AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0277520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0277520 MtrunA17_Chr2g0286721 98.557 485 7 0 1 485 1 485 0.0 967
Msa0277520 MtrunA17_Chr4g0066581 82.172 488 84 1 1 485 1 488 0.0 835
Msa0277520 MtrunA17_Chr7g0259221 56.495 485 203 4 1 485 1 477 0.0 536
Msa0277520 MtrunA17_Chr7g0259471 54.037 483 214 3 3 485 1 475 0.0 529
Msa0277520 MtrunA17_Chr7g0273281 55.991 434 190 1 52 485 65 497 1.07e-174 500
Msa0277520 MtrunA17_Chr8g0373181 44.142 478 256 4 13 480 6 482 4.32e-138 406
Msa0277520 MtrunA17_Chr1g0155221 43.552 473 254 3 20 480 14 485 3.72e-135 399
Msa0277520 MtrunA17_Chr8g0373191 37.708 480 267 3 7 482 5 456 1.24e-112 340
Msa0277520 MtrunA17_Chr7g0273261 54.185 227 101 2 258 484 15 238 2.03e-79 248
Msa0277520 MtrunA17_Chr5g0404191 46.290 283 140 3 6 281 5 282 4.06e-79 248
Msa0277520 MtrunA17_Chr7g0273271 55.249 181 81 0 48 228 26 206 9.06e-67 213
Msa0277520 MtrunA17_Chr6g0457781 30.998 471 304 7 27 485 83 544 2.62e-59 204
Msa0277520 MtrunA17_Chr1g0213631 34.465 383 239 6 109 480 48 429 8.39e-58 198
Msa0277520 MtrunA17_Chr7g0250881 30.704 469 307 7 26 484 43 503 1.03e-57 199
Msa0277520 MtrunA17_Chr4g0021771 29.857 489 315 9 12 480 19 499 8.59e-57 197
Msa0277520 MtrunA17_Chr1g0213611 34.704 389 233 8 109 480 141 525 5.57e-56 195
Msa0277520 MtrunA17_Chr2g0282031 31.354 421 268 7 77 480 81 497 1.24e-52 186
Msa0277520 MtrunA17_Chr4g0034681 29.515 454 285 9 60 482 41 490 4.39e-52 184
Msa0277520 MtrunA17_Chr4g0039651 27.033 492 319 9 24 481 13 498 9.63e-52 182
Msa0277520 MtrunA17_Chr7g0214451 33.247 388 240 7 107 480 94 476 1.34e-51 182
Msa0277520 MtrunA17_Chr3g0144361 30.485 433 272 8 77 480 56 488 1.49e-50 180
Msa0277520 MtrunA17_Chr4g0036021 28.414 454 285 9 60 480 38 484 7.19e-49 175
Msa0277520 MtrunA17_Chr4g0032021 28.189 486 307 11 30 483 79 554 8.59e-48 173
Msa0277520 MtrunA17_Chr5g0432581 29.655 435 273 11 77 480 47 479 1.03e-46 169
Msa0277520 MtrunA17_Chr4g0004821 30.631 444 284 11 50 480 37 469 1.41e-44 162
Msa0277520 MtrunA17_Chr6g0485661 28.795 448 293 9 50 475 59 502 1.62e-43 160
Msa0277520 MtrunA17_Chr8g0373531 29.613 439 268 13 77 480 47 479 2.72e-43 160
Msa0277520 MtrunA17_Chr8g0390521 28.512 477 297 10 37 480 3 468 1.45e-42 157
Msa0277520 MtrunA17_Chr6g0486021 29.284 461 292 11 38 480 39 483 2.45e-42 157
Msa0277520 MtrunA17_Chr3g0085971 28.538 424 283 9 73 480 66 485 2.90e-39 149
Msa0277520 MtrunA17_Chr3g0115741 26.764 411 272 7 89 479 85 486 2.88e-38 146
Msa0277520 MtrunA17_Chr3g0115721 27.273 407 275 7 89 479 82 483 1.49e-37 144
Msa0277520 MtrunA17_Chr3g0128081 27.386 482 307 13 36 479 9 485 1.12e-36 141
Msa0277520 MtrunA17_Chr3g0078791 27.228 404 260 9 89 479 28 410 1.76e-36 139
Msa0277520 MtrunA17_Chr3g0119401 27.111 450 295 10 55 485 99 534 6.54e-36 139
Msa0277520 MtrunA17_Chr4g0065311 26.869 495 300 16 29 479 2 478 1.22e-35 138
Msa0277520 MtrunA17_Chr1g0205671 26.781 407 276 7 89 479 83 483 2.47e-35 137
Msa0277520 MtrunA17_Chr1g0205681 25.908 413 284 7 87 483 82 488 5.02e-35 137
Msa0277520 MtrunA17_Chr4g0065324 27.295 414 263 12 89 479 88 486 7.29e-35 136
Msa0277520 MtrunA17_Chr2g0303731 31.250 336 214 7 49 368 26 360 7.35e-35 137
Msa0277520 MtrunA17_Chr5g0420841 26.961 408 278 9 89 480 82 485 8.64e-35 136
Msa0277520 MtrunA17_Chr3g0115711 24.505 404 291 6 88 479 81 482 9.16e-35 136
Msa0277520 MtrunA17_Chr5g0394341 27.764 407 272 9 89 479 83 483 1.29e-34 135
Msa0277520 MtrunA17_Chr3g0078971 26.383 470 302 11 48 480 22 484 1.47e-34 135
Msa0277520 MtrunA17_Chr3g0115781 24.939 413 279 8 89 480 84 486 1.62e-34 135
Msa0277520 MtrunA17_Chr5g0403831 26.036 507 315 16 13 480 7 492 1.44e-33 132
Msa0277520 MtrunA17_Chr3g0128171 25.799 407 282 9 89 479 36 438 2.80e-33 131
Msa0277520 MtrunA17_Chr3g0115751 26.521 411 273 7 89 479 87 488 4.83e-33 131
Msa0277520 MtrunA17_Chr1g0205691 28.721 383 257 7 110 479 104 483 7.35e-33 130
Msa0277520 MtrunA17_Chr8g0390141 29.584 409 261 11 89 479 86 485 3.30e-32 129
Msa0277520 MtrunA17_Chr3g0078991 27.654 358 236 9 140 480 134 485 3.49e-32 129
Msa0277520 MtrunA17_Chr5g0417611 25.527 427 292 12 74 479 65 486 1.71e-31 127
Msa0277520 MtrunA17_Chr8g0390261 27.206 408 272 10 89 479 86 485 1.78e-31 127
Msa0277520 MtrunA17_Chr4g0048051 28.165 387 258 9 109 479 103 485 8.72e-31 125
Msa0277520 MtrunA17_Chr1g0164871 25.153 489 324 8 28 480 2 484 1.12e-30 124
Msa0277520 MtrunA17_Chr6g0486681 27.952 415 260 11 89 479 86 485 1.13e-30 124
Msa0277520 MtrunA17_Chr6g0486671 27.952 415 260 11 89 479 86 485 1.13e-30 124
Msa0277520 MtrunA17_Chr3g0121674 30.389 283 189 6 203 479 2 282 1.75e-30 120
Msa0277520 MtrunA17_Chr1g0164851 24.949 489 325 8 28 480 2 484 2.65e-30 124
Msa0277520 MtrunA17_Chr8g0376611 31.250 272 173 6 98 356 11 281 2.76e-30 123
Msa0277520 MtrunA17_Chr8g0376611 36.893 103 56 2 383 480 382 480 6.12e-12 67.8
Msa0277520 MtrunA17_Chr4g0048411 27.020 396 263 8 109 485 103 491 3.25e-30 123
Msa0277520 MtrunA17_Chr2g0303701 29.889 271 177 6 109 368 89 357 1.08e-29 122
Msa0277520 MtrunA17_Chr5g0404181 43.200 125 65 2 361 480 5 128 1.64e-28 109
Msa0277520 MtrunA17_Chr8g0376631 31.008 258 162 6 107 350 87 342 3.14e-28 118
Msa0277520 MtrunA17_Chr8g0376631 35.922 103 57 2 383 480 451 549 3.86e-11 65.5
Msa0277520 MtrunA17_Chr7g0257631 27.791 421 263 14 82 479 116 518 5.94e-28 117
Msa0277520 MtrunA17_Chr5g0445601 27.553 421 264 14 82 479 82 484 7.64e-28 116
Msa0277520 MtrunA17_Chr5g0437021 26.044 407 280 6 89 480 84 484 1.19e-27 115
Msa0277520 MtrunA17_Chr7g0221631 66.667 69 23 0 380 448 47 115 2.20e-27 106
Msa0277520 MtrunA17_Chr2g0290181 28.058 278 183 5 107 368 88 364 1.64e-25 110
Msa0277520 MtrunA17_Chr2g0290181 37.374 99 61 1 383 480 455 553 1.71e-13 72.8
Msa0277520 MtrunA17_Chr8g0376601 28.244 262 172 5 109 356 89 348 8.44e-24 104
Msa0277520 MtrunA17_Chr3g0115731 25.130 386 246 10 107 479 107 462 1.19e-23 103
Msa0277520 MtrunA17_Chr4g0065351 26.647 334 211 10 167 479 1 321 7.29e-23 99.8
Msa0277520 MtrunA17_Chr3g0144261 33.163 196 117 4 77 262 32 223 3.69e-21 97.1
Msa0277520 MtrunA17_Chr3g0144261 28.111 217 140 3 276 479 500 713 1.56e-14 76.3
Msa0277520 MtrunA17_Chr2g0290161 25.000 296 184 8 107 391 21 289 2.65e-18 87.4
Msa0277520 MtrunA17_Chr7g0259451 66.000 50 17 0 399 448 1 50 3.01e-18 78.6
Msa0277520 MtrunA17_Chr5g0434231 32.075 159 88 2 98 255 14 153 9.27e-18 80.5
Msa0277520 MtrunA17_Chr5g0419321 29.070 258 154 7 246 479 479 731 1.98e-17 85.5
Msa0277520 MtrunA17_Chr5g0419321 27.638 199 134 4 63 254 50 245 4.99e-16 80.9
Msa0277520 MtrunA17_Chr5g0407441 29.870 231 141 6 267 479 478 705 1.30e-16 82.8
Msa0277520 MtrunA17_Chr5g0407441 32.500 160 96 4 104 254 61 217 1.18e-14 76.6
Msa0277520 MtrunA17_Chr8g0370151 28.910 211 132 5 283 479 138 344 2.02e-15 77.8
Msa0277520 MtrunA17_Chr3g0146061 34.783 161 97 3 97 249 54 214 2.24e-15 79.0
Msa0277520 MtrunA17_Chr3g0146061 28.440 218 140 3 275 479 509 723 3.21e-15 78.6
Msa0277520 MtrunA17_Chr8g0370141 27.094 203 132 7 66 254 17 217 2.45e-12 68.6
Msa0277520 MtrunA17_Chr8g0356471 23.423 444 265 17 68 476 104 507 4.09e-12 68.2
Msa0277520 MtrunA17_Chr4g0042131 24.359 390 252 12 107 478 45 409 8.63e-12 67.0
Msa0277520 MtrunA17_Chr5g0434251 35.922 103 57 2 383 480 38 136 1.19e-11 62.8
Msa0277520 MtrunA17_Chr8g0353141 25.143 350 211 14 97 423 125 446 4.88e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0277520 AT5G18840.1 70.041 484 138 2 1 483 1 478 0.0 682
Msa0277520 AT2G48020.2 58.963 463 186 2 25 484 1 462 0.0 567
Msa0277520 AT2G48020.1 58.963 463 186 2 25 484 1 462 0.0 567
Msa0277520 AT3G05150.1 54.149 482 207 4 3 483 1 469 0.0 520
Msa0277520 AT3G05150.3 54.149 482 207 4 3 483 1 469 0.0 520
Msa0277520 AT3G05150.2 54.149 482 207 4 3 483 1 469 0.0 520
Msa0277520 AT1G54730.2 54.651 430 194 1 54 483 37 465 5.33e-174 498
Msa0277520 AT1G54730.3 54.135 399 182 1 54 452 37 434 9.91e-160 460
Msa0277520 AT1G54730.5 51.628 430 186 2 54 483 37 444 9.63e-158 455
Msa0277520 AT2G48020.4 57.724 369 152 2 25 390 1 368 2.51e-152 439
Msa0277520 AT1G54730.4 50.877 399 174 2 54 452 37 413 2.69e-143 417
Msa0277520 AT3G20460.1 44.215 484 265 4 3 484 7 487 6.25e-143 419
Msa0277520 AT1G08930.1 44.040 495 263 5 3 485 1 493 1.13e-140 414
Msa0277520 AT1G08930.2 44.040 495 263 5 3 485 1 493 1.13e-140 414
Msa0277520 AT3G05165.3 42.151 465 259 3 20 484 10 464 1.83e-139 409
Msa0277520 AT3G05165.2 42.151 465 259 3 20 484 10 464 1.83e-139 409
Msa0277520 AT3G05165.1 42.151 465 259 3 20 484 10 464 1.83e-139 409
Msa0277520 AT3G05160.1 45.183 436 238 1 49 484 21 455 4.21e-139 408
Msa0277520 AT5G27350.1 46.623 459 242 2 25 483 9 464 4.22e-139 409
Msa0277520 AT2G48020.3 59.337 332 131 2 25 353 1 331 7.88e-139 404
Msa0277520 AT1G54730.9 53.463 361 167 1 54 414 37 396 7.95e-138 403
Msa0277520 AT1G54730.7 53.463 361 167 1 54 414 37 396 7.95e-138 403
Msa0277520 AT1G08920.1 46.347 438 234 1 48 485 31 467 3.01e-137 404
Msa0277520 AT4G04760.1 45.977 435 231 2 50 481 32 465 2.34e-136 402
Msa0277520 AT5G27360.1 46.437 435 232 1 49 483 35 468 6.21e-135 398
Msa0277520 AT1G08920.2 45.618 445 234 2 48 485 31 474 1.51e-134 397
Msa0277520 AT1G75220.1 42.946 482 264 3 10 481 4 484 2.15e-134 397
Msa0277520 AT5G27360.3 43.867 481 251 4 1 481 53 514 3.80e-134 398
Msa0277520 AT4G04750.1 43.722 446 248 2 41 484 28 472 1.33e-131 390
Msa0277520 AT4G04750.2 43.722 446 248 2 41 484 28 472 1.33e-131 390
Msa0277520 AT4G04750.3 43.722 446 248 2 41 484 72 516 4.73e-131 390
Msa0277520 AT3G05155.1 43.982 457 240 4 36 480 3 455 7.37e-129 382
Msa0277520 AT1G08890.1 45.312 448 240 2 33 480 15 457 9.65e-129 382
Msa0277520 AT3G05165.6 42.627 434 239 3 20 453 10 433 1.41e-128 383
Msa0277520 AT1G19450.1 41.909 482 269 3 10 481 5 485 1.67e-128 382
Msa0277520 AT3G05160.3 44.444 405 224 1 80 484 3 406 1.73e-127 377
Msa0277520 AT3G05160.2 44.444 405 224 1 80 484 3 406 1.73e-127 377
Msa0277520 AT1G08920.3 46.883 401 212 1 48 448 31 430 2.91e-126 375
Msa0277520 AT4G04760.3 45.232 409 220 2 80 485 3 410 2.44e-125 372
Msa0277520 AT3G05400.1 43.468 444 250 1 37 480 14 456 2.89e-124 370
Msa0277520 AT1G08900.1 43.908 435 243 1 49 483 25 458 7.19e-124 369
Msa0277520 AT1G08900.2 43.908 435 243 1 49 483 25 458 7.19e-124 369
Msa0277520 AT4G04760.2 43.508 439 233 5 50 481 32 462 1.81e-122 366
Msa0277520 AT1G54730.8 49.861 361 159 2 54 414 37 375 1.18e-121 361
Msa0277520 AT1G54730.11 55.298 302 134 1 54 355 37 337 2.22e-119 353
Msa0277520 AT3G05165.4 41.429 420 236 3 20 439 10 419 3.10e-119 358
Msa0277520 AT3G05165.5 41.429 420 236 3 20 439 10 419 3.10e-119 358
Msa0277520 AT1G08900.5 43.405 417 235 1 67 483 1 416 5.01e-118 353
Msa0277520 AT1G08900.3 42.989 435 239 2 49 483 25 450 2.77e-117 352
Msa0277520 AT3G05400.2 42.117 444 236 3 37 480 14 436 9.26e-114 343
Msa0277520 AT1G54730.10 55.124 283 126 1 54 336 37 318 9.15e-109 326
Msa0277520 AT1G54730.6 55.124 283 126 1 54 336 37 318 9.15e-109 326
Msa0277520 AT1G08900.4 42.537 402 230 1 49 450 25 425 6.25e-108 328
Msa0277520 AT5G27360.2 45.205 365 199 1 119 483 1 364 2.64e-107 324
Msa0277520 AT5G27360.5 45.205 365 199 1 119 483 1 364 2.64e-107 324
Msa0277520 AT5G27360.4 41.895 401 215 2 49 449 35 417 1.55e-102 314
Msa0277520 AT3G05155.2 43.598 328 170 3 36 352 3 326 1.71e-88 274
Msa0277520 AT5G16150.2 31.277 470 306 6 26 485 82 544 7.01e-59 203
Msa0277520 AT5G16150.1 31.277 470 306 6 26 485 82 544 7.01e-59 203
Msa0277520 AT5G16150.3 31.277 470 306 6 26 485 82 544 7.01e-59 203
Msa0277520 AT3G03090.1 29.283 502 308 12 9 481 17 500 9.17e-56 194
Msa0277520 AT5G17010.1 28.180 511 318 12 4 481 6 500 3.09e-54 190
Msa0277520 AT5G17010.3 28.180 511 318 12 4 481 6 500 3.09e-54 190
Msa0277520 AT5G17010.4 28.180 511 318 12 4 481 6 500 3.09e-54 190
Msa0277520 AT2G43330.1 33.504 391 233 10 109 480 94 476 6.06e-53 186
Msa0277520 AT5G59250.1 29.545 484 304 11 30 483 80 556 3.48e-50 180
Msa0277520 AT2G16130.1 29.909 438 278 7 77 485 54 491 1.25e-49 177
Msa0277520 AT2G20780.1 31.042 451 284 9 49 480 55 497 1.57e-49 177
Msa0277520 AT2G16120.1 28.976 459 289 7 60 485 37 491 3.24e-49 176
Msa0277520 AT2G20780.2 30.824 425 261 9 78 480 26 439 4.78e-49 175
Msa0277520 AT3G18830.1 27.500 440 283 8 77 484 64 499 3.49e-48 174
Msa0277520 AT4G36670.1 29.825 456 290 9 55 481 23 477 4.59e-46 167
Msa0277520 AT1G05030.2 30.073 409 256 7 93 485 73 467 1.85e-44 162
Msa0277520 AT1G05030.1 29.556 450 283 9 55 485 85 519 1.86e-44 164
Msa0277520 AT1G67300.2 29.263 475 287 11 33 480 35 487 1.22e-43 161
Msa0277520 AT2G18480.1 26.503 449 295 7 63 480 36 480 9.19e-43 159
Msa0277520 AT1G67300.1 29.263 475 286 12 33 480 35 486 4.91e-42 156
Msa0277520 AT1G67300.3 29.263 475 286 12 33 480 35 486 4.91e-42 156
Msa0277520 AT1G79820.2 29.979 467 285 12 36 480 41 487 7.30e-39 147
Msa0277520 AT1G79820.1 29.979 467 285 12 36 480 41 487 7.30e-39 147
Msa0277520 AT3G05960.1 27.791 421 260 9 89 483 80 482 9.09e-36 139
Msa0277520 AT5G26340.1 28.186 408 269 9 89 479 84 484 1.22e-35 139
Msa0277520 AT4G21480.1 27.981 411 272 8 87 480 81 484 2.83e-35 138
Msa0277520 AT1G67300.6 28.842 423 252 11 33 429 35 434 7.68e-35 135
Msa0277520 AT1G67300.7 28.842 423 252 11 33 429 35 434 7.68e-35 135
Msa0277520 AT5G26250.1 26.988 415 271 9 89 483 81 483 1.65e-34 135
Msa0277520 AT1G11260.1 27.073 410 273 9 89 479 83 485 2.03e-34 135
Msa0277520 AT1G67300.4 29.056 413 244 11 33 419 35 424 6.87e-34 132
Msa0277520 AT1G67300.5 29.056 413 244 11 33 419 35 424 6.87e-34 132
Msa0277520 AT1G79820.4 29.782 413 253 10 36 429 41 435 8.77e-34 133
Msa0277520 AT5G23270.1 26.585 410 274 8 89 479 85 486 2.11e-32 130
Msa0277520 AT3G19940.1 25.672 409 278 9 89 479 85 485 4.92e-32 129
Msa0277520 AT1G07340.1 27.228 404 277 8 89 479 82 481 1.33e-31 127
Msa0277520 AT5G17010.2 24.096 498 273 12 21 481 8 437 4.79e-31 125
Msa0277520 AT1G77210.2 27.941 408 269 10 89 479 86 485 7.61e-31 125
Msa0277520 AT1G77210.1 27.941 408 269 10 89 479 86 485 7.61e-31 125
Msa0277520 AT1G30220.1 31.765 340 208 11 49 368 28 363 1.97e-30 125
Msa0277520 AT1G30220.1 35.922 103 57 2 383 480 455 553 1.43e-11 67.0
Msa0277520 AT3G19930.1 26.291 426 291 9 70 480 67 484 2.61e-30 124
Msa0277520 AT3G19930.2 26.291 426 291 9 70 480 67 484 2.61e-30 124
Msa0277520 AT1G50310.1 25.610 410 278 10 89 479 85 486 4.12e-30 123
Msa0277520 AT4G02050.2 27.920 351 229 9 145 479 142 484 4.21e-29 120
Msa0277520 AT4G02050.1 27.920 351 229 9 145 479 142 484 4.21e-29 120
Msa0277520 AT5G61520.2 27.222 360 226 9 142 479 94 439 3.47e-27 114
Msa0277520 AT5G61520.1 27.222 360 226 9 142 479 142 487 4.09e-27 114
Msa0277520 AT1G34580.2 25.845 414 275 11 89 479 33 437 1.93e-25 108
Msa0277520 AT1G34580.1 25.845 414 275 11 89 479 83 487 2.37e-25 109
Msa0277520 AT1G79820.3 27.505 469 246 14 36 480 41 439 2.02e-24 105
Msa0277520 AT2G35740.1 26.962 293 196 6 93 369 73 363 2.18e-24 107
Msa0277520 AT2G35740.1 37.374 99 61 1 383 480 458 556 1.63e-13 73.2
Msa0277520 AT1G50310.2 25.444 338 225 10 161 479 14 343 6.02e-24 103
Msa0277520 AT4G16480.2 29.562 274 169 9 109 363 90 358 7.88e-24 105
Msa0277520 AT4G16480.2 35.354 99 63 1 383 480 459 557 7.35e-13 71.2
Msa0277520 AT4G16480.3 29.562 274 169 9 109 363 90 358 7.88e-24 105
Msa0277520 AT4G16480.3 35.354 99 63 1 383 480 459 557 7.35e-13 71.2
Msa0277520 AT4G16480.1 29.562 274 169 9 109 363 90 358 7.88e-24 105
Msa0277520 AT4G16480.1 35.354 99 63 1 383 480 459 557 7.35e-13 71.2
Msa0277520 AT1G77210.3 28.363 342 210 11 160 479 8 336 2.79e-23 101
Msa0277520 AT3G51490.1 35.714 168 94 4 97 254 54 217 9.26e-19 90.1
Msa0277520 AT3G51490.1 27.523 218 134 5 275 479 502 708 7.61e-13 71.2
Msa0277520 AT3G51490.2 35.714 168 94 4 97 254 54 217 9.59e-19 90.1
Msa0277520 AT3G51490.2 28.899 218 139 5 275 479 502 716 1.24e-15 80.1
Msa0277520 AT3G51490.3 35.714 168 94 4 97 254 4 167 1.12e-18 89.7
Msa0277520 AT3G51490.3 28.899 218 139 5 275 479 452 666 1.21e-15 80.1
Msa0277520 AT1G20840.2 28.636 220 149 3 51 263 6 224 1.50e-18 89.4
Msa0277520 AT1G20840.2 26.728 217 143 3 276 479 502 715 4.83e-14 75.1
Msa0277520 AT1G20840.1 28.636 220 149 3 51 263 6 224 1.50e-18 89.4
Msa0277520 AT1G20840.1 26.728 217 143 3 276 479 502 715 4.83e-14 75.1
Msa0277520 AT4G35300.9 34.536 194 103 6 77 254 32 217 2.48e-18 88.6
Msa0277520 AT4G35300.9 29.358 218 138 4 275 479 498 712 3.35e-15 79.0
Msa0277520 AT4G35300.2 34.536 194 103 6 77 254 32 217 2.48e-18 88.6
Msa0277520 AT4G35300.2 29.358 218 138 4 275 479 498 712 3.35e-15 79.0
Msa0277520 AT4G35300.3 34.536 194 103 6 77 254 32 217 2.48e-18 88.6
Msa0277520 AT4G35300.3 29.358 218 138 4 275 479 498 712 3.35e-15 79.0
Msa0277520 AT4G35300.4 34.536 194 103 6 77 254 32 217 2.77e-18 88.6
Msa0277520 AT4G35300.4 29.358 218 138 4 275 479 508 722 3.79e-15 78.6
Msa0277520 AT4G35300.8 34.536 194 103 6 77 254 32 217 2.77e-18 88.6
Msa0277520 AT4G35300.8 29.358 218 138 4 275 479 508 722 3.79e-15 78.6
Msa0277520 AT4G35300.6 34.536 194 103 6 77 254 32 217 2.77e-18 88.6
Msa0277520 AT4G35300.6 29.358 218 138 4 275 479 508 722 3.79e-15 78.6
Msa0277520 AT4G35300.11 34.536 194 103 6 77 254 32 217 2.77e-18 88.6
Msa0277520 AT4G35300.11 29.358 218 138 4 275 479 508 722 3.79e-15 78.6
Msa0277520 AT4G35300.1 34.536 194 103 6 77 254 32 217 2.77e-18 88.6
Msa0277520 AT4G35300.1 29.358 218 138 4 275 479 508 722 3.79e-15 78.6
Msa0277520 AT4G35300.10 34.536 194 103 6 77 254 32 217 2.77e-18 88.6
Msa0277520 AT4G35300.10 29.358 218 138 4 275 479 508 722 3.79e-15 78.6
Msa0277520 AT4G35300.7 34.536 194 103 6 77 254 32 217 2.77e-18 88.6
Msa0277520 AT4G35300.7 29.358 218 138 4 275 479 508 722 3.79e-15 78.6
Msa0277520 AT1G54730.1 54.839 62 28 0 100 161 1 62 9.10e-17 75.1
Msa0277520 AT4G35300.5 29.358 218 138 4 275 479 311 525 2.49e-15 79.0
Msa0277520 AT1G79820.5 25.485 361 183 13 144 485 89 382 8.74e-15 76.3

Find 109 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACAATCTGTTGGAATTAA+TGG 0.124064 2_3:-10099178 Msa0277520:CDS
TTGCAGCTTATGATTGTTAT+TGG 0.148748 2_3:-10100114 Msa0277520:intron
CATTAAATATATCAAAATAT+TGG 0.220828 2_3:+10097572 None:intergenic
CAAAACATTGGAAGAAATTC+AGG 0.233434 2_3:-10097686 Msa0277520:CDS
TGCTGGAAGTTTGGTGGTTT+TGG 0.236584 2_3:-10097951 Msa0277520:CDS
TGATAACTAATGCCGATAAT+TGG 0.240590 2_3:+10097512 None:intergenic
TGATGAAGCTAATGAAATTC+TGG 0.251682 2_3:-10099498 Msa0277520:intron
TCAGATTGGAGTTGGATTAA+TGG 0.253920 2_3:-10099206 Msa0277520:intron
TAATAGGAAGTCTCATAAAT+TGG 0.255488 2_3:-10100074 Msa0277520:CDS
AAGAATTTCAACTAGCATTA+AGG 0.257869 2_3:-10099550 Msa0277520:CDS
CATTAGTTATCAAATTCTTT+TGG 0.260068 2_3:-10097501 Msa0277520:three_prime_UTR
GCAGTTCCTTTCACATTTAT+CGG 0.267185 2_3:+10097971 None:intergenic
TCCAGACTTGTCCATCAAAA+TGG 0.279878 2_3:+10098591 None:intergenic
ATGGCTCCCAACATGGTAAA+TGG 0.286883 2_3:+10098610 None:intergenic
CCTTGCATTTGCTTGCTTGT+TGG 0.304574 2_3:-10099915 Msa0277520:CDS
TTTGAACCAAGATGTCATTA+AGG 0.306072 2_3:-10097433 Msa0277520:three_prime_UTR
AGCACATTTGTTGCTGTTTG+TGG 0.330585 2_3:-10103124 Msa0277520:CDS
TCAGATAAAAGTGTGGAAAA+TGG 0.337919 2_3:-10103169 Msa0277520:CDS
TGGATCGGTTATATACATTA+TGG 0.339834 2_3:-10097621 Msa0277520:three_prime_UTR
GCTATTTCTGCTATATATAC+TGG 0.345158 2_3:+10100254 None:intergenic
TTGGGTTGGGATCAGTTCCT+TGG 0.348262 2_3:-10098109 Msa0277520:CDS
CAAAGCATAGATAGAATAAC+AGG 0.349701 2_3:-10097462 Msa0277520:three_prime_UTR
TCTGCAAGTGGAACATTCTT+AGG 0.352381 2_3:-10098456 Msa0277520:CDS
ATTAAATATATCAAAATATT+GGG 0.353502 2_3:+10097573 None:intergenic
GACATTGCTTCTGTCTCTCT+TGG 0.367254 2_3:-10097599 Msa0277520:three_prime_UTR
TAGGTTCCATTTACCATGTT+GGG 0.372499 2_3:-10098616 Msa0277520:CDS
GTAAGTATTACTGTTATAAG+AGG 0.375329 2_3:+10098562 None:intergenic
TTCTTAGGCTGCTTTATAAC+CGG 0.380196 2_3:-10098441 Msa0277520:CDS
CACCCACTCAAGCGGCTATC+AGG 0.386134 2_3:-10102005 Msa0277520:CDS
TGGATCAGAATCAAAGCTTA+TGG 0.390013 2_3:-10098318 Msa0277520:intron
CAGAGCGCACATATTTGCTT+TGG 0.392555 2_3:+10099324 None:intergenic
GCTAGCTGTCTTCTTCTCTA+AGG 0.393869 2_3:-10100865 Msa0277520:intron
TGGGTTGGGATCAGTTCCTT+GGG 0.394114 2_3:-10098108 Msa0277520:CDS
ATTGAGGATGGAGAAACTAA+TGG 0.405911 2_3:-10103253 Msa0277520:CDS
CCTGGACACTGTCCAATTAT+CGG 0.407891 2_3:-10097524 Msa0277520:three_prime_UTR
ATTAGCAGTTGCAGGTGTAT+TGG 0.415758 2_3:-10098278 Msa0277520:intron
CTACAAATAGAATGGTTAAG+AGG 0.421225 2_3:+10097734 None:intergenic
TCATTCCTGAGTCTCCTAGA+TGG 0.424540 2_3:-10099884 Msa0277520:CDS
TTGAGGATGGAGAAACTAAT+GGG 0.428281 2_3:-10103252 Msa0277520:CDS
GAACAATTTCAGATTGGAGT+TGG 0.429941 2_3:-10099214 Msa0277520:intron
GTGCCAACATTAGCAGTTGC+AGG 0.430412 2_3:-10098286 Msa0277520:CDS
GAAAGGAACTGCTGGAAGTT+TGG 0.437546 2_3:-10097960 Msa0277520:CDS
GTGACCATTGGTGCAATGCT+TGG 0.438418 2_3:-10101063 Msa0277520:CDS
CTTATGAGTTGGAGTTCTCC+TGG 0.439978 2_3:-10097884 Msa0277520:intron
ATGGCATTTCAACAATCTGT+TGG 0.440440 2_3:-10099187 Msa0277520:CDS
CTGATATCATTGGCAGGAAA+GGG 0.440631 2_3:-10101017 Msa0277520:CDS
TCCAGGCCTTAATGACATCT+TGG 0.442306 2_3:+10097427 None:intergenic
TCCTTTCCTTGTTGAATGAA+AGG 0.450559 2_3:+10103211 None:intergenic
AGGACTTGCAACAACAAATC+AGG 0.474061 2_3:-10100213 Msa0277520:intron
AAGGATGCTTGTAAAGAAGT+TGG 0.476415 2_3:-10103193 Msa0277520:CDS
AACTAGCATTAAGGAAACTA+CGG 0.476801 2_3:-10099541 Msa0277520:CDS
TTTGGTTCTTTGGTGACCAT+TGG 0.481812 2_3:-10101075 Msa0277520:CDS
ATCAAAGCTTATGGCTTGAG+TGG 0.485093 2_3:-10098309 Msa0277520:CDS
AATGACAATTGAGCAGCATA+AGG 0.485697 2_3:-10103278 Msa0277520:CDS
GAGTTCTTACACACTTGACT+TGG 0.485780 2_3:-10100745 Msa0277520:CDS
GCAAGCAAATGCAAGGAACT+AGG 0.487157 2_3:+10099922 None:intergenic
AGTGTGGAAAATGGATCCAT+TGG 0.491014 2_3:-10103160 Msa0277520:CDS
TATGCTTTGTCTGTCCTGAA+TGG 0.495388 2_3:+10097476 None:intergenic
TGGTAGCGTGGCTAGGAGCT+TGG 0.495651 2_3:-10097931 Msa0277520:CDS
CATAGCTTATGCATGTATAC+AGG 0.497491 2_3:-10098723 Msa0277520:intron
TCCTGAGTCTCCTAGATGGC+TGG 0.502043 2_3:-10099880 Msa0277520:intron
AGCTCCAAGCATTGCACCAA+TGG 0.502584 2_3:+10101059 None:intergenic
CCGATAATTGGACAGTGTCC+AGG 0.503983 2_3:+10097524 None:intergenic
ATAAATGTGAAAGGAACTGC+TGG 0.512457 2_3:-10097968 Msa0277520:CDS
CAAGAACCTTTCATTCAACA+AGG 0.516918 2_3:-10103217 Msa0277520:CDS
TCCTTCCTTACCAGCCATCT+AGG 0.519483 2_3:+10099870 None:intergenic
ATAGGTTCCATTTACCATGT+TGG 0.521078 2_3:-10098617 Msa0277520:intron
ACTAGCATTAAGGAAACTAC+GGG 0.523883 2_3:-10099540 Msa0277520:CDS
TTAAGTAAATTACAACATCC+AGG 0.527916 2_3:+10097410 None:intergenic
GGTCGAGTTACTGATATCAT+TGG 0.527994 2_3:-10101027 Msa0277520:CDS
ACCTTTCATTCAACAAGGAA+AGG 0.530081 2_3:-10103212 Msa0277520:CDS
GGGCTTTCTTCAGCAAAAGC+TGG 0.531999 2_3:-10098749 Msa0277520:CDS
TCTGTTGGAATTAATGGCAT+AGG 0.532395 2_3:-10099172 Msa0277520:CDS
CTTACACACTTGACTTGGGA+AGG 0.536358 2_3:-10100740 Msa0277520:CDS
TGAGCAGCATAAGGATATTG+AGG 0.536915 2_3:-10103269 Msa0277520:CDS
ACCAAGATGTCATTAAGGCC+TGG 0.537644 2_3:-10097428 Msa0277520:three_prime_UTR
TACAAATAGAATGGTTAAGA+GGG 0.541695 2_3:+10097735 None:intergenic
ACTGATATCATTGGCAGGAA+AGG 0.545701 2_3:-10101018 Msa0277520:CDS
ACCAGCCATCTAGGAGACTC+AGG 0.545779 2_3:+10099879 None:intergenic
CAGCATAAGGATATTGAGGA+TGG 0.555700 2_3:-10103265 Msa0277520:CDS
TGGCGACAACTAGCTCTAGC+AGG 0.561924 2_3:-10100054 Msa0277520:intron
CTGTATACATGCATAAGCTA+TGG 0.562149 2_3:+10098724 None:intergenic
CATCAAAATGGCTCCCAACA+TGG 0.563798 2_3:+10098603 None:intergenic
GACCTGATAGCCGCTTGAGT+GGG 0.574441 2_3:+10102003 None:intergenic
ACACCTGCAACTGCTAATGT+TGG 0.582284 2_3:+10098283 None:intergenic
GAGTTACTGATATCATTGGC+AGG 0.583613 2_3:-10101023 Msa0277520:CDS
TGAAACCAAAGGCAAAACAT+TGG 0.583752 2_3:-10097698 Msa0277520:CDS
AGTTCTTACACACTTGACTT+GGG 0.588739 2_3:-10100744 Msa0277520:CDS
AGGAACTGCTGGAAGTTTGG+TGG 0.588904 2_3:-10097957 Msa0277520:CDS
TAATTTCAGGTCTCTGCAAG+TGG 0.589919 2_3:-10098468 Msa0277520:intron
TCCTATGATACAAAATCCTG+TGG 0.593679 2_3:+10100890 None:intergenic
AATTGGAGTTATCTCATATG+TGG 0.595991 2_3:-10100700 Msa0277520:intron
AGACCTGATAGCCGCTTGAG+TGG 0.599979 2_3:+10102002 None:intergenic
ATCAAGCTATAAAGCAGACC+TGG 0.605933 2_3:-10097542 Msa0277520:three_prime_UTR
TCAAAGCTTATGGCTTGAGT+GGG 0.616539 2_3:-10098308 Msa0277520:CDS
CCAACAAGCAAGCAAATGCA+AGG 0.620888 2_3:+10099915 None:intergenic
ACCTCAGACATCATCACCCA+AGG 0.625225 2_3:+10098092 None:intergenic
GTGTTTCCGATAAATGTGAA+AGG 0.633214 2_3:-10097977 Msa0277520:CDS
CAGGCTATGAGAATTTCCAC+AGG 0.633545 2_3:-10100906 Msa0277520:CDS
AGTTGGATCAGATAAAAGTG+TGG 0.634652 2_3:-10103176 Msa0277520:CDS
AAAGTAGTCCCTGAAACCAA+AGG 0.635083 2_3:-10097709 Msa0277520:CDS
TTATTCAGCACCCACTCAAG+CGG 0.639807 2_3:-10102013 Msa0277520:CDS
ATGCTTGGAGCTATAACAAG+TGG 0.646646 2_3:-10101048 Msa0277520:CDS
GCTAAGCAGAACCATTCCAA+TGG 0.646752 2_3:+10103144 None:intergenic
TGATATCATTGGCAGGAAAG+GGG 0.647485 2_3:-10101016 Msa0277520:intron
GGAAAATGGATCCATTGGAA+TGG 0.671020 2_3:-10103155 Msa0277520:CDS
TCTTAATCTATCTCTTGCTG+AGG 0.689216 2_3:-10101977 Msa0277520:intron
TCCTTGGGTGATGATGTCTG+AGG 0.717844 2_3:-10098093 Msa0277520:intron
CTAGCATTAAGGAAACTACG+GGG 0.788030 2_3:-10099539 Msa0277520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGATTTTTGTAAATTATTAT+TGG - chr2_3:10097599-10097618 Msa0277520:three_prime_UTR 10.0%
!! TTATCAATAAGAATTTAAAT+TGG + chr2_3:10098432-10098451 None:intergenic 10.0%
!! ATAATATAATAATGACAATA+AGG + chr2_3:10098739-10098758 None:intergenic 10.0%
!!! TTTTTTTATGCAATAATTTA+AGG + chr2_3:10099421-10099440 None:intergenic 10.0%
!!! TCTAAGAATAAAATTTTAAA+TGG + chr2_3:10099712-10099731 None:intergenic 10.0%
!!! AAAATTAATTTTAACATGTA+TGG - chr2_3:10100075-10100094 Msa0277520:CDS 10.0%
!! TTAGAAATATTATAATAAAG+AGG + chr2_3:10100367-10100386 None:intergenic 10.0%
!!! ATTTAAAACTAATGTTATTA+TGG + chr2_3:10100644-10100663 None:intergenic 10.0%
!! ATCAATTAAAAAAAATACTA+TGG + chr2_3:10101226-10101245 None:intergenic 10.0%
!! ATATATATATATATATGGAT+CGG - chr2_3:10103031-10103050 Msa0277520:intron 10.0%
!! CATTAAATATATCAAAATAT+TGG + chr2_3:10103098-10103117 None:intergenic 10.0%
!! CAACTTAATTACATTTAAAT+TGG - chr2_3:10097920-10097939 Msa0277520:CDS 15.0%
!!! GATTTTGTTTATTTTTCTTT+TGG - chr2_3:10098116-10098135 Msa0277520:CDS 15.0%
!!! AATAGGTTAAACTTTAAAAT+TGG - chr2_3:10099186-10099205 Msa0277520:CDS 15.0%
!!! TATTTCTACATAATATGTTT+TGG - chr2_3:10099550-10099569 Msa0277520:CDS 15.0%
!!! ATTTCTACATAATATGTTTT+GGG - chr2_3:10099551-10099570 Msa0277520:CDS 15.0%
!! TTTAAATGGAAAGAATATTA+AGG + chr2_3:10099698-10099717 None:intergenic 15.0%
!!! TATTTTTATTCAATCATGTT+TGG - chr2_3:10100025-10100044 Msa0277520:intron 15.0%
!!! AATTTGAAATTTTTAGTTCT+AGG - chr2_3:10100135-10100154 Msa0277520:intron 15.0%
!!! AAAATTGATTTTGAATGAAT+TGG + chr2_3:10100267-10100286 None:intergenic 15.0%
!!! CATTATTCTTATTCTTTTAT+AGG + chr2_3:10101037-10101056 None:intergenic 15.0%
!! GACAAAATAATTTAGTTATA+TGG + chr2_3:10102005-10102024 None:intergenic 15.0%
!!! TATTTGTTACATTGAATAAT+AGG - chr2_3:10102032-10102051 Msa0277520:intron 15.0%
!! GAAATTATACAACAATTATT+TGG + chr2_3:10102186-10102205 None:intergenic 15.0%
!! AATAATTGTTGTATAATTTC+AGG - chr2_3:10102186-10102205 Msa0277520:intron 15.0%
!!! TAATAATTGTATTGTTTTTG+TGG - chr2_3:10102878-10102897 Msa0277520:intron 15.0%
!! GAGCAATATATATATATATA+TGG - chr2_3:10103026-10103045 Msa0277520:intron 15.0%
!! ACAACATGATTAAACTTAAA+TGG - chr2_3:10097861-10097880 Msa0277520:intron 20.0%
!!! TTTATTTTTCTTTTGGTGTA+TGG - chr2_3:10098123-10098142 Msa0277520:CDS 20.0%
!! AATATGTCAAAAATAGATGT+AGG + chr2_3:10099094-10099113 None:intergenic 20.0%
!! AGTAAAGTAAGCATTTAAAT+AGG - chr2_3:10099169-10099188 Msa0277520:CDS 20.0%
!! AAAGTACAGAATTTGTAAAT+TGG - chr2_3:10099372-10099391 Msa0277520:CDS 20.0%
!!! TTTCTACATAATATGTTTTG+GGG - chr2_3:10099552-10099571 Msa0277520:CDS 20.0%
!!! TATTCTTAGAAGTAACATTT+TGG - chr2_3:10099722-10099741 Msa0277520:intron 20.0%
!!! TCATCAATGTCATTTTTAAT+AGG - chr2_3:10100577-10100596 Msa0277520:intron 20.0%
!! AAGGATATAACAAATTAAGA+AGG - chr2_3:10100673-10100692 Msa0277520:intron 20.0%
!!! AAATTATGCACAATTTTTTC+AGG - chr2_3:10101076-10101095 Msa0277520:CDS 20.0%
!! GAAATTGTTCTATATAGTTT+AGG + chr2_3:10101443-10101462 None:intergenic 20.0%
!! TATATAGAACAATTTCAGAT+TGG - chr2_3:10101447-10101466 Msa0277520:intron 20.0%
!! ACAAATTTGTCTTTCTTAAA+TGG + chr2_3:10101724-10101743 None:intergenic 20.0%
!!! TTATTATGTTACGACTTTTT+CGG + chr2_3:10101771-10101790 None:intergenic 20.0%
!! AAAAGTCGTAACATAATAAA+AGG - chr2_3:10101772-10101791 Msa0277520:intron 20.0%
!! AAAGTCGTAACATAATAAAA+GGG - chr2_3:10101773-10101792 Msa0277520:intron 20.0%
!!! AGAAAATATGAGATATTTTC+AGG + chr2_3:10102504-10102523 None:intergenic 20.0%
!!! CATTAGTTATCAAATTCTTT+TGG - chr2_3:10103166-10103185 Msa0277520:CDS 20.0%
!! CGATTAAAAACAAGTCATTT+TGG + chr2_3:10097773-10097792 None:intergenic 25.0%
!!! ACTAGGCTGTAAATATTTTT+TGG + chr2_3:10098023-10098042 None:intergenic 25.0%
! CTGTTACAACAGATAAAATA+AGG + chr2_3:10098231-10098250 None:intergenic 25.0%
!! TTATTGATAAAGTGTTCGTA+AGG - chr2_3:10098442-10098461 Msa0277520:CDS 25.0%
!! TCATCATATTTGTTGATAAG+TGG - chr2_3:10098808-10098827 Msa0277520:intron 25.0%
!! CATCATATTTGTTGATAAGT+GGG - chr2_3:10098809-10098828 Msa0277520:intron 25.0%
! AATAACATGTAATGTAGGTT+AGG + chr2_3:10098927-10098946 None:intergenic 25.0%
! CTTTCAATAACATGTAATGT+AGG + chr2_3:10098932-10098951 None:intergenic 25.0%
! AAAAAAAAGTCTAGCTACAT+GGG + chr2_3:10099259-10099278 None:intergenic 25.0%
! TAAAAAAAAGTCTAGCTACA+TGG + chr2_3:10099260-10099279 None:intergenic 25.0%
!! GTTAGAGAGTACAAAATTTA+TGG + chr2_3:10099399-10099418 None:intergenic 25.0%
! TGGATAATTATATGAGAAAC+AGG - chr2_3:10099742-10099761 Msa0277520:intron 25.0%
!! TTTTATTCAATCATGTTTGG+AGG - chr2_3:10100028-10100047 Msa0277520:intron 25.0%
! TGATTTGAAAGGTAAATTCA+AGG + chr2_3:10100173-10100192 None:intergenic 25.0%
! TAAGTGTATTGAATGTAAGA+TGG + chr2_3:10100221-10100240 None:intergenic 25.0%
! TCTAACAAAAATCAGCATAA+CGG - chr2_3:10100382-10100401 Msa0277520:intron 25.0%
! CTTCTTAAGTATCATTGAAT+TGG - chr2_3:10100506-10100525 Msa0277520:intron 25.0%
! TAATAGGAAGTCTCATAAAT+TGG - chr2_3:10100593-10100612 Msa0277520:intron 25.0%
!!! AGTTTTAAATTTTTGCTCGA+AGG - chr2_3:10100654-10100673 Msa0277520:intron 25.0%
! TAGTTTATATGCGAAAAGTT+TGG - chr2_3:10100897-10100916 Msa0277520:CDS 25.0%
! AAGAATTTCAACTAGCATTA+AGG - chr2_3:10101117-10101136 Msa0277520:intron 25.0%
!! AAATCCAAAAACTTAGTCTT+AGG + chr2_3:10101320-10101339 None:intergenic 25.0%
! AATCTGTTTGATTACTCTAA+AGG - chr2_3:10101415-10101434 Msa0277520:intron 25.0%
! ATCTGTTTGATTACTCTAAA+GGG - chr2_3:10101416-10101435 Msa0277520:intron 25.0%
!!! TTCTTTTAATTTTCCACAAC+CGG + chr2_3:10101574-10101593 None:intergenic 25.0%
! AATTCCAATAGTTTAGTCAA+TGG + chr2_3:10101636-10101655 None:intergenic 25.0%
!! AACATAATAAAAGGGTACAT+TGG - chr2_3:10101781-10101800 Msa0277520:intron 25.0%
! TTTATACAAAGATGTCCTAT+AGG - chr2_3:10101843-10101862 Msa0277520:intron 25.0%
! TTTCCTGAGAAATGATTAAA+GGG + chr2_3:10101978-10101997 None:intergenic 25.0%
! GTAAGTATTACTGTTATAAG+AGG + chr2_3:10102108-10102127 None:intergenic 25.0%
! CTCATCTTTATGATTTCAAA+TGG - chr2_3:10102329-10102348 Msa0277520:intron 25.0%
!! AGCTAAACCATTACAATTTT+TGG + chr2_3:10102624-10102643 None:intergenic 25.0%
!!! AAAAGTACTTTTCTTATTGC+AGG - chr2_3:10102668-10102687 Msa0277520:intron 25.0%
!! CTTTCAATTTTCTTATGAGT+TGG - chr2_3:10102772-10102791 Msa0277520:intron 25.0%
! TACAAATAGAATGGTTAAGA+GGG + chr2_3:10102935-10102954 None:intergenic 25.0%
!! TACTTTTGCTACAAATAGAA+TGG + chr2_3:10102944-10102963 None:intergenic 25.0%
! TTAAGTAAATTACAACATCC+AGG + chr2_3:10103260-10103279 None:intergenic 25.0%
! TCAGATAAAAGTGTGGAAAA+TGG - chr2_3:10097498-10097517 Msa0277520:three_prime_UTR 30.0%
!! GTTTGTGGTTCTTTTTCATT+TGG - chr2_3:10097558-10097577 Msa0277520:three_prime_UTR 30.0%
! ATCCTTCGATTTTCACATAA+AGG - chr2_3:10097665-10097684 Msa0277520:exon 30.0%
AAACATTTCAACCATGTGAT+TGG + chr2_3:10097817-10097836 None:intergenic 30.0%
AATTGGATAAGTGTTTGCAA+TGG - chr2_3:10097937-10097956 Msa0277520:CDS 30.0%
ATTGGATAAGTGTTTGCAAT+GGG - chr2_3:10097938-10097957 Msa0277520:CDS 30.0%
!!! AGGCTGTAAATATTTTTTGG+AGG + chr2_3:10098020-10098039 None:intergenic 30.0%
ATAGGAACTGATATGTTAGT+GGG + chr2_3:10098050-10098069 None:intergenic 30.0%
!!! ATACAATGTGTTTTGGAAAG+GGG + chr2_3:10098325-10098344 None:intergenic 30.0%
!!! CATACAATGTGTTTTGGAAA+GGG + chr2_3:10098326-10098345 None:intergenic 30.0%
!!! TCATACAATGTGTTTTGGAA+AGG + chr2_3:10098327-10098346 None:intergenic 30.0%
! CTCATTCATACAATGTGTTT+TGG + chr2_3:10098332-10098351 None:intergenic 30.0%
! CTAGTTTCTATTTTGTGATC+AGG - chr2_3:10098627-10098646 Msa0277520:intron 30.0%
! TTTCTATTTTGTGATCAGGT+GGG - chr2_3:10098631-10098650 Msa0277520:intron 30.0%
ATGAGTGTATCAAGAAGAAT+AGG - chr2_3:10098875-10098894 Msa0277520:intron 30.0%
AATACGTGTCATAGATTCAT+AGG + chr2_3:10099212-10099231 None:intergenic 30.0%
ATGAATCTATGACACGTATT+AGG - chr2_3:10099212-10099231 Msa0277520:intron 30.0%
TGTATATCACTATCCATTAC+CGG - chr2_3:10099346-10099365 Msa0277520:CDS 30.0%
!!! ACATAATATGTTTTGGGGAT+TGG - chr2_3:10099557-10099576 Msa0277520:CDS 30.0%
!!! GTTTTCAATGTTTGGTTCTT+TGG - chr2_3:10099582-10099601 Msa0277520:intron 30.0%
! TTTTTCACAGGATATGGAAT+TGG - chr2_3:10099950-10099969 Msa0277520:intron 30.0%
AATTGGAGTTATCTCATATG+TGG - chr2_3:10099967-10099986 Msa0277520:intron 30.0%
CATTCATCAAGTGATTTGAA+AGG + chr2_3:10100184-10100203 None:intergenic 30.0%
! TGGTTCTCTGAAAATGATTA+TGG + chr2_3:10100247-10100266 None:intergenic 30.0%
CAATCAGTATGTGTTTAGTT+TGG + chr2_3:10100303-10100322 None:intergenic 30.0%
!! GCTATTTCTGCTATATATAC+TGG + chr2_3:10100416-10100435 None:intergenic 30.0%
ATAGCACCAAAAAATCTTAG+AGG - chr2_3:10100431-10100450 Msa0277520:intron 30.0%
TTGCAGCTTATGATTGTTAT+TGG - chr2_3:10100553-10100572 Msa0277520:intron 30.0%
!! ACTCTTGATTTGATTTTGCT+TGG - chr2_3:10100706-10100725 Msa0277520:CDS 30.0%
AACTAGCATTAAGGAAACTA+CGG - chr2_3:10101126-10101145 Msa0277520:intron 30.0%
TGATGAAGCTAATGAAATTC+TGG - chr2_3:10101169-10101188 Msa0277520:intron 30.0%
CTTGATCAGTTAAGAAAGTT+TGG + chr2_3:10101201-10101220 None:intergenic 30.0%
AGCAAAATTGAGTTCAGATA+GGG + chr2_3:10101265-10101284 None:intergenic 30.0%
AAGCAAAATTGAGTTCAGAT+AGG + chr2_3:10101266-10101285 None:intergenic 30.0%
! CTGAACTCAATTTTGCTTAT+AGG - chr2_3:10101268-10101287 Msa0277520:intron 30.0%
CAACAATCTGTTGGAATTAA+TGG - chr2_3:10101489-10101508 Msa0277520:intron 30.0%
AAAACAGTACCAATTATCCA+CGG + chr2_3:10101692-10101711 None:intergenic 30.0%
!! TCCTTTATAACTTGATTTGC+AGG - chr2_3:10101897-10101916 Msa0277520:intron 30.0%
!! CCTTTATAACTTGATTTGCA+GGG - chr2_3:10101898-10101917 Msa0277520:intron 30.0%
GTTTCCTGAGAAATGATTAA+AGG + chr2_3:10101979-10101998 None:intergenic 30.0%
! TACATAGCAGCATTTTCAAT+TGG - chr2_3:10102539-10102558 Msa0277520:intron 30.0%
! ACATAGCAGCATTTTCAATT+GGG - chr2_3:10102540-10102559 Msa0277520:intron 30.0%
CACAACACCAAAAATTGTAA+TGG - chr2_3:10102614-10102633 Msa0277520:intron 30.0%
TGATTATGTGCTTAATTACC+AGG + chr2_3:10102804-10102823 None:intergenic 30.0%
!!! ATTGTATTGTTTTTGTGGAC+AGG - chr2_3:10102883-10102902 Msa0277520:intron 30.0%
CTACAAATAGAATGGTTAAG+AGG + chr2_3:10102936-10102955 None:intergenic 30.0%
CAAAACATTGGAAGAAATTC+AGG - chr2_3:10102981-10103000 Msa0277520:intron 30.0%
TGGATCGGTTATATACATTA+TGG - chr2_3:10103046-10103065 Msa0277520:intron 30.0%
TGATAACTAATGCCGATAAT+TGG + chr2_3:10103158-10103177 None:intergenic 30.0%
! AAATTCTTTTGGATCCATTC+AGG - chr2_3:10103177-10103196 Msa0277520:CDS 30.0%
CAAAGCATAGATAGAATAAC+AGG - chr2_3:10103205-10103224 Msa0277520:CDS 30.0%
TTTGAACCAAGATGTCATTA+AGG - chr2_3:10103234-10103253 Msa0277520:CDS 30.0%
ATTGAGGATGGAGAAACTAA+TGG - chr2_3:10097414-10097433 Msa0277520:three_prime_UTR 35.0%
TTGAGGATGGAGAAACTAAT+GGG - chr2_3:10097415-10097434 Msa0277520:three_prime_UTR 35.0%
CAAGAACCTTTCATTCAACA+AGG - chr2_3:10097450-10097469 Msa0277520:three_prime_UTR 35.0%
ACCTTTCATTCAACAAGGAA+AGG - chr2_3:10097455-10097474 Msa0277520:three_prime_UTR 35.0%
TCCTTTCCTTGTTGAATGAA+AGG + chr2_3:10097459-10097478 None:intergenic 35.0%
AAGGATGCTTGTAAAGAAGT+TGG - chr2_3:10097474-10097493 Msa0277520:three_prime_UTR 35.0%
AGTTGGATCAGATAAAAGTG+TGG - chr2_3:10097491-10097510 Msa0277520:three_prime_UTR 35.0%
GTCCTTTATGTGAAAATCGA+AGG + chr2_3:10097670-10097689 None:intergenic 35.0%
! GACTTTGATAACCTAGAGTT+CGG - chr2_3:10097687-10097706 Msa0277520:CDS 35.0%
TTATCATCTTACCGAACTCT+AGG + chr2_3:10097701-10097720 None:intergenic 35.0%
TAGGAACTGATATGTTAGTG+GGG + chr2_3:10098049-10098068 None:intergenic 35.0%
CATAGGAACTGATATGTTAG+TGG + chr2_3:10098051-10098070 None:intergenic 35.0%
!!! TGTTGCTGTTTCGGTATTTT+GGG - chr2_3:10098090-10098109 Msa0277520:intron 35.0%
!! TCTTTTGGTGTATGGCTTTT+TGG - chr2_3:10098131-10098150 Msa0277520:CDS 35.0%
AAAGGACACAGCAGAAAAAA+AGG + chr2_3:10098175-10098194 None:intergenic 35.0%
TACTATACCAAAGCAAACAG+CGG + chr2_3:10098199-10098218 None:intergenic 35.0%
TTTGCTTTGGTATAGTAGGT+TGG - chr2_3:10098202-10098221 Msa0277520:intron 35.0%
TTGCTTTGGTATAGTAGGTT+GGG - chr2_3:10098203-10098222 Msa0277520:intron 35.0%
! AATGAGCCTCATTTTACTTC+CGG - chr2_3:10098346-10098365 Msa0277520:intron 35.0%
AAACTAACACATGCAAACCA+GGG + chr2_3:10098400-10098419 None:intergenic 35.0%
TAAACTAACACATGCAAACC+AGG + chr2_3:10098401-10098420 None:intergenic 35.0%
! GTTTCTATTTTGTGATCAGG+TGG - chr2_3:10098630-10098649 Msa0277520:intron 35.0%
TCTTAATCTATCTCTTGCTG+AGG - chr2_3:10098690-10098709 Msa0277520:intron 35.0%
GTATATCACTATCCATTACC+GGG - chr2_3:10099347-10099366 Msa0277520:CDS 35.0%
TATATCACTATCCATTACCG+GGG - chr2_3:10099348-10099367 Msa0277520:CDS 35.0%
ACAAATTCTGTACTTTACCC+CGG + chr2_3:10099368-10099387 None:intergenic 35.0%
! GATTGGCAGTTTTCAATGTT+TGG - chr2_3:10099574-10099593 Msa0277520:intron 35.0%
! TCCACAGGATTTTGTATCAT+AGG - chr2_3:10099776-10099795 Msa0277520:intron 35.0%
TCCTATGATACAAAATCCTG+TGG + chr2_3:10099780-10099799 None:intergenic 35.0%
! CAGGATTTTGTATCATAGGA+TGG - chr2_3:10099780-10099799 Msa0277520:intron 35.0%
AGTTCTTACACACTTGACTT+GGG - chr2_3:10099923-10099942 Msa0277520:CDS 35.0%
!! TGCATGCAGTGTTACTTAAT+TGG - chr2_3:10100321-10100340 Msa0277520:intron 35.0%
!! AAAAATCAGCATAACGGATC+AGG - chr2_3:10100388-10100407 Msa0277520:intron 35.0%
!!! AGTCCTCCTCTAAGATTTTT+TGG + chr2_3:10100440-10100459 None:intergenic 35.0%
!! TTGATTTGATTTTGCTTGGC+TGG - chr2_3:10100710-10100729 Msa0277520:CDS 35.0%
!!! TGCACAATTTTTTCAGGCAA+AGG - chr2_3:10101082-10101101 Msa0277520:CDS 35.0%
!!! CAATTTTTTCAGGCAAAGGT+TGG - chr2_3:10101086-10101105 Msa0277520:CDS 35.0%
ACTAGCATTAAGGAAACTAC+GGG - chr2_3:10101127-10101146 Msa0277520:intron 35.0%
!! CCAAAAACTTAGTCTTAGGA+AGG + chr2_3:10101316-10101335 None:intergenic 35.0%
! CCTTCCTAAGACTAAGTTTT+TGG - chr2_3:10101313-10101332 Msa0277520:intron 35.0%
GAACAATTTCAGATTGGAGT+TGG - chr2_3:10101453-10101472 Msa0277520:intron 35.0%
TCAGATTGGAGTTGGATTAA+TGG - chr2_3:10101461-10101480 Msa0277520:intron 35.0%
ATGGCATTTCAACAATCTGT+TGG - chr2_3:10101480-10101499 Msa0277520:intron 35.0%
TCTGTTGGAATTAATGGCAT+AGG - chr2_3:10101495-10101514 Msa0277520:intron 35.0%
AAGTGAGATGAAATACATGC+CGG - chr2_3:10101552-10101571 Msa0277520:intron 35.0%
! GACTCCATTGACTAAACTAT+TGG - chr2_3:10101629-10101648 Msa0277520:intron 35.0%
TTGTAGTAGTATGAAATCCG+TGG - chr2_3:10101672-10101691 Msa0277520:intron 35.0%
GTATGAAATCCGTGGATAAT+TGG - chr2_3:10101680-10101699 Msa0277520:intron 35.0%
TACAAAGATGTCCTATAGGT+AGG - chr2_3:10101847-10101866 Msa0277520:intron 35.0%
ACAAAGATGTCCTATAGGTA+GGG - chr2_3:10101848-10101867 Msa0277520:intron 35.0%
CCCTGCAAATCAAGTTATAA+AGG + chr2_3:10101901-10101920 None:intergenic 35.0%
CTGTATACATGCATAAGCTA+TGG + chr2_3:10101946-10101965 None:intergenic 35.0%
CATAGCTTATGCATGTATAC+AGG - chr2_3:10101944-10101963 Msa0277520:intron 35.0%
GATCCCTTTAATCATTTCTC+AGG - chr2_3:10101972-10101991 Msa0277520:intron 35.0%
ATAGGTTCCATTTACCATGT+TGG - chr2_3:10102050-10102069 Msa0277520:intron 35.0%
TAGGTTCCATTTACCATGTT+GGG - chr2_3:10102051-10102070 Msa0277520:intron 35.0%
GCAAAGGGAATGAGAAATTT+AGG - chr2_3:10102155-10102174 Msa0277520:intron 35.0%
! TTCTTAGGCTGCTTTATAAC+CGG - chr2_3:10102226-10102245 Msa0277520:intron 35.0%
TAGACTTGCCTTGAAAAAGA+AGG + chr2_3:10102257-10102276 None:intergenic 35.0%
TGGATCAGAATCAAAGCTTA+TGG - chr2_3:10102349-10102368 Msa0277520:intron 35.0%
GTGTTTCCGATAAATGTGAA+AGG - chr2_3:10102690-10102709 Msa0277520:intron 35.0%
GCAGTTCCTTTCACATTTAT+CGG + chr2_3:10102699-10102718 None:intergenic 35.0%
ATAAATGTGAAAGGAACTGC+TGG - chr2_3:10102699-10102718 Msa0277520:intron 35.0%
!! GGTACTATGTTTTTGTATGC+TGG - chr2_3:10102904-10102923 Msa0277520:intron 35.0%
!! ATGTTTTGCCTTTGGTTTCA+GGG + chr2_3:10102969-10102988 None:intergenic 35.0%
!! AATGTTTTGCCTTTGGTTTC+AGG + chr2_3:10102970-10102989 None:intergenic 35.0%
TGAAACCAAAGGCAAAACAT+TGG - chr2_3:10102969-10102988 Msa0277520:intron 35.0%
! TTCTTCCAATGTTTTGCCTT+TGG + chr2_3:10102977-10102996 None:intergenic 35.0%
TGAGCAGCATAAGGATATTG+AGG - chr2_3:10097398-10097417 Msa0277520:three_prime_UTR 40.0%
CAGCATAAGGATATTGAGGA+TGG - chr2_3:10097402-10097421 Msa0277520:three_prime_UTR 40.0%
AGTGTGGAAAATGGATCCAT+TGG - chr2_3:10097507-10097526 Msa0277520:three_prime_UTR 40.0%
GGAAAATGGATCCATTGGAA+TGG - chr2_3:10097512-10097531 Msa0277520:three_prime_UTR 40.0%
!! AGCACATTTGTTGCTGTTTG+TGG - chr2_3:10097543-10097562 Msa0277520:three_prime_UTR 40.0%
TTCAACCATGTGATTGGACT+CGG + chr2_3:10097811-10097830 None:intergenic 40.0%
AGGAACTGATATGTTAGTGG+GGG + chr2_3:10098048-10098067 None:intergenic 40.0%
AAAGCATGCTACAACAGCAT+AGG + chr2_3:10098068-10098087 None:intergenic 40.0%
!! ATGCTTTGCTGTTGCTGTTT+CGG - chr2_3:10098081-10098100 Msa0277520:intron 40.0%
!!! CTGTTGCTGTTTCGGTATTT+TGG - chr2_3:10098089-10098108 Msa0277520:intron 40.0%
! TTTGGTTTCTTTCCTGTTGC+TGG - chr2_3:10098149-10098168 Msa0277520:intron 40.0%
GCTGTTTGCTTTGGTATAGT+AGG - chr2_3:10098198-10098217 Msa0277520:intron 40.0%
!! TTTGGTTCTTTGGTGACCAT+TGG - chr2_3:10099592-10099611 Msa0277520:intron 40.0%
ATGCTTGGAGCTATAACAAG+TGG - chr2_3:10099619-10099638 Msa0277520:intron 40.0%
GGTCGAGTTACTGATATCAT+TGG - chr2_3:10099640-10099659 Msa0277520:intron 40.0%
GAGTTACTGATATCATTGGC+AGG - chr2_3:10099644-10099663 Msa0277520:intron 40.0%
ACTGATATCATTGGCAGGAA+AGG - chr2_3:10099649-10099668 Msa0277520:intron 40.0%
CTGATATCATTGGCAGGAAA+GGG - chr2_3:10099650-10099669 Msa0277520:intron 40.0%
TGATATCATTGGCAGGAAAG+GGG - chr2_3:10099651-10099670 Msa0277520:intron 40.0%
GAGTTCTTACACACTTGACT+TGG - chr2_3:10099922-10099941 Msa0277520:CDS 40.0%
! GGAAGGTTTTTCACAGGATA+TGG - chr2_3:10099944-10099963 Msa0277520:intron 40.0%
GCACCAAAAAATCTTAGAGG+AGG - chr2_3:10100434-10100453 Msa0277520:intron 40.0%
AGGACTTGCAACAACAAATC+AGG - chr2_3:10100454-10100473 Msa0277520:intron 40.0%
TTGCAACAACAAATCAGGTG+AGG - chr2_3:10100459-10100478 Msa0277520:intron 40.0%
CTAGCATTAAGGAAACTACG+GGG - chr2_3:10101128-10101147 Msa0277520:intron 40.0%
AGTCAATGGAGTCTACATGA+CGG + chr2_3:10101622-10101641 None:intergenic 40.0%
ATCTCATTGTCCCTACCTAT+AGG + chr2_3:10101861-10101880 None:intergenic 40.0%
TCCAGACTTGTCCATCAAAA+TGG + chr2_3:10102079-10102098 None:intergenic 40.0%
TCAACTACATCTGCATGCAA+AGG - chr2_3:10102139-10102158 Msa0277520:intron 40.0%
CAACTACATCTGCATGCAAA+GGG - chr2_3:10102140-10102159 Msa0277520:intron 40.0%
! TAATTTCAGGTCTCTGCAAG+TGG - chr2_3:10102199-10102218 Msa0277520:intron 40.0%
TCTGCAAGTGGAACATTCTT+AGG - chr2_3:10102211-10102230 Msa0277520:intron 40.0%
CTTGAAAAAGAAGGCAACTC+CGG + chr2_3:10102248-10102267 None:intergenic 40.0%
ATCAAAGCTTATGGCTTGAG+TGG - chr2_3:10102358-10102377 Msa0277520:intron 40.0%
TCAAAGCTTATGGCTTGAGT+GGG - chr2_3:10102359-10102378 Msa0277520:intron 40.0%
AGGAGGAGATTCAAGAATTG+AGG + chr2_3:10102426-10102445 None:intergenic 40.0%
ACTGTATCAACCATGCAAAG+AGG + chr2_3:10102446-10102465 None:intergenic 40.0%
! AGCAGCATTTTCAATTGGGT+TGG - chr2_3:10102544-10102563 Msa0277520:intron 40.0%
! GCAGCATTTTCAATTGGGTT+GGG - chr2_3:10102545-10102564 Msa0277520:intron 40.0%
AAAGTAGTCCCTGAAACCAA+AGG - chr2_3:10102958-10102977 Msa0277520:intron 40.0%
ATCAAGCTATAAAGCAGACC+TGG - chr2_3:10103125-10103144 Msa0277520:CDS 40.0%
TATGCTTTGTCTGTCCTGAA+TGG + chr2_3:10103194-10103213 None:intergenic 40.0%
GCTAAGCAGAACCATTCCAA+TGG + chr2_3:10097526-10097545 None:intergenic 45.0%
GATAAGTGTTTGCAATGGGC+CGG - chr2_3:10097942-10097961 Msa0277520:CDS 45.0%
!! TTTTTGGAGGCCCATACCTT+GGG + chr2_3:10098007-10098026 None:intergenic 45.0%
!!! TTTTTTGGAGGCCCATACCT+TGG + chr2_3:10098008-10098027 None:intergenic 45.0%
!! ATATGTTAGTGGGGGGTACT+AGG + chr2_3:10098040-10098059 None:intergenic 45.0%
GGAACTGATATGTTAGTGGG+GGG + chr2_3:10098047-10098066 None:intergenic 45.0%
!!! TGCTGTTTCGGTATTTTGGG+AGG - chr2_3:10098093-10098112 Msa0277520:intron 45.0%
!! GCTGTTTCGGTATTTTGGGA+GGG - chr2_3:10098094-10098113 Msa0277520:CDS 45.0%
CAGAAAAAAAGGCCAGCAAC+AGG + chr2_3:10098164-10098183 None:intergenic 45.0%
! TTTGCCATTTAGTGCACTCC+TGG - chr2_3:10098251-10098270 Msa0277520:intron 45.0%
! TATTTCAAGTGCCAAGCACC+AGG + chr2_3:10098272-10098291 None:intergenic 45.0%
TTCCAACGAATTTGGAGGCT+CGG + chr2_3:10098374-10098393 None:intergenic 45.0%
AGCCTCCAAATTCGTTGGAA+CGG - chr2_3:10098374-10098393 Msa0277520:intron 45.0%
TTATTCAGCACCCACTCAAG+CGG - chr2_3:10098654-10098673 Msa0277520:intron 45.0%
ATAGGCTAGACAGACTCACA+TGG - chr2_3:10098893-10098912 Msa0277520:intron 45.0%
TCTGTACTTTACCCCGGTAA+TGG + chr2_3:10099362-10099381 None:intergenic 45.0%
CAGGCTATGAGAATTTCCAC+AGG - chr2_3:10099761-10099780 Msa0277520:intron 45.0%
GCTAGCTGTCTTCTTCTCTA+AGG - chr2_3:10099802-10099821 Msa0277520:intron 45.0%
!! CTTACACACTTGACTTGGGA+AGG - chr2_3:10099927-10099946 Msa0277520:intron 45.0%
! GACTTGGGAAGGTTTTTCAC+AGG - chr2_3:10099938-10099957 Msa0277520:intron 45.0%
! TGCTTGGCTGGAACTTTTGA+AGG - chr2_3:10100722-10100741 Msa0277520:CDS 45.0%
GCAAGCAAATGCAAGGAACT+AGG + chr2_3:10100748-10100767 None:intergenic 45.0%
CCAACAAGCAAGCAAATGCA+AGG + chr2_3:10100755-10100774 None:intergenic 45.0%
CCTTGCATTTGCTTGCTTGT+TGG - chr2_3:10100752-10100771 Msa0277520:intron 45.0%
TCATTCCTGAGTCTCCTAGA+TGG - chr2_3:10100783-10100802 Msa0277520:intron 45.0%
CAGAGCGCACATATTTGCTT+TGG + chr2_3:10101346-10101365 None:intergenic 45.0%
! GATGAAATACATGCCGGTTG+TGG - chr2_3:10101558-10101577 Msa0277520:intron 45.0%
ATGGCTCCCAACATGGTAAA+TGG + chr2_3:10102060-10102079 None:intergenic 45.0%
CATCAAAATGGCTCCCAACA+TGG + chr2_3:10102067-10102086 None:intergenic 45.0%
!! CATGTTGGGAGCCATTTTGA+TGG - chr2_3:10102065-10102084 Msa0277520:intron 45.0%
!! GCCATTTTGATGGACAAGTC+TGG - chr2_3:10102075-10102094 Msa0277520:intron 45.0%
!! CGGAGTTGCCTTCTTTTTCA+AGG - chr2_3:10102246-10102265 Msa0277520:intron 45.0%
TGAATCTCCTCCTCTTTGCA+TGG - chr2_3:10102433-10102452 Msa0277520:intron 45.0%
GTATCAACCATGCAAAGAGG+AGG + chr2_3:10102443-10102462 None:intergenic 45.0%
GAAAGGAACTGCTGGAAGTT+TGG - chr2_3:10102707-10102726 Msa0277520:intron 45.0%
!! TGCTGGAAGTTTGGTGGTTT+TGG - chr2_3:10102716-10102735 Msa0277520:intron 45.0%
! CTTATGAGTTGGAGTTCTCC+TGG - chr2_3:10102783-10102802 Msa0277520:intron 45.0%
GACATTGCTTCTGTCTCTCT+TGG - chr2_3:10103068-10103087 Msa0277520:intron 45.0%
CCTGGACACTGTCCAATTAT+CGG - chr2_3:10103143-10103162 Msa0277520:CDS 45.0%
ACCAAGATGTCATTAAGGCC+TGG - chr2_3:10103239-10103258 Msa0277520:CDS 45.0%
TCCAGGCCTTAATGACATCT+TGG + chr2_3:10103243-10103262 None:intergenic 45.0%
!! ATTAAATATATCAAAATATT+GGG + chr2_3:10103097-10103116 None:intergenic 5.0%
AGCATCCGAGTCCAATCACA+TGG - chr2_3:10097803-10097822 Msa0277520:intron 50.0%
!! TTTTGGAGGCCCATACCTTG+GGG + chr2_3:10098006-10098025 None:intergenic 50.0%
TCCTTTGCCGCTGTTTGCTT+TGG - chr2_3:10098189-10098208 Msa0277520:intron 50.0%
ACCAAAGCAAACAGCGGCAA+AGG + chr2_3:10098193-10098212 None:intergenic 50.0%
! AGCACCAGGAGTGCACTAAA+TGG + chr2_3:10098258-10098277 None:intergenic 50.0%
TTTAGTGCACTCCTGGTGCT+TGG - chr2_3:10098258-10098277 Msa0277520:intron 50.0%
!! TCGGTGCCGGAAGTAAAATG+AGG + chr2_3:10098355-10098374 None:intergenic 50.0%
GTGACCATTGGTGCAATGCT+TGG - chr2_3:10099604-10099623 Msa0277520:intron 50.0%
! AGCTCCAAGCATTGCACCAA+TGG + chr2_3:10099611-10099630 None:intergenic 50.0%
AGTCTCCTAGATGGCTGGTA+AGG - chr2_3:10100792-10100811 Msa0277520:intron 50.0%
TCCTAGATGGCTGGTAAGGA+AGG - chr2_3:10100796-10100815 Msa0277520:intron 50.0%
TCCTTCCTTACCAGCCATCT+AGG + chr2_3:10100800-10100819 None:intergenic 50.0%
! GCTGAGACTTTTGTAGCAGC+TGG - chr2_3:10101528-10101547 Msa0277520:intron 50.0%
GGGCTTTCTTCAGCAAAAGC+TGG - chr2_3:10101918-10101937 Msa0277520:intron 50.0%
!! TTGGGTTGGGATCAGTTCCT+TGG - chr2_3:10102558-10102577 Msa0277520:intron 50.0%
! TGGGTTGGGATCAGTTCCTT+GGG - chr2_3:10102559-10102578 Msa0277520:intron 50.0%
! TCCTTGGGTGATGATGTCTG+AGG - chr2_3:10102574-10102593 Msa0277520:intron 50.0%
ACCTCAGACATCATCACCCA+AGG + chr2_3:10102578-10102597 None:intergenic 50.0%
AGGAACTGCTGGAAGTTTGG+TGG - chr2_3:10102710-10102729 Msa0277520:intron 50.0%
!!! GTTTGGTGGTTTTGGTAGCG+TGG - chr2_3:10102724-10102743 Msa0277520:intron 50.0%
CCGATAATTGGACAGTGTCC+AGG + chr2_3:10103146-10103165 None:intergenic 50.0%
CACCGAGCCTCCAAATTCGT+TGG - chr2_3:10098369-10098388 Msa0277520:intron 55.0%
GGCCGTTCCAACGAATTTGG+AGG + chr2_3:10098379-10098398 None:intergenic 55.0%
CAGGGCCGTTCCAACGAATT+TGG + chr2_3:10098382-10098401 None:intergenic 55.0%
CAAATTCGTTGGAACGGCCC+TGG - chr2_3:10098380-10098399 Msa0277520:intron 55.0%
GACCTGATAGCCGCTTGAGT+GGG + chr2_3:10098667-10098686 None:intergenic 55.0%
AGACCTGATAGCCGCTTGAG+TGG + chr2_3:10098668-10098687 None:intergenic 55.0%
!! TGGCGACAACTAGCTCTAGC+AGG - chr2_3:10100613-10100632 Msa0277520:intron 55.0%
TCCTGAGTCTCCTAGATGGC+TGG - chr2_3:10100787-10100806 Msa0277520:intron 55.0%
ACCAGCCATCTAGGAGACTC+AGG + chr2_3:10100791-10100810 None:intergenic 55.0%
!!! GTGGTTTTGGTAGCGTGGCT+AGG - chr2_3:10102729-10102748 Msa0277520:intron 55.0%
TTTGCAATGGGCCGGACCCT+GGG - chr2_3:10097950-10097969 Msa0277520:CDS 60.0%
GCAAGCAGCGCTATAGCACC+AGG - chr2_3:10097977-10097996 Msa0277520:CDS 60.0%
TATAGCACCAGGCCTCCCCA+AGG - chr2_3:10097988-10098007 Msa0277520:intron 60.0%
ACCAGGCCTCCCCAAGGTAT+GGG - chr2_3:10097994-10098013 Msa0277520:intron 60.0%
!! CGAATTTGGAGGCTCGGTGC+CGG + chr2_3:10098368-10098387 None:intergenic 60.0%
CACCCACTCAAGCGGCTATC+AGG - chr2_3:10098662-10098681 Msa0277520:intron 60.0%
! TGGTAGCGTGGCTAGGAGCT+TGG - chr2_3:10102736-10102755 Msa0277520:intron 60.0%
GTTTGCAATGGGCCGGACCC+TGG - chr2_3:10097949-10097968 Msa0277520:CDS 65.0%
TTGCAATGGGCCGGACCCTG+GGG - chr2_3:10097951-10097970 Msa0277520:CDS 65.0%
CACCAGGCCTCCCCAAGGTA+TGG - chr2_3:10097993-10098012 Msa0277520:intron 65.0%
TGGAGGCCCATACCTTGGGG+AGG + chr2_3:10098003-10098022 None:intergenic 65.0%
TGCAATGGGCCGGACCCTGG+GGG - chr2_3:10097952-10097971 Msa0277520:CDS 70.0%
TGCTTGCACCCCCCAGGGTC+CGG + chr2_3:10097964-10097983 None:intergenic 70.0%
AGCGCTGCTTGCACCCCCCA+GGG + chr2_3:10097969-10097988 None:intergenic 70.0%
TAGCGCTGCTTGCACCCCCC+AGG + chr2_3:10097970-10097989 None:intergenic 70.0%
GCCCATACCTTGGGGAGGCC+TGG + chr2_3:10097998-10098017 None:intergenic 70.0%
GCAATGGGCCGGACCCTGGG+GGG - chr2_3:10097953-10097972 Msa0277520:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 10097390 10103299 10097390 ID=Msa0277520;Name=Msa0277520
chr2_3 mRNA 10097390 10103299 10097390 ID=Msa0277520-mRNA-1;Parent=Msa0277520;Name=Msa0277520-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.94|0.83|1|1|1|18|279|485
chr2_3 exon 10097390 10097784 10097390 ID=Msa0277520-mRNA-1:exon:4545;Parent=Msa0277520-mRNA-1
chr2_3 exon 10097885 10097999 10097885 ID=Msa0277520-mRNA-1:exon:4544;Parent=Msa0277520-mRNA-1
chr2_3 exon 10098094 10098153 10098094 ID=Msa0277520-mRNA-1:exon:4543;Parent=Msa0277520-mRNA-1
chr2_3 exon 10098279 10098332 10098279 ID=Msa0277520-mRNA-1:exon:4542;Parent=Msa0277520-mRNA-1
chr2_3 exon 10098422 10098481 10098422 ID=Msa0277520-mRNA-1:exon:4541;Parent=Msa0277520-mRNA-1
chr2_3 exon 10098573 10098635 10098573 ID=Msa0277520-mRNA-1:exon:4540;Parent=Msa0277520-mRNA-1
chr2_3 exon 10098724 10098770 10098724 ID=Msa0277520-mRNA-1:exon:4539;Parent=Msa0277520-mRNA-1
chr2_3 exon 10099140 10099224 10099140 ID=Msa0277520-mRNA-1:exon:4538;Parent=Msa0277520-mRNA-1
chr2_3 exon 10099319 10099399 10099319 ID=Msa0277520-mRNA-1:exon:4537;Parent=Msa0277520-mRNA-1
chr2_3 exon 10099499 10099591 10099499 ID=Msa0277520-mRNA-1:exon:4536;Parent=Msa0277520-mRNA-1
chr2_3 exon 10099881 10099945 10099881 ID=Msa0277520-mRNA-1:exon:4535;Parent=Msa0277520-mRNA-1
chr2_3 exon 10100055 10100130 10100055 ID=Msa0277520-mRNA-1:exon:4534;Parent=Msa0277520-mRNA-1
chr2_3 exon 10100214 10100279 10100214 ID=Msa0277520-mRNA-1:exon:4533;Parent=Msa0277520-mRNA-1
chr2_3 exon 10100701 10100766 10100701 ID=Msa0277520-mRNA-1:exon:4532;Parent=Msa0277520-mRNA-1
chr2_3 exon 10100866 10100925 10100866 ID=Msa0277520-mRNA-1:exon:4531;Parent=Msa0277520-mRNA-1
chr2_3 exon 10101017 10101106 10101017 ID=Msa0277520-mRNA-1:exon:4530;Parent=Msa0277520-mRNA-1
chr2_3 exon 10101978 10102040 10101978 ID=Msa0277520-mRNA-1:exon:4529;Parent=Msa0277520-mRNA-1
chr2_3 exon 10103102 10103299 10103102 ID=Msa0277520-mRNA-1:exon:4528;Parent=Msa0277520-mRNA-1
chr2_3 CDS 10103102 10103299 10103102 ID=Msa0277520-mRNA-1:cds;Parent=Msa0277520-mRNA-1
chr2_3 CDS 10101978 10102040 10101978 ID=Msa0277520-mRNA-1:cds;Parent=Msa0277520-mRNA-1
chr2_3 CDS 10101017 10101106 10101017 ID=Msa0277520-mRNA-1:cds;Parent=Msa0277520-mRNA-1
chr2_3 CDS 10100866 10100925 10100866 ID=Msa0277520-mRNA-1:cds;Parent=Msa0277520-mRNA-1
chr2_3 CDS 10100701 10100766 10100701 ID=Msa0277520-mRNA-1:cds;Parent=Msa0277520-mRNA-1
chr2_3 CDS 10100214 10100279 10100214 ID=Msa0277520-mRNA-1:cds;Parent=Msa0277520-mRNA-1
chr2_3 CDS 10100055 10100130 10100055 ID=Msa0277520-mRNA-1:cds;Parent=Msa0277520-mRNA-1
chr2_3 CDS 10099881 10099945 10099881 ID=Msa0277520-mRNA-1:cds;Parent=Msa0277520-mRNA-1
chr2_3 CDS 10099499 10099591 10099499 ID=Msa0277520-mRNA-1:cds;Parent=Msa0277520-mRNA-1
chr2_3 CDS 10099319 10099399 10099319 ID=Msa0277520-mRNA-1:cds;Parent=Msa0277520-mRNA-1
chr2_3 CDS 10099140 10099224 10099140 ID=Msa0277520-mRNA-1:cds;Parent=Msa0277520-mRNA-1
chr2_3 CDS 10098724 10098770 10098724 ID=Msa0277520-mRNA-1:cds;Parent=Msa0277520-mRNA-1
chr2_3 CDS 10098573 10098635 10098573 ID=Msa0277520-mRNA-1:cds;Parent=Msa0277520-mRNA-1
chr2_3 CDS 10098422 10098481 10098422 ID=Msa0277520-mRNA-1:cds;Parent=Msa0277520-mRNA-1
chr2_3 CDS 10098279 10098332 10098279 ID=Msa0277520-mRNA-1:cds;Parent=Msa0277520-mRNA-1
chr2_3 CDS 10098094 10098153 10098094 ID=Msa0277520-mRNA-1:cds;Parent=Msa0277520-mRNA-1
chr2_3 CDS 10097885 10097999 10097885 ID=Msa0277520-mRNA-1:cds;Parent=Msa0277520-mRNA-1
chr2_3 CDS 10097669 10097784 10097669 ID=Msa0277520-mRNA-1:cds;Parent=Msa0277520-mRNA-1
chr2_3 three_prime_UTR 10097390 10097668 10097390 ID=Msa0277520-mRNA-1:three_prime_utr;Parent=Msa0277520-mRNA-1
Gene Sequence

>Msa0277520

ATGACAATTGAGCAGCATAAGGATATTGAGGATGGAGAAACTAATGGGTTTCAGTATTTGCAAGAACCTTTCATTCAACAAGGAAAGGATGCTTGTAAAGAAGTTGGATCAGATAAAAGTGTGGAAAATGGATCCATTGGAATGGTTCTGCTTAGCACATTTGTTGCTGTTTGTGGTTCTTTTTCATTTGGAACTTGTGTGGGTTATTCAGCACCCACTCAAGCGGCTATCAGGTCTGATCTTAATCTATCTCTTGCTGAGTTTTCAATGTTTGGTTCTTTGGTGACCATTGGTGCAATGCTTGGAGCTATAACAAGTGGTCGAGTTACTGATATCATTGGCAGGAAAGGGGCTATGAGAATTTCCACAGGATTTTGTATCATAGGATGGCTAGCTGTCTTCTTCTCTAAGAGTTCTTACACACTTGACTTGGGAAGGTTTTTCACAGGATATGGAATTGGAGTTATCTCATATGTGGTTCCAGTATATATAGCAGAAATAGCACCAAAAAATCTTAGAGGAGGACTTGCAACAACAAATCAGCTTATGATTGTTATTGGATCATCAATGTCATTTTTAATAGGAAGTCTCATAAATTGGCGACAACTAGCTCTAGCAGGCCTAGTTCCTTGCATTTGCTTGCTTGTTGGTCTGTGCTTCATTCCTGAGTCTCCTAGATGGCTGGCAAAGGTTGGTCGTGAAAAAGAATTTCAACTAGCATTAAGGAAACTACGGGGTAAAGACGTTGATATTTCTGATGAAGCTAATGAAATTCTGGATAATATTGAAACTCTTCAAAGCCTTCCTAAGACTAAGTTTTTGGATTTGTTCCAAAGCAAATATGTGCGCTCTGTAATTATTGGAGTTGGATTAATGGCATTTCAACAATCTGTTGGAATTAATGGCATAGGATTCTATACAGCTGAGACTTTTGTAGCAGCTGGGCTTTCTTCAGCAAAAGCTGGTACCATAGCTTATGCATGTATACAGGTTCCATTTACCATGTTGGGAGCCATTTTGATGGACAAGTCTGGAAGAAAACCTCTTATAACAGTCTCTGCAAGTGGAACATTCTTAGGCTGCTTTATAACCGGAGTTGCCTTCTTTTTCAAGAATCAAAGCTTATGGCTTGAGTGGGTGCCAACATTAGCAGTTGCAGGTGTATTGATCTACATAGCAGCATTTTCAATTGGGTTGGGATCAGTTCCTTGGGTGATGATGTCTGAGGTGTTTCCGATAAATGTGAAAGGAACTGCTGGAAGTTTGGTGGTTTTGGTAGCGTGGCTAGGAGCTTGGATAGTTTCATATACTTTCAATTTTCTTATGAGTTGGAGTTCTCCTGGTACTATGTTTTTGTATGCTGGATGTTCCCTCTTAACCATTCTATTTGTAGCAAAAGTAGTCCCTGAAACCAAAGGCAAAACATTGGAAGAAATTCAGGCTTGCATTAGTTCTTAG
Protein sequence

>Msa0277520

MTIEQHKDIEDGETNGFQYLQEPFIQQGKDACKEVGSDKSVENGSIGMVLLSTFVAVCGSFSFGTCVGYSAPTQAAIRSDLNLSLAEFSMFGSLVTIGAMLGAITSGRVTDIIGRKGAMRISTGFCIIGWLAVFFSKSSYTLDLGRFFTGYGIGVISYVVPVYIAEIAPKNLRGGLATTNQLMIVIGSSMSFLIGSLINWRQLALAGLVPCICLLVGLCFIPESPRWLAKVGREKEFQLALRKLRGKDVDISDEANEILDNIETLQSLPKTKFLDLFQSKYVRSVIIGVGLMAFQQSVGINGIGFYTAETFVAAGLSSAKAGTIAYACIQVPFTMLGAILMDKSGRKPLITVSASGTFLGCFITGVAFFFKNQSLWLEWVPTLAVAGVLIYIAAFSIGLGSVPWVMMSEVFPINVKGTAGSLVVLVAWLGAWIVSYTFNFLMSWSSPGTMFLYAGCSLLTILFVAKVVPETKGKTLEEIQACISS*