Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720870 | XP_003612958.1 | 96.067 | 178 | 7 | 0 | 1 | 178 | 62 | 239 | 3.17e-121 | 352 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720870 | sp|Q38840|AGL17_ARATH | 52.000 | 175 | 74 | 3 | 1 | 174 | 62 | 227 | 3.30e-53 | 172 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720870 | A9YWS1 | 96.067 | 178 | 7 | 0 | 1 | 178 | 62 | 239 | 1.51e-121 | 352 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0720870 | 0.832647 | 8.390120e-56 | -8.615850e-47 |
| Msa0040210 | Msa0720870 | 0.831349 | 1.755802e-55 | -8.615850e-47 |
| Msa0059880 | Msa0720870 | 0.801383 | 9.241270e-49 | -8.615850e-47 |
| Msa0072940 | Msa0720870 | 0.811342 | 7.346726e-51 | -8.615850e-47 |
| Msa0074620 | Msa0720870 | 0.806660 | 7.384086e-50 | -8.615850e-47 |
| Msa0087900 | Msa0720870 | 0.808622 | 2.829436e-50 | -8.615850e-47 |
| Msa0095910 | Msa0720870 | 0.801114 | 1.049083e-48 | -8.615850e-47 |
| Msa0606600 | Msa0720870 | 0.836895 | 7.154711e-57 | -8.615850e-47 |
| Msa0609460 | Msa0720870 | 0.810045 | 1.401152e-50 | -8.615850e-47 |
| Msa0631700 | Msa0720870 | 0.838487 | 2.793745e-57 | -8.615850e-47 |
| Msa0634290 | Msa0720870 | 0.802824 | 4.670824e-49 | -8.615850e-47 |
| Msa0645380 | Msa0720870 | 0.802272 | 6.070160e-49 | -8.615850e-47 |
| Msa0647300 | Msa0720870 | 0.816834 | 4.508888e-52 | -8.615850e-47 |
| Msa0652600 | Msa0720870 | 0.800845 | 1.190271e-48 | -8.615850e-47 |
| Msa0655430 | Msa0720870 | 0.800681 | 1.285815e-48 | -8.615850e-47 |
| Msa0657340 | Msa0720870 | 0.803812 | 2.915596e-49 | -8.615850e-47 |
| Msa0670360 | Msa0720870 | 0.841761 | 3.904556e-58 | -8.615850e-47 |
| Msa0671640 | Msa0720870 | 0.827980 | 1.159277e-54 | -8.615850e-47 |
| Msa0686830 | Msa0720870 | 0.823396 | 1.416413e-53 | -8.615850e-47 |
| Msa0698280 | Msa0720870 | 0.820808 | 5.639849e-53 | -8.615850e-47 |
| Msa0701430 | Msa0720870 | 0.815589 | 8.555734e-52 | -8.615850e-47 |
| Msa0708680 | Msa0720870 | 0.862437 | 5.071928e-64 | -8.615850e-47 |
| Msa0716620 | Msa0720870 | 0.807242 | 5.563062e-50 | -8.615850e-47 |
| Msa0720490 | Msa0720870 | 0.819150 | 1.350516e-52 | -8.615850e-47 |
| Msa0720870 | Msa0727480 | 0.804843 | 1.777733e-49 | -8.615850e-47 |
| Msa0720870 | Msa0731580 | 0.806629 | 7.497656e-50 | -8.615850e-47 |
| Msa0720870 | Msa0751960 | 0.811012 | 8.660593e-51 | -8.615850e-47 |
| Msa0720870 | Msa0757120 | 0.801247 | 9.853578e-49 | -8.615850e-47 |
| Msa0720870 | Msa0761420 | 0.917102 | 7.988804e-86 | -8.615850e-47 |
| Msa0720870 | Msa0761950 | 0.807141 | 5.841606e-50 | -8.615850e-47 |
| Msa0720870 | Msa0768670 | 0.814817 | 1.270123e-51 | -8.615850e-47 |
| Msa0720870 | Msa0789780 | 0.804129 | 2.504787e-49 | -8.615850e-47 |
| Msa0720870 | Msa0799120 | 0.802262 | 6.097389e-49 | -8.615850e-47 |
| Msa0720870 | Msa0803940 | 0.874584 | 6.025613e-68 | -8.615850e-47 |
| Msa0720870 | Msa0806930 | 0.805175 | 1.515083e-49 | -8.615850e-47 |
| Msa0720870 | Msa0809920 | 0.805619 | 1.223234e-49 | -8.615850e-47 |
| Msa0720870 | Msa0814160 | 0.814565 | 1.443934e-51 | -8.615850e-47 |
| Msa0720870 | Msa0816140 | 0.806291 | 8.833422e-50 | -8.615850e-47 |
| Msa0720870 | Msa0822400 | 0.803222 | 3.863537e-49 | -8.615850e-47 |
| Msa0720870 | Msa0822410 | 0.821567 | 3.769024e-53 | -8.615850e-47 |
| Msa0720870 | Msa0824850 | 0.804141 | 2.490733e-49 | -8.615850e-47 |
| Msa0720870 | Msa0826360 | 0.803892 | 2.806546e-49 | -8.615850e-47 |
| Msa0720870 | Msa0841670 | 0.824731 | 6.884519e-54 | -8.615850e-47 |
| Msa0720870 | Msa0841930 | 0.805854 | 1.091677e-49 | -8.615850e-47 |
| Msa0720870 | Msa0842000 | 0.835250 | 1.871464e-56 | -8.615850e-47 |
| Msa0720870 | Msa0863850 | 0.804798 | 1.816817e-49 | -8.615850e-47 |
| Msa0720870 | Msa0863860 | 0.806239 | 9.061463e-50 | -8.615850e-47 |
| Msa0720870 | Msa0893840 | 0.800089 | 1.696926e-48 | -8.615850e-47 |
| Msa0720870 | Msa0896920 | 0.827508 | 1.505255e-54 | -8.615850e-47 |
| Msa0720870 | Msa0898830 | -0.811375 | 7.226592e-51 | -8.615850e-47 |
| Msa0720870 | Msa0935440 | 0.807197 | 5.685111e-50 | -8.615850e-47 |
| Msa0720870 | Msa0940780 | 0.832545 | 8.895329e-56 | -8.615850e-47 |
| Msa0720870 | Msa0944470 | 0.811635 | 6.342546e-51 | -8.615850e-47 |
| Msa0720870 | Msa0946010 | 0.815704 | 8.064845e-52 | -8.615850e-47 |
| Msa0720870 | Msa0975950 | 0.807985 | 3.868255e-50 | -8.615850e-47 |
| Msa0720870 | Msa0976400 | 0.811029 | 8.588252e-51 | -8.615850e-47 |
| Msa0720870 | Msa0996980 | 0.810457 | 1.141572e-50 | -8.615850e-47 |
| Msa0720870 | Msa1003730 | 0.813730 | 2.207436e-51 | -8.615850e-47 |
| Msa0720870 | Msa1003790 | 0.805654 | 1.202754e-49 | -8.615850e-47 |
| Msa0720870 | Msa1003920 | 0.830378 | 3.037664e-55 | -8.615850e-47 |
| Msa0720870 | Msa1006030 | 0.801477 | 8.838950e-49 | -8.615850e-47 |
| Msa0720870 | Msa1006170 | 0.827872 | 1.230312e-54 | -8.615850e-47 |
| Msa0720870 | Msa1022490 | 0.861528 | 9.627487e-64 | -8.615850e-47 |
| Msa0720870 | Msa1022510 | 0.865498 | 5.652831e-65 | -8.615850e-47 |
| Msa0720870 | Msa1030320 | 0.814486 | 1.503726e-51 | -8.615850e-47 |
| Msa0720870 | Msa1035050 | 0.808476 | 3.039062e-50 | -8.615850e-47 |
| Msa0720870 | Msa1041250 | 0.821501 | 3.904218e-53 | -8.615850e-47 |
| Msa0720870 | Msa1048350 | 0.814444 | 1.535928e-51 | -8.615850e-47 |
| Msa0720870 | Msa1061670 | 0.813550 | 2.418422e-51 | -8.615850e-47 |
| Msa0720870 | Msa1062070 | 0.800426 | 1.449639e-48 | -8.615850e-47 |
| Msa0720870 | Msa1063210 | 0.820079 | 8.289010e-53 | -8.615850e-47 |
| Msa0720870 | Msa1064940 | 0.838085 | 3.546483e-57 | -8.615850e-47 |
| Msa0720870 | Msa1068080 | 0.801793 | 7.613591e-49 | -8.615850e-47 |
| Msa0720870 | Msa1069350 | 0.802201 | 6.277206e-49 | -8.615850e-47 |
| Msa0720870 | Msa1075090 | 0.816069 | 6.686840e-52 | -8.615850e-47 |
| Msa0720870 | Msa1079820 | 0.811992 | 5.305417e-51 | -8.615850e-47 |
| Msa0720870 | Msa1082080 | 0.814147 | 1.786613e-51 | -8.615850e-47 |
| Msa0720870 | Msa1087380 | 0.804939 | 1.697859e-49 | -8.615850e-47 |
| Msa0720870 | Msa1100330 | 0.815000 | 1.156865e-51 | -8.615850e-47 |
| Msa0720870 | Msa1106680 | 0.857804 | 1.271908e-62 | -8.615850e-47 |
| Msa0720870 | Msa1106960 | 0.815707 | 8.054933e-52 | -8.615850e-47 |
| Msa0720870 | Msa1107250 | 0.802091 | 6.612091e-49 | -8.615850e-47 |
| Msa0720870 | Msa1108560 | 0.836593 | 8.543523e-57 | -8.615850e-47 |
| Msa0720870 | Msa1115980 | 0.812302 | 4.540071e-51 | -8.615850e-47 |
| Msa0720870 | Msa1120680 | 0.802647 | 5.080957e-49 | -8.615850e-47 |
| Msa0720870 | Msa1123000 | 0.804411 | 2.188180e-49 | -8.615850e-47 |
| Msa0720870 | Msa1136630 | 0.807927 | 3.978741e-50 | -8.615850e-47 |
| Msa0720870 | Msa1138110 | 0.804245 | 2.369906e-49 | -8.615850e-47 |
| Msa0720870 | Msa1142390 | 0.823893 | 1.083617e-53 | -8.615850e-47 |
| Msa0720870 | Msa1147030 | 0.815797 | 7.688810e-52 | -8.615850e-47 |
| Msa0720870 | Msa1148210 | 0.820308 | 7.348057e-53 | -8.615850e-47 |
| Msa0720870 | Msa1150740 | 0.804758 | 1.852221e-49 | -8.615850e-47 |
| Msa0720870 | Msa1150920 | 0.813259 | 2.802627e-51 | -8.615850e-47 |
| Msa0720870 | Msa1152310 | 0.801587 | 8.393333e-49 | -8.615850e-47 |
| Msa0720870 | Msa1153690 | 0.801137 | 1.037701e-48 | -8.615850e-47 |
| Msa0720870 | Msa1156240 | 0.819453 | 1.152278e-52 | -8.615850e-47 |
| Msa0720870 | Msa1157210 | 0.832120 | 1.133084e-55 | -8.615850e-47 |
| Msa0720870 | Msa1162430 | 0.815338 | 9.732003e-52 | -8.615850e-47 |
| Msa0720870 | Msa1162750 | 0.800402 | 1.466064e-48 | -8.615850e-47 |
| Msa0720870 | Msa1164230 | 0.808136 | 3.592007e-50 | -8.615850e-47 |
| Msa0720870 | Msa1165670 | 0.807586 | 4.701034e-50 | -8.615850e-47 |
| Msa0720870 | Msa1167960 | 0.803853 | 2.858856e-49 | -8.615850e-47 |
| Msa0720870 | Msa1169760 | 0.806614 | 7.551406e-50 | -8.615850e-47 |
| Msa0720870 | Msa1170340 | 0.835137 | 1.999435e-56 | -8.615850e-47 |
| Msa0720870 | Msa1174280 | 0.802460 | 5.552661e-49 | -8.615850e-47 |
| Msa0720870 | Msa1179270 | 0.813226 | 2.849098e-51 | -8.615850e-47 |
| Msa0720870 | Msa1181090 | 0.824065 | 9.878471e-54 | -8.615850e-47 |
| Msa0720870 | Msa1186340 | 0.861057 | 1.340465e-63 | -8.615850e-47 |
| Msa0720870 | Msa1186430 | 0.807388 | 5.179730e-50 | -8.615850e-47 |
| Msa0720870 | Msa1191350 | 0.857766 | 1.305256e-62 | -8.615850e-47 |
| Msa0720870 | Msa1202110 | 0.802982 | 4.332807e-49 | -8.615850e-47 |
| Msa0720870 | Msa1211610 | 0.802159 | 6.403458e-49 | -8.615850e-47 |
| Msa0720870 | Msa1225890 | 0.805094 | 1.575417e-49 | -8.615850e-47 |
| Msa0720870 | Msa1226210 | 0.808160 | 3.549350e-50 | -8.615850e-47 |
| Msa0720870 | Msa1238250 | 0.849344 | 3.433980e-60 | -8.615850e-47 |
| Msa0720870 | Msa1240710 | 0.820369 | 7.114766e-53 | -8.615850e-47 |
| Msa0720870 | Msa1245530 | 0.803243 | 3.824905e-49 | -8.615850e-47 |
| Msa0720870 | Msa1254870 | 0.801236 | 9.902021e-49 | -8.615850e-47 |
| Msa0720870 | Msa1267990 | 0.865747 | 4.717963e-65 | -8.615850e-47 |
| Msa0720870 | Msa1269500 | 0.809321 | 2.004409e-50 | -8.615850e-47 |
| Msa0720870 | Msa1281300 | 0.831284 | 1.821843e-55 | -8.615850e-47 |
| Msa0720870 | Msa1319030 | 0.855128 | 7.765216e-62 | -8.615850e-47 |
| Msa0720870 | Msa1319190 | 0.861642 | 8.887730e-64 | -8.615850e-47 |
| Msa0720870 | Msa1321970 | 0.866423 | 2.882338e-65 | -8.615850e-47 |
| Msa0720870 | Msa1322500 | 0.820189 | 7.823341e-53 | -8.615850e-47 |
| Msa0720870 | Msa1340440 | 0.800217 | 1.598292e-48 | -8.615850e-47 |
| Msa0720870 | Msa1355340 | 0.822071 | 2.881712e-53 | -8.615850e-47 |
| Msa0720870 | Msa1357840 | 0.802348 | 5.854055e-49 | -8.615850e-47 |
| Msa0720870 | Msa1366480 | 0.820003 | 8.627052e-53 | -8.615850e-47 |
| Msa0720870 | Msa1368930 | 0.809487 | 1.847296e-50 | -8.615850e-47 |
| Msa0720870 | Msa1384130 | 0.800116 | 1.675678e-48 | -8.615850e-47 |
| Msa0720870 | Msa1411550 | 0.816073 | 6.673393e-52 | -8.615850e-47 |
| Msa0123530 | Msa0720870 | 0.806856 | 6.712225e-50 | -8.615850e-47 |
| Msa0134570 | Msa0720870 | 0.813826 | 2.102765e-51 | -8.615850e-47 |
| Msa0142560 | Msa0720870 | 0.818908 | 1.533246e-52 | -8.615850e-47 |
| Msa0143640 | Msa0720870 | 0.800248 | 1.575735e-48 | -8.615850e-47 |
| Msa0150910 | Msa0720870 | 0.818713 | 1.698054e-52 | -8.615850e-47 |
| Msa0150920 | Msa0720870 | 0.827287 | 1.700702e-54 | -8.615850e-47 |
| Msa0168010 | Msa0720870 | 0.803156 | 3.987210e-49 | -8.615850e-47 |
| Msa0190670 | Msa0720870 | 0.832044 | 1.182888e-55 | -8.615850e-47 |
| Msa0190890 | Msa0720870 | 0.802987 | 4.321268e-49 | -8.615850e-47 |
| Msa0195580 | Msa0720870 | 0.806624 | 7.515849e-50 | -8.615850e-47 |
| Msa0197020 | Msa0720870 | 0.803730 | 3.032663e-49 | -8.615850e-47 |
| Msa0207640 | Msa0720870 | 0.828235 | 1.006437e-54 | -8.615850e-47 |
| Msa0209520 | Msa0720870 | 0.811710 | 6.109325e-51 | -8.615850e-47 |
| Msa0212550 | Msa0720870 | 0.804313 | 2.293551e-49 | -8.615850e-47 |
| Msa0220090 | Msa0720870 | 0.802235 | 6.177682e-49 | -8.615850e-47 |
| Msa0237380 | Msa0720870 | 0.809324 | 2.001486e-50 | -8.615850e-47 |
| Msa0366510 | Msa0720870 | 0.830671 | 2.575545e-55 | -8.615850e-47 |
| Msa0374040 | Msa0720870 | 0.878537 | 2.592395e-69 | -8.615850e-47 |
| Msa0380110 | Msa0720870 | 0.817589 | 3.048661e-52 | -8.615850e-47 |
| Msa0383770 | Msa0720870 | 0.802099 | 6.586777e-49 | -8.615850e-47 |
| Msa0390160 | Msa0720870 | 0.813689 | 2.254333e-51 | -8.615850e-47 |
| Msa0390170 | Msa0720870 | 0.825040 | 5.820266e-54 | -8.615850e-47 |
| Msa0395070 | Msa0720870 | 0.806029 | 1.003037e-49 | -8.615850e-47 |
| Msa0396700 | Msa0720870 | 0.831334 | 1.770437e-55 | -8.615850e-47 |
| Msa0396730 | Msa0720870 | 0.813491 | 2.491362e-51 | -8.615850e-47 |
| Msa0401440 | Msa0720870 | 0.825744 | 3.965679e-54 | -8.615850e-47 |
| Msa0405200 | Msa0720870 | 0.816679 | 4.882675e-52 | -8.615850e-47 |
| Msa0409500 | Msa0720870 | 0.820135 | 8.048837e-53 | -8.615850e-47 |
| Msa0410560 | Msa0720870 | 0.810263 | 1.257452e-50 | -8.615850e-47 |
| Msa0414480 | Msa0720870 | 0.831864 | 1.311006e-55 | -8.615850e-47 |
| Msa0423200 | Msa0720870 | 0.815347 | 9.686075e-52 | -8.615850e-47 |
| Msa0423220 | Msa0720870 | 0.829970 | 3.820235e-55 | -8.615850e-47 |
| Msa0443040 | Msa0720870 | 0.800796 | 1.217974e-48 | -8.615850e-47 |
| Msa0444210 | Msa0720870 | 0.812666 | 3.779973e-51 | -8.615850e-47 |
| Msa0448190 | Msa0720870 | 0.814580 | 1.432919e-51 | -8.615850e-47 |
| Msa0449500 | Msa0720870 | 0.801274 | 9.727627e-49 | -8.615850e-47 |
| Msa0464310 | Msa0720870 | 0.826713 | 2.332879e-54 | -8.615850e-47 |
| Msa0469450 | Msa0720870 | 0.820843 | 5.536704e-53 | -8.615850e-47 |
| Msa0469460 | Msa0720870 | 0.833916 | 4.051069e-56 | -8.615850e-47 |
| Msa0240990 | Msa0720870 | 0.800445 | 1.436550e-48 | -8.615850e-47 |
| Msa0242720 | Msa0720870 | 0.813049 | 3.115197e-51 | -8.615850e-47 |
| Msa0246140 | Msa0720870 | 0.822281 | 2.576557e-53 | -8.615850e-47 |
| Msa0248320 | Msa0720870 | 0.825761 | 3.930159e-54 | -8.615850e-47 |
| Msa0267700 | Msa0720870 | 0.802487 | 5.481170e-49 | -8.615850e-47 |
| Msa0269710 | Msa0720870 | 0.801942 | 7.095583e-49 | -8.615850e-47 |
| Msa0272210 | Msa0720870 | 0.803655 | 3.142660e-49 | -8.615850e-47 |
| Msa0274250 | Msa0720870 | 0.800721 | 1.262109e-48 | -8.615850e-47 |
| Msa0276580 | Msa0720870 | 0.808011 | 3.819124e-50 | -8.615850e-47 |
| Msa0277520 | Msa0720870 | 0.808546 | 2.936391e-50 | -8.615850e-47 |
| Msa0278460 | Msa0720870 | 0.814229 | 1.713580e-51 | -8.615850e-47 |
| Msa0281190 | Msa0720870 | 0.813938 | 1.986264e-51 | -8.615850e-47 |
| Msa0288540 | Msa0720870 | 0.800969 | 1.123200e-48 | -8.615850e-47 |
| Msa0303650 | Msa0720870 | 0.822824 | 1.926795e-53 | -8.615850e-47 |
| Msa0303900 | Msa0720870 | 0.844089 | 9.378495e-59 | -8.615850e-47 |
| Msa0316600 | Msa0720870 | 0.804588 | 2.010125e-49 | -8.615850e-47 |
| Msa0328090 | Msa0720870 | 0.829871 | 4.039346e-55 | -8.615850e-47 |
| Msa0333770 | Msa0720870 | 0.836134 | 1.117913e-56 | -8.615850e-47 |
| Msa0346170 | Msa0720870 | 0.801888 | 7.280851e-49 | -8.615850e-47 |
| Msa0348370 | Msa0720870 | 0.835390 | 1.725351e-56 | -8.615850e-47 |
| Msa0349910 | Msa0720870 | 0.823585 | 1.279885e-53 | -8.615850e-47 |
| Msa0354550 | Msa0720870 | 0.823293 | 1.497555e-53 | -8.615850e-47 |
| Msa0358470 | Msa0720870 | 0.803538 | 3.322820e-49 | -8.615850e-47 |
| Msa0482830 | Msa0720870 | 0.802451 | 5.576739e-49 | -8.615850e-47 |
| Msa0490060 | Msa0720870 | 0.845519 | 3.860909e-59 | -8.615850e-47 |
| Msa0490100 | Msa0720870 | 0.809574 | 1.769492e-50 | -8.615850e-47 |
| Msa0491780 | Msa0720870 | 0.830085 | 3.581727e-55 | -8.615850e-47 |
| Msa0491800 | Msa0720870 | 0.826447 | 2.698676e-54 | -8.615850e-47 |
| Msa0496060 | Msa0720870 | 0.811166 | 8.019954e-51 | -8.615850e-47 |
| Msa0496070 | Msa0720870 | 0.827268 | 1.718202e-54 | -8.615850e-47 |
| Msa0497680 | Msa0720870 | 0.810050 | 1.397356e-50 | -8.615850e-47 |
| Msa0501080 | Msa0720870 | 0.820954 | 5.219738e-53 | -8.615850e-47 |
| Msa0502940 | Msa0720870 | 0.800682 | 1.285178e-48 | -8.615850e-47 |
| Msa0502970 | Msa0720870 | 0.801546 | 8.554605e-49 | -8.615850e-47 |
| Msa0507600 | Msa0720870 | 0.819294 | 1.252443e-52 | -8.615850e-47 |
| Msa0515130 | Msa0720870 | 0.867421 | 1.386101e-65 | -8.615850e-47 |
| Msa0515150 | Msa0720870 | 0.865829 | 4.444950e-65 | -8.615850e-47 |
| Msa0535570 | Msa0720870 | 0.857588 | 1.473741e-62 | -8.615850e-47 |
| Msa0548790 | Msa0720870 | 0.803860 | 2.849852e-49 | -8.615850e-47 |
| Msa0568780 | Msa0720870 | -0.806782 | 6.959332e-50 | -8.615850e-47 |
| Msa0584370 | Msa0720870 | 0.800987 | 1.113555e-48 | -8.615850e-47 |
| Msa0587870 | Msa0720870 | 0.801782 | 7.654494e-49 | -8.615850e-47 |
| Msa0591490 | Msa0720870 | 0.864866 | 8.933781e-65 | -8.615850e-47 |
| Msa0593870 | Msa0720870 | 0.804064 | 2.584675e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720870 | MtrunA17_Chr5g0411691 | 96.067 | 178 | 7 | 0 | 1 | 178 | 62 | 239 | 2.91e-125 | 352 |
| Msa0720870 | MtrunA17_Chr2g0279821 | 55.429 | 175 | 68 | 3 | 1 | 172 | 62 | 229 | 1.41e-56 | 177 |
| Msa0720870 | MtrunA17_Chr5g0427961 | 52.841 | 176 | 62 | 5 | 1 | 174 | 6 | 162 | 1.57e-51 | 162 |
| Msa0720870 | MtrunA17_Chr4g0049541 | 44.242 | 165 | 85 | 2 | 1 | 164 | 62 | 220 | 3.22e-38 | 130 |
| Msa0720870 | MtrunA17_Chr2g0284911 | 36.364 | 110 | 68 | 1 | 1 | 108 | 77 | 186 | 9.51e-15 | 70.1 |
| Msa0720870 | MtrunA17_Chr8g0380021 | 35.455 | 110 | 69 | 1 | 1 | 108 | 78 | 187 | 6.74e-14 | 67.4 |
| Msa0720870 | MtrunA17_Chr4g0061691 | 34.951 | 103 | 65 | 1 | 1 | 101 | 63 | 165 | 4.23e-12 | 62.4 |
| Msa0720870 | MtrunA17_Chr3g0077501 | 34.234 | 111 | 71 | 1 | 1 | 109 | 62 | 172 | 5.06e-12 | 62.0 |
| Msa0720870 | MtrunA17_Chr2g0308271 | 33.636 | 110 | 71 | 1 | 1 | 108 | 34 | 143 | 6.59e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720870 | AT2G22630.1 | 52.000 | 175 | 74 | 3 | 1 | 174 | 62 | 227 | 3.35e-54 | 172 |
| Msa0720870 | AT2G22630.2 | 52.000 | 175 | 74 | 3 | 1 | 174 | 62 | 227 | 3.35e-54 | 172 |
| Msa0720870 | AT4G37940.2 | 51.705 | 176 | 74 | 3 | 1 | 175 | 1 | 166 | 3.64e-53 | 167 |
| Msa0720870 | AT4G37940.1 | 51.705 | 176 | 74 | 3 | 1 | 175 | 62 | 227 | 2.56e-52 | 167 |
| Msa0720870 | AT3G57230.1 | 50.857 | 175 | 79 | 5 | 1 | 174 | 62 | 230 | 1.35e-49 | 160 |
| Msa0720870 | AT3G57230.4 | 50.857 | 175 | 79 | 5 | 1 | 174 | 62 | 230 | 1.35e-49 | 160 |
| Msa0720870 | AT3G57230.5 | 62.602 | 123 | 45 | 1 | 1 | 122 | 28 | 150 | 1.59e-49 | 159 |
| Msa0720870 | AT3G57230.3 | 62.602 | 123 | 45 | 1 | 1 | 122 | 28 | 150 | 1.59e-49 | 159 |
| Msa0720870 | AT4G37940.4 | 46.591 | 176 | 69 | 3 | 1 | 175 | 62 | 213 | 3.18e-41 | 138 |
| Msa0720870 | AT2G14210.1 | 49.390 | 164 | 76 | 4 | 1 | 163 | 63 | 220 | 5.58e-35 | 122 |
| Msa0720870 | AT2G14210.2 | 49.390 | 164 | 76 | 4 | 1 | 163 | 63 | 220 | 7.65e-35 | 122 |
| Msa0720870 | AT4G37940.3 | 67.500 | 80 | 25 | 1 | 1 | 79 | 62 | 141 | 6.94e-31 | 110 |
| Msa0720870 | AT3G57230.2 | 63.095 | 84 | 30 | 1 | 1 | 83 | 62 | 145 | 3.87e-29 | 105 |
| Msa0720870 | AT4G09960.1 | 32.168 | 143 | 94 | 2 | 1 | 140 | 62 | 204 | 5.72e-15 | 70.5 |
| Msa0720870 | AT4G09960.6 | 32.168 | 143 | 94 | 2 | 1 | 140 | 63 | 205 | 6.04e-15 | 70.5 |
| Msa0720870 | AT4G09960.5 | 32.168 | 143 | 94 | 2 | 1 | 140 | 72 | 214 | 6.23e-15 | 70.5 |
| Msa0720870 | AT4G09960.3 | 32.168 | 143 | 94 | 2 | 1 | 140 | 88 | 230 | 8.02e-15 | 70.5 |
| Msa0720870 | AT2G42830.1 | 29.480 | 173 | 98 | 5 | 1 | 165 | 77 | 233 | 1.49e-14 | 69.7 |
| Msa0720870 | AT2G42830.2 | 29.143 | 175 | 98 | 5 | 1 | 165 | 77 | 235 | 1.66e-14 | 69.7 |
| Msa0720870 | AT4G18960.1 | 35.455 | 110 | 69 | 1 | 1 | 108 | 78 | 187 | 7.30e-14 | 67.8 |
| Msa0720870 | AT4G18960.4 | 35.714 | 112 | 70 | 1 | 1 | 110 | 64 | 175 | 7.72e-14 | 66.6 |
| Msa0720870 | AT4G18960.3 | 35.455 | 110 | 69 | 1 | 1 | 108 | 64 | 173 | 8.31e-14 | 67.4 |
| Msa0720870 | AT4G18960.2 | 35.455 | 110 | 69 | 1 | 1 | 108 | 64 | 173 | 8.31e-14 | 67.4 |
| Msa0720870 | AT4G09960.4 | 33.108 | 148 | 88 | 4 | 1 | 139 | 157 | 302 | 7.12e-13 | 65.9 |
| Msa0720870 | AT1G26310.1 | 32.800 | 125 | 76 | 3 | 1 | 117 | 63 | 187 | 5.84e-12 | 62.8 |
| Msa0720870 | AT4G09960.2 | 31.469 | 143 | 81 | 3 | 1 | 140 | 62 | 190 | 5.97e-12 | 62.0 |
| Msa0720870 | AT5G60910.2 | 24.571 | 175 | 120 | 3 | 1 | 163 | 1 | 175 | 8.91e-12 | 60.8 |
| Msa0720870 | AT2G45650.1 | 35.106 | 94 | 60 | 1 | 1 | 93 | 62 | 155 | 1.66e-11 | 61.2 |
| Msa0720870 | AT1G69120.3 | 32.727 | 110 | 72 | 2 | 1 | 108 | 1 | 110 | 1.85e-11 | 60.5 |
| Msa0720870 | AT5G60910.1 | 24.571 | 175 | 120 | 3 | 1 | 163 | 63 | 237 | 2.10e-11 | 60.8 |
| Msa0720870 | AT1G69120.2 | 32.727 | 110 | 72 | 2 | 1 | 108 | 63 | 172 | 3.37e-11 | 60.5 |
| Msa0720870 | AT1G69120.1 | 32.727 | 110 | 72 | 2 | 1 | 108 | 63 | 172 | 3.80e-11 | 60.5 |
| Msa0720870 | AT3G61120.1 | 36.667 | 90 | 57 | 0 | 4 | 93 | 65 | 154 | 3.82e-11 | 60.1 |
| Msa0720870 | AT3G58780.5 | 31.250 | 112 | 71 | 2 | 1 | 108 | 83 | 192 | 6.53e-11 | 59.7 |
| Msa0720870 | AT3G58780.1 | 31.250 | 112 | 71 | 2 | 1 | 108 | 77 | 186 | 7.21e-11 | 59.7 |
Find 34 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATGGGAGAACAGCTTTA+TGG | 0.252080 | 5_1:-17124114 | Msa0720870:CDS |
| GTTGACTCTCTAGGTCTTGT+AGG | 0.264680 | 5_1:+17124076 | None:intergenic |
| CATACCTTGACTTCAGATTC+TGG | 0.269362 | 5_1:+17124991 | None:intergenic |
| AAACACACAACTACACAAAA+AGG | 0.340273 | 5_1:-17123737 | Msa0720870:intron |
| TTACCTTTCGGTTCAGCTCT+TGG | 0.342679 | 5_1:+17123910 | None:intergenic |
| ATTCTGGATTTGTCCCTTGT+TGG | 0.350055 | 5_1:+17125007 | None:intergenic |
| CCAAGGAGTTCGCATGAAAA+AGG | 0.352891 | 5_1:-17124040 | Msa0720870:intron |
| CAATTTCCATACGGTGTTCA+TGG | 0.363241 | 5_1:-17123414 | Msa0720870:CDS |
| TTGAGTTCATAGGCAATTGA+TGG | 0.413482 | 5_1:-17124130 | Msa0720870:intron |
| CACAATATTCTTGCTCAGGC+TGG | 0.421967 | 5_1:+17123349 | None:intergenic |
| TGAAGTTGAAATAATGTTTG+TGG | 0.440444 | 5_1:+17123378 | None:intergenic |
| GTCTCACAATATTCTTGCTC+AGG | 0.460316 | 5_1:+17123345 | None:intergenic |
| ATTGAAATGTCGTAGGTGTA+TGG | 0.485215 | 5_1:-17123483 | Msa0720870:intron |
| ACAGGGAAACATAATCCATC+AGG | 0.520605 | 5_1:-17123803 | Msa0720870:intron |
| CATAATCCATCAGGAAAATG+TGG | 0.527713 | 5_1:-17123794 | Msa0720870:CDS |
| ACAAGACCTAGAGAGTCAAC+TGG | 0.528351 | 5_1:-17124073 | Msa0720870:CDS |
| CCATACGGTGTTCATGGAGG+AGG | 0.529836 | 5_1:-17123408 | Msa0720870:CDS |
| CCTCCTCCATGAACACCGTA+TGG | 0.536688 | 5_1:+17123408 | None:intergenic |
| TAAGTTCCAGTTGACTCTCT+AGG | 0.537150 | 5_1:+17124067 | None:intergenic |
| TGAGTTCATAGGCAATTGAT+GGG | 0.544313 | 5_1:-17124129 | Msa0720870:intron |
| CAAGAATATTGTGAGACCTC+AGG | 0.548980 | 5_1:-17123339 | Msa0720870:CDS |
| AAATGTGGAGCTCTATAAGA+AGG | 0.555562 | 5_1:-17123779 | Msa0720870:CDS |
| GCATTTGTTCAATTTCCATA+CGG | 0.559750 | 5_1:-17123423 | Msa0720870:CDS |
| TGTTGCACTTGCACTGCCTG+AGG | 0.561931 | 5_1:+17123323 | None:intergenic |
| AAATCCAGAATCTGAAGTCA+AGG | 0.573093 | 5_1:-17124995 | Msa0720870:intron |
| AAAGTCTACAAGAAAACCAT+AGG | 0.574987 | 5_1:-17124232 | Msa0720870:intron |
| CAACTGGAACTTAGCCTCCA+AGG | 0.576707 | 5_1:-17124057 | Msa0720870:CDS |
| TGAGAGATATAACATTTGCA+AGG | 0.603510 | 5_1:-17125034 | Msa0720870:CDS |
| ATTTGCAAGGAGGACCAACA+AGG | 0.639607 | 5_1:-17125021 | Msa0720870:CDS |
| AATCCAAGAGCTGAACCGAA+AGG | 0.649030 | 5_1:-17123913 | Msa0720870:intron |
| GAGATATAACATTTGCAAGG+AGG | 0.666849 | 5_1:-17125031 | Msa0720870:CDS |
| TTTCCATACGGTGTTCATGG+AGG | 0.673202 | 5_1:-17123411 | Msa0720870:CDS |
| TTTGCAAGGAGGACCAACAA+GGG | 0.676614 | 5_1:-17125020 | Msa0720870:CDS |
| AATGTCGTAGGTGTATGGCA+CGG | 0.795308 | 5_1:-17123478 | Msa0720870:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCATGAATAAACAAAAAAA+TGG | + | chr5_1:17123453-17123472 | None:intergenic | 15.0% |
| !! | TTATTCATGAATTTATTGAA+TGG | - | chr5_1:17123462-17123481 | Msa0720870:CDS | 15.0% |
| !! | AATTGATATATTTAATGCAT+GGG | + | chr5_1:17123689-17123708 | None:intergenic | 15.0% |
| !!! | TTTTAATTTCTTTAACTACA+GGG | - | chr5_1:17124549-17124568 | Msa0720870:intron | 15.0% |
| !! | TTCATGAATAAACAAAAAAA+TGG | + | chr5_1:17123453-17123472 | None:intergenic | 15.0% |
| !! | TTATTCATGAATTTATTGAA+TGG | - | chr5_1:17123462-17123481 | Msa0720870:CDS | 15.0% |
| !! | AATTGATATATTTAATGCAT+GGG | + | chr5_1:17123689-17123708 | None:intergenic | 15.0% |
| !!! | TTTTAATTTCTTTAACTACA+GGG | - | chr5_1:17124549-17124568 | Msa0720870:intron | 15.0% |
| !! | ATTGATATATTTAATGCATG+GGG | + | chr5_1:17123688-17123707 | None:intergenic | 20.0% |
| !! | CAATTGATATATTTAATGCA+TGG | + | chr5_1:17123690-17123709 | None:intergenic | 20.0% |
| !! | ATCAAGTAAAATAATGTCAA+TGG | + | chr5_1:17124068-17124087 | None:intergenic | 20.0% |
| !!! | GTTTTAATTTCTTTAACTAC+AGG | - | chr5_1:17124548-17124567 | Msa0720870:intron | 20.0% |
| !! | ATTGATATATTTAATGCATG+GGG | + | chr5_1:17123688-17123707 | None:intergenic | 20.0% |
| !! | CAATTGATATATTTAATGCA+TGG | + | chr5_1:17123690-17123709 | None:intergenic | 20.0% |
| !! | ATCAAGTAAAATAATGTCAA+TGG | + | chr5_1:17124068-17124087 | None:intergenic | 20.0% |
| !!! | GTTTTAATTTCTTTAACTAC+AGG | - | chr5_1:17124548-17124567 | Msa0720870:intron | 20.0% |
| !!! | TTCCTTAATTTCTAGTGTTT+AGG | + | chr5_1:17123731-17123750 | None:intergenic | 25.0% |
| ! | ACATAATAGTTTATGAAGCA+CGG | - | chr5_1:17123759-17123778 | Msa0720870:CDS | 25.0% |
| ! | ACATAATTCAGTGTAATCAT+AGG | - | chr5_1:17123851-17123870 | Msa0720870:intron | 25.0% |
| ! | CATATTTCATATCTGATAGT+AGG | - | chr5_1:17123997-17124016 | Msa0720870:intron | 25.0% |
| ! | AAAAGGAAACAAAATGTGAT+TGG | + | chr5_1:17124039-17124058 | None:intergenic | 25.0% |
| ! | AATGTCAATGGTTAATGAAA+AGG | + | chr5_1:17124056-17124075 | None:intergenic | 25.0% |
| !!! | TACTTGATAACTGATAGTTT+TGG | - | chr5_1:17124080-17124099 | Msa0720870:CDS | 25.0% |
| ! | AATTATCTTGATCAAGTAAG+TGG | + | chr5_1:17124367-17124386 | None:intergenic | 25.0% |
| !!! | TGATTCAACTTGTTAATTTC+TGG | + | chr5_1:17124406-17124425 | None:intergenic | 25.0% |
| ! | TGAAGTTGAAATAATGTTTG+TGG | + | chr5_1:17124994-17125013 | None:intergenic | 25.0% |
| !!! | TTCCTTAATTTCTAGTGTTT+AGG | + | chr5_1:17123731-17123750 | None:intergenic | 25.0% |
| ! | ACATAATAGTTTATGAAGCA+CGG | - | chr5_1:17123759-17123778 | Msa0720870:CDS | 25.0% |
| ! | ACATAATTCAGTGTAATCAT+AGG | - | chr5_1:17123851-17123870 | Msa0720870:intron | 25.0% |
| ! | CATATTTCATATCTGATAGT+AGG | - | chr5_1:17123997-17124016 | Msa0720870:intron | 25.0% |
| ! | AAAAGGAAACAAAATGTGAT+TGG | + | chr5_1:17124039-17124058 | None:intergenic | 25.0% |
| ! | AATGTCAATGGTTAATGAAA+AGG | + | chr5_1:17124056-17124075 | None:intergenic | 25.0% |
| !!! | TACTTGATAACTGATAGTTT+TGG | - | chr5_1:17124080-17124099 | Msa0720870:CDS | 25.0% |
| ! | AATTATCTTGATCAAGTAAG+TGG | + | chr5_1:17124367-17124386 | None:intergenic | 25.0% |
| !!! | TGATTCAACTTGTTAATTTC+TGG | + | chr5_1:17124406-17124425 | None:intergenic | 25.0% |
| ! | TGAAGTTGAAATAATGTTTG+TGG | + | chr5_1:17124994-17125013 | None:intergenic | 25.0% |
| TGAGAGATATAACATTTGCA+AGG | - | chr5_1:17123335-17123354 | Msa0720870:CDS | 30.0% | |
| ! | TAAATTATGTGCCCATTTTG+GGG | + | chr5_1:17123567-17123586 | None:intergenic | 30.0% |
| ! | GTAAATTATGTGCCCATTTT+GGG | + | chr5_1:17123568-17123587 | None:intergenic | 30.0% |
| ! | TGTAAATTATGTGCCCATTT+TGG | + | chr5_1:17123569-17123588 | None:intergenic | 30.0% |
| GTGATGTAACTAGATATCTT+TGG | - | chr5_1:17123594-17123613 | Msa0720870:intron | 30.0% | |
| !! | AGTTTTGACAGTTGAAAGAT+GGG | + | chr5_1:17123620-17123639 | None:intergenic | 30.0% |
| !! | AAGTTTTGACAGTTGAAAGA+TGG | + | chr5_1:17123621-17123640 | None:intergenic | 30.0% |
| TGCCTAAACACTAGAAATTA+AGG | - | chr5_1:17123726-17123745 | Msa0720870:intron | 30.0% | |
| CCTCAAATTATTATCCGTAT+TGG | + | chr5_1:17123826-17123845 | None:intergenic | 30.0% | |
| CCAATACGGATAATAATTTG+AGG | - | chr5_1:17123823-17123842 | Msa0720870:intron | 30.0% | |
| !!! | ATAACTGATAGTTTTGGCAA+AGG | - | chr5_1:17124086-17124105 | Msa0720870:CDS | 30.0% |
| !!! | TAACTGATAGTTTTGGCAAA+GGG | - | chr5_1:17124087-17124106 | Msa0720870:CDS | 30.0% |
| AAAGTCTACAAGAAAACCAT+AGG | - | chr5_1:17124137-17124156 | Msa0720870:intron | 30.0% | |
| ATGCTGAATGAATTAGTTGA+AGG | + | chr5_1:17124168-17124187 | None:intergenic | 30.0% | |
| AATGTTAGTGCTCTTATACA+TGG | + | chr5_1:17124219-17124238 | None:intergenic | 30.0% | |
| !!! | CACTAACATTTTGAGTTCAT+AGG | - | chr5_1:17124229-17124248 | Msa0720870:intron | 30.0% |
| TTCGAGAGAAATATTAGTGA+AGG | + | chr5_1:17124501-17124520 | None:intergenic | 30.0% | |
| AAACACACAACTACACAAAA+AGG | - | chr5_1:17124632-17124651 | Msa0720870:intron | 30.0% | |
| GAGTTACATAAAATAGCAGT+TGG | - | chr5_1:17124732-17124751 | Msa0720870:intron | 30.0% | |
| GCATTTGTTCAATTTCCATA+CGG | - | chr5_1:17124946-17124965 | Msa0720870:intron | 30.0% | |
| TGAGAGATATAACATTTGCA+AGG | - | chr5_1:17123335-17123354 | Msa0720870:CDS | 30.0% | |
| ! | TAAATTATGTGCCCATTTTG+GGG | + | chr5_1:17123567-17123586 | None:intergenic | 30.0% |
| ! | GTAAATTATGTGCCCATTTT+GGG | + | chr5_1:17123568-17123587 | None:intergenic | 30.0% |
| ! | TGTAAATTATGTGCCCATTT+TGG | + | chr5_1:17123569-17123588 | None:intergenic | 30.0% |
| GTGATGTAACTAGATATCTT+TGG | - | chr5_1:17123594-17123613 | Msa0720870:intron | 30.0% | |
| !! | AGTTTTGACAGTTGAAAGAT+GGG | + | chr5_1:17123620-17123639 | None:intergenic | 30.0% |
| !! | AAGTTTTGACAGTTGAAAGA+TGG | + | chr5_1:17123621-17123640 | None:intergenic | 30.0% |
| TGCCTAAACACTAGAAATTA+AGG | - | chr5_1:17123726-17123745 | Msa0720870:intron | 30.0% | |
| CCTCAAATTATTATCCGTAT+TGG | + | chr5_1:17123826-17123845 | None:intergenic | 30.0% | |
| CCAATACGGATAATAATTTG+AGG | - | chr5_1:17123823-17123842 | Msa0720870:intron | 30.0% | |
| !!! | ATAACTGATAGTTTTGGCAA+AGG | - | chr5_1:17124086-17124105 | Msa0720870:CDS | 30.0% |
| !!! | TAACTGATAGTTTTGGCAAA+GGG | - | chr5_1:17124087-17124106 | Msa0720870:CDS | 30.0% |
| AAAGTCTACAAGAAAACCAT+AGG | - | chr5_1:17124137-17124156 | Msa0720870:intron | 30.0% | |
| ATGCTGAATGAATTAGTTGA+AGG | + | chr5_1:17124168-17124187 | None:intergenic | 30.0% | |
| AATGTTAGTGCTCTTATACA+TGG | + | chr5_1:17124219-17124238 | None:intergenic | 30.0% | |
| !!! | CACTAACATTTTGAGTTCAT+AGG | - | chr5_1:17124229-17124248 | Msa0720870:intron | 30.0% |
| TTCGAGAGAAATATTAGTGA+AGG | + | chr5_1:17124501-17124520 | None:intergenic | 30.0% | |
| AAACACACAACTACACAAAA+AGG | - | chr5_1:17124632-17124651 | Msa0720870:intron | 30.0% | |
| GAGTTACATAAAATAGCAGT+TGG | - | chr5_1:17124732-17124751 | Msa0720870:intron | 30.0% | |
| GCATTTGTTCAATTTCCATA+CGG | - | chr5_1:17124946-17124965 | Msa0720870:intron | 30.0% | |
| GAGATATAACATTTGCAAGG+AGG | - | chr5_1:17123338-17123357 | Msa0720870:CDS | 35.0% | |
| ! | AAATCCAGAATCTGAAGTCA+AGG | - | chr5_1:17123374-17123393 | Msa0720870:CDS | 35.0% |
| TACTAATCTTCTCCCCAAAA+TGG | - | chr5_1:17123552-17123571 | Msa0720870:intron | 35.0% | |
| ACTAATCTTCTCCCCAAAAT+GGG | - | chr5_1:17123553-17123572 | Msa0720870:intron | 35.0% | |
| TGTTTAGGCAGTGCTTAATT+AGG | + | chr5_1:17123716-17123735 | None:intergenic | 35.0% | |
| ! | TGTAATCATAGGTGTTGTGT+CGG | - | chr5_1:17123862-17123881 | Msa0720870:intron | 35.0% |
| GTGATTGGATGATATTCAAC+TGG | + | chr5_1:17124024-17124043 | None:intergenic | 35.0% | |
| ! | AAAGGGAGGCAGAAATTTTA+AGG | - | chr5_1:17124104-17124123 | Msa0720870:CDS | 35.0% |
| TTAGTTGAAGGTTGTACCTA+TGG | + | chr5_1:17124156-17124175 | None:intergenic | 35.0% | |
| TTGAGTTCATAGGCAATTGA+TGG | - | chr5_1:17124239-17124258 | Msa0720870:CDS | 35.0% | |
| TGAGTTCATAGGCAATTGAT+GGG | - | chr5_1:17124240-17124259 | Msa0720870:CDS | 35.0% | |
| ! | CAAGTTGAATCAAATTCTGC+AGG | - | chr5_1:17124414-17124433 | Msa0720870:intron | 35.0% |
| CATAATCCATCAGGAAAATG+TGG | - | chr5_1:17124575-17124594 | Msa0720870:intron | 35.0% | |
| AAATGTGGAGCTCTATAAGA+AGG | - | chr5_1:17124590-17124609 | Msa0720870:intron | 35.0% | |
| ! | GTTGTGTGTTTTCTTGTTGA+AGG | + | chr5_1:17124623-17124642 | None:intergenic | 35.0% |
| !! | CGCATCTTACTTAATTTGCA+CGG | - | chr5_1:17124660-17124679 | Msa0720870:intron | 35.0% |
| CATCACATTCACTTAAGCTT+AGG | - | chr5_1:17124848-17124867 | Msa0720870:intron | 35.0% | |
| TGTGACAATTGAAATGTCGT+AGG | - | chr5_1:17124879-17124898 | Msa0720870:intron | 35.0% | |
| ATTGAAATGTCGTAGGTGTA+TGG | - | chr5_1:17124886-17124905 | Msa0720870:intron | 35.0% | |
| ! | AACAAATGCGTTTTTGCTTG+TGG | + | chr5_1:17124935-17124954 | None:intergenic | 35.0% |
| GAGATATAACATTTGCAAGG+AGG | - | chr5_1:17123338-17123357 | Msa0720870:CDS | 35.0% | |
| ! | AAATCCAGAATCTGAAGTCA+AGG | - | chr5_1:17123374-17123393 | Msa0720870:CDS | 35.0% |
| TACTAATCTTCTCCCCAAAA+TGG | - | chr5_1:17123552-17123571 | Msa0720870:intron | 35.0% | |
| ACTAATCTTCTCCCCAAAAT+GGG | - | chr5_1:17123553-17123572 | Msa0720870:intron | 35.0% | |
| TGTTTAGGCAGTGCTTAATT+AGG | + | chr5_1:17123716-17123735 | None:intergenic | 35.0% | |
| ! | TGTAATCATAGGTGTTGTGT+CGG | - | chr5_1:17123862-17123881 | Msa0720870:intron | 35.0% |
| GTGATTGGATGATATTCAAC+TGG | + | chr5_1:17124024-17124043 | None:intergenic | 35.0% | |
| ! | AAAGGGAGGCAGAAATTTTA+AGG | - | chr5_1:17124104-17124123 | Msa0720870:CDS | 35.0% |
| TTAGTTGAAGGTTGTACCTA+TGG | + | chr5_1:17124156-17124175 | None:intergenic | 35.0% | |
| TTGAGTTCATAGGCAATTGA+TGG | - | chr5_1:17124239-17124258 | Msa0720870:CDS | 35.0% | |
| TGAGTTCATAGGCAATTGAT+GGG | - | chr5_1:17124240-17124259 | Msa0720870:CDS | 35.0% | |
| ! | CAAGTTGAATCAAATTCTGC+AGG | - | chr5_1:17124414-17124433 | Msa0720870:intron | 35.0% |
| CATAATCCATCAGGAAAATG+TGG | - | chr5_1:17124575-17124594 | Msa0720870:intron | 35.0% | |
| AAATGTGGAGCTCTATAAGA+AGG | - | chr5_1:17124590-17124609 | Msa0720870:intron | 35.0% | |
| ! | GTTGTGTGTTTTCTTGTTGA+AGG | + | chr5_1:17124623-17124642 | None:intergenic | 35.0% |
| !! | CGCATCTTACTTAATTTGCA+CGG | - | chr5_1:17124660-17124679 | Msa0720870:intron | 35.0% |
| CATCACATTCACTTAAGCTT+AGG | - | chr5_1:17124848-17124867 | Msa0720870:intron | 35.0% | |
| TGTGACAATTGAAATGTCGT+AGG | - | chr5_1:17124879-17124898 | Msa0720870:intron | 35.0% | |
| ATTGAAATGTCGTAGGTGTA+TGG | - | chr5_1:17124886-17124905 | Msa0720870:intron | 35.0% | |
| ! | AACAAATGCGTTTTTGCTTG+TGG | + | chr5_1:17124935-17124954 | None:intergenic | 35.0% |
| ATTCTGGATTTGTCCCTTGT+TGG | + | chr5_1:17123365-17123384 | None:intergenic | 40.0% | |
| CATACCTTGACTTCAGATTC+TGG | + | chr5_1:17123381-17123400 | None:intergenic | 40.0% | |
| ! | CAGAATCTGAAGTCAAGGTA+TGG | - | chr5_1:17123379-17123398 | Msa0720870:CDS | 40.0% |
| ACTGTCAAAACTTCCAAGAG+TGG | - | chr5_1:17123628-17123647 | Msa0720870:intron | 40.0% | |
| ! | TATTATCCGTATTGGCGTGT+CGG | + | chr5_1:17123818-17123837 | None:intergenic | 40.0% |
| TTGATGGGAGAACAGCTTTA+TGG | - | chr5_1:17124255-17124274 | Msa0720870:CDS | 40.0% | |
| ! | TAAGTTCCAGTTGACTCTCT+AGG | + | chr5_1:17124305-17124324 | None:intergenic | 40.0% |
| TGCTGCTAAGAGTTACCTTT+CGG | + | chr5_1:17124474-17124493 | None:intergenic | 40.0% | |
| ACAGGGAAACATAATCCATC+AGG | - | chr5_1:17124566-17124585 | Msa0720870:intron | 40.0% | |
| ! | GTGTGTTTTCTTGTTGAAGG+AGG | + | chr5_1:17124620-17124639 | None:intergenic | 40.0% |
| ! | TGCGAGTCTCTTGTGATTTT+GGG | + | chr5_1:17124690-17124709 | None:intergenic | 40.0% |
| CAATTTCCATACGGTGTTCA+TGG | - | chr5_1:17124955-17124974 | Msa0720870:intron | 40.0% | |
| GTCTCACAATATTCTTGCTC+AGG | + | chr5_1:17125027-17125046 | None:intergenic | 40.0% | |
| CAAGAATATTGTGAGACCTC+AGG | - | chr5_1:17125030-17125049 | Msa0720870:CDS | 40.0% | |
| ATTCTGGATTTGTCCCTTGT+TGG | + | chr5_1:17123365-17123384 | None:intergenic | 40.0% | |
| CATACCTTGACTTCAGATTC+TGG | + | chr5_1:17123381-17123400 | None:intergenic | 40.0% | |
| ! | CAGAATCTGAAGTCAAGGTA+TGG | - | chr5_1:17123379-17123398 | Msa0720870:CDS | 40.0% |
| ACTGTCAAAACTTCCAAGAG+TGG | - | chr5_1:17123628-17123647 | Msa0720870:intron | 40.0% | |
| ! | TATTATCCGTATTGGCGTGT+CGG | + | chr5_1:17123818-17123837 | None:intergenic | 40.0% |
| TTGATGGGAGAACAGCTTTA+TGG | - | chr5_1:17124255-17124274 | Msa0720870:CDS | 40.0% | |
| ! | TAAGTTCCAGTTGACTCTCT+AGG | + | chr5_1:17124305-17124324 | None:intergenic | 40.0% |
| TGCTGCTAAGAGTTACCTTT+CGG | + | chr5_1:17124474-17124493 | None:intergenic | 40.0% | |
| ACAGGGAAACATAATCCATC+AGG | - | chr5_1:17124566-17124585 | Msa0720870:intron | 40.0% | |
| ! | GTGTGTTTTCTTGTTGAAGG+AGG | + | chr5_1:17124620-17124639 | None:intergenic | 40.0% |
| ! | TGCGAGTCTCTTGTGATTTT+GGG | + | chr5_1:17124690-17124709 | None:intergenic | 40.0% |
| CAATTTCCATACGGTGTTCA+TGG | - | chr5_1:17124955-17124974 | Msa0720870:intron | 40.0% | |
| GTCTCACAATATTCTTGCTC+AGG | + | chr5_1:17125027-17125046 | None:intergenic | 40.0% | |
| CAAGAATATTGTGAGACCTC+AGG | - | chr5_1:17125030-17125049 | Msa0720870:CDS | 40.0% | |
| ATTTGCAAGGAGGACCAACA+AGG | - | chr5_1:17123348-17123367 | Msa0720870:CDS | 45.0% | |
| TTTGCAAGGAGGACCAACAA+GGG | - | chr5_1:17123349-17123368 | Msa0720870:CDS | 45.0% | |
| GAGTACAATCATGCCACTCT+TGG | + | chr5_1:17123644-17123663 | None:intergenic | 45.0% | |
| TATGAAGCACGTACACCCTT+CGG | + | chr5_1:17123930-17123949 | None:intergenic | 45.0% | |
| !!! | CTGATAGTTTTGGCAAAGGG+AGG | - | chr5_1:17124090-17124109 | Msa0720870:CDS | 45.0% |
| ! | GTTGACTCTCTAGGTCTTGT+AGG | + | chr5_1:17124296-17124315 | None:intergenic | 45.0% |
| ACAAGACCTAGAGAGTCAAC+TGG | - | chr5_1:17124296-17124315 | Msa0720870:intron | 45.0% | |
| ! | TTTTCATGCGAACTCCTTGG+AGG | + | chr5_1:17124329-17124348 | None:intergenic | 45.0% |
| !! | CCTTTTTCATGCGAACTCCT+TGG | + | chr5_1:17124332-17124351 | None:intergenic | 45.0% |
| CCAAGGAGTTCGCATGAAAA+AGG | - | chr5_1:17124329-17124348 | Msa0720870:intron | 45.0% | |
| AATCCAAGAGCTGAACCGAA+AGG | - | chr5_1:17124456-17124475 | Msa0720870:intron | 45.0% | |
| TTACCTTTCGGTTCAGCTCT+TGG | + | chr5_1:17124462-17124481 | None:intergenic | 45.0% | |
| ! | AGAGCTCCACATTTTCCTGA+TGG | + | chr5_1:17124584-17124603 | None:intergenic | 45.0% |
| ! | GCGAGTCTCTTGTGATTTTG+GGG | + | chr5_1:17124689-17124708 | None:intergenic | 45.0% |
| ! | GTGCGAGTCTCTTGTGATTT+TGG | + | chr5_1:17124691-17124710 | None:intergenic | 45.0% |
| ATAGCAGTGCTACATCACAG+CGG | + | chr5_1:17124816-17124835 | None:intergenic | 45.0% | |
| AATGTCGTAGGTGTATGGCA+CGG | - | chr5_1:17124891-17124910 | Msa0720870:intron | 45.0% | |
| TTTCCATACGGTGTTCATGG+AGG | - | chr5_1:17124958-17124977 | Msa0720870:intron | 45.0% | |
| CACAATATTCTTGCTCAGGC+TGG | + | chr5_1:17125023-17125042 | None:intergenic | 45.0% | |
| ATTTGCAAGGAGGACCAACA+AGG | - | chr5_1:17123348-17123367 | Msa0720870:CDS | 45.0% | |
| TTTGCAAGGAGGACCAACAA+GGG | - | chr5_1:17123349-17123368 | Msa0720870:CDS | 45.0% | |
| GAGTACAATCATGCCACTCT+TGG | + | chr5_1:17123644-17123663 | None:intergenic | 45.0% | |
| TATGAAGCACGTACACCCTT+CGG | + | chr5_1:17123930-17123949 | None:intergenic | 45.0% | |
| !!! | CTGATAGTTTTGGCAAAGGG+AGG | - | chr5_1:17124090-17124109 | Msa0720870:CDS | 45.0% |
| ! | GTTGACTCTCTAGGTCTTGT+AGG | + | chr5_1:17124296-17124315 | None:intergenic | 45.0% |
| ACAAGACCTAGAGAGTCAAC+TGG | - | chr5_1:17124296-17124315 | Msa0720870:intron | 45.0% | |
| ! | TTTTCATGCGAACTCCTTGG+AGG | + | chr5_1:17124329-17124348 | None:intergenic | 45.0% |
| !! | CCTTTTTCATGCGAACTCCT+TGG | + | chr5_1:17124332-17124351 | None:intergenic | 45.0% |
| CCAAGGAGTTCGCATGAAAA+AGG | - | chr5_1:17124329-17124348 | Msa0720870:intron | 45.0% | |
| AATCCAAGAGCTGAACCGAA+AGG | - | chr5_1:17124456-17124475 | Msa0720870:intron | 45.0% | |
| TTACCTTTCGGTTCAGCTCT+TGG | + | chr5_1:17124462-17124481 | None:intergenic | 45.0% | |
| ! | AGAGCTCCACATTTTCCTGA+TGG | + | chr5_1:17124584-17124603 | None:intergenic | 45.0% |
| ! | GCGAGTCTCTTGTGATTTTG+GGG | + | chr5_1:17124689-17124708 | None:intergenic | 45.0% |
| ! | GTGCGAGTCTCTTGTGATTT+TGG | + | chr5_1:17124691-17124710 | None:intergenic | 45.0% |
| ATAGCAGTGCTACATCACAG+CGG | + | chr5_1:17124816-17124835 | None:intergenic | 45.0% | |
| AATGTCGTAGGTGTATGGCA+CGG | - | chr5_1:17124891-17124910 | Msa0720870:intron | 45.0% | |
| TTTCCATACGGTGTTCATGG+AGG | - | chr5_1:17124958-17124977 | Msa0720870:intron | 45.0% | |
| CACAATATTCTTGCTCAGGC+TGG | + | chr5_1:17125023-17125042 | None:intergenic | 45.0% | |
| ATGAAGCACGGACACAGACA+CGG | - | chr5_1:17123771-17123790 | Msa0720870:CDS | 50.0% | |
| TAGACACCGACACGCCAATA+CGG | - | chr5_1:17123809-17123828 | Msa0720870:intron | 50.0% | |
| ! | CATAGGTGTTGTGTCGGTGT+TGG | - | chr5_1:17123868-17123887 | Msa0720870:intron | 50.0% |
| CAACTGGAACTTAGCCTCCA+AGG | - | chr5_1:17124312-17124331 | Msa0720870:intron | 50.0% | |
| CGTGTATCGCGAAACAGTAG+TGG | - | chr5_1:17124778-17124797 | Msa0720870:intron | 50.0% | |
| ATGAAGCACGGACACAGACA+CGG | - | chr5_1:17123771-17123790 | Msa0720870:CDS | 50.0% | |
| TAGACACCGACACGCCAATA+CGG | - | chr5_1:17123809-17123828 | Msa0720870:intron | 50.0% | |
| ! | CATAGGTGTTGTGTCGGTGT+TGG | - | chr5_1:17123868-17123887 | Msa0720870:intron | 50.0% |
| CAACTGGAACTTAGCCTCCA+AGG | - | chr5_1:17124312-17124331 | Msa0720870:intron | 50.0% | |
| CGTGTATCGCGAAACAGTAG+TGG | - | chr5_1:17124778-17124797 | Msa0720870:intron | 50.0% | |
| GATTAGGCGTGTCACGGTGT+CGG | + | chr5_1:17123908-17123927 | None:intergenic | 55.0% | |
| ! | CCTTCGGATTAGGCGTGTCA+CGG | + | chr5_1:17123914-17123933 | None:intergenic | 55.0% |
| CGTGACACGCCTAATCCGAA+GGG | - | chr5_1:17123912-17123931 | Msa0720870:intron | 55.0% | |
| GCACGTACACCCTTCGGATT+AGG | + | chr5_1:17123924-17123943 | None:intergenic | 55.0% | |
| CGCGACTCACAACACTGATG+TGG | + | chr5_1:17124713-17124732 | None:intergenic | 55.0% | |
| CCTCCTCCATGAACACCGTA+TGG | + | chr5_1:17124964-17124983 | None:intergenic | 55.0% | |
| CCATACGGTGTTCATGGAGG+AGG | - | chr5_1:17124961-17124980 | Msa0720870:intron | 55.0% | |
| TGTTGCACTTGCACTGCCTG+AGG | + | chr5_1:17125049-17125068 | None:intergenic | 55.0% | |
| GATTAGGCGTGTCACGGTGT+CGG | + | chr5_1:17123908-17123927 | None:intergenic | 55.0% | |
| ! | CCTTCGGATTAGGCGTGTCA+CGG | + | chr5_1:17123914-17123933 | None:intergenic | 55.0% |
| CGTGACACGCCTAATCCGAA+GGG | - | chr5_1:17123912-17123931 | Msa0720870:intron | 55.0% | |
| GCACGTACACCCTTCGGATT+AGG | + | chr5_1:17123924-17123943 | None:intergenic | 55.0% | |
| CGCGACTCACAACACTGATG+TGG | + | chr5_1:17124713-17124732 | None:intergenic | 55.0% | |
| CCTCCTCCATGAACACCGTA+TGG | + | chr5_1:17124964-17124983 | None:intergenic | 55.0% | |
| CCATACGGTGTTCATGGAGG+AGG | - | chr5_1:17124961-17124980 | Msa0720870:intron | 55.0% | |
| TGTTGCACTTGCACTGCCTG+AGG | + | chr5_1:17125049-17125068 | None:intergenic | 55.0% | |
| ! | TCACGGTGTCGGATACGCGT+CGG | + | chr5_1:17123897-17123916 | None:intergenic | 60.0% |
| CCGTGACACGCCTAATCCGA+AGG | - | chr5_1:17123911-17123930 | Msa0720870:intron | 60.0% | |
| ! | TCACGGTGTCGGATACGCGT+CGG | + | chr5_1:17123897-17123916 | None:intergenic | 60.0% |
| CCGTGACACGCCTAATCCGA+AGG | - | chr5_1:17123911-17123930 | Msa0720870:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 17123320 | 17125071 | 17123320 | ID=Msa0720870;Name=Msa0720870 |
| chr5_1 | mRNA | 17123320 | 17125071 | 17123320 | ID=Msa0720870-mRNA-1;Parent=Msa0720870;Name=Msa0720870-mRNA-1;_AED=0.03;_eAED=0.03;_QI=1|0|0|1|1|0.83|6|0|178 |
| chr5_1 | exon | 17124996 | 17125071 | 17124996 | ID=Msa0720870-mRNA-1:exon:6503;Parent=Msa0720870-mRNA-1 |
| chr5_1 | exon | 17124233 | 17124294 | 17124233 | ID=Msa0720870-mRNA-1:exon:6502;Parent=Msa0720870-mRNA-1 |
| chr5_1 | exon | 17124041 | 17124140 | 17124041 | ID=Msa0720870-mRNA-1:exon:6501;Parent=Msa0720870-mRNA-1 |
| chr5_1 | exon | 17123914 | 17123955 | 17123914 | ID=Msa0720870-mRNA-1:exon:6500;Parent=Msa0720870-mRNA-1 |
| chr5_1 | exon | 17123738 | 17123821 | 17123738 | ID=Msa0720870-mRNA-1:exon:6499;Parent=Msa0720870-mRNA-1 |
| chr5_1 | exon | 17123320 | 17123490 | 17123320 | ID=Msa0720870-mRNA-1:exon:6498;Parent=Msa0720870-mRNA-1 |
| chr5_1 | five_prime_UTR | 17125071 | 17125071 | 17125071 | ID=Msa0720870-mRNA-1:five_prime_utr;Parent=Msa0720870-mRNA-1 |
| chr5_1 | CDS | 17124996 | 17125070 | 17124996 | ID=Msa0720870-mRNA-1:cds;Parent=Msa0720870-mRNA-1 |
| chr5_1 | CDS | 17124233 | 17124294 | 17124233 | ID=Msa0720870-mRNA-1:cds;Parent=Msa0720870-mRNA-1 |
| chr5_1 | CDS | 17124041 | 17124140 | 17124041 | ID=Msa0720870-mRNA-1:cds;Parent=Msa0720870-mRNA-1 |
| chr5_1 | CDS | 17123914 | 17123955 | 17123914 | ID=Msa0720870-mRNA-1:cds;Parent=Msa0720870-mRNA-1 |
| chr5_1 | CDS | 17123738 | 17123821 | 17123738 | ID=Msa0720870-mRNA-1:cds;Parent=Msa0720870-mRNA-1 |
| chr5_1 | CDS | 17123320 | 17123490 | 17123320 | ID=Msa0720870-mRNA-1:cds;Parent=Msa0720870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
