.6
Msa0237380 AT4G35300.1 29.817 218 137 4 275 479 508 722 2.64e-15 79.3
Msa0237380 AT4G35300.10 34.536 194 103 6 77 254 32 217 2.92e-18 88.6
Msa0237380 AT4G35300.10 29.817 218 137 4 275 479 508 722 2.64e-15 79.3
Msa0237380 AT4G35300.7 34.536 194 103 6 77 254 32 217 2.92e-18 88.6
Msa0237380 AT4G35300.7 29.817 218 137 4 275 479 508 722 2.64e-15 79.3
Msa0237380 AT1G54730.1 54.839 62 28 0 100 161 1 62 8.67e-17 75.1
Msa0237380 AT4G35300.5 29.817 218 137 4 275 479 311 525 1.60e-15 79.3
Msa0237380 AT1G79820.5 25.485 361 183 13 144 485 89 382 9.83e-15 76.3

Find 110 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACAATCTGTTGGAATTAA+TGG 0.124064 2_2:+10519302 Msa0237380:CDS
TTGCAGCTTATGATTGTTAT+TGG 0.148748 2_2:+10518365 Msa0237380:intron
CATTAAATATATCAAAATAT+TGG 0.220828 2_2:-10520911 None:intergenic
CAAAACATTGGAAGAAATTC+AGG 0.233434 2_2:+10520801 Msa0237380:CDS
TGCTGGAAGTTTGGTGGTTT+TGG 0.236584 2_2:+10520536 Msa0237380:CDS
TGATAACTAATGCCGATAAT+TGG 0.240590 2_2:-10520971 None:intergenic
TGATGAAGCTAATGAAATTC+TGG 0.251682 2_2:+10518981 Msa0237380:CDS
TCAGATTGGAGTTGGATTAA+TGG 0.253920 2_2:+10519274 Msa0237380:intron
TAATAGGAAGTCTCATAAAT+TGG 0.255488 2_2:+10518405 Msa0237380:CDS
AAGAATTTCAACTAGCATTA+AGG 0.257869 2_2:+10518929 Msa0237380:CDS
CATTAGTTATCAAATTCTTT+TGG 0.260068 2_2:+10520982 Msa0237380:three_prime_UTR
GCAGTTCCTTTCACATTTAT+CGG 0.267185 2_2:-10520516 None:intergenic
ATGGCTCCCAACATGGTAAA+TGG 0.286883 2_2:-10519877 None:intergenic
TATGCTTTGTCTGTCCTAAA+TGG 0.293601 2_2:-10521007 None:intergenic
CCTTGCATTTGCTTGCTTGT+TGG 0.304574 2_2:+10518564 Msa0237380:CDS
TTTGAACCAAGATGTCATTA+AGG 0.306072 2_2:+10521050 Msa0237380:three_prime_UTR
AGCACATTTGTTGCTGTTTG+TGG 0.330585 2_2:+10515033 Msa0237380:CDS
TCCAGACTTATCCATCAAAA+TGG 0.331748 2_2:-10519896 None:intergenic
TCAGATAAAAGTGTGGAAAA+TGG 0.337919 2_2:+10514988 Msa0237380:CDS
TGGATCGGTTATATACATTA+TGG 0.339834 2_2:+10520862 Msa0237380:three_prime_UTR
GCTATTTCTGCTATATATAC+TGG 0.345158 2_2:-10518225 None:intergenic
TTGGGTTGGGATCAGTTCCT+TGG 0.348262 2_2:+10520380 Msa0237380:CDS
CAAAGCATAGATAGAATAAC+AGG 0.349701 2_2:+10521021 Msa0237380:three_prime_UTR
TCTGCTAGTGGAACATTCTT+AGG 0.349802 2_2:+10520033 Msa0237380:CDS
ATTAAATATATCAAAATATT+GGG 0.353502 2_2:-10520910 None:intergenic
GACATTGCTTCTGTCTCTCT+TGG 0.367254 2_2:+10520884 Msa0237380:three_prime_UTR
CAGGTTCCATTTACCATGTT+GGG 0.379246 2_2:+10519871 Msa0237380:intron
TTCTTAGGCTGCTTTATAAC+CGG 0.380196 2_2:+10520048 Msa0237380:CDS
GAATGAGCAATATATATATA+TGG 0.383413 2_2:+10520842 Msa0237380:three_prime_UTR
TGGATCAGAATCAAAGCTTA+TGG 0.390013 2_2:+10520171 Msa0237380:intron
CAGAGCGCACATATTTGCTT+TGG 0.390072 2_2:-10519156 None:intergenic
GCTAGCTGTCTTCTTCTCTA+AGG 0.393869 2_2:+10517609 Msa0237380:CDS
TGGGTTGGGATCAGTTCCTT+GGG 0.394114 2_2:+10520381 Msa0237380:CDS
ATTGAGGATGGAGAAACTAA+TGG 0.405911 2_2:+10514904 Msa0237380:CDS
CCTGGACACTGTCCAATTAT+CGG 0.407891 2_2:+10520959 Msa0237380:three_prime_UTR
CACCCACTCAAGCAGCCATC+AGG 0.409270 2_2:+10515751 Msa0237380:CDS
ATTAGCAGTTGCAGGTGTAT+TGG 0.415758 2_2:+10520211 Msa0237380:CDS
CTACAAATAGAATGGTTAAG+AGG 0.421225 2_2:-10520753 None:intergenic
GCAAATATTACGGTTATAAG+AGG 0.424340 2_2:-10519925 None:intergenic
TCATTCCTGAGTCTCCTAGA+TGG 0.424540 2_2:+10518595 Msa0237380:CDS
TTGAGGATGGAGAAACTAAT+GGG 0.428281 2_2:+10514905 Msa0237380:CDS
GAACAATTTCAGATTGGAGT+TGG 0.429941 2_2:+10519266 Msa0237380:intron
GTGCCAACATTAGCAGTTGC+AGG 0.430412 2_2:+10520203 Msa0237380:CDS
ATCCCTGATGGCTGCTTGAG+TGG 0.436353 2_2:-10515754 None:intergenic
GAAAGGAACTGCTGGAAGTT+TGG 0.437546 2_2:+10520527 Msa0237380:CDS
GTGACCATTGGTGCAATGCT+TGG 0.438418 2_2:+10517411 Msa0237380:CDS
CTTATGAGTTGGAGTTCTCC+TGG 0.439978 2_2:+10520603 Msa0237380:CDS
ATGGCATTTCAACAATCTGT+TGG 0.440440 2_2:+10519293 Msa0237380:CDS
CTGATATCATTGGCAGGAAA+GGG 0.440631 2_2:+10517457 Msa0237380:CDS
TCCAGGCCTTAATGACATCT+TGG 0.442306 2_2:-10521056 None:intergenic
TCCTTTCCTTGTTGAATGAA+AGG 0.450559 2_2:-10514946 None:intergenic
AGGACTTGCAACAACAAATC+AGG 0.474061 2_2:+10518266 Msa0237380:CDS
AACTAGCATTAAGGAAACTA+CGG 0.476801 2_2:+10518938 Msa0237380:CDS
TTTGGTTCTTTGGTGACCAT+TGG 0.481812 2_2:+10517399 Msa0237380:CDS
ATCAAAGCTTATGGCTTGAG+TGG 0.485093 2_2:+10520180 Msa0237380:CDS
GAGTTCTTACACACTTGACT+TGG 0.485780 2_2:+10517734 Msa0237380:intron
GCAAGCAAATGCAAGGAACT+AGG 0.487157 2_2:-10518557 None:intergenic
ACAGGTTCCATTTACCATGT+TGG 0.487576 2_2:+10519870 Msa0237380:intron
AGTGTGGAAAATGGATCCAT+TGG 0.491014 2_2:+10514997 Msa0237380:CDS
TGGTAGCGTGGCTAGGAGCT+TGG 0.495651 2_2:+10520556 Msa0237380:CDS
CATAGCTTATGCATGTATAC+AGG 0.497491 2_2:+10519764 Msa0237380:CDS
CAGGCTATGAGAATTTCAAC+AGG 0.497649 2_2:+10517568 Msa0237380:intron
TCCTGAGTCTCCTAGATGGC+TGG 0.502043 2_2:+10518599 Msa0237380:CDS
TCCCTGATGGCTGCTTGAGT+GGG 0.502182 2_2:-10515753 None:intergenic
AGCTCCAAGCATTGCACCAA+TGG 0.502584 2_2:-10517415 None:intergenic
CCGATAATTGGACAGTGTCC+AGG 0.503983 2_2:-10520959 None:intergenic
GGGCTTTCTTCCGCAAAAGC+TGG 0.506544 2_2:+10519738 Msa0237380:intron
AAGGATGCTTGTGAAGAAGT+TGG 0.512052 2_2:+10514964 Msa0237380:CDS
ATAAATGTGAAAGGAACTGC+TGG 0.512457 2_2:+10520519 Msa0237380:CDS
CAAGAACCTTTCATTCAACA+AGG 0.516918 2_2:+10514940 Msa0237380:CDS
TCCTTCCTTACCAGCCATCT+AGG 0.519483 2_2:-10518609 None:intergenic
ACTAGCATTAAGGAAACTAC+GGG 0.523883 2_2:+10518939 Msa0237380:CDS
TTAAGTAAATTACAACATCC+AGG 0.527916 2_2:-10521073 None:intergenic
GGTCGAGTTACTGATATCAT+TGG 0.527994 2_2:+10517447 Msa0237380:CDS
ACCTTTCATTCAACAAGGAA+AGG 0.530081 2_2:+10514945 Msa0237380:CDS
TCTGTTGGAATTAATGGCAT+AGG 0.532395 2_2:+10519308 Msa0237380:CDS
TGAGCAGCATACGGATATTG+AGG 0.533801 2_2:+10514888 Msa0237380:CDS
CTTACACACTTGACTTGGGA+AGG 0.536358 2_2:+10517739 Msa0237380:CDS
ACCAAGATGTCATTAAGGCC+TGG 0.537644 2_2:+10521055 Msa0237380:three_prime_UTR
TACAAATAGAATGGTTAAGA+GGG 0.541695 2_2:-10520752 None:intergenic
ACTGATATCATTGGCAGGAA+AGG 0.545701 2_2:+10517456 Msa0237380:CDS
ACCAGCCATCTAGGAGACTC+AGG 0.545779 2_2:-10518600 None:intergenic
TAATTTCAGGTCTCTGCTAG+TGG 0.548298 2_2:+10520021 Msa0237380:intron
CAGCATACGGATATTGAGGA+TGG 0.555700 2_2:+10514892 Msa0237380:CDS
CATCAAAATGGCTCCCAACA+TGG 0.557884 2_2:-10519884 None:intergenic
TGGCGACAACTAGCTCTAGC+AGG 0.561924 2_2:+10518425 Msa0237380:CDS
CTGTATACATGCATAAGCTA+TGG 0.562149 2_2:-10519763 None:intergenic
AATGACAATTGAGCAGCATA+CGG 0.570641 2_2:+10514879 None:intergenic
ACACCTGCAACTGCTAATGT+TGG 0.582284 2_2:-10520206 None:intergenic
GAGTTACTGATATCATTGGC+AGG 0.583613 2_2:+10517451 Msa0237380:CDS
TGAAACCAAAGGCAAAACAT+TGG 0.583752 2_2:+10520789 Msa0237380:CDS
AGTTCTTACACACTTGACTT+GGG 0.588739 2_2:+10517735 Msa0237380:CDS
AGGAACTGCTGGAAGTTTGG+TGG 0.588904 2_2:+10520530 Msa0237380:CDS
ACCCACTCAAGCAGCCATCA+GGG 0.595837 2_2:+10515752 Msa0237380:CDS
AATTGGAGTTATCTCATATG+TGG 0.595991 2_2:+10517779 Msa0237380:CDS
ATCAAGCTATAAAGCAGACC+TGG 0.605933 2_2:+10520941 Msa0237380:three_prime_UTR
TCAAAGCTTATGGCTTGAGT+GGG 0.616539 2_2:+10520181 Msa0237380:CDS
CCAACAAGCAAGCAAATGCA+AGG 0.620888 2_2:-10518564 None:intergenic
TAGATTAAGATCATCCCTGA+TGG 0.628619 2_2:-10515766 None:intergenic
GTGTTTCCGATAAATGTGAA+AGG 0.633214 2_2:+10520510 Msa0237380:CDS
ACCTCAGACATCATCACCCA+AGG 0.633561 2_2:-10520397 None:intergenic
AGTTGGATCAGATAAAAGTG+TGG 0.634652 2_2:+10514981 Msa0237380:CDS
AAAGTAGTCCCTGAAACCAA+AGG 0.635083 2_2:+10520778 Msa0237380:CDS
ATGCTTGGAGCTATAACAAG+TGG 0.646646 2_2:+10517426 Msa0237380:CDS
GCTAAGCAGAACCATTCCAA+TGG 0.646752 2_2:-10515013 None:intergenic
TGATATCATTGGCAGGAAAG+GGG 0.647485 2_2:+10517458 Msa0237380:CDS
GGAAAATGGATCCATTGGAA+TGG 0.671020 2_2:+10515002 Msa0237380:CDS
TCTTAATCTATCTCTTGCTG+AGG 0.689216 2_2:+10515779 Msa0237380:CDS
TCCTTGGGTGATGATGTCTG+AGG 0.717844 2_2:+10520396 Msa0237380:CDS
CTAGCATTAAGGAAACTACG+GGG 0.788030 2_2:+10518940 Msa0237380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATTTATTTTATAAAAA+AGG - chr2_2:10515872-10515891 None:intergenic 0.0%
!!! AGATTTTTGAAAATTATTAT+TGG + chr2_2:10515089-10515108 Msa0237380:intron 10.0%
!! CTACTTAATTAAATTTAAAT+TGG + chr2_2:10515435-10515454 Msa0237380:intron 10.0%
!! CATATAAAAAATTAACTTAT+TGG - chr2_2:10515540-10515559 None:intergenic 10.0%
!!! ATCTGATTTTTTTTTTTTTT+TGG + chr2_2:10516195-10516214 Msa0237380:intron 10.0%
!! TCTAAGAATAAAATATTAAA+TGG - chr2_2:10517519-10517538 None:intergenic 10.0%
!!! AAAATTAATTTTAACATGTT+TGG + chr2_2:10517887-10517906 Msa0237380:intron 10.0%
!! TTAGAAATATTATAATAAAG+AGG - chr2_2:10518179-10518198 None:intergenic 10.0%
!!! ATTTAAAACTAATGTTATTA+TGG - chr2_2:10518456-10518475 None:intergenic 10.0%
!! TCAATTAAAAAAAAATACTA+TGG - chr2_2:10519038-10519057 None:intergenic 10.0%
!! AAATGTAATAAATACTATAA+TGG - chr2_2:10519575-10519594 None:intergenic 10.0%
!! CATTAAATATATCAAAATAT+TGG - chr2_2:10520914-10520933 None:intergenic 10.0%
!!! AAAAAATTAACTTATTGGTT+TGG - chr2_2:10515577-10515596 None:intergenic 15.0%
!! ATGATATAATAATGACAATA+AGG - chr2_2:10515831-10515850 None:intergenic 15.0%
!!! TTTTTTTTTTTTGGTTACTT+TGG + chr2_2:10516204-10516223 Msa0237380:intron 15.0%
!!! ACTATACTATTATTTTTAGA+TGG - chr2_2:10516324-10516343 None:intergenic 15.0%
!!! TCAAATTTTTTAAGTTTTGT+AGG - chr2_2:10516806-10516825 None:intergenic 15.0%
!!! TCAAATTTTTTAAGTATTGT+AGG - chr2_2:10517017-10517036 None:intergenic 15.0%
!! CTTAAAAAATTTGAAGAAAA+TGG + chr2_2:10517023-10517042 Msa0237380:intron 15.0%
!!! TATTTCTACATAATATGTTT+TGG + chr2_2:10517357-10517376 Msa0237380:intron 15.0%
!!! ATTTCTACATAATATGTTTT+GGG + chr2_2:10517358-10517377 Msa0237380:intron 15.0%
!!! TATTTTTATTCAATCATGTT+TGG + chr2_2:10517837-10517856 Msa0237380:intron 15.0%
!!! AATTTGAAATTTTTAGTTCT+AGG + chr2_2:10517947-10517966 Msa0237380:intron 15.0%
!!! AAAATTGATTTTGAATGAAT+TGG - chr2_2:10518079-10518098 None:intergenic 15.0%
!!! CATTATTCTTATTCTTTTAT+AGG - chr2_2:10518849-10518868 None:intergenic 15.0%
!!! TTAATCAATGACAAAATTTT+TGG + chr2_2:10519481-10519500 Msa0237380:intron 15.0%
!!! TAATCAATGACAAAATTTTT+GGG + chr2_2:10519482-10519501 Msa0237380:intron 15.0%
!! GACAAAATAATTTAGTTATA+AGG - chr2_2:10519825-10519844 None:intergenic 15.0%
!! TATTTATTACATTGAATAAC+AGG + chr2_2:10519852-10519871 Msa0237380:intron 15.0%
!! GAAATTATACAACAATTATT+TGG - chr2_2:10520008-10520027 None:intergenic 15.0%
!! AATAATTGTTGTATAATTTC+AGG + chr2_2:10520008-10520027 Msa0237380:intron 15.0%
!!! TAATAATTGTATTGTTTTTG+TGG + chr2_2:10520698-10520717 Msa0237380:intron 15.0%
!! TGAAAATTATTATTGGCAAT+TGG + chr2_2:10515096-10515115 Msa0237380:intron 20.0%
!! GGATTAAAATCAAATATAAG+AGG - chr2_2:10515153-10515172 None:intergenic 20.0%
!! GATAATTAAAGTATAGTCAA+TGG + chr2_2:10515220-10515239 Msa0237380:intron 20.0%
!! ACAACATAATTAAACTTGAA+TGG + chr2_2:10515376-10515395 Msa0237380:intron 20.0%
!! TTATTTATAATGTCTTCGTA+AGG + chr2_2:10515504-10515523 Msa0237380:intron 20.0%
!!! TTTTTATATGCTTGTGAAAA+AGG + chr2_2:10515592-10515611 Msa0237380:intron 20.0%
!!! AGTATAGTAAGCTTTTAAAT+AGG + chr2_2:10516336-10516355 Msa0237380:intron 20.0%
!!! AATAGGTCAAACTTTAAAAT+TGG + chr2_2:10516353-10516372 Msa0237380:intron 20.0%
!!! TTTGTTCGGATTTTATAATT+CGG - chr2_2:10516649-10516668 None:intergenic 20.0%
!! CTTAAAAAATTTGAAGAGAA+TGG + chr2_2:10516812-10516831 Msa0237380:intron 20.0%
!! AAAAATTTGAAGAAAATGGA+AGG + chr2_2:10517027-10517046 Msa0237380:intron 20.0%
!!! TTTCTACATAATATGTTTTG+GGG + chr2_2:10517359-10517378 Msa0237380:intron 20.0%
!! ATTAAATGGAGAGAATATTA+AGG - chr2_2:10517505-10517524 None:intergenic 20.0%
!! TTTCTTAAGTATCATTGAAT+TGG + chr2_2:10518318-10518337 Msa0237380:intron 20.0%
!!! TCATCAATGTCATTTTTAAT+AGG + chr2_2:10518389-10518408 Msa0237380:CDS 20.0%
!!! AGTTTTAAATTTTTGCTTGA+AGG + chr2_2:10518466-10518485 Msa0237380:intron 20.0%
!! AAGGATATAACAAATTAAGA+AGG + chr2_2:10518485-10518504 Msa0237380:intron 20.0%
!!! AAATTATGCACAATTTTTTC+AGG + chr2_2:10518888-10518907 Msa0237380:intron 20.0%
!! GAAATTGTTCTATATAGTTT+AGG - chr2_2:10519256-10519275 None:intergenic 20.0%
!! TATATAGAACAATTTCAGAT+TGG + chr2_2:10519260-10519279 Msa0237380:intron 20.0%
!! TTAACATAGTGCTATATTTA+AGG - chr2_2:10519439-10519458 None:intergenic 20.0%
!!! GTAATAAATTTGTTGACAAT+TGG + chr2_2:10519509-10519528 Msa0237380:intron 20.0%
!! TTTCCTGAGAAATTATTAAA+GGG - chr2_2:10519798-10519817 None:intergenic 20.0%
!! ATTTCCTGAGAAATTATTAA+AGG - chr2_2:10519799-10519818 None:intergenic 20.0%
!! ATAAGAGTTTGCAAATATTA+CGG - chr2_2:10519938-10519957 None:intergenic 20.0%
!!! AGAAAATATGAGATATTTTC+AGG - chr2_2:10520326-10520345 None:intergenic 20.0%
!! GAATGAGCAATATATATATA+TGG + chr2_2:10520842-10520861 Msa0237380:three_prime_UTR 20.0%
!! AGCAATATATATATATGGAT+CGG + chr2_2:10520847-10520866 Msa0237380:three_prime_UTR 20.0%
!!! CATTAGTTATCAAATTCTTT+TGG + chr2_2:10520982-10521001 Msa0237380:three_prime_UTR 20.0%
!! TGATAATCTAAAGTTCAGTA+TGG + chr2_2:10515196-10515215 Msa0237380:intron 25.0%
! CTATTAAAAACAAGTCATCT+TGG - chr2_2:10515278-10515297 None:intergenic 25.0%
!! TGAATGTATGATGTGATTTT+TGG - chr2_2:10515651-10515670 None:intergenic 25.0%
! TACATTACATGTTATCGAAA+GGG + chr2_2:10516069-10516088 Msa0237380:intron 25.0%
! AATACGTCAAAAATAGATGT+AGG - chr2_2:10516262-10516281 None:intergenic 25.0%
! TAGATCACTATCAATTATCA+GGG + chr2_2:10516509-10516528 Msa0237380:intron 25.0%
!!! GTATTTTTGGAATTTTTGCA+GGG - chr2_2:10516583-10516602 None:intergenic 25.0%
! ATATTCATATCGTCTTTGTT+CGG - chr2_2:10516663-10516682 None:intergenic 25.0%
! TTTGTTCGGATTATAATTTC+CGG - chr2_2:10516860-10516879 None:intergenic 25.0%
! ATATTCATTTCGTCTTTGTT+CGG - chr2_2:10516874-10516893 None:intergenic 25.0%
!! ACTTGTTTAAGGCTATAAAT+AGG - chr2_2:10517097-10517116 None:intergenic 25.0%
!! TGCATAATTTTATGAGAAAC+AGG + chr2_2:10517549-10517568 Msa0237380:intron 25.0%
!! TCAACAGGATTTTGTATTAT+AGG + chr2_2:10517583-10517602 Msa0237380:CDS 25.0%
!! TTTTATTCAATCATGTTTGG+AGG + chr2_2:10517840-10517859 Msa0237380:intron 25.0%
! TAAGTGTATTGAATGTAAGA+TGG - chr2_2:10518033-10518052 None:intergenic 25.0%
! TCTAACAAAAATCAGCATAA+CGG + chr2_2:10518194-10518213 Msa0237380:intron 25.0%
! TAATAGGAAGTCTCATAAAT+TGG + chr2_2:10518405-10518424 Msa0237380:CDS 25.0%
! TAGTTTATATGCGAAAAGTT+TGG + chr2_2:10518709-10518728 Msa0237380:intron 25.0%
! AAGAATTTCAACTAGCATTA+AGG + chr2_2:10518929-10518948 Msa0237380:CDS 25.0%
!! AAATCCAAAAACTTAGTCTT+AGG - chr2_2:10519133-10519152 None:intergenic 25.0%
! AATCTGTTTGATTACTCTAA+AGG + chr2_2:10519228-10519247 Msa0237380:intron 25.0%
! ATCTGTTTGATTACTCTAAA+GGG + chr2_2:10519229-10519248 Msa0237380:intron 25.0%
!! TAATTGTTGACTAAGTAACT+TGG + chr2_2:10519456-10519475 Msa0237380:intron 25.0%
! GCAAATTTCTCATTCTTAAA+TGG - chr2_2:10519553-10519572 None:intergenic 25.0%
!! CCTGATTATGTTACAATTTT+CGG - chr2_2:10519600-10519619 None:intergenic 25.0%
! CGAAAATTGTAACATAATCA+GGG + chr2_2:10519598-10519617 Msa0237380:intron 25.0%
! TAACGCAATTGAAAATTTGA+AGG + chr2_2:10519641-10519660 Msa0237380:intron 25.0%
! TTGAAGGAGATTATATAAAG+AGG + chr2_2:10519657-10519676 Msa0237380:intron 25.0%
! ATTATATAAAGAGGTCCTAT+AGG + chr2_2:10519666-10519685 Msa0237380:intron 25.0%
! TTATATAAAGAGGTCCTATA+GGG + chr2_2:10519667-10519686 Msa0237380:intron 25.0%
! CTCATCTTTATGATTTCAAA+TGG + chr2_2:10520151-10520170 Msa0237380:intron 25.0%
!!! AAAAGTACTTTTCTTATTGC+AGG + chr2_2:10520488-10520507 Msa0237380:intron 25.0%
!! CTTTCAATTTTCTTATGAGT+TGG + chr2_2:10520592-10520611 Msa0237380:CDS 25.0%
! TACAAATAGAATGGTTAAGA+GGG - chr2_2:10520755-10520774 None:intergenic 25.0%
!! TACTTTTGCTACAAATAGAA+TGG - chr2_2:10520764-10520783 None:intergenic 25.0%
!! AAATTCTTTTGGATCCATTT+AGG + chr2_2:10520993-10521012 Msa0237380:three_prime_UTR 25.0%
! TTAAGTAAATTACAACATCC+AGG - chr2_2:10521076-10521095 None:intergenic 25.0%
! TCAGATAAAAGTGTGGAAAA+TGG + chr2_2:10514988-10515007 Msa0237380:CDS 30.0%
!! GTTTGTGGTTCTTTTTCATT+TGG + chr2_2:10515048-10515067 Msa0237380:CDS 30.0%
TATTATTGGCAATTGGCAAT+TGG + chr2_2:10515103-10515122 Msa0237380:intron 30.0%
! ATCCTTCAGTTTTCACATAA+AGG + chr2_2:10515169-10515188 Msa0237380:intron 30.0%
AAACATTTCAACCATGTGAT+TGG - chr2_2:10515332-10515351 None:intergenic 30.0%
AGGTAAAAAGAATTGCTGTA+TGG + chr2_2:10515612-10515631 Msa0237380:intron 30.0%
GGTAAAAAGAATTGCTGTAT+GGG + chr2_2:10515613-10515632 Msa0237380:intron 30.0%
!!! GTATGATGTGATTTTTGGTT+TGG - chr2_2:10515646-10515665 None:intergenic 30.0%
! CTAGTTTCTATTTTGTGATC+AGG + chr2_2:10515716-10515735 Msa0237380:intron 30.0%
! TTTCTATTTTGTGATCAGGT+GGG + chr2_2:10515720-10515739 Msa0237380:intron 30.0%
CTTTCGATAACATGTAATGT+AGG - chr2_2:10516070-10516089 None:intergenic 30.0%
CTACATTACATGTTATCGAA+AGG + chr2_2:10516068-10516087 Msa0237380:intron 30.0%
! GTTTTATAGACTTATCAGAC+TGG + chr2_2:10516091-10516110 Msa0237380:intron 30.0%
TATGACCTATTACATGTCAT+AGG - chr2_2:10516379-10516398 None:intergenic 30.0%
!! AAAAAAAGTGTCTAGCTTCA+TGG - chr2_2:10516419-10516438 None:intergenic 30.0%
GTAGATCACTATCAATTATC+AGG + chr2_2:10516508-10516527 Msa0237380:intron 30.0%
!!! GGTATTTTTGGAATTTTTGC+AGG - chr2_2:10516584-10516603 None:intergenic 30.0%
AAAAATTCCAAAAATACCCC+TGG + chr2_2:10516586-10516605 Msa0237380:intron 30.0%
ATTCGGAAACACTAACAATA+TGG - chr2_2:10516632-10516651 None:intergenic 30.0%
! TTTAAGTATTGTAGGAGTGT+CGG - chr2_2:10517009-10517028 None:intergenic 30.0%
! TATAGCCTTAAACAAGTCAT+AGG + chr2_2:10517100-10517119 Msa0237380:intron 30.0%
!! AATGACCTATGACTTGTTTA+AGG - chr2_2:10517108-10517127 None:intergenic 30.0%
!! GCTTCTTTTGAAAAATTGCT+TGG - chr2_2:10517204-10517223 None:intergenic 30.0%
TATTCTAACAACAGACATTC+CGG - chr2_2:10517256-10517275 None:intergenic 30.0%
!!! ACATAATATGTTTTGGGGAT+TGG + chr2_2:10517364-10517383 Msa0237380:intron 30.0%
!!! GTTTTCAATGTTTGGTTCTT+TGG + chr2_2:10517389-10517408 Msa0237380:intron 30.0%
! CAGGATTTTGTATTATAGGA+TGG + chr2_2:10517587-10517606 Msa0237380:CDS 30.0%
! TTTTTCACAGGATATGGAAT+TGG + chr2_2:10517762-10517781 Msa0237380:CDS 30.0%
AATTGGAGTTATCTCATATG+TGG + chr2_2:10517779-10517798 Msa0237380:CDS 30.0%
TGATTTGAACGGTAAATTCA+AGG - chr2_2:10517985-10518004 None:intergenic 30.0%
CATTCATCAAGTGATTTGAA+CGG - chr2_2:10517996-10518015 None:intergenic 30.0%
! TGGTTCTCTGAAAATGATTA+TGG - chr2_2:10518059-10518078 None:intergenic 30.0%
CAATCAGTATGTGTTTAGTT+TGG - chr2_2:10518115-10518134 None:intergenic 30.0%
!! GCTATTTCTGCTATATATAC+TGG - chr2_2:10518228-10518247 None:intergenic 30.0%
ATAGCACCAAAAAATCTTAG+AGG + chr2_2:10518243-10518262 Msa0237380:CDS 30.0%
TTGCAGCTTATGATTGTTAT+TGG + chr2_2:10518365-10518384 Msa0237380:intron 30.0%
!! ACTCTTGATTTGATTTTGCT+TGG + chr2_2:10518518-10518537 Msa0237380:intron 30.0%
AACTAGCATTAAGGAAACTA+CGG + chr2_2:10518938-10518957 Msa0237380:CDS 30.0%
TGATGAAGCTAATGAAATTC+TGG + chr2_2:10518981-10519000 Msa0237380:CDS 30.0%
CTTGATCAGTTAAGAAAGTT+TGG - chr2_2:10519013-10519032 None:intergenic 30.0%
AGCAAAAATGAGTTCAGATA+AGG - chr2_2:10519078-10519097 None:intergenic 30.0%
!! CTGAACTCATTTTTGCTTAT+AGG + chr2_2:10519081-10519100 Msa0237380:intron 30.0%
CAACAATCTGTTGGAATTAA+TGG + chr2_2:10519302-10519321 Msa0237380:CDS 30.0%
CATAGTGCTATATTTAAGGA+CGG - chr2_2:10519435-10519454 None:intergenic 30.0%
CCGAAAATTGTAACATAATC+AGG + chr2_2:10519597-10519616 Msa0237380:intron 30.0%
!! TCCTTTATAACTTGATTTGC+AGG + chr2_2:10519717-10519736 Msa0237380:intron 30.0%
!! CCTTTATAACTTGATTTGCA+GGG + chr2_2:10519718-10519737 Msa0237380:intron 30.0%
GATCCCTTTAATAATTTCTC+AGG + chr2_2:10519792-10519811 Msa0237380:intron 30.0%
GCAAATATTACGGTTATAAG+AGG - chr2_2:10519928-10519947 None:intergenic 30.0%
! TACATAGCAGCATTTTCAAT+TGG + chr2_2:10520361-10520380 Msa0237380:CDS 30.0%
! ACATAGCAGCATTTTCAATT+GGG + chr2_2:10520362-10520381 Msa0237380:CDS 30.0%
! AGCTAAACCATTACGATTTT+TGG - chr2_2:10520444-10520463 None:intergenic 30.0%
TGATTATGTGCTTAATTACC+AGG - chr2_2:10520624-10520643 None:intergenic 30.0%
!!! ATTGTATTGTTTTTGTGGAC+AGG + chr2_2:10520703-10520722 Msa0237380:intron 30.0%
CTACAAATAGAATGGTTAAG+AGG - chr2_2:10520756-10520775 None:intergenic 30.0%
CAAAACATTGGAAGAAATTC+AGG + chr2_2:10520801-10520820 Msa0237380:CDS 30.0%
TGGATCGGTTATATACATTA+TGG + chr2_2:10520862-10520881 Msa0237380:three_prime_UTR 30.0%
TGATAACTAATGCCGATAAT+TGG - chr2_2:10520974-10520993 None:intergenic 30.0%
CAAAGCATAGATAGAATAAC+AGG + chr2_2:10521021-10521040 Msa0237380:three_prime_UTR 30.0%
TTTGAACCAAGATGTCATTA+AGG + chr2_2:10521050-10521069 Msa0237380:three_prime_UTR 30.0%
ATTGAGGATGGAGAAACTAA+TGG + chr2_2:10514904-10514923 Msa0237380:CDS 35.0%
TTGAGGATGGAGAAACTAAT+GGG + chr2_2:10514905-10514924 Msa0237380:CDS 35.0%
CAAGAACCTTTCATTCAACA+AGG + chr2_2:10514940-10514959 Msa0237380:CDS 35.0%
ACCTTTCATTCAACAAGGAA+AGG + chr2_2:10514945-10514964 Msa0237380:CDS 35.0%
TCCTTTCCTTGTTGAATGAA+AGG - chr2_2:10514949-10514968 None:intergenic 35.0%
AGTTGGATCAGATAAAAGTG+TGG + chr2_2:10514981-10515000 Msa0237380:CDS 35.0%
GTCCTTTATGTGAAAACTGA+AGG - chr2_2:10515174-10515193 None:intergenic 35.0%
AGCATATGAATCCAATCACA+TGG + chr2_2:10515318-10515337 Msa0237380:intron 35.0%
! GTTTCTATTTTGTGATCAGG+TGG + chr2_2:10515719-10515738 Msa0237380:intron 35.0%
TAGATTAAGATCATCCCTGA+TGG - chr2_2:10515769-10515788 None:intergenic 35.0%
TCTTAATCTATCTCTTGCTG+AGG + chr2_2:10515779-10515798 Msa0237380:CDS 35.0%
CACATGTGAATATGTGATAG+AGG - chr2_2:10515969-10515988 None:intergenic 35.0%
ATGAGTGTAACAACGAGAAT+AGG + chr2_2:10516013-10516032 Msa0237380:intron 35.0%
! ATTGGCCTATGACATGTAAT+AGG + chr2_2:10516371-10516390 Msa0237380:intron 35.0%
TGGGAAAAGTAACACTCTAA+TGG - chr2_2:10516540-10516559 None:intergenic 35.0%
ATGGTCCAGAAAACATAATC+CGG - chr2_2:10516613-10516632 None:intergenic 35.0%
TGTGTCTTTCTTTGATGTCA+AGG + chr2_2:10516685-10516704 Msa0237380:intron 35.0%
GTGTCTTTCTTTGATGTCAA+GGG + chr2_2:10516686-10516705 Msa0237380:intron 35.0%
AATAGCATTTCAGCTTGTGT+GGG - chr2_2:10516735-10516754 None:intergenic 35.0%
!!! AAGTTTTGTAGGAGTGTTTG+TGG - chr2_2:10516795-10516814 None:intergenic 35.0%
TGTGTCTTTCTTTGATGTCA+AGG + chr2_2:10516685-10516704 Msa0237380:intron 35.0%
GTGTCTTTCTTTGATGTCAA+GGG + chr2_2:10516686-10516705 Msa0237380:intron 35.0%
AATAGCATTTCAGCTTGTGT+GGG - chr2_2:10516735-10516754 None:intergenic 35.0%
TGAAGAAAATGGAAGGAAAG+AGG + chr2_2:10517034-10517053 Msa0237380:intron 35.0%
!! GAAAGAGTGTCATCAATTAG+TGG - chr2_2:10517173-10517192 None:intergenic 35.0%
ACATTCCGGAATGTATAATC+CGG - chr2_2:10517242-10517261 None:intergenic 35.0%
! GATTGGCAGTTTTCAATGTT+TGG + chr2_2:10517381-10517400 Msa0237380:intron 35.0%
AGTTCTTACACACTTGACTT+GGG + chr2_2:10517735-10517754 Msa0237380:CDS 35.0%
!! TGCATGCAGTGTTACTTAAT+TGG + chr2_2:10518133-10518152 Msa0237380:intron 35.0%
!! AAAAATCAGCATAACGGATC+AGG + chr2_2:10518200-10518219 Msa0237380:intron 35.0%
!!! AGTCCTCCTCTAAGATTTTT+TGG - chr2_2:10518252-10518271 None:intergenic 35.0%
!! TTGATTTGATTTTGCTTGGC+TGG + chr2_2:10518522-10518541 Msa0237380:intron 35.0%
!!! TGCACAATTTTTTCAGGCAA+AGG + chr2_2:10518894-10518913 Msa0237380:intron 35.0%
!!! CAATTTTTTCAGGCAAAGGT+TGG + chr2_2:10518898-10518917 Msa0237380:intron 35.0%
ACTAGCATTAAGGAAACTAC+GGG + chr2_2:10518939-10518958 Msa0237380:CDS 35.0%
!! CCAAAAACTTAGTCTTAGGA+AGG - chr2_2:10519129-10519148 None:intergenic 35.0%
! CCTTCCTAAGACTAAGTTTT+TGG + chr2_2:10519126-10519145 Msa0237380:CDS 35.0%
GAACAATTTCAGATTGGAGT+TGG + chr2_2:10519266-10519285 Msa0237380:intron 35.0%
TCAGATTGGAGTTGGATTAA+TGG + chr2_2:10519274-10519293 Msa0237380:intron 35.0%
ATGGCATTTCAACAATCTGT+TGG + chr2_2:10519293-10519312 Msa0237380:CDS 35.0%
TCTGTTGGAATTAATGGCAT+AGG + chr2_2:10519308-10519327 Msa0237380:CDS 35.0%
! AATGAATTGCATGCTGATTG+TGG + chr2_2:10519371-10519390 Msa0237380:intron 35.0%
GTAACATAATCAGGGTATGT+TGG + chr2_2:10519606-10519625 Msa0237380:intron 35.0%
CCCTGCAAATCAAGTTATAA+AGG - chr2_2:10519721-10519740 None:intergenic 35.0%
CTGTATACATGCATAAGCTA+TGG - chr2_2:10519766-10519785 None:intergenic 35.0%
CATAGCTTATGCATGTATAC+AGG + chr2_2:10519764-10519783 Msa0237380:CDS 35.0%
TCCAGACTTATCCATCAAAA+TGG - chr2_2:10519899-10519918 None:intergenic 35.0%
GCAAAGGGAATGAGAAATTT+AGG + chr2_2:10519977-10519996 Msa0237380:intron 35.0%
! TTCTTAGGCTGCTTTATAAC+CGG + chr2_2:10520048-10520067 Msa0237380:CDS 35.0%
TAGACTTGCCTTGAAAAAGA+AGG - chr2_2:10520079-10520098 None:intergenic 35.0%
TGGATCAGAATCAAAGCTTA+TGG + chr2_2:10520171-10520190 Msa0237380:intron 35.0%
CACAACACCAAAAATCGTAA+TGG + chr2_2:10520434-10520453 Msa0237380:intron 35.0%
GTGTTTCCGATAAATGTGAA+AGG + chr2_2:10520510-10520529 Msa0237380:CDS 35.0%
GCAGTTCCTTTCACATTTAT+CGG - chr2_2:10520519-10520538 None:intergenic 35.0%
ATAAATGTGAAAGGAACTGC+TGG + chr2_2:10520519-10520538 Msa0237380:CDS 35.0%
!! GGTACTATGTTTTTGTATGC+TGG + chr2_2:10520724-10520743 Msa0237380:intron 35.0%
!! ATGTTTTGCCTTTGGTTTCA+GGG - chr2_2:10520789-10520808 None:intergenic 35.0%
!! AATGTTTTGCCTTTGGTTTC+AGG - chr2_2:10520790-10520809 None:intergenic 35.0%
TGAAACCAAAGGCAAAACAT+TGG + chr2_2:10520789-10520808 Msa0237380:CDS 35.0%
! TTCTTCCAATGTTTTGCCTT+TGG - chr2_2:10520797-10520816 None:intergenic 35.0%
TATGCTTTGTCTGTCCTAAA+TGG - chr2_2:10521010-10521029 None:intergenic 35.0%
AAGGATGCTTGTGAAGAAGT+TGG + chr2_2:10514964-10514983 Msa0237380:CDS 40.0%
AGTGTGGAAAATGGATCCAT+TGG + chr2_2:10514997-10515016 Msa0237380:CDS 40.0%
GGAAAATGGATCCATTGGAA+TGG + chr2_2:10515002-10515021 Msa0237380:CDS 40.0%
!! AGCACATTTGTTGCTGTTTG+TGG + chr2_2:10515033-10515052 Msa0237380:CDS 40.0%
!!! GTGTTACTTTTCCCACCTTA+TGG + chr2_2:10516545-10516564 Msa0237380:intron 40.0%
AGAAAACATAATCCGGACCA+GGG - chr2_2:10516606-10516625 None:intergenic 40.0%
CTTGTGTGGGGTTCATATAA+CGG - chr2_2:10516722-10516741 None:intergenic 40.0%
ATAGCATTTCAGCTTGTGTG+GGG - chr2_2:10516734-10516753 None:intergenic 40.0%
CAATAGCATTTCAGCTTGTG+TGG - chr2_2:10516736-10516755 None:intergenic 40.0%
ACAAGCTGAAATGCTATTGC+AGG + chr2_2:10516737-10516756 Msa0237380:intron 40.0%
CAAGCTGAAATGCTATTGCA+GGG + chr2_2:10516738-10516757 Msa0237380:intron 40.0%
AATGCTATTGCAGGGTTCAT+AGG + chr2_2:10516746-10516765 Msa0237380:intron 40.0%
TATTGCAGGGTTCATAGGAA+CGG + chr2_2:10516751-10516770 Msa0237380:intron 40.0%
TGAAGAGAATGGCAGAAAAG+AGG + chr2_2:10516823-10516842 Msa0237380:intron 40.0%
AAAAGAGGTGAAGAGAGTTC+CGG + chr2_2:10516838-10516857 Msa0237380:intron 40.0%
CTTGTGTGGGGTTCATATAA+CGG - chr2_2:10516722-10516741 None:intergenic 40.0%
ATAGCATTTCAGCTTGTGTG+GGG - chr2_2:10516734-10516753 None:intergenic 40.0%
CAATAGCATTTCAGCTTGTG+TGG - chr2_2:10516736-10516755 None:intergenic 40.0%
ACAAGCTGAAATGCTATTGC+AGG + chr2_2:10516737-10516756 Msa0237380:intron 40.0%
CAAGCTGAAATGCTATTGCA+GGG + chr2_2:10516738-10516757 Msa0237380:intron 40.0%
AATGCTATTGCAGGGTTCAT+AGG + chr2_2:10516746-10516765 Msa0237380:intron 40.0%
TATTGCAGGGTTCATAGGAA+CGG + chr2_2:10516751-10516770 Msa0237380:intron 40.0%
GTCATCAATTAGTGGTTGGA+CGG - chr2_2:10517165-10517184 None:intergenic 40.0%
GAGTGTCATCAATTAGTGGT+TGG - chr2_2:10517169-10517188 None:intergenic 40.0%
GCATTCCGGATTATACATTC+CGG + chr2_2:10517234-10517253 Msa0237380:intron 40.0%
!! TTTGGTTCTTTGGTGACCAT+TGG + chr2_2:10517399-10517418 Msa0237380:CDS 40.0%
ATGCTTGGAGCTATAACAAG+TGG + chr2_2:10517426-10517445 Msa0237380:CDS 40.0%
GGTCGAGTTACTGATATCAT+TGG + chr2_2:10517447-10517466 Msa0237380:CDS 40.0%
GAGTTACTGATATCATTGGC+AGG + chr2_2:10517451-10517470 Msa0237380:CDS 40.0%
ACTGATATCATTGGCAGGAA+AGG + chr2_2:10517456-10517475 Msa0237380:CDS 40.0%
CTGATATCATTGGCAGGAAA+GGG + chr2_2:10517457-10517476 Msa0237380:CDS 40.0%
TGATATCATTGGCAGGAAAG+GGG + chr2_2:10517458-10517477 Msa0237380:CDS 40.0%
CAGGCTATGAGAATTTCAAC+AGG + chr2_2:10517568-10517587 Msa0237380:intron 40.0%
GAGTTCTTACACACTTGACT+TGG + chr2_2:10517734-10517753 Msa0237380:intron 40.0%
! GGAAGGTTTTTCACAGGATA+TGG + chr2_2:10517756-10517775 Msa0237380:CDS 40.0%
GCACCAAAAAATCTTAGAGG+AGG + chr2_2:10518246-10518265 Msa0237380:CDS 40.0%
AGGACTTGCAACAACAAATC+AGG + chr2_2:10518266-10518285 Msa0237380:CDS 40.0%
TTGCAACAACAAATCAGGTG+AGG + chr2_2:10518271-10518290 Msa0237380:intron 40.0%
CTAGCATTAAGGAAACTACG+GGG + chr2_2:10518940-10518959 Msa0237380:CDS 40.0%
ACAGGTTCCATTTACCATGT+TGG + chr2_2:10519870-10519889 Msa0237380:intron 40.0%
CAGGTTCCATTTACCATGTT+GGG + chr2_2:10519871-10519890 Msa0237380:intron 40.0%
!! GCCATTTTGATGGATAAGTC+TGG + chr2_2:10519895-10519914 Msa0237380:CDS 40.0%
TCAACTACATCTGCATGCAA+AGG + chr2_2:10519961-10519980 Msa0237380:intron 40.0%
CAACTACATCTGCATGCAAA+GGG + chr2_2:10519962-10519981 Msa0237380:intron 40.0%
! TAATTTCAGGTCTCTGCTAG+TGG + chr2_2:10520021-10520040 Msa0237380:intron 40.0%
TCTGCTAGTGGAACATTCTT+AGG + chr2_2:10520033-10520052 Msa0237380:CDS 40.0%
CTTGAAAAAGAAGGCAACTC+CGG - chr2_2:10520070-10520089 None:intergenic 40.0%
ATCAAAGCTTATGGCTTGAG+TGG + chr2_2:10520180-10520199 Msa0237380:CDS 40.0%
TCAAAGCTTATGGCTTGAGT+GGG + chr2_2:10520181-10520200 Msa0237380:CDS 40.0%
ATTAGCAGTTGCAGGTGTAT+TGG + chr2_2:10520211-10520230 Msa0237380:CDS 40.0%
AGGAGGAGATTCAAGAATTG+AGG - chr2_2:10520248-10520267 None:intergenic 40.0%
! AGCAGCATTTTCAATTGGGT+TGG + chr2_2:10520366-10520385 Msa0237380:CDS 40.0%
! GCAGCATTTTCAATTGGGTT+GGG + chr2_2:10520367-10520386 Msa0237380:CDS 40.0%
AAAGTAGTCCCTGAAACCAA+AGG + chr2_2:10520778-10520797 Msa0237380:CDS 40.0%
ATCAAGCTATAAAGCAGACC+TGG + chr2_2:10520941-10520960 Msa0237380:three_prime_UTR 40.0%
TGAGCAGCATACGGATATTG+AGG + chr2_2:10514888-10514907 Msa0237380:CDS 45.0%
CAGCATACGGATATTGAGGA+TGG + chr2_2:10514892-10514911 Msa0237380:CDS 45.0%
GCTAAGCAGAACCATTCCAA+TGG - chr2_2:10515016-10515035 None:intergenic 45.0%
ATAGGCTAGACAGACTCACA+TGG + chr2_2:10516031-10516050 Msa0237380:intron 45.0%
TTCCAAAAATACCCCTGGTC+CGG + chr2_2:10516591-10516610 Msa0237380:intron 45.0%
GAAAACATAATCCGGACCAG+GGG - chr2_2:10516605-10516624 None:intergenic 45.0%
CAGAAAACATAATCCGGACC+AGG - chr2_2:10516607-10516626 None:intergenic 45.0%
! CTGGTCCGGATTATGTTTTC+TGG + chr2_2:10516605-10516624 Msa0237380:intron 45.0%
!! TAGGAGTGTTTGTGGTGTCA+TGG - chr2_2:10516787-10516806 None:intergenic 45.0%
!! AAGTATTGTAGGAGTGTCGG+TGG - chr2_2:10517006-10517025 None:intergenic 45.0%
! AAGCCAATGCTGAAGCATTC+CGG + chr2_2:10517220-10517239 Msa0237380:intron 45.0%
AATCCGGAATGCTTCAGCAT+TGG - chr2_2:10517226-10517245 None:intergenic 45.0%
GCTAGCTGTCTTCTTCTCTA+AGG + chr2_2:10517609-10517628 Msa0237380:CDS 45.0%
!! CTTACACACTTGACTTGGGA+AGG + chr2_2:10517739-10517758 Msa0237380:CDS 45.0%
! GACTTGGGAAGGTTTTTCAC+AGG + chr2_2:10517750-10517769 Msa0237380:CDS 45.0%
! TGCTTGGCTGGAACTTTTGA+AGG + chr2_2:10518534-10518553 Msa0237380:intron 45.0%
GCAAGCAAATGCAAGGAACT+AGG - chr2_2:10518560-10518579 None:intergenic 45.0%
CCAACAAGCAAGCAAATGCA+AGG - chr2_2:10518567-10518586 None:intergenic 45.0%
CCTTGCATTTGCTTGCTTGT+TGG + chr2_2:10518564-10518583 Msa0237380:CDS 45.0%
TCATTCCTGAGTCTCCTAGA+TGG + chr2_2:10518595-10518614 Msa0237380:CDS 45.0%
CAGAGCGCACATATTTGCTT+TGG - chr2_2:10519159-10519178 None:intergenic 45.0%
ACTAGCTCATCTGTCCCTAT+AGG - chr2_2:10519684-10519703 None:intergenic 45.0%
! AGCTATGGTACCAGCTTTTG+CGG - chr2_2:10519751-10519770 None:intergenic 45.0%
ATGGCTCCCAACATGGTAAA+TGG - chr2_2:10519880-10519899 None:intergenic 45.0%
CATCAAAATGGCTCCCAACA+TGG - chr2_2:10519887-10519906 None:intergenic 45.0%
!! CATGTTGGGAGCCATTTTGA+TGG + chr2_2:10519885-10519904 Msa0237380:CDS 45.0%
!! CGGAGTTGCCTTCTTTTTCA+AGG + chr2_2:10520068-10520087 Msa0237380:CDS 45.0%
ACACCTGCAACTGCTAATGT+TGG - chr2_2:10520209-10520228 None:intergenic 45.0%
TGAATCTCCTCCTCTTTGCA+TGG + chr2_2:10520255-10520274 Msa0237380:intron 45.0%
ACTGTATCAGCCATGCAAAG+AGG - chr2_2:10520268-10520287 None:intergenic 45.0%
GAAAGGAACTGCTGGAAGTT+TGG + chr2_2:10520527-10520546 Msa0237380:CDS 45.0%
!! TGCTGGAAGTTTGGTGGTTT+TGG + chr2_2:10520536-10520555 Msa0237380:CDS 45.0%
! CTTATGAGTTGGAGTTCTCC+TGG + chr2_2:10520603-10520622 Msa0237380:CDS 45.0%
GACATTGCTTCTGTCTCTCT+TGG + chr2_2:10520884-10520903 Msa0237380:three_prime_UTR 45.0%
CCTGGACACTGTCCAATTAT+CGG + chr2_2:10520959-10520978 Msa0237380:three_prime_UTR 45.0%
ACCAAGATGTCATTAAGGCC+TGG + chr2_2:10521055-10521074 Msa0237380:three_prime_UTR 45.0%
TCCAGGCCTTAATGACATCT+TGG - chr2_2:10521059-10521078 None:intergenic 45.0%
!! TTATAAATAAGAATTTAAAT+TGG - chr2_2:10515494-10515513 None:intergenic 5.0%
!! ATTAAATATATCAAAATATT+GGG - chr2_2:10520913-10520932 None:intergenic 5.0%
!!! ATCCGGACCAGGGGTATTTT+TGG - chr2_2:10516596-10516615 None:intergenic 50.0%
GTGACCATTGGTGCAATGCT+TGG + chr2_2:10517411-10517430 Msa0237380:CDS 50.0%
! AGCTCCAAGCATTGCACCAA+TGG - chr2_2:10517418-10517437 None:intergenic 50.0%
AGTCTCCTAGATGGCTGGTA+AGG + chr2_2:10518604-10518623 Msa0237380:intron 50.0%
TCCTAGATGGCTGGTAAGGA+AGG + chr2_2:10518608-10518627 Msa0237380:intron 50.0%
TCCTTCCTTACCAGCCATCT+AGG - chr2_2:10518612-10518631 None:intergenic 50.0%
! GCTGAGACTTTTGTAGCAGC+TGG + chr2_2:10519341-10519360 Msa0237380:CDS 50.0%
AGGGACAGATGAGCTAGTAG+TGG + chr2_2:10519686-10519705 Msa0237380:intron 50.0%
GTGCCAACATTAGCAGTTGC+AGG + chr2_2:10520203-10520222 Msa0237380:CDS 50.0%
GTATCAGCCATGCAAAGAGG+AGG - chr2_2:10520265-10520284 None:intergenic 50.0%
!! TTGGGTTGGGATCAGTTCCT+TGG + chr2_2:10520380-10520399 Msa0237380:CDS 50.0%
! TGGGTTGGGATCAGTTCCTT+GGG + chr2_2:10520381-10520400 Msa0237380:CDS 50.0%
! TCCTTGGGTGATGATGTCTG+AGG + chr2_2:10520396-10520415 Msa0237380:CDS 50.0%
ACCTCAGACATCATCACCCA+AGG - chr2_2:10520400-10520419 None:intergenic 50.0%
AGGAACTGCTGGAAGTTTGG+TGG + chr2_2:10520530-10520549 Msa0237380:CDS 50.0%
!!! GTTTGGTGGTTTTGGTAGCG+TGG + chr2_2:10520544-10520563 Msa0237380:CDS 50.0%
CCGATAATTGGACAGTGTCC+AGG - chr2_2:10520962-10520981 None:intergenic 50.0%
ACCCACTCAAGCAGCCATCA+GGG + chr2_2:10515752-10515771 Msa0237380:CDS 55.0%
TCCCTGATGGCTGCTTGAGT+GGG - chr2_2:10515756-10515775 None:intergenic 55.0%
ATCCCTGATGGCTGCTTGAG+TGG - chr2_2:10515757-10515776 None:intergenic 55.0%
!! TAGGAGTGTCGGTGGTGTCA+TGG - chr2_2:10516998-10517017 None:intergenic 55.0%
!! TGGCGACAACTAGCTCTAGC+AGG + chr2_2:10518425-10518444 Msa0237380:CDS 55.0%
TCCTGAGTCTCCTAGATGGC+TGG + chr2_2:10518599-10518618 Msa0237380:CDS 55.0%
ACCAGCCATCTAGGAGACTC+AGG - chr2_2:10518603-10518622 None:intergenic 55.0%
GGGCTTTCTTCCGCAAAAGC+TGG + chr2_2:10519738-10519757 Msa0237380:intron 55.0%
!!! GTGGTTTTGGTAGCGTGGCT+AGG + chr2_2:10520549-10520568 Msa0237380:CDS 55.0%
CACCCACTCAAGCAGCCATC+AGG + chr2_2:10515751-10515770 Msa0237380:CDS 60.0%
GCGCGAGAAGGCCATAAGGT+GGG - chr2_2:10516559-10516578 None:intergenic 60.0%
! TTTTTGCAGGGCGCGCGAGA+AGG - chr2_2:10516571-10516590 None:intergenic 60.0%
! TGGTAGCGTGGCTAGGAGCT+TGG + chr2_2:10520556-10520575 Msa0237380:CDS 60.0%
CGCGCGAGAAGGCCATAAGG+TGG - chr2_2:10516560-10516579 None:intergenic 65.0%
GGGCGCGCGAGAAGGCCATA+AGG - chr2_2:10516563-10516582 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 10514880 10521115 10514880 ID=Msa0237380;Name=Msa0237380
chr2_2 mRNA 10514880 10521115 10514880 ID=Msa0237380-mRNA-1;Parent=Msa0237380;Name=Msa0237380-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|1|0.88|1|1|1|18|275|485
chr2_2 exon 10514880 10515077 10514880 ID=Msa0237380-mRNA-1:exon:4560;Parent=Msa0237380-mRNA-1
chr2_2 exon 10515738 10515800 10515738 ID=Msa0237380-mRNA-1:exon:4561;Parent=Msa0237380-mRNA-1
chr2_2 exon 10517390 10517479 10517390 ID=Msa0237380-mRNA-1:exon:4562;Parent=Msa0237380-mRNA-1
chr2_2 exon 10517571 10517630 10517571 ID=Msa0237380-mRNA-1:exon:4563;Parent=Msa0237380-mRNA-1
chr2_2 exon 10517735 10517800 10517735 ID=Msa0237380-mRNA-1:exon:4564;Parent=Msa0237380-mRNA-1
chr2_2 exon 10518222 10518287 10518222 ID=Msa0237380-mRNA-1:exon:4565;Parent=Msa0237380-mRNA-1
chr2_2 exon 10518371 10518446 10518371 ID=Msa0237380-mRNA-1:exon:4566;Parent=Msa0237380-mRNA-1
chr2_2 exon 10518556 10518620 10518556 ID=Msa0237380-mRNA-1:exon:4567;Parent=Msa0237380-mRNA-1
chr2_2 exon 10518910 10519002 10518910 ID=Msa0237380-mRNA-1:exon:4568;Parent=Msa0237380-mRNA-1
chr2_2 exon 10519103 10519183 10519103 ID=Msa0237380-mRNA-1:exon:4569;Parent=Msa0237380-mRNA-1
chr2_2 exon 10519278 10519362 10519278 ID=Msa0237380-mRNA-1:exon:4570;Parent=Msa0237380-mRNA-1
chr2_2 exon 10519739 10519785 10519739 ID=Msa0237380-mRNA-1:exon:4571;Parent=Msa0237380-mRNA-1
chr2_2 exon 10519874 10519936 10519874 ID=Msa0237380-mRNA-1:exon:4572;Parent=Msa0237380-mRNA-1
chr2_2 exon 10520030 10520089 10520030 ID=Msa0237380-mRNA-1:exon:4573;Parent=Msa0237380-mRNA-1
chr2_2 exon 10520179 10520232 10520179 ID=Msa0237380-mRNA-1:exon:4574;Parent=Msa0237380-mRNA-1
chr2_2 exon 10520358 10520417 10520358 ID=Msa0237380-mRNA-1:exon:4575;Parent=Msa0237380-mRNA-1
chr2_2 exon 10520510 10520624 10520510 ID=Msa0237380-mRNA-1:exon:4576;Parent=Msa0237380-mRNA-1
chr2_2 exon 10520725 10521115 10520725 ID=Msa0237380-mRNA-1:exon:4577;Parent=Msa0237380-mRNA-1
chr2_2 CDS 10514880 10515077 10514880 ID=Msa0237380-mRNA-1:cds;Parent=Msa0237380-mRNA-1
chr2_2 CDS 10515738 10515800 10515738 ID=Msa0237380-mRNA-1:cds;Parent=Msa0237380-mRNA-1
chr2_2 CDS 10517390 10517479 10517390 ID=Msa0237380-mRNA-1:cds;Parent=Msa0237380-mRNA-1
chr2_2 CDS 10517571 10517630 10517571 ID=Msa0237380-mRNA-1:cds;Parent=Msa0237380-mRNA-1
chr2_2 CDS 10517735 10517800 10517735 ID=Msa0237380-mRNA-1:cds;Parent=Msa0237380-mRNA-1
chr2_2 CDS 10518222 10518287 10518222 ID=Msa0237380-mRNA-1:cds;Parent=Msa0237380-mRNA-1
chr2_2 CDS 10518371 10518446 10518371 ID=Msa0237380-mRNA-1:cds;Parent=Msa0237380-mRNA-1
chr2_2 CDS 10518556 10518620 10518556 ID=Msa0237380-mRNA-1:cds;Parent=Msa0237380-mRNA-1
chr2_2 CDS 10518910 10519002 10518910 ID=Msa0237380-mRNA-1:cds;Parent=Msa0237380-mRNA-1
chr2_2 CDS 10519103 10519183 10519103 ID=Msa0237380-mRNA-1:cds;Parent=Msa0237380-mRNA-1
chr2_2 CDS 10519278 10519362 10519278 ID=Msa0237380-mRNA-1:cds;Parent=Msa0237380-mRNA-1
chr2_2 CDS 10519739 10519785 10519739 ID=Msa0237380-mRNA-1:cds;Parent=Msa0237380-mRNA-1
chr2_2 CDS 10519874 10519936 10519874 ID=Msa0237380-mRNA-1:cds;Parent=Msa0237380-mRNA-1
chr2_2 CDS 10520030 10520089 10520030 ID=Msa0237380-mRNA-1:cds;Parent=Msa0237380-mRNA-1
chr2_2 CDS 10520179 10520232 10520179 ID=Msa0237380-mRNA-1:cds;Parent=Msa0237380-mRNA-1
chr2_2 CDS 10520358 10520417 10520358 ID=Msa0237380-mRNA-1:cds;Parent=Msa0237380-mRNA-1
chr2_2 CDS 10520510 10520624 10520510 ID=Msa0237380-mRNA-1:cds;Parent=Msa0237380-mRNA-1
chr2_2 CDS 10520725 10520840 10520725 ID=Msa0237380-mRNA-1:cds;Parent=Msa0237380-mRNA-1
chr2_2 three_prime_UTR 10520841 10521115 10520841 ID=Msa0237380-mRNA-1:three_prime_utr;Parent=Msa0237380-mRNA-1
Gene Sequence

>Msa0237380

ATGACAATTGAGCAGCATACGGATATTGAGGATGGAGAAACTAATGGGTTTCAGTATTTGCAAGAACCTTTCATTCAACAAGGAAAGGATGCTTGTGAAGAAGTTGGATCAGATAAAAGTGTGGAAAATGGATCCATTGGAATGGTTCTGCTTAGCACATTTGTTGCTGTTTGTGGTTCTTTTTCATTTGGAACTTGTGTGGGTTATTCAGCACCCACTCAAGCAGCCATCAGGGATGATCTTAATCTATCTCTTGCTGAGTTTTCAATGTTTGGTTCTTTGGTGACCATTGGTGCAATGCTTGGAGCTATAACAAGTGGTCGAGTTACTGATATCATTGGCAGGAAAGGGGCTATGAGAATTTCAACAGGATTTTGTATTATAGGATGGCTAGCTGTCTTCTTCTCTAAGAGTTCTTACACACTTGACTTGGGAAGGTTTTTCACAGGATATGGAATTGGAGTTATCTCATATGTGGTTCCAGTATATATAGCAGAAATAGCACCAAAAAATCTTAGAGGAGGACTTGCAACAACAAATCAGCTTATGATTGTTATTGGATCATCAATGTCATTTTTAATAGGAAGTCTCATAAATTGGCGACAACTAGCTCTAGCAGGCCTAGTTCCTTGCATTTGCTTGCTTGTTGGTCTGTGCTTCATTCCTGAGTCTCCTAGATGGCTGGCAAAGGTTGGTCGTGAAAAAGAATTTCAACTAGCATTAAGGAAACTACGGGGTAAAGACGTTGATATTTCTGATGAAGCTAATGAAATTCTGGATAATATTGAAACTCTTCAAAGCCTTCCTAAGACTAAGTTTTTGGATTTGTTCCAAAGCAAATATGTGCGCTCTGTAGTTATTGGAGTTGGATTAATGGCATTTCAACAATCTGTTGGAATTAATGGCATAGGATTCTATACAGCTGAGACTTTTGTAGCAGCTGGGCTTTCTTCCGCAAAAGCTGGTACCATAGCTTATGCATGTATACAGGTTCCATTTACCATGTTGGGAGCCATTTTGATGGATAAGTCTGGAAGAAAACCTCTTATAACCGTCTCTGCTAGTGGAACATTCTTAGGCTGCTTTATAACCGGAGTTGCCTTCTTTTTCAAGAATCAAAGCTTATGGCTTGAGTGGGTGCCAACATTAGCAGTTGCAGGTGTATTGATCTACATAGCAGCATTTTCAATTGGGTTGGGATCAGTTCCTTGGGTGATGATGTCTGAGGTGTTTCCGATAAATGTGAAAGGAACTGCTGGAAGTTTGGTGGTTTTGGTAGCGTGGCTAGGAGCTTGGATAGTTTCATATACTTTCAATTTTCTTATGAGTTGGAGTTCTCCTGGTACTATGTTTTTGTATGCTGGATGTTCCCTCTTAACCATTCTATTTGTAGCAAAAGTAGTCCCTGAAACCAAAGGCAAAACATTGGAAGAAATTCAGGCTTGCATTAGTTCTTAG
Protein sequence

>Msa0237380

MTIEQHTDIEDGETNGFQYLQEPFIQQGKDACEEVGSDKSVENGSIGMVLLSTFVAVCGSFSFGTCVGYSAPTQAAIRDDLNLSLAEFSMFGSLVTIGAMLGAITSGRVTDIIGRKGAMRISTGFCIIGWLAVFFSKSSYTLDLGRFFTGYGIGVISYVVPVYIAEIAPKNLRGGLATTNQLMIVIGSSMSFLIGSLINWRQLALAGLVPCICLLVGLCFIPESPRWLAKVGREKEFQLALRKLRGKDVDISDEANEILDNIETLQSLPKTKFLDLFQSKYVRSVVIGVGLMAFQQSVGINGIGFYTAETFVAAGLSSAKAGTIAYACIQVPFTMLGAILMDKSGRKPLITVSASGTFLGCFITGVAFFFKNQSLWLEWVPTLAVAGVLIYIAAFSIGLGSVPWVMMSEVFPINVKGTAGSLVVLVAWLGAWIVSYTFNFLMSWSSPGTMFLYAGCSLLTILFVAKVVPETKGKTLEEIQACISS*