Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0692090 | XP_013456728.1 | 97.734 | 353 | 8 | 0 | 1 | 353 | 5 | 357 | 0.0 | 720 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0692090 | sp|Q5XLY0|ANR_GINBI | 45.882 | 340 | 161 | 6 | 13 | 341 | 4 | 331 | 1.76e-91 | 280 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0692090 | A0A072ULV1 | 97.734 | 353 | 8 | 0 | 1 | 353 | 5 | 357 | 0.0 | 720 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0692090 | 0.875616 | 2.678454e-68 | -8.615850e-47 |
| Msa0011060 | Msa0692090 | -0.805850 | 1.093688e-49 | -8.615850e-47 |
| Msa0011100 | Msa0692090 | -0.804793 | 1.821182e-49 | -8.615850e-47 |
| Msa0013040 | Msa0692090 | 0.801572 | 8.451349e-49 | -8.615850e-47 |
| Msa0014590 | Msa0692090 | 0.822343 | 2.492211e-53 | -8.615850e-47 |
| Msa0027860 | Msa0692090 | 0.850931 | 1.234133e-60 | -8.615850e-47 |
| Msa0033190 | Msa0692090 | -0.812621 | 3.865669e-51 | -8.615850e-47 |
| Msa0059880 | Msa0692090 | 0.846290 | 2.383348e-59 | -8.615850e-47 |
| Msa0063540 | Msa0692090 | 0.823570 | 1.289959e-53 | -8.615850e-47 |
| Msa0064990 | Msa0692090 | 0.801928 | 7.142037e-49 | -8.615850e-47 |
| Msa0073110 | Msa0692090 | 0.801000 | 1.106560e-48 | -8.615850e-47 |
| Msa0075560 | Msa0692090 | 0.820469 | 6.748014e-53 | -8.615850e-47 |
| Msa0079840 | Msa0692090 | -0.810481 | 1.128256e-50 | -8.615850e-47 |
| Msa0108350 | Msa0692090 | 0.803001 | 4.292343e-49 | -8.615850e-47 |
| Msa0609460 | Msa0692090 | 0.901986 | 1.537613e-78 | -8.615850e-47 |
| Msa0628140 | Msa0692090 | 0.803543 | 3.315838e-49 | -8.615850e-47 |
| Msa0631700 | Msa0692090 | 0.844098 | 9.328551e-59 | -8.615850e-47 |
| Msa0632040 | Msa0692090 | -0.802726 | 4.892600e-49 | -8.615850e-47 |
| Msa0634290 | Msa0692090 | 0.802479 | 5.501274e-49 | -8.615850e-47 |
| Msa0640290 | Msa0692090 | 0.805634 | 1.214237e-49 | -8.615850e-47 |
| Msa0643840 | Msa0692090 | 0.835875 | 1.300859e-56 | -8.615850e-47 |
| Msa0650100 | Msa0692090 | 0.925248 | 2.372190e-90 | -8.615850e-47 |
| Msa0662670 | Msa0692090 | -0.802619 | 5.148437e-49 | -8.615850e-47 |
| Msa0665830 | Msa0692090 | 0.810067 | 1.385734e-50 | -8.615850e-47 |
| Msa0670360 | Msa0692090 | 0.855080 | 8.020205e-62 | -8.615850e-47 |
| Msa0671640 | Msa0692090 | 0.828497 | 8.700169e-55 | -8.615850e-47 |
| Msa0678620 | Msa0692090 | 0.813701 | 2.240102e-51 | -8.615850e-47 |
| Msa0683690 | Msa0692090 | 0.804930 | 1.705295e-49 | -8.615850e-47 |
| Msa0685080 | Msa0692090 | 0.804535 | 2.062070e-49 | -8.615850e-47 |
| Msa0692090 | Msa0702020 | -0.810723 | 1.000061e-50 | -8.615850e-47 |
| Msa0692090 | Msa0705520 | 0.809179 | 2.150730e-50 | -8.615850e-47 |
| Msa0692090 | Msa0708870 | -0.801939 | 7.104804e-49 | -8.615850e-47 |
| Msa0692090 | Msa0711260 | 0.808393 | 3.166430e-50 | -8.615850e-47 |
| Msa0692090 | Msa0717540 | -0.800134 | 1.661751e-48 | -8.615850e-47 |
| Msa0692090 | Msa0727480 | 0.810644 | 1.040648e-50 | -8.615850e-47 |
| Msa0692090 | Msa0751960 | 0.805307 | 1.422183e-49 | -8.615850e-47 |
| Msa0692090 | Msa0754190 | -0.802673 | 5.018755e-49 | -8.615850e-47 |
| Msa0692090 | Msa0754530 | 0.803059 | 4.177103e-49 | -8.615850e-47 |
| Msa0692090 | Msa0757120 | 0.810240 | 1.271600e-50 | -8.615850e-47 |
| Msa0692090 | Msa0768670 | 0.832582 | 8.707486e-56 | -8.615850e-47 |
| Msa0692090 | Msa0768720 | 0.824465 | 7.955733e-54 | -8.615850e-47 |
| Msa0692090 | Msa0782590 | 0.803576 | 3.264035e-49 | -8.615850e-47 |
| Msa0692090 | Msa0787860 | 0.812678 | 3.756460e-51 | -8.615850e-47 |
| Msa0692090 | Msa0789220 | 0.803095 | 4.106018e-49 | -8.615850e-47 |
| Msa0692090 | Msa0804170 | 0.814142 | 1.791204e-51 | -8.615850e-47 |
| Msa0692090 | Msa0806930 | 0.831572 | 1.547072e-55 | -8.615850e-47 |
| Msa0692090 | Msa0814160 | 0.839472 | 1.552982e-57 | -8.615850e-47 |
| Msa0692090 | Msa0814230 | 0.800026 | 1.747778e-48 | -8.615850e-47 |
| Msa0692090 | Msa0816140 | 0.810016 | 1.421394e-50 | -8.615850e-47 |
| Msa0692090 | Msa0822410 | 0.827530 | 1.487118e-54 | -8.615850e-47 |
| Msa0692090 | Msa0823380 | 0.804246 | 2.368005e-49 | -8.615850e-47 |
| Msa0692090 | Msa0824850 | 0.812684 | 3.745787e-51 | -8.615850e-47 |
| Msa0692090 | Msa0831890 | 0.835196 | 1.931588e-56 | -8.615850e-47 |
| Msa0692090 | Msa0854840 | 0.812841 | 3.461307e-51 | -8.615850e-47 |
| Msa0692090 | Msa0861730 | 0.843667 | 1.217037e-58 | -8.615850e-47 |
| Msa0692090 | Msa0863840 | 0.801543 | 8.566808e-49 | -8.615850e-47 |
| Msa0692090 | Msa0863860 | 0.810933 | 9.006737e-51 | -8.615850e-47 |
| Msa0692090 | Msa0864160 | 0.823447 | 1.378655e-53 | -8.615850e-47 |
| Msa0692090 | Msa0893840 | 0.816582 | 5.135298e-52 | -8.615850e-47 |
| Msa0692090 | Msa0896920 | 0.836625 | 8.384821e-57 | -8.615850e-47 |
| Msa0692090 | Msa0896950 | 0.809951 | 1.467811e-50 | -8.615850e-47 |
| Msa0692090 | Msa0910830 | 0.804240 | 2.375582e-49 | -8.615850e-47 |
| Msa0692090 | Msa0913550 | 0.833931 | 4.016263e-56 | -8.615850e-47 |
| Msa0692090 | Msa0921180 | 0.825527 | 4.465039e-54 | -8.615850e-47 |
| Msa0692090 | Msa0932140 | 0.801351 | 9.382868e-49 | -8.615850e-47 |
| Msa0692090 | Msa0932150 | 0.800273 | 1.556922e-48 | -8.615850e-47 |
| Msa0692090 | Msa0932930 | 0.804016 | 2.644664e-49 | -8.615850e-47 |
| Msa0692090 | Msa0933580 | 0.800770 | 1.232963e-48 | -8.615850e-47 |
| Msa0692090 | Msa0933610 | 0.804475 | 2.122048e-49 | -8.615850e-47 |
| Msa0692090 | Msa0946010 | 0.822547 | 2.235092e-53 | -8.615850e-47 |
| Msa0692090 | Msa0946310 | 0.812996 | 3.200832e-51 | -8.615850e-47 |
| Msa0692090 | Msa0951150 | 0.844779 | 6.118881e-59 | -8.615850e-47 |
| Msa0692090 | Msa0959700 | 0.813022 | 3.159064e-51 | -8.615850e-47 |
| Msa0692090 | Msa0967900 | -0.810222 | 1.283426e-50 | -8.615850e-47 |
| Msa0692090 | Msa0987640 | 0.829422 | 5.192654e-55 | -8.615850e-47 |
| Msa0692090 | Msa0993450 | 0.808716 | 2.700999e-50 | -8.615850e-47 |
| Msa0692090 | Msa0996980 | 0.824768 | 6.747835e-54 | -8.615850e-47 |
| Msa0692090 | Msa1006170 | 0.825623 | 4.236582e-54 | -8.615850e-47 |
| Msa0692090 | Msa1006220 | 0.805263 | 1.452321e-49 | -8.615850e-47 |
| Msa0692090 | Msa1018590 | 0.812797 | 3.538210e-51 | -8.615850e-47 |
| Msa0692090 | Msa1021620 | 0.826594 | 2.489580e-54 | -8.615850e-47 |
| Msa0692090 | Msa1022510 | 0.814812 | 1.272974e-51 | -8.615850e-47 |
| Msa0692090 | Msa1024350 | 0.809816 | 1.569350e-50 | -8.615850e-47 |
| Msa0692090 | Msa1030320 | 0.839872 | 1.222137e-57 | -8.615850e-47 |
| Msa0692090 | Msa1037530 | 0.813554 | 2.413977e-51 | -8.615850e-47 |
| Msa0692090 | Msa1048350 | 0.823440 | 1.383505e-53 | -8.615850e-47 |
| Msa0692090 | Msa1061670 | 0.827861 | 1.238435e-54 | -8.615850e-47 |
| Msa0692090 | Msa1063210 | 0.813822 | 2.106490e-51 | -8.615850e-47 |
| Msa0692090 | Msa1064940 | 0.824464 | 7.960562e-54 | -8.615850e-47 |
| Msa0692090 | Msa1068080 | 0.826736 | 2.303041e-54 | -8.615850e-47 |
| Msa0692090 | Msa1069350 | 0.822948 | 1.802492e-53 | -8.615850e-47 |
| Msa0692090 | Msa1070630 | -0.805660 | 1.199369e-49 | -8.615850e-47 |
| Msa0692090 | Msa1076830 | 0.811703 | 6.129833e-51 | -8.615850e-47 |
| Msa0692090 | Msa1078090 | 0.802347 | 5.858712e-49 | -8.615850e-47 |
| Msa0692090 | Msa1087370 | 0.818253 | 2.158686e-52 | -8.615850e-47 |
| Msa0692090 | Msa1087380 | 0.829862 | 4.058718e-55 | -8.615850e-47 |
| Msa0692090 | Msa1100030 | 0.812996 | 3.200039e-51 | -8.615850e-47 |
| Msa0692090 | Msa1104960 | 0.806128 | 9.559419e-50 | -8.615850e-47 |
| Msa0692090 | Msa1106680 | 0.828974 | 6.671916e-55 | -8.615850e-47 |
| Msa0692090 | Msa1106960 | 0.823093 | 1.667637e-53 | -8.615850e-47 |
| Msa0692090 | Msa1109880 | 0.817609 | 3.018090e-52 | -8.615850e-47 |
| Msa0692090 | Msa1109890 | 0.830785 | 2.415165e-55 | -8.615850e-47 |
| Msa0692090 | Msa1120680 | 0.842057 | 3.262784e-58 | -8.615850e-47 |
| Msa0692090 | Msa1128230 | -0.802400 | 5.711161e-49 | -8.615850e-47 |
| Msa0692090 | Msa1147030 | 0.820042 | 8.453440e-53 | -8.615850e-47 |
| Msa0692090 | Msa1148210 | 0.809473 | 1.859304e-50 | -8.615850e-47 |
| Msa0692090 | Msa1149020 | 0.801987 | 6.946575e-49 | -8.615850e-47 |
| Msa0692090 | Msa1156240 | 0.834844 | 2.369675e-56 | -8.615850e-47 |
| Msa0692090 | Msa1157210 | 0.839142 | 1.891541e-57 | -8.615850e-47 |
| Msa0692090 | Msa1158450 | -0.800134 | 1.661998e-48 | -8.615850e-47 |
| Msa0692090 | Msa1165460 | 0.804156 | 2.472701e-49 | -8.615850e-47 |
| Msa0692090 | Msa1170320 | 0.810576 | 1.076138e-50 | -8.615850e-47 |
| Msa0692090 | Msa1170340 | 0.813667 | 2.279025e-51 | -8.615850e-47 |
| Msa0692090 | Msa1181090 | 0.819316 | 1.238159e-52 | -8.615850e-47 |
| Msa0692090 | Msa1186340 | 0.811961 | 5.388234e-51 | -8.615850e-47 |
| Msa0692090 | Msa1188080 | 0.805332 | 1.405044e-49 | -8.615850e-47 |
| Msa0692090 | Msa1190350 | -0.800390 | 1.474158e-48 | -8.615850e-47 |
| Msa0692090 | Msa1225850 | 0.802191 | 6.307185e-49 | -8.615850e-47 |
| Msa0692090 | Msa1228600 | -0.804239 | 2.376815e-49 | -8.615850e-47 |
| Msa0692090 | Msa1233630 | 0.814156 | 1.777931e-51 | -8.615850e-47 |
| Msa0692090 | Msa1245530 | 0.817050 | 4.031831e-52 | -8.615850e-47 |
| Msa0692090 | Msa1267990 | 0.812123 | 4.966844e-51 | -8.615850e-47 |
| Msa0692090 | Msa1279310 | -0.814787 | 1.289686e-51 | -8.615850e-47 |
| Msa0692090 | Msa1296870 | 0.810092 | 1.368772e-50 | -8.615850e-47 |
| Msa0692090 | Msa1300590 | 0.807321 | 5.351956e-50 | -8.615850e-47 |
| Msa0692090 | Msa1300610 | 0.822900 | 1.849516e-53 | -8.615850e-47 |
| Msa0692090 | Msa1313840 | 0.820434 | 6.873162e-53 | -8.615850e-47 |
| Msa0692090 | Msa1314030 | 0.800250 | 1.574069e-48 | -8.615850e-47 |
| Msa0692090 | Msa1321970 | 0.813310 | 2.730727e-51 | -8.615850e-47 |
| Msa0692090 | Msa1322500 | 0.804861 | 1.762616e-49 | -8.615850e-47 |
| Msa0692090 | Msa1323080 | 0.820035 | 8.482440e-53 | -8.615850e-47 |
| Msa0692090 | Msa1323120 | 0.843675 | 1.211366e-58 | -8.615850e-47 |
| Msa0692090 | Msa1327690 | -0.802159 | 6.402498e-49 | -8.615850e-47 |
| Msa0692090 | Msa1329740 | 0.811825 | 5.768700e-51 | -8.615850e-47 |
| Msa0692090 | Msa1342360 | -0.802415 | 5.672691e-49 | -8.615850e-47 |
| Msa0692090 | Msa1345390 | 0.803582 | 3.254255e-49 | -8.615850e-47 |
| Msa0692090 | Msa1348860 | -0.807226 | 5.606554e-50 | -8.615850e-47 |
| Msa0692090 | Msa1350870 | 0.807771 | 4.294791e-50 | -8.615850e-47 |
| Msa0692090 | Msa1355340 | 0.817241 | 3.651950e-52 | -8.615850e-47 |
| Msa0692090 | Msa1357860 | 0.826248 | 3.009931e-54 | -8.615850e-47 |
| Msa0692090 | Msa1368800 | -0.820470 | 6.744141e-53 | -8.615850e-47 |
| Msa0692090 | Msa1369220 | -0.801367 | 9.309403e-49 | -8.615850e-47 |
| Msa0692090 | Msa1376070 | 0.811569 | 6.556591e-51 | -8.615850e-47 |
| Msa0692090 | Msa1380740 | 0.847714 | 9.711481e-60 | -8.615850e-47 |
| Msa0692090 | Msa1384970 | -0.800015 | 1.757110e-48 | -8.615850e-47 |
| Msa0692090 | Msa1406840 | 0.807405 | 5.137373e-50 | -8.615850e-47 |
| Msa0692090 | Msa1407670 | 0.814349 | 1.612228e-51 | -8.615850e-47 |
| Msa0692090 | Msa1409600 | 0.845847 | 3.144795e-59 | -8.615850e-47 |
| Msa0692090 | Msa1411550 | 0.841247 | 5.334854e-58 | -8.615850e-47 |
| Msa0692090 | Msa1412360 | 0.802994 | 4.307735e-49 | -8.615850e-47 |
| Msa0692090 | Msa1413020 | 0.814107 | 1.823277e-51 | -8.615850e-47 |
| Msa0692090 | Msa1445900 | 0.816319 | 5.880913e-52 | -8.615850e-47 |
| Msa0692090 | Msa1446090 | 0.811826 | 5.764615e-51 | -8.615850e-47 |
| Msa0692090 | Msa1449770 | 0.818270 | 2.139069e-52 | -8.615850e-47 |
| Msa0692090 | Msa1453650 | 0.804772 | 1.840341e-49 | -8.615850e-47 |
| Msa0692090 | Msa1455360 | 0.811360 | 7.280849e-51 | -8.615850e-47 |
| Msa0692090 | Msa1459610 | 0.828405 | 9.158574e-55 | -8.615850e-47 |
| Msa0692090 | Msa1459680 | -0.809865 | 1.531680e-50 | -8.615850e-47 |
| Msa0123530 | Msa0692090 | 0.824114 | 9.620138e-54 | -8.615850e-47 |
| Msa0134570 | Msa0692090 | 0.800128 | 1.666202e-48 | -8.615850e-47 |
| Msa0140270 | Msa0692090 | 0.822704 | 2.054031e-53 | -8.615850e-47 |
| Msa0142560 | Msa0692090 | 0.821390 | 4.141931e-53 | -8.615850e-47 |
| Msa0150910 | Msa0692090 | 0.863204 | 2.942284e-64 | -8.615850e-47 |
| Msa0150920 | Msa0692090 | 0.850835 | 1.313602e-60 | -8.615850e-47 |
| Msa0160580 | Msa0692090 | 0.804650 | 1.951377e-49 | -8.615850e-47 |
| Msa0163340 | Msa0692090 | 0.825781 | 3.886439e-54 | -8.615850e-47 |
| Msa0168010 | Msa0692090 | 0.845119 | 4.953356e-59 | -8.615850e-47 |
| Msa0189150 | Msa0692090 | -0.806596 | 7.616901e-50 | -8.615850e-47 |
| Msa0190670 | Msa0692090 | 0.842212 | 2.968036e-58 | -8.615850e-47 |
| Msa0190890 | Msa0692090 | 0.837967 | 3.802980e-57 | -8.615850e-47 |
| Msa0195190 | Msa0692090 | 0.805077 | 1.588726e-49 | -8.615850e-47 |
| Msa0195580 | Msa0692090 | 0.830177 | 3.401480e-55 | -8.615850e-47 |
| Msa0196260 | Msa0692090 | 0.828384 | 9.261578e-55 | -8.615850e-47 |
| Msa0207640 | Msa0692090 | 0.807125 | 5.888474e-50 | -8.615850e-47 |
| Msa0209060 | Msa0692090 | 0.808684 | 2.744707e-50 | -8.615850e-47 |
| Msa0225070 | Msa0692090 | -0.808615 | 2.839241e-50 | -8.615850e-47 |
| Msa0233210 | Msa0692090 | 0.827075 | 1.911174e-54 | -8.615850e-47 |
| Msa0237380 | Msa0692090 | 0.801172 | 1.020748e-48 | -8.615850e-47 |
| Msa0238110 | Msa0692090 | 0.809392 | 1.935953e-50 | -8.615850e-47 |
| Msa0238140 | Msa0692090 | 0.808219 | 3.447892e-50 | -8.615850e-47 |
| Msa0366510 | Msa0692090 | 0.809256 | 2.070265e-50 | -8.615850e-47 |
| Msa0374040 | Msa0692090 | 0.849192 | 3.786764e-60 | -8.615850e-47 |
| Msa0380680 | Msa0692090 | 0.816760 | 4.682896e-52 | -8.615850e-47 |
| Msa0384150 | Msa0692090 | -0.812469 | 4.172884e-51 | -8.615850e-47 |
| Msa0396730 | Msa0692090 | 0.811059 | 8.462129e-51 | -8.615850e-47 |
| Msa0396790 | Msa0692090 | 0.808927 | 2.434863e-50 | -8.615850e-47 |
| Msa0414480 | Msa0692090 | 0.832289 | 1.028882e-55 | -8.615850e-47 |
| Msa0444250 | Msa0692090 | 0.829124 | 6.136021e-55 | -8.615850e-47 |
| Msa0444400 | Msa0692090 | 0.824002 | 1.021664e-53 | -8.615850e-47 |
| Msa0456450 | Msa0692090 | -0.801787 | 7.637546e-49 | -8.615850e-47 |
| Msa0457070 | Msa0692090 | -0.803363 | 3.613062e-49 | -8.615850e-47 |
| Msa0464310 | Msa0692090 | 0.820248 | 7.580913e-53 | -8.615850e-47 |
| Msa0469450 | Msa0692090 | 0.817272 | 3.593265e-52 | -8.615850e-47 |
| Msa0242830 | Msa0692090 | 0.810306 | 1.231096e-50 | -8.615850e-47 |
| Msa0258010 | Msa0692090 | 0.813172 | 2.927976e-51 | -8.615850e-47 |
| Msa0261400 | Msa0692090 | 0.812847 | 3.450006e-51 | -8.615850e-47 |
| Msa0272210 | Msa0692090 | 0.835039 | 2.116028e-56 | -8.615850e-47 |
| Msa0274250 | Msa0692090 | 0.827589 | 1.438926e-54 | -8.615850e-47 |
| Msa0274260 | Msa0692090 | 0.821334 | 4.268040e-53 | -8.615850e-47 |
| Msa0278950 | Msa0692090 | 0.818151 | 2.276288e-52 | -8.615850e-47 |
| Msa0281190 | Msa0692090 | 0.855666 | 5.412556e-62 | -8.615850e-47 |
| Msa0288540 | Msa0692090 | 0.813646 | 2.303574e-51 | -8.615850e-47 |
| Msa0290800 | Msa0692090 | 0.809340 | 1.986446e-50 | -8.615850e-47 |
| Msa0311540 | Msa0692090 | 0.828991 | 6.606955e-55 | -8.615850e-47 |
| Msa0320150 | Msa0692090 | 0.802131 | 6.487926e-49 | -8.615850e-47 |
| Msa0326770 | Msa0692090 | 0.824242 | 8.972912e-54 | -8.615850e-47 |
| Msa0328090 | Msa0692090 | 0.814810 | 1.274621e-51 | -8.615850e-47 |
| Msa0328870 | Msa0692090 | 0.808010 | 3.821661e-50 | -8.615850e-47 |
| Msa0335340 | Msa0692090 | 0.807428 | 5.079424e-50 | -8.615850e-47 |
| Msa0349930 | Msa0692090 | 0.813384 | 2.630013e-51 | -8.615850e-47 |
| Msa0354540 | Msa0692090 | 0.809629 | 1.721973e-50 | -8.615850e-47 |
| Msa0361700 | Msa0692090 | 0.813109 | 3.023172e-51 | -8.615850e-47 |
| Msa0484410 | Msa0692090 | 0.801829 | 7.484347e-49 | -8.615850e-47 |
| Msa0486850 | Msa0692090 | -0.801234 | 9.914590e-49 | -8.615850e-47 |
| Msa0490060 | Msa0692090 | 0.802774 | 4.783430e-49 | -8.615850e-47 |
| Msa0491800 | Msa0692090 | 0.801808 | 7.561653e-49 | -8.615850e-47 |
| Msa0491830 | Msa0692090 | 0.830684 | 2.556821e-55 | -8.615850e-47 |
| Msa0491950 | Msa0692090 | 0.809783 | 1.595139e-50 | -8.615850e-47 |
| Msa0496070 | Msa0692090 | 0.809327 | 1.998798e-50 | -8.615850e-47 |
| Msa0502940 | Msa0692090 | 0.807065 | 6.062892e-50 | -8.615850e-47 |
| Msa0515130 | Msa0692090 | 0.835151 | 1.982981e-56 | -8.615850e-47 |
| Msa0515150 | Msa0692090 | 0.824117 | 9.601752e-54 | -8.615850e-47 |
| Msa0515400 | Msa0692090 | -0.802024 | 6.826466e-49 | -8.615850e-47 |
| Msa0530990 | Msa0692090 | 0.816359 | 5.760867e-52 | -8.615850e-47 |
| Msa0535570 | Msa0692090 | 0.864867 | 8.923283e-65 | -8.615850e-47 |
| Msa0538440 | Msa0692090 | 0.804102 | 2.537851e-49 | -8.615850e-47 |
| Msa0538450 | Msa0692090 | 0.803655 | 3.142232e-49 | -8.615850e-47 |
| Msa0538520 | Msa0692090 | 0.802357 | 5.830982e-49 | -8.615850e-47 |
| Msa0543740 | Msa0692090 | 0.808547 | 2.935850e-50 | -8.615850e-47 |
| Msa0550770 | Msa0692090 | -0.802573 | 5.263031e-49 | -8.615850e-47 |
| Msa0554660 | Msa0692090 | 0.814037 | 1.888795e-51 | -8.615850e-47 |
| Msa0555920 | Msa0692090 | 0.947665 | 4.321084e-106 | -8.615850e-47 |
| Msa0560010 | Msa0692090 | -0.803529 | 3.338333e-49 | -8.615850e-47 |
| Msa0565150 | Msa0692090 | -0.813631 | 2.321655e-51 | -8.615850e-47 |
| Msa0565530 | Msa0692090 | -0.805823 | 1.108400e-49 | -8.615850e-47 |
| Msa0580100 | Msa0692090 | 0.821690 | 3.530933e-53 | -8.615850e-47 |
| Msa0580210 | Msa0692090 | 0.803537 | 3.324460e-49 | -8.615850e-47 |
| Msa0587870 | Msa0692090 | 0.805226 | 1.478418e-49 | -8.615850e-47 |
| Msa0591490 | Msa0692090 | 0.865728 | 4.782924e-65 | -8.615850e-47 |
| Msa0594330 | Msa0692090 | 0.806492 | 8.011004e-50 | -8.615850e-47 |
| Msa0599600 | Msa0692090 | 0.809819 | 1.566977e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0692090 | MtrunA17_Chr4g0042101 | 97.450 | 353 | 8 | 1 | 1 | 353 | 5 | 356 | 0.0 | 714 |
| Msa0692090 | MtrunA17_Chr1g0155431 | 42.690 | 342 | 161 | 8 | 21 | 351 | 9 | 326 | 4.76e-92 | 278 |
| Msa0692090 | MtrunA17_Chr1g0155411 | 41.570 | 344 | 166 | 8 | 21 | 353 | 9 | 328 | 3.03e-86 | 264 |
| Msa0692090 | MtrunA17_Chr7g0245741 | 38.529 | 340 | 183 | 8 | 18 | 350 | 6 | 326 | 7.92e-76 | 236 |
| Msa0692090 | MtrunA17_Chr4g0048961 | 38.485 | 330 | 183 | 6 | 19 | 341 | 13 | 329 | 3.89e-73 | 230 |
| Msa0692090 | MtrunA17_Chr7g0245731 | 37.353 | 340 | 187 | 7 | 18 | 350 | 56 | 376 | 3.64e-72 | 229 |
| Msa0692090 | MtrunA17_Chr7g0245641 | 37.243 | 341 | 189 | 7 | 18 | 350 | 43 | 366 | 8.57e-72 | 228 |
| Msa0692090 | MtrunA17_Chr7g0245691 | 37.537 | 341 | 189 | 9 | 18 | 350 | 6 | 330 | 1.46e-71 | 226 |
| Msa0692090 | MtrunA17_Chr7g0245671 | 37.941 | 340 | 188 | 9 | 18 | 350 | 6 | 329 | 1.57e-69 | 220 |
| Msa0692090 | MtrunA17_Chr7g0245631 | 34.706 | 340 | 196 | 7 | 18 | 350 | 6 | 326 | 7.02e-68 | 216 |
| Msa0692090 | MtrunA17_Chr8g0364051 | 39.697 | 330 | 162 | 7 | 21 | 338 | 9 | 313 | 1.46e-63 | 205 |
| Msa0692090 | MtrunA17_Chr4g0010991 | 37.353 | 340 | 184 | 8 | 21 | 350 | 9 | 329 | 2.51e-62 | 202 |
| Msa0692090 | MtrunA17_Chr8g0363831 | 39.394 | 330 | 165 | 8 | 21 | 341 | 10 | 313 | 2.53e-62 | 202 |
| Msa0692090 | MtrunA17_Chr2g0331211 | 35.207 | 338 | 197 | 9 | 19 | 353 | 4 | 322 | 2.62e-60 | 197 |
| Msa0692090 | MtrunA17_Chr4g0039311 | 40.367 | 327 | 163 | 10 | 21 | 337 | 12 | 316 | 8.00e-60 | 195 |
| Msa0692090 | MtrunA17_Chr5g0423551 | 37.500 | 336 | 187 | 8 | 19 | 350 | 3 | 319 | 9.32e-60 | 195 |
| Msa0692090 | MtrunA17_Chr3g0077221 | 38.110 | 328 | 173 | 10 | 21 | 341 | 11 | 315 | 4.32e-59 | 193 |
| Msa0692090 | MtrunA17_Chr4g0039321 | 39.571 | 326 | 167 | 9 | 21 | 337 | 10 | 314 | 6.73e-59 | 193 |
| Msa0692090 | MtrunA17_Chr7g0245711 | 35.738 | 305 | 173 | 6 | 50 | 350 | 3 | 288 | 7.70e-59 | 191 |
| Msa0692090 | MtrunA17_Chr3g0077231 | 37.231 | 325 | 180 | 9 | 21 | 341 | 7 | 311 | 5.80e-58 | 190 |
| Msa0692090 | MtrunA17_Chr5g0431311 | 37.423 | 326 | 178 | 10 | 21 | 341 | 6 | 310 | 5.23e-51 | 172 |
| Msa0692090 | MtrunA17_Chr4g0002661 | 35.503 | 338 | 190 | 10 | 19 | 352 | 12 | 325 | 6.40e-50 | 169 |
| Msa0692090 | MtrunA17_Chr3g0106111 | 34.006 | 347 | 179 | 12 | 21 | 350 | 6 | 319 | 5.01e-47 | 162 |
| Msa0692090 | MtrunA17_Chr2g0333781 | 35.522 | 335 | 185 | 11 | 21 | 350 | 21 | 329 | 3.67e-46 | 160 |
| Msa0692090 | MtrunA17_Chr4g0001321 | 34.821 | 336 | 188 | 11 | 21 | 351 | 18 | 327 | 2.71e-45 | 158 |
| Msa0692090 | MtrunA17_Chr2g0281991 | 31.642 | 335 | 211 | 7 | 19 | 343 | 7 | 333 | 9.55e-45 | 156 |
| Msa0692090 | MtrunA17_Chr7g0275521 | 31.503 | 346 | 212 | 12 | 19 | 350 | 6 | 340 | 2.40e-43 | 153 |
| Msa0692090 | MtrunA17_Chr4g0002961 | 34.821 | 336 | 195 | 10 | 19 | 352 | 12 | 325 | 1.43e-42 | 150 |
| Msa0692090 | MtrunA17_Chr2g0282001 | 30.769 | 338 | 210 | 8 | 19 | 343 | 6 | 332 | 3.35e-42 | 150 |
| Msa0692090 | MtrunA17_Chr2g0282011 | 30.702 | 342 | 205 | 8 | 19 | 343 | 7 | 333 | 1.12e-37 | 138 |
| Msa0692090 | MtrunA17_Chr2g0291541 | 28.869 | 336 | 213 | 11 | 21 | 350 | 11 | 326 | 1.55e-34 | 129 |
| Msa0692090 | MtrunA17_Chr5g0411071 | 27.937 | 315 | 192 | 13 | 21 | 330 | 13 | 297 | 1.46e-23 | 99.0 |
| Msa0692090 | MtrunA17_Chr6g0450211 | 26.119 | 268 | 166 | 9 | 21 | 279 | 56 | 300 | 9.60e-19 | 86.3 |
| Msa0692090 | MtrunA17_Chr3g0133771 | 23.507 | 268 | 174 | 9 | 19 | 286 | 3 | 239 | 8.68e-13 | 68.6 |
| Msa0692090 | MtrunA17_Chr3g0080551 | 35.345 | 116 | 71 | 2 | 115 | 229 | 13 | 125 | 1.56e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0692090 | AT4G27250.1 | 59.451 | 328 | 130 | 3 | 17 | 341 | 10 | 337 | 3.27e-138 | 397 |
| Msa0692090 | AT4G27250.2 | 58.232 | 328 | 124 | 4 | 17 | 341 | 10 | 327 | 5.47e-132 | 380 |
| Msa0692090 | AT5G42800.1 | 41.543 | 337 | 172 | 7 | 21 | 351 | 9 | 326 | 1.01e-86 | 266 |
| Msa0692090 | AT4G35420.1 | 39.528 | 339 | 182 | 8 | 18 | 353 | 6 | 324 | 1.78e-72 | 228 |
| Msa0692090 | AT1G09510.1 | 37.920 | 327 | 177 | 10 | 21 | 342 | 9 | 314 | 1.31e-64 | 208 |
| Msa0692090 | AT1G61720.1 | 37.195 | 328 | 194 | 4 | 17 | 341 | 10 | 328 | 7.91e-64 | 206 |
| Msa0692090 | AT1G51410.1 | 37.425 | 334 | 185 | 7 | 21 | 350 | 10 | 323 | 1.39e-61 | 200 |
| Msa0692090 | AT1G66800.1 | 36.145 | 332 | 182 | 8 | 21 | 345 | 9 | 317 | 5.82e-60 | 196 |
| Msa0692090 | AT1G09490.1 | 35.241 | 332 | 189 | 8 | 21 | 345 | 9 | 321 | 1.31e-59 | 195 |
| Msa0692090 | AT5G19440.1 | 37.994 | 329 | 168 | 10 | 21 | 337 | 11 | 315 | 1.30e-58 | 192 |
| Msa0692090 | AT2G45400.1 | 36.047 | 344 | 194 | 7 | 17 | 350 | 37 | 364 | 5.88e-58 | 192 |
| Msa0692090 | AT1G09480.2 | 40.230 | 261 | 134 | 6 | 21 | 278 | 9 | 250 | 1.11e-55 | 185 |
| Msa0692090 | AT1G09480.1 | 40.230 | 261 | 134 | 6 | 21 | 278 | 56 | 297 | 2.12e-55 | 186 |
| Msa0692090 | AT1G09500.3 | 36.879 | 282 | 157 | 6 | 21 | 299 | 9 | 272 | 5.31e-55 | 182 |
| Msa0692090 | AT1G09500.1 | 34.251 | 327 | 192 | 7 | 21 | 342 | 9 | 317 | 5.52e-55 | 183 |
| Msa0692090 | AT5G58490.1 | 38.209 | 335 | 181 | 11 | 21 | 350 | 10 | 323 | 1.28e-53 | 179 |
| Msa0692090 | AT1G68540.1 | 34.897 | 341 | 193 | 10 | 18 | 350 | 2 | 321 | 5.25e-53 | 178 |
| Msa0692090 | AT2G33590.1 | 35.650 | 331 | 186 | 10 | 15 | 341 | 4 | 311 | 2.07e-51 | 174 |
| Msa0692090 | AT2G45400.2 | 35.640 | 289 | 163 | 5 | 17 | 297 | 37 | 310 | 9.95e-50 | 169 |
| Msa0692090 | AT2G02400.1 | 33.234 | 337 | 193 | 10 | 21 | 350 | 7 | 318 | 1.15e-49 | 169 |
| Msa0692090 | AT1G25460.1 | 35.312 | 337 | 195 | 9 | 18 | 350 | 2 | 319 | 4.68e-49 | 167 |
| Msa0692090 | AT2G33600.1 | 37.278 | 338 | 173 | 12 | 14 | 341 | 3 | 311 | 5.84e-48 | 165 |
| Msa0692090 | AT2G45400.3 | 34.295 | 312 | 184 | 6 | 44 | 350 | 12 | 307 | 1.10e-45 | 158 |
| Msa0692090 | AT1G76470.1 | 33.234 | 337 | 202 | 8 | 19 | 351 | 6 | 323 | 7.17e-45 | 157 |
| Msa0692090 | AT1G09490.2 | 31.270 | 307 | 188 | 7 | 43 | 345 | 3 | 290 | 9.29e-45 | 155 |
| Msa0692090 | AT1G15950.3 | 32.537 | 335 | 195 | 10 | 21 | 350 | 14 | 322 | 8.42e-44 | 154 |
| Msa0692090 | AT1G15950.1 | 32.537 | 335 | 195 | 10 | 21 | 350 | 14 | 322 | 8.42e-44 | 154 |
| Msa0692090 | AT1G80820.1 | 33.036 | 336 | 194 | 11 | 21 | 351 | 9 | 318 | 1.07e-43 | 154 |
| Msa0692090 | AT1G15950.2 | 33.439 | 314 | 179 | 9 | 21 | 329 | 14 | 302 | 7.96e-43 | 152 |
| Msa0692090 | AT1G15950.4 | 33.904 | 292 | 164 | 8 | 21 | 307 | 14 | 281 | 5.80e-40 | 143 |
| Msa0692090 | AT1G15950.6 | 34.266 | 286 | 159 | 8 | 21 | 301 | 14 | 275 | 8.54e-40 | 142 |
| Msa0692090 | AT1G15950.5 | 34.266 | 286 | 159 | 8 | 21 | 301 | 14 | 275 | 1.17e-39 | 142 |
| Msa0692090 | AT1G09500.2 | 30.847 | 295 | 184 | 6 | 50 | 342 | 7 | 283 | 2.37e-39 | 141 |
| Msa0692090 | AT2G45400.4 | 37.611 | 226 | 125 | 4 | 17 | 234 | 37 | 254 | 4.05e-38 | 137 |
| Msa0692090 | AT1G80820.2 | 34.615 | 286 | 158 | 9 | 21 | 301 | 9 | 270 | 3.19e-37 | 135 |
| Msa0692090 | AT2G23910.2 | 27.547 | 265 | 164 | 7 | 21 | 282 | 11 | 250 | 1.15e-26 | 107 |
| Msa0692090 | AT2G23910.3 | 27.547 | 265 | 164 | 7 | 21 | 282 | 11 | 250 | 1.32e-26 | 107 |
| Msa0692090 | AT2G23910.1 | 27.547 | 265 | 164 | 7 | 21 | 282 | 11 | 250 | 2.49e-26 | 107 |
| Msa0692090 | AT4G30470.1 | 28.302 | 265 | 161 | 8 | 21 | 282 | 11 | 249 | 8.05e-24 | 100 |
| Msa0692090 | AT1G68540.2 | 29.694 | 229 | 141 | 6 | 127 | 350 | 1 | 214 | 2.45e-21 | 91.3 |
| Msa0692090 | AT1G15950.7 | 29.289 | 239 | 151 | 8 | 115 | 350 | 1 | 224 | 3.62e-19 | 85.9 |
| Msa0692090 | AT2G23910.4 | 26.606 | 218 | 135 | 6 | 65 | 282 | 24 | 216 | 2.86e-17 | 81.3 |
| Msa0692090 | AT4G33360.2 | 22.939 | 279 | 181 | 9 | 19 | 294 | 14 | 261 | 1.08e-16 | 80.1 |
| Msa0692090 | AT4G33360.3 | 22.939 | 279 | 181 | 9 | 19 | 294 | 2 | 249 | 1.32e-16 | 80.1 |
| Msa0692090 | AT4G33360.1 | 22.939 | 279 | 181 | 9 | 19 | 294 | 14 | 261 | 1.36e-16 | 80.1 |
| Msa0692090 | AT5G14700.1 | 26.937 | 271 | 165 | 10 | 21 | 279 | 56 | 305 | 3.12e-15 | 76.6 |
| Msa0692090 | AT5G14700.2 | 26.244 | 221 | 145 | 7 | 21 | 232 | 56 | 267 | 8.87e-12 | 65.5 |
Find 68 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAAATTTGCTAAAGATAA+TGG | 0.183537 | 4_4:-60426303 | Msa0692090:CDS |
| GCAAGATTTGAGCAGGTTTA+TGG | 0.190488 | 4_4:+60426603 | None:intergenic |
| CTCAAAGAAGCTAAAAGATT+TGG | 0.192018 | 4_4:-60425406 | Msa0692090:CDS |
| ACACAGTGTCAGTTTGTATT+TGG | 0.230014 | 4_4:+60426476 | None:intergenic |
| ATTATGTGTTGCCTAGATTA+TGG | 0.244579 | 4_4:-60425339 | Msa0692090:CDS |
| GGCACCTGTAACACAATATT+TGG | 0.281952 | 4_4:+60431537 | None:intergenic |
| TTTATGGTTCCTTTGATTGC+AGG | 0.296003 | 4_4:+60426619 | None:intergenic |
| ACTGCCAAATATTGTGTTAC+AGG | 0.302149 | 4_4:-60431541 | Msa0692090:CDS |
| TTAAATTTGCTAAAGATAAT+GGG | 0.324810 | 4_4:-60426302 | Msa0692090:CDS |
| TCAAAGAAGCTAAAAGATTT+GGG | 0.330800 | 4_4:-60425405 | Msa0692090:CDS |
| ACAGGTGCCACAGGGTATAT+TGG | 0.354757 | 4_4:-60431523 | Msa0692090:CDS |
| AGTTGGATTAGAATACTCTT+TGG | 0.355460 | 4_4:+60425571 | None:intergenic |
| TGAAATCCAATTCTGTGAAA+AGG | 0.362071 | 4_4:-60426579 | Msa0692090:CDS |
| CAATGCTCACATATTCTTGA+TGG | 0.364605 | 4_4:-60425669 | Msa0692090:CDS |
| CCACAGGGTATATTGGTTCA+TGG | 0.374216 | 4_4:-60431516 | Msa0692090:CDS |
| AGCTTCGATGAGGCAGTAAA+AGG | 0.376180 | 4_4:-60426855 | Msa0692090:CDS |
| GTTATAACAAGCACTGTTGC+AGG | 0.378815 | 4_4:-60426264 | Msa0692090:CDS |
| TGGCAAGATTCATCAACAAT+AGG | 0.382737 | 4_4:+60426496 | None:intergenic |
| TTTGATGTACTATTTCTTCA+AGG | 0.382990 | 4_4:+60425364 | None:intergenic |
| GAAACAAGAGCTGCCAAGTT+AGG | 0.387233 | 4_4:+60425593 | None:intergenic |
| CGCGCTGATTTGCACGAAGA+AGG | 0.398678 | 4_4:-60426879 | Msa0692090:CDS |
| TAATGGGATTGATCTTGTTT+CGG | 0.400774 | 4_4:-60426286 | Msa0692090:CDS |
| GAGTATTACCTTAGCGTAGT+TGG | 0.404324 | 4_4:+60425554 | None:intergenic |
| GTTCTGCTGTCCTCACTAAC+AGG | 0.415335 | 4_4:-60426204 | Msa0692090:intron |
| GAAATCCAATTCTGTGAAAA+GGG | 0.430378 | 4_4:-60426578 | Msa0692090:CDS |
| TCTGCTGTAAATGCACGAAT+GGG | 0.461394 | 4_4:-60425725 | Msa0692090:CDS |
| CATGCTACTGTCAGAGATCC+TGG | 0.464239 | 4_4:-60431457 | Msa0692090:intron |
| AAGCTGTACACTGCCTAACT+TGG | 0.485427 | 4_4:-60425606 | Msa0692090:CDS |
| TTATGGTTCCTTTGATTGCA+GGG | 0.488008 | 4_4:+60426620 | None:intergenic |
| AAGGTAAATAACCATAATCT+AGG | 0.489051 | 4_4:+60425328 | None:intergenic |
| AGCAGAACTTTAACACTTGA+AGG | 0.492074 | 4_4:+60426219 | None:intergenic |
| CCATTACTTACCCATCCACT+TGG | 0.492651 | 4_4:+60426442 | None:intergenic |
| ATCTGCTGTAAATGCACGAA+TGG | 0.493103 | 4_4:-60425726 | Msa0692090:CDS |
| ATTTCAAGCAAGATTTGAGC+AGG | 0.496756 | 4_4:+60426596 | None:intergenic |
| ACACCTCCTGTCATTGTGGA+AGG | 0.512956 | 4_4:-60426925 | Msa0692090:CDS |
| TATTGTGTTACAGGTGCCAC+AGG | 0.519643 | 4_4:-60431532 | Msa0692090:CDS |
| CTAAAGATAGCAATGGAAAG+TGG | 0.532380 | 4_4:-60426522 | Msa0692090:CDS |
| CACCACCCTTCCACAATGAC+AGG | 0.541255 | 4_4:+60426919 | None:intergenic |
| GTTGAAGCTCTTCTTCAAAG+AGG | 0.555164 | 4_4:-60431490 | Msa0692090:CDS |
| GGAATACACAACCAAGTGGA+TGG | 0.556204 | 4_4:-60426453 | Msa0692090:CDS |
| ATCTCTGACAGTAGCATGAA+CGG | 0.558337 | 4_4:+60431462 | None:intergenic |
| ATAATTGACCCTGCAATCAA+AGG | 0.559331 | 4_4:-60426628 | Msa0692090:CDS |
| AATGGAGGAAGCAATGAGGA+TGG | 0.563316 | 4_4:-60431590 | Msa0692090:CDS |
| ATTACTGCTAAAGATAGCAA+TGG | 0.565154 | 4_4:-60426529 | Msa0692090:CDS |
| CGTTACACCTCCTGTCATTG+TGG | 0.567359 | 4_4:-60426929 | Msa0692090:CDS |
| ATGGAACATGCTAAAGCAGA+AGG | 0.572323 | 4_4:-60425650 | Msa0692090:CDS |
| CACCTCCTGTCATTGTGGAA+GGG | 0.580068 | 4_4:-60426924 | Msa0692090:CDS |
| TTCTTTGAGGAAATTTCAGT+AGG | 0.580180 | 4_4:+60425420 | None:intergenic |
| ATTCTAATCCAACTACGCTA+AGG | 0.591677 | 4_4:-60425562 | Msa0692090:intron |
| GTAACACAATATTTGGCAGT+AGG | 0.604825 | 4_4:+60431544 | None:intergenic |
| TATAAAGTCACCTGTTAGTG+AGG | 0.610455 | 4_4:+60426194 | None:intergenic |
| AAGAAATGGAGGAAGCAATG+AGG | 0.616615 | 4_4:-60431594 | None:intergenic |
| GAATACACAACCAAGTGGAT+GGG | 0.623474 | 4_4:-60426452 | Msa0692090:intron |
| GTTAATGAGAAAGAAAACAT+TGG | 0.627963 | 4_4:-60426789 | Msa0692090:intron |
| AAGACTAGTAGCTAAACAGA+AGG | 0.645126 | 4_4:+60425309 | None:intergenic |
| ATTGCATTGAAGCTGCAACA+TGG | 0.647004 | 4_4:+60426817 | None:intergenic |
| CTCCTGTCATTGTGGAAGGG+TGG | 0.654676 | 4_4:-60426921 | Msa0692090:CDS |
| GAGGCAGTAAAAGGATGTGA+TGG | 0.658885 | 4_4:-60426846 | Msa0692090:CDS |
| CGAAGAAGGAAGCTTCGATG+AGG | 0.670075 | 4_4:-60426865 | Msa0692090:CDS |
| CACCCTTCCACAATGACAGG+AGG | 0.673181 | 4_4:+60426922 | None:intergenic |
| AACATGCTAAAGCAGAAGGT+AGG | 0.675020 | 4_4:-60425646 | Msa0692090:CDS |
| AAATACAAACTGACACTGTG+TGG | 0.677088 | 4_4:-60426474 | Msa0692090:CDS |
| CTGCTGTAAATGCACGAATG+GGG | 0.681829 | 4_4:-60425724 | Msa0692090:CDS |
| GTGTGGAATACACAACCAAG+TGG | 0.719552 | 4_4:-60426457 | Msa0692090:CDS |
| CTTCTTCGTGCAAATCAGCG+CGG | 0.720406 | 4_4:+60426880 | None:intergenic |
| ATTGTGTTACAGGTGCCACA+GGG | 0.721235 | 4_4:-60431531 | Msa0692090:CDS |
| GAAGAGTCAGAAATATGACA+AGG | 0.727881 | 4_4:-60425445 | Msa0692090:CDS |
| CCATGAACCAATATACCCTG+TGG | 0.749348 | 4_4:+60431516 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATGATAAAATATAATCAA+CGG | - | chr4_4:60425819-60425838 | Msa0692090:intron | 10.0% |
| !!! | TCTTAATTTGTATTAATTTT+AGG | - | chr4_4:60426000-60426019 | Msa0692090:intron | 10.0% |
| !!! | CTTAATTTGTATTAATTTTA+GGG | - | chr4_4:60426001-60426020 | Msa0692090:intron | 10.0% |
| !!! | TAAGTAAATTTTTTTTTGTA+GGG | + | chr4_4:60426104-60426123 | None:intergenic | 10.0% |
| !!! | ATAAGTAAATTTTTTTTTGT+AGG | + | chr4_4:60426105-60426124 | None:intergenic | 10.0% |
| !! | TTAAAAAATTTAAGAGTTTA+AGG | + | chr4_4:60426166-60426185 | None:intergenic | 10.0% |
| !! | AGATATAAGTAATAAAAATA+TGG | - | chr4_4:60426297-60426316 | Msa0692090:CDS | 10.0% |
| !!! | TAGTGTTATTTTTTTTAAAA+AGG | - | chr4_4:60426706-60426725 | Msa0692090:intron | 10.0% |
| !!! | ATATAATTTCTCTTTAAAAT+TGG | - | chr4_4:60427835-60427854 | Msa0692090:intron | 10.0% |
| !! | TTAAAATGTTTAAATTAACT+TGG | - | chr4_4:60428084-60428103 | Msa0692090:intron | 10.0% |
| !! | GAAATAATATTAAAATATGA+TGG | - | chr4_4:60429033-60429052 | Msa0692090:intron | 10.0% |
| !! | ATAAATTAATTTATTTATCG+AGG | + | chr4_4:60429755-60429774 | None:intergenic | 10.0% |
| !! | TTAATACACATATTAAAAAA+AGG | + | chr4_4:60431384-60431403 | None:intergenic | 10.0% |
| !! | TGTTTATTTAATTGATCAAT+AGG | - | chr4_4:60425588-60425607 | Msa0692090:CDS | 15.0% |
| !!! | AACAAATAATTTAGTTTGTT+TGG | + | chr4_4:60425782-60425801 | None:intergenic | 15.0% |
| !!! | ACAAATTAAGACTTTTTTTA+GGG | + | chr4_4:60425991-60426010 | None:intergenic | 15.0% |
| !!! | TACAAATTAAGACTTTTTTT+AGG | + | chr4_4:60425992-60426011 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | chr4_4:60426488-60426507 | None:intergenic | 15.0% |
| !!! | AAACAAAATTTATTTTAGCA+GGG | + | chr4_4:60426137-60426156 | None:intergenic | 15.0% |
| !!! | TAAACAAAATTTATTTTAGC+AGG | + | chr4_4:60426138-60426157 | None:intergenic | 15.0% |
| !!! | AATTTTTGCGATATTTTTTT+CGG | - | chr4_4:60426332-60426351 | Msa0692090:CDS | 15.0% |
| !! | AAGCATAAATTAAACAAATT+TGG | - | chr4_4:60426416-60426435 | Msa0692090:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | - | chr4_4:60426488-60426507 | Msa0692090:CDS | 15.0% |
| !! | TTCCTTAAAAATAAATAAGT+TGG | - | chr4_4:60426965-60426984 | Msa0692090:intron | 15.0% |
| !!! | TACCAACTTATTTATTTTTA+AGG | + | chr4_4:60426970-60426989 | None:intergenic | 15.0% |
| !! | TAAAACTAAATGATTAGAAA+AGG | + | chr4_4:60427066-60427085 | None:intergenic | 15.0% |
| !! | TGATATTTGAACAATTATTT+CGG | - | chr4_4:60427719-60427738 | Msa0692090:intron | 15.0% |
| !! | TTATAATAAGAACATAATGT+GGG | - | chr4_4:60427764-60427783 | Msa0692090:intron | 15.0% |
| !!! | TATTTAGTTTCATCTTAAAA+TGG | + | chr4_4:60427877-60427896 | None:intergenic | 15.0% |
| !!! | TTTTAAAGGATTTTTCTTTT+AGG | + | chr4_4:60428031-60428050 | None:intergenic | 15.0% |
| !!! | GTTAATTTAAACATTTTAAG+AGG | + | chr4_4:60428083-60428102 | None:intergenic | 15.0% |
| !!! | AAAAACAAGTTTGTTTTATT+TGG | - | chr4_4:60428594-60428613 | Msa0692090:intron | 15.0% |
| !!! | TTTAAATTTGCTAAAGATAA+TGG | - | chr4_4:60430606-60430625 | Msa0692090:intron | 15.0% |
| !!! | TTAAATTTGCTAAAGATAAT+GGG | - | chr4_4:60430607-60430626 | Msa0692090:intron | 15.0% |
| !! | TATAAAATGTTGTTAAATAG+TGG | - | chr4_4:60430763-60430782 | Msa0692090:intron | 15.0% |
| !! | AAGAAAAAAAGAGATTGAAT+GGG | + | chr4_4:60425486-60425505 | None:intergenic | 20.0% |
| !! | TAAGAAAAAAAGAGATTGAA+TGG | + | chr4_4:60425487-60425506 | None:intergenic | 20.0% |
| !! | TGATTTCATTTGAACTTAAT+TGG | - | chr4_4:60425565-60425584 | Msa0692090:CDS | 20.0% |
| !! | TAAAGTATGAAATTAGTCAA+CGG | - | chr4_4:60425925-60425944 | Msa0692090:intron | 20.0% |
| !!! | TTTAGGGTTAATTATGTTTT+TGG | - | chr4_4:60426017-60426036 | Msa0692090:intron | 20.0% |
| !!! | GTTTTTCAACAATTTTTTAC+AGG | + | chr4_4:60426386-60426405 | None:intergenic | 20.0% |
| !!! | TTAAGGGTTAATTATGTTTT+TGG | + | chr4_4:60426546-60426565 | None:intergenic | 20.0% |
| !! | TAATTAACCCTTAATTTCAA+TGG | - | chr4_4:60426552-60426571 | Msa0692090:CDS | 20.0% |
| !! | GTTAAAACCATTGAAATTAA+GGG | + | chr4_4:60426562-60426581 | None:intergenic | 20.0% |
| !! | TGTTAAAACCATTGAAATTA+AGG | + | chr4_4:60426563-60426582 | None:intergenic | 20.0% |
| !! | AGAAAAAGAAAGAAAAAAAG+TGG | - | chr4_4:60426622-60426641 | Msa0692090:CDS | 20.0% |
| !! | CTATCTATCTATATTATGAA+TGG | - | chr4_4:60427000-60427019 | Msa0692090:intron | 20.0% |
| !!! | TGGAAGCATATAAATTTTTT+TGG | - | chr4_4:60427151-60427170 | Msa0692090:intron | 20.0% |
| !! | AGTTGAGCATAAATAATAAA+TGG | - | chr4_4:60427651-60427670 | Msa0692090:intron | 20.0% |
| !! | GTTATAATAAGAACATAATG+TGG | - | chr4_4:60427763-60427782 | Msa0692090:intron | 20.0% |
| !!! | TTTCTTTTAGGTTAATTCTT+TGG | + | chr4_4:60428019-60428038 | None:intergenic | 20.0% |
| !!! | AAAATTTATATGACTGACTT+TGG | + | chr4_4:60428368-60428387 | None:intergenic | 20.0% |
| !! | TTCGAATCAATTAAAATAGT+CGG | - | chr4_4:60428522-60428541 | Msa0692090:intron | 20.0% |
| !!! | TTTGTTTTATTTGGTTCAAT+CGG | - | chr4_4:60428603-60428622 | Msa0692090:intron | 20.0% |
| !!! | AAAGATTATTTCTTATGTGT+CGG | + | chr4_4:60428977-60428996 | None:intergenic | 20.0% |
| !! | CTAAACAAATTCAACTAAAT+TGG | + | chr4_4:60429198-60429217 | None:intergenic | 20.0% |
| !!! | TTGAATTTGTTTAGATCTTT+GGG | - | chr4_4:60429204-60429223 | Msa0692090:intron | 20.0% |
| !!! | ATTTTTTTCTTCATATGCAT+CGG | + | chr4_4:60429695-60429714 | None:intergenic | 20.0% |
| !! | GGTAACTGAAATTTATTTAA+GGG | + | chr4_4:60429734-60429753 | None:intergenic | 20.0% |
| !! | AGGTAACTGAAATTTATTTA+AGG | + | chr4_4:60429735-60429754 | None:intergenic | 20.0% |
| !!! | TTTTTTACCATTACATTTGA+CGG | + | chr4_4:60429858-60429877 | None:intergenic | 20.0% |
| !! | TCAAATGTAATGGTAAAAAA+TGG | - | chr4_4:60429858-60429877 | Msa0692090:intron | 20.0% |
| !! | TTTAAATATTGTTTGTGCAT+TGG | - | chr4_4:60430193-60430212 | Msa0692090:intron | 20.0% |
| !!! | AGATTTTTGATATTTCATCT+CGG | - | chr4_4:60430224-60430243 | Msa0692090:intron | 20.0% |
| !!! | TTTCTTGAGTTTTTCTTTTT+TGG | - | chr4_4:60430538-60430557 | Msa0692090:intron | 20.0% |
| !! | TATGAAAATTAATCATCTCT+AGG | - | chr4_4:60430967-60430986 | Msa0692090:intron | 20.0% |
| !! | ATATGTAGACATAATCAATT+TGG | + | chr4_4:60431136-60431155 | None:intergenic | 20.0% |
| !! | AATTGATTATGTCTACATAT+AGG | - | chr4_4:60431136-60431155 | Msa0692090:intron | 20.0% |
| !! | ATATGTGTATTAAATTCTTC+AGG | - | chr4_4:60431391-60431410 | Msa0692090:intron | 20.0% |
| ! | AGAAAAAAAGAGATTGAATG+GGG | + | chr4_4:60425485-60425504 | None:intergenic | 25.0% |
| !!! | ATCTCTTTTTTTCTTAGTAC+AGG | - | chr4_4:60425491-60425510 | Msa0692090:intron | 25.0% |
| !!! | TCTCTTTTTTTCTTAGTACA+GGG | - | chr4_4:60425492-60425511 | Msa0692090:intron | 25.0% |
| ! | GGTTTGTAAAATTAGATACT+AGG | - | chr4_4:60425609-60425628 | Msa0692090:CDS | 25.0% |
| !!! | CTACATTCAATTTTGATGAA+GGG | - | chr4_4:60425652-60425671 | Msa0692090:CDS | 25.0% |
| !!! | TACATTCAATTTTGATGAAG+GGG | - | chr4_4:60425653-60425672 | Msa0692090:CDS | 25.0% |
| ! | GTGTTAAGAACGTTATTAAA+AGG | + | chr4_4:60426362-60426381 | None:intergenic | 25.0% |
| ! | AAACAAATTTGGATTGAGTA+AGG | - | chr4_4:60426427-60426446 | Msa0692090:intron | 25.0% |
| !!! | AATGTTAACTTGTGTTCTTA+AGG | + | chr4_4:60426945-60426964 | None:intergenic | 25.0% |
| !!! | TAGTTTTAGCAAAGCATTTA+TGG | - | chr4_4:60427078-60427097 | Msa0692090:intron | 25.0% |
| ! | ATCATTGATATCCTAAAATG+TGG | - | chr4_4:60427131-60427150 | Msa0692090:intron | 25.0% |
| !! | TTTATATGCTTCCACATTTT+AGG | + | chr4_4:60427145-60427164 | None:intergenic | 25.0% |
| !!! | ATATTTTGATCGATTCGTAT+GGG | + | chr4_4:60427323-60427342 | None:intergenic | 25.0% |
| ! | TCAAATTCAAATTGTCTCTA+TGG | + | chr4_4:60427695-60427714 | None:intergenic | 25.0% |
| ! | GTCTAAAAGTTGTACTAAAA+TGG | - | chr4_4:60427804-60427823 | Msa0692090:intron | 25.0% |
| !!! | TCTTCAAACGTTTTTTCTTT+TGG | + | chr4_4:60427926-60427945 | None:intergenic | 25.0% |
| ! | GTCAGACTTTACTTATTTAT+TGG | - | chr4_4:60427983-60428002 | Msa0692090:intron | 25.0% |
| ! | TGTTGTTGGATATTTATGTT+TGG | + | chr4_4:60428305-60428324 | None:intergenic | 25.0% |
| ! | ATCAATTAAAATAGTCGGTT+TGG | - | chr4_4:60428527-60428546 | Msa0692090:intron | 25.0% |
| !!! | CAAACTTGTTTTTCATTGTT+TGG | + | chr4_4:60428587-60428606 | None:intergenic | 25.0% |
| ! | AAAAATATGATGGTTTGATC+AGG | - | chr4_4:60429086-60429105 | Msa0692090:intron | 25.0% |
| ! | AAACCCGAATTTATAAAAGT+CGG | - | chr4_4:60429127-60429146 | Msa0692090:intron | 25.0% |
| !! | AAACCCGACTTTTATAAATT+CGG | + | chr4_4:60429134-60429153 | None:intergenic | 25.0% |
| !! | GTTGAATTTGTTTAGATCTT+TGG | - | chr4_4:60429203-60429222 | Msa0692090:intron | 25.0% |
| !!! | ATATTTTACTCTTCTGGTTA+GGG | + | chr4_4:60429268-60429287 | None:intergenic | 25.0% |
| ! | AAATACTAAAATACTCCTAG+CGG | + | chr4_4:60429476-60429495 | None:intergenic | 25.0% |
| ! | ATGAAATTGTATGATCAACA+AGG | - | chr4_4:60429607-60429626 | Msa0692090:intron | 25.0% |
| ! | ACTGAAATTTATTTAAGGGT+TGG | + | chr4_4:60429730-60429749 | None:intergenic | 25.0% |
| ! | ATGAGATTATTAGTAAGCAT+TGG | + | chr4_4:60429914-60429933 | None:intergenic | 25.0% |
| ! | GTTAATGAGAAAGAAAACAT+TGG | - | chr4_4:60430120-60430139 | Msa0692090:intron | 25.0% |
| !!! | AGTTTTTCTTTTTTGGTGAT+AGG | - | chr4_4:60430545-60430564 | Msa0692090:intron | 25.0% |
| ! | GTTCATACATGTAAACATTA+AGG | + | chr4_4:60430999-60431018 | None:intergenic | 25.0% |
| ! | TCAAAGAAGCTAAAAGATTT+GGG | - | chr4_4:60431504-60431523 | Msa0692090:CDS | 25.0% |
| !! | TTTGATGTACTATTTCTTCA+AGG | + | chr4_4:60431548-60431567 | None:intergenic | 25.0% |
| ! | AAGGTAAATAACCATAATCT+AGG | + | chr4_4:60431584-60431603 | None:intergenic | 25.0% |
| CCTTCATCAAAATTGAATGT+AGG | + | chr4_4:60425654-60425673 | None:intergenic | 30.0% | |
| !! | CCTACATTCAATTTTGATGA+AGG | - | chr4_4:60425651-60425670 | Msa0692090:CDS | 30.0% |
| !! | ACATTCAATTTTGATGAAGG+GGG | - | chr4_4:60425654-60425673 | Msa0692090:CDS | 30.0% |
| ACAATTTGATGCACAAGATA+TGG | - | chr4_4:60425702-60425721 | Msa0692090:CDS | 30.0% | |
| !! | CATACTTTAAAGTGTGTGTT+TGG | + | chr4_4:60425914-60425933 | None:intergenic | 30.0% |
| AAGTAAGGACTAAACTTACA+AGG | + | chr4_4:60426503-60426522 | None:intergenic | 30.0% | |
| ! | CAAGTTTAGAACACTATGAA+AGG | - | chr4_4:60426200-60426219 | Msa0692090:intron | 30.0% |
| !!! | TTTTGCGATATTTTTTTCGG+AGG | - | chr4_4:60426335-60426354 | Msa0692090:CDS | 30.0% |
| !!! | TGAGTGCAGAAATTTTTTGT+AGG | - | chr4_4:60426458-60426477 | Msa0692090:CDS | 30.0% |
| !!! | GAGTGCAGAAATTTTTTGTA+GGG | - | chr4_4:60426459-60426478 | Msa0692090:CDS | 30.0% |
| AAGTAAGGACTAAACTTACA+AGG | - | chr4_4:60426503-60426522 | Msa0692090:CDS | 30.0% | |
| AAGAAAAAAAGTGGCGTAAT+TGG | - | chr4_4:60426631-60426650 | Msa0692090:CDS | 30.0% | |
| TCTTAAGGCACAAGTTTAAA+AGG | + | chr4_4:60426930-60426949 | None:intergenic | 30.0% | |
| TATAGTAGTACTACTACTTG+TGG | - | chr4_4:60427226-60427245 | Msa0692090:intron | 30.0% | |
| TAAAAGATGAAATGATGCCA+CGG | + | chr4_4:60427253-60427272 | None:intergenic | 30.0% | |
| !!! | GATATTTTGATCGATTCGTA+TGG | + | chr4_4:60427324-60427343 | None:intergenic | 30.0% |
| TCAAATTGTCTCTATGGATT+TGG | + | chr4_4:60427689-60427708 | None:intergenic | 30.0% | |
| !! | AATTATTTCGGTGCAACTTT+TGG | - | chr4_4:60427731-60427750 | Msa0692090:intron | 30.0% |
| !! | TTAACTTGGCGAAAAAGTTT+TGG | - | chr4_4:60428098-60428117 | Msa0692090:intron | 30.0% |
| TATCGTTTATCAGTTTCACA+TGG | + | chr4_4:60428160-60428179 | None:intergenic | 30.0% | |
| GTCATATGCAAATATGTTGT+TGG | + | chr4_4:60428319-60428338 | None:intergenic | 30.0% | |
| !! | TTTAATGGGTTGGTTTAGTT+CGG | - | chr4_4:60428481-60428500 | Msa0692090:intron | 30.0% |
| ATCATTTCACGATATCTGTT+TGG | - | chr4_4:60428914-60428933 | Msa0692090:intron | 30.0% | |
| AACCCGAATTTATAAAAGTC+GGG | - | chr4_4:60429128-60429147 | Msa0692090:intron | 30.0% | |
| ! | AACCCGACTTTTATAAATTC+GGG | + | chr4_4:60429133-60429152 | None:intergenic | 30.0% |
| ! | ATTTGGTTTACACCTGAATA+AGG | - | chr4_4:60429159-60429178 | Msa0692090:intron | 30.0% |
| !!! | TCGATTTTTTGTCCTTATTC+AGG | + | chr4_4:60429174-60429193 | None:intergenic | 30.0% |
| !! | TATTTTACTCTTCTGGTTAG+GGG | + | chr4_4:60429267-60429286 | None:intergenic | 30.0% |
| !! | GATATTTTACTCTTCTGGTT+AGG | + | chr4_4:60429269-60429288 | None:intergenic | 30.0% |
| TAAATGACTAAAAAACCCAG+CGG | - | chr4_4:60429401-60429420 | Msa0692090:intron | 30.0% | |
| GTGTTAAGAAGAAATGAACA+AGG | + | chr4_4:60429579-60429598 | None:intergenic | 30.0% | |
| AATTGTATGATCAACAAGGT+CGG | - | chr4_4:60429611-60429630 | Msa0692090:intron | 30.0% | |
| !!! | AAGTGGTAGATTTTTGGTAA+TGG | - | chr4_4:60429647-60429666 | Msa0692090:intron | 30.0% |
| ATGAAACTCTATGATTGATC+AGG | - | chr4_4:60429820-60429839 | Msa0692090:intron | 30.0% | |
| TGAAATCCAATTCTGTGAAA+AGG | - | chr4_4:60430330-60430349 | Msa0692090:intron | 30.0% | |
| GAAATCCAATTCTGTGAAAA+GGG | - | chr4_4:60430331-60430350 | Msa0692090:intron | 30.0% | |
| ATTACTGCTAAAGATAGCAA+TGG | - | chr4_4:60430380-60430399 | Msa0692090:intron | 30.0% | |
| ! | TAATGGGATTGATCTTGTTT+CGG | - | chr4_4:60430623-60430642 | Msa0692090:intron | 30.0% |
| ATGTGTTTGTAATGAAAGCT+AGG | - | chr4_4:60430895-60430914 | Msa0692090:intron | 30.0% | |
| TGATGCACATTGAATATTCT+CGG | + | chr4_4:60431042-60431061 | None:intergenic | 30.0% | |
| TCCATGCTTAAAATTCAACA+CGG | - | chr4_4:60431090-60431109 | Msa0692090:intron | 30.0% | |
| ! | AGTTGGATTAGAATACTCTT+TGG | + | chr4_4:60431341-60431360 | None:intergenic | 30.0% |
| ! | TTCTTTGAGGAAATTTCAGT+AGG | + | chr4_4:60431492-60431511 | None:intergenic | 30.0% |
| !!! | CAAATCTTTTAGCTTCTTTG+AGG | + | chr4_4:60431505-60431524 | None:intergenic | 30.0% |
| CTCAAAGAAGCTAAAAGATT+TGG | - | chr4_4:60431503-60431522 | Msa0692090:CDS | 30.0% | |
| ATTATGTGTTGCCTAGATTA+TGG | - | chr4_4:60431570-60431589 | Msa0692090:CDS | 30.0% | |
| GTAACACAATATTTGGCAGT+AGG | + | chr4_4:60425368-60425387 | None:intergenic | 35.0% | |
| ACTGCCAAATATTGTGTTAC+AGG | - | chr4_4:60425368-60425387 | Msa0692090:CDS | 35.0% | |
| TAGTACAGGGAGAAAGAATT+AGG | - | chr4_4:60425505-60425524 | Msa0692090:intron | 35.0% | |
| !! | CATTCAATTTTGATGAAGGG+GGG | - | chr4_4:60425655-60425674 | Msa0692090:CDS | 35.0% |
| ! | TACAAGGTCGCAATTTTGTA+GGG | + | chr4_4:60426519-60426538 | None:intergenic | 35.0% |
| ! | TTACAAGGTCGCAATTTTGT+AGG | + | chr4_4:60426518-60426537 | None:intergenic | 35.0% |
| ! | TTACAAGGTCGCAATTTTGT+AGG | - | chr4_4:60426518-60426537 | Msa0692090:CDS | 35.0% |
| ! | TACAAGGTCGCAATTTTGTA+GGG | - | chr4_4:60426519-60426538 | Msa0692090:CDS | 35.0% |
| AAAAGATGAAATGATGCCAC+GGG | + | chr4_4:60427252-60427271 | None:intergenic | 35.0% | |
| !!! | GGGAGTGAATGTTTTTTGTT+GGG | + | chr4_4:60427303-60427322 | None:intergenic | 35.0% |
| !!! | TGGGAGTGAATGTTTTTTGT+TGG | + | chr4_4:60427304-60427323 | None:intergenic | 35.0% |
| TACGTGAGTTAACTTACGTT+CGG | - | chr4_4:60427347-60427366 | Msa0692090:intron | 35.0% | |
| ATGTATGAGTTAACTTACGC+TGG | - | chr4_4:60427417-60427436 | Msa0692090:intron | 35.0% | |
| TGTATGAGTTAACTTACGCT+GGG | - | chr4_4:60427418-60427437 | Msa0692090:intron | 35.0% | |
| ! | CTTATATCACGTTTGCTACA+TGG | + | chr4_4:60427511-60427530 | None:intergenic | 35.0% |
| AAACGTGATATAAGTCATGC+TGG | - | chr4_4:60427517-60427536 | Msa0692090:intron | 35.0% | |
| AACGTGATATAAGTCATGCT+GGG | - | chr4_4:60427518-60427537 | Msa0692090:intron | 35.0% | |
| CAACATGGATGATTACTGTA+AGG | + | chr4_4:60428446-60428465 | None:intergenic | 35.0% | |
| CTTACAGTAATCATCCATGT+TGG | - | chr4_4:60428444-60428463 | Msa0692090:intron | 35.0% | |
| !! | GTTGGTTTAGTTCGGTTTTT+AGG | - | chr4_4:60428489-60428508 | Msa0692090:intron | 35.0% |
| !!! | TCTGTTTGGCATGTTTTGAT+TGG | - | chr4_4:60428928-60428947 | Msa0692090:intron | 35.0% |
| AAAGTCGGGTTTGATTGATT+TGG | - | chr4_4:60429142-60429161 | Msa0692090:intron | 35.0% | |
| ! | GTTTAGATCTTTGGGTTCAT+CGG | - | chr4_4:60429212-60429231 | Msa0692090:intron | 35.0% |
| !! | ATTTTACTCTTCTGGTTAGG+GGG | + | chr4_4:60429266-60429285 | None:intergenic | 35.0% |
| ! | GAAGGGATATTTTACTCTTC+TGG | + | chr4_4:60429274-60429293 | None:intergenic | 35.0% |
| AAAATATCCCTTCCCTTGAA+TGG | - | chr4_4:60429281-60429300 | Msa0692090:intron | 35.0% | |
| !!! | GTTGATGGGTTTTTAGCATA+TGG | + | chr4_4:60429333-60429352 | None:intergenic | 35.0% |
| TTCTGACATCCAATATGTCT+TGG | - | chr4_4:60429369-60429388 | Msa0692090:intron | 35.0% | |
| CTTGTGTTTCCAAGACATAT+TGG | + | chr4_4:60429381-60429400 | None:intergenic | 35.0% | |
| CTGGCTTATAACTAGAAAAC+CGG | + | chr4_4:60429440-60429459 | None:intergenic | 35.0% | |
| !!! | GTTTTCTAGTTATAAGCCAG+CGG | - | chr4_4:60429440-60429459 | Msa0692090:intron | 35.0% |
| ! | CAACACAAGTGGTAGATTTT+TGG | - | chr4_4:60429641-60429660 | Msa0692090:intron | 35.0% |
| GTGATTTCCGTCAAATGTAA+TGG | - | chr4_4:60429848-60429867 | Msa0692090:intron | 35.0% | |
| CAAGCATGTATCGAAATGAA+AGG | + | chr4_4:60429884-60429903 | None:intergenic | 35.0% | |
| ! | AACGCATTGATAATCATCGA+AGG | - | chr4_4:60430149-60430168 | Msa0692090:intron | 35.0% |
| ATAATTGACCCTGCAATCAA+AGG | - | chr4_4:60430281-60430300 | Msa0692090:intron | 35.0% | |
| TTATGGTTCCTTTGATTGCA+GGG | + | chr4_4:60430292-60430311 | None:intergenic | 35.0% | |
| TTTATGGTTCCTTTGATTGC+AGG | + | chr4_4:60430293-60430312 | None:intergenic | 35.0% | |
| ATTTCAAGCAAGATTTGAGC+AGG | + | chr4_4:60430316-60430335 | None:intergenic | 35.0% | |
| ! | AACAACCCTTTTCACAGAAT+TGG | + | chr4_4:60430339-60430358 | None:intergenic | 35.0% |
| CTAAAGATAGCAATGGAAAG+TGG | - | chr4_4:60430387-60430406 | Msa0692090:intron | 35.0% | |
| TGGCAAGATTCATCAACAAT+AGG | + | chr4_4:60430416-60430435 | None:intergenic | 35.0% | |
| ACACAGTGTCAGTTTGTATT+TGG | + | chr4_4:60430436-60430455 | None:intergenic | 35.0% | |
| AAATACAAACTGACACTGTG+TGG | - | chr4_4:60430435-60430454 | Msa0692090:intron | 35.0% | |
| TGAACAATGCTAGTAGTAGT+AGG | + | chr4_4:60430502-60430521 | None:intergenic | 35.0% | |
| GTACATTAGCAGTGAAAAAC+GGG | + | chr4_4:60430671-60430690 | None:intergenic | 35.0% | |
| GGTACATTAGCAGTGAAAAA+CGG | + | chr4_4:60430672-60430691 | None:intergenic | 35.0% | |
| AGCAGAACTTTAACACTTGA+AGG | + | chr4_4:60430693-60430712 | None:intergenic | 35.0% | |
| TATAAAGTCACCTGTTAGTG+AGG | + | chr4_4:60430718-60430737 | None:intergenic | 35.0% | |
| TTGAATATTCTCGGGGAATT+CGG | + | chr4_4:60431033-60431052 | None:intergenic | 35.0% | |
| ATGCACATTGAATATTCTCG+GGG | + | chr4_4:60431040-60431059 | None:intergenic | 35.0% | |
| GATGCACATTGAATATTCTC+GGG | + | chr4_4:60431041-60431060 | None:intergenic | 35.0% | |
| CCATGCTTAAAATTCAACAC+GGG | - | chr4_4:60431091-60431110 | Msa0692090:intron | 35.0% | |
| GACATAATCAATTTGGTCAG+TGG | + | chr4_4:60431129-60431148 | None:intergenic | 35.0% | |
| CAATGCTCACATATTCTTGA+TGG | - | chr4_4:60431240-60431259 | Msa0692090:intron | 35.0% | |
| ATTCTAATCCAACTACGCTA+AGG | - | chr4_4:60431347-60431366 | Msa0692090:intron | 35.0% | |
| GAAGAGTCAGAAATATGACA+AGG | - | chr4_4:60431464-60431483 | Msa0692090:CDS | 35.0% | |
| GGCACCTGTAACACAATATT+TGG | + | chr4_4:60425375-60425394 | None:intergenic | 40.0% | |
| GTTGAAGCTCTTCTTCAAAG+AGG | - | chr4_4:60425419-60425438 | Msa0692090:CDS | 40.0% | |
| ATCTCTGACAGTAGCATGAA+CGG | + | chr4_4:60425450-60425469 | None:intergenic | 40.0% | |
| ATTGAATGGGGATACTAACC+AGG | + | chr4_4:60425473-60425492 | None:intergenic | 40.0% | |
| ATAGCTATGTCCATCCTAGT+TGG | + | chr4_4:60425682-60425701 | None:intergenic | 40.0% | |
| ACGTAAGTTAACTCACGTAG+AGG | + | chr4_4:60427346-60427365 | None:intergenic | 40.0% | |
| GTATGAGTTAACTTACGCTG+GGG | - | chr4_4:60427419-60427438 | Msa0692090:intron | 40.0% | |
| CATGAGTGAGTTAATTCTCG+CGG | - | chr4_4:60427548-60427567 | Msa0692090:intron | 40.0% | |
| ATGAGTGAGTTAATTCTCGC+GGG | - | chr4_4:60427549-60427568 | Msa0692090:intron | 40.0% | |
| ! | ATCTTTGGGTTCATCGGAAT+CGG | - | chr4_4:60429218-60429237 | Msa0692090:intron | 40.0% |
| CGGAATCGGATCATTTGATT+AGG | - | chr4_4:60429232-60429251 | Msa0692090:intron | 40.0% | |
| !! | TTTTACTCTTCTGGTTAGGG+GGG | + | chr4_4:60429265-60429284 | None:intergenic | 40.0% |
| CTCTATGATTGATCAGGACT+CGG | - | chr4_4:60429826-60429845 | Msa0692090:intron | 40.0% | |
| ATTGCATTGAAGCTGCAACA+TGG | + | chr4_4:60430095-60430114 | None:intergenic | 40.0% | |
| GCAAGATTTGAGCAGGTTTA+TGG | + | chr4_4:60430309-60430328 | None:intergenic | 40.0% | |
| GAATACACAACCAAGTGGAT+GGG | - | chr4_4:60430457-60430476 | Msa0692090:intron | 40.0% | |
| ATGCTAGTAGTAGTAGGCTA+AGG | + | chr4_4:60430496-60430515 | None:intergenic | 40.0% | |
| ! | GTTATAACAAGCACTGTTGC+AGG | - | chr4_4:60430645-60430664 | Msa0692090:intron | 40.0% |
| TATGCTACAACTCTACAGCA+CGG | + | chr4_4:60430795-60430814 | None:intergenic | 40.0% | |
| TGCGAAAAATAGCAGTGTGT+AGG | + | chr4_4:60430824-60430843 | None:intergenic | 40.0% | |
| ! | CCCGTGTTGAATTTTAAGCA+TGG | + | chr4_4:60431094-60431113 | None:intergenic | 40.0% |
| ATCTGCTGTAAATGCACGAA+TGG | - | chr4_4:60431183-60431202 | Msa0692090:intron | 40.0% | |
| TCTGCTGTAAATGCACGAAT+GGG | - | chr4_4:60431184-60431203 | Msa0692090:intron | 40.0% | |
| ATGGAACATGCTAAAGCAGA+AGG | - | chr4_4:60431259-60431278 | Msa0692090:intron | 40.0% | |
| AACATGCTAAAGCAGAAGGT+AGG | - | chr4_4:60431263-60431282 | Msa0692090:intron | 40.0% | |
| GAGTATTACCTTAGCGTAGT+TGG | + | chr4_4:60431358-60431377 | None:intergenic | 40.0% | |
| TTCCTACACATATATGCAGC+AGG | - | chr4_4:60431442-60431461 | Msa0692090:intron | 40.0% | |
| TTCCTGCTGCATATATGTGT+AGG | + | chr4_4:60431447-60431466 | None:intergenic | 40.0% | |
| ! | TATTGTGTTACAGGTGCCAC+AGG | - | chr4_4:60425377-60425396 | Msa0692090:CDS | 45.0% |
| ! | ATTGTGTTACAGGTGCCACA+GGG | - | chr4_4:60425378-60425397 | Msa0692090:CDS | 45.0% |
| CCATGAACCAATATACCCTG+TGG | + | chr4_4:60425396-60425415 | None:intergenic | 45.0% | |
| !! | CCACAGGGTATATTGGTTCA+TGG | - | chr4_4:60425393-60425412 | Msa0692090:CDS | 45.0% |
| TGTGTGTTTGGTTGTGTCGT+GGG | + | chr4_4:60425902-60425921 | None:intergenic | 45.0% | |
| AGTGGCGTAATTGGAGATTC+AGG | - | chr4_4:60426640-60426659 | Msa0692090:CDS | 45.0% | |
| CAGCGTGAGTTAACTCATGT+AGG | + | chr4_4:60427388-60427407 | None:intergenic | 45.0% | |
| CTACATGAGTTAACTCACGC+TGG | - | chr4_4:60427386-60427405 | Msa0692090:intron | 45.0% | |
| TCACGTGAGTTAACTCATGC+AGG | + | chr4_4:60427482-60427501 | None:intergenic | 45.0% | |
| TGCTAGAGCAGGGGTTTAAT+GGG | - | chr4_4:60428467-60428486 | Msa0692090:intron | 45.0% | |
| ATCCCTTCCCTTGAATGGTT+TGG | - | chr4_4:60429286-60429305 | Msa0692090:intron | 45.0% | |
| TCCCTTCCCTTGAATGGTTT+GGG | - | chr4_4:60429287-60429306 | Msa0692090:intron | 45.0% | |
| AATGGGCCCAAACCATTCAA+GGG | + | chr4_4:60429296-60429315 | None:intergenic | 45.0% | |
| AAATGGGCCCAAACCATTCA+AGG | + | chr4_4:60429297-60429316 | None:intergenic | 45.0% | |
| ! | TTGAATGGTTTGGGCCCATT+TGG | - | chr4_4:60429296-60429315 | Msa0692090:intron | 45.0% |
| GCAACAGTCTGGTTGTTGAT+GGG | + | chr4_4:60429347-60429366 | None:intergenic | 45.0% | |
| AGCAACAGTCTGGTTGTTGA+TGG | + | chr4_4:60429348-60429367 | None:intergenic | 45.0% | |
| ATGTCAGAACAGCAACAGTC+TGG | + | chr4_4:60429358-60429377 | None:intergenic | 45.0% | |
| TTGTCATTGTCCAACAGCCA+AGG | - | chr4_4:60429537-60429556 | Msa0692090:intron | 45.0% | |
| TGTCATTGTCCAACAGCCAA+GGG | - | chr4_4:60429538-60429557 | Msa0692090:intron | 45.0% | |
| GTTCATTGTGAGCATTCCCT+TGG | + | chr4_4:60429557-60429576 | None:intergenic | 45.0% | |
| ! | TGCATCGGTCACGAATTTGA+CGG | + | chr4_4:60429680-60429699 | None:intergenic | 45.0% |
| CAGCGCGGAAAAATCTCAAT+TGG | + | chr4_4:60430017-60430036 | None:intergenic | 45.0% | |
| AGCTTCGATGAGGCAGTAAA+AGG | - | chr4_4:60430054-60430073 | Msa0692090:intron | 45.0% | |
| GAGGCAGTAAAAGGATGTGA+TGG | - | chr4_4:60430063-60430082 | Msa0692090:intron | 45.0% | |
| GTGTGGAATACACAACCAAG+TGG | - | chr4_4:60430452-60430471 | Msa0692090:intron | 45.0% | |
| GGAATACACAACCAAGTGGA+TGG | - | chr4_4:60430456-60430475 | Msa0692090:intron | 45.0% | |
| CCATTACTTACCCATCCACT+TGG | + | chr4_4:60430470-60430489 | None:intergenic | 45.0% | |
| CCAAGTGGATGGGTAAGTAA+TGG | - | chr4_4:60430467-60430486 | Msa0692090:intron | 45.0% | |
| CTGCTGTAAATGCACGAATG+GGG | - | chr4_4:60431185-60431204 | Msa0692090:intron | 45.0% | |
| AAGCTGTACACTGCCTAACT+TGG | - | chr4_4:60431303-60431322 | Msa0692090:intron | 45.0% | |
| GAAACAAGAGCTGCCAAGTT+AGG | + | chr4_4:60431319-60431338 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTATGTAAAAAAAA+AGG | - | chr4_4:60426748-60426767 | Msa0692090:intron | 5.0% |
| !!! | TATTTTCTTAAAAATAAAAA+AGG | - | chr4_4:60426815-60426834 | Msa0692090:CDS | 5.0% |
| !!! | TTTTTTTATGTAAAAAAAAA+AGG | - | chr4_4:60426749-60426768 | Msa0692090:intron | 5.0% |
| !!! | ATATTTTTCTTTTTTTAAAA+GGG | + | chr4_4:60427209-60427228 | None:intergenic | 5.0% |
| !!! | TATATTTTTCTTTTTTTAAA+AGG | + | chr4_4:60427210-60427229 | None:intergenic | 5.0% |
| !!! | TAAATAATTCTTTTTTTTAA+AGG | + | chr4_4:60428045-60428064 | None:intergenic | 5.0% |
| !!! | TAAAAAAATTATTTTTTTGA+AGG | + | chr4_4:60428768-60428787 | None:intergenic | 5.0% |
| !! | AATAATATTAAAAAATATGA+TGG | - | chr4_4:60429076-60429095 | Msa0692090:intron | 5.0% |
| ! | ACAGGTGCCACAGGGTATAT+TGG | - | chr4_4:60425386-60425405 | Msa0692090:CDS | 50.0% |
| CATGCTACTGTCAGAGATCC+TGG | - | chr4_4:60425452-60425471 | Msa0692090:intron | 50.0% | |
| GTGTGTGTTTGGTTGTGTCG+TGG | + | chr4_4:60425903-60425922 | None:intergenic | 50.0% | |
| CAGCGTGAGTTAACTCATGC+AGG | + | chr4_4:60427450-60427469 | None:intergenic | 50.0% | |
| GCATGAGTTAACTCACGCTG+TGG | - | chr4_4:60427450-60427469 | Msa0692090:intron | 50.0% | |
| !! | ATCCATGTTGGTGCTAGAGC+AGG | - | chr4_4:60428456-60428475 | Msa0692090:intron | 50.0% |
| !! | TCCATGTTGGTGCTAGAGCA+GGG | - | chr4_4:60428457-60428476 | Msa0692090:intron | 50.0% |
| GTGCTAGAGCAGGGGTTTAA+TGG | - | chr4_4:60428466-60428485 | Msa0692090:intron | 50.0% | |
| ! | AGAGCAGGGGTTTAATGGGT+TGG | - | chr4_4:60428471-60428490 | Msa0692090:intron | 50.0% |
| TTGATCAGGTCTCGAGTGAC+TGG | - | chr4_4:60429100-60429119 | Msa0692090:intron | 50.0% | |
| GCCCAAACCATTCAAGGGAA+GGG | + | chr4_4:60429291-60429310 | None:intergenic | 50.0% | |
| TAGCGGTAGTTAACTACCGC+TGG | + | chr4_4:60429459-60429478 | None:intergenic | 50.0% | |
| AGCGGTAGTTAACTACCGCT+AGG | - | chr4_4:60429458-60429477 | Msa0692090:intron | 50.0% | |
| TCGGTGTGACACAACACAAG+TGG | - | chr4_4:60429630-60429649 | Msa0692090:intron | 50.0% | |
| CGTTACACCTCCTGTCATTG+TGG | - | chr4_4:60429980-60429999 | Msa0692090:intron | 50.0% | |
| ACACCTCCTGTCATTGTGGA+AGG | - | chr4_4:60429984-60430003 | Msa0692090:intron | 50.0% | |
| CACCTCCTGTCATTGTGGAA+GGG | - | chr4_4:60429985-60430004 | Msa0692090:intron | 50.0% | |
| CTTCTTCGTGCAAATCAGCG+CGG | + | chr4_4:60430032-60430051 | None:intergenic | 50.0% | |
| CGAAGAAGGAAGCTTCGATG+AGG | - | chr4_4:60430044-60430063 | Msa0692090:intron | 50.0% | |
| GTTCTGCTGTCCTCACTAAC+AGG | - | chr4_4:60430705-60430724 | Msa0692090:intron | 50.0% | |
| TGATGAAGGGGGGACCAACT+AGG | - | chr4_4:60425665-60425684 | Msa0692090:CDS | 55.0% | |
| GTACTACTACTTGTGGCCCG+TGG | - | chr4_4:60427233-60427252 | Msa0692090:intron | 55.0% | |
| !! | CCATGTTGGTGCTAGAGCAG+GGG | - | chr4_4:60428458-60428477 | Msa0692090:intron | 55.0% |
| GGCCCAAACCATTCAAGGGA+AGG | + | chr4_4:60429292-60429311 | None:intergenic | 55.0% | |
| GGCAGCAGTTAACTACCGCT+GGG | + | chr4_4:60429419-60429438 | None:intergenic | 55.0% | |
| CAGCGGTAGTTAACTGCTGC+CGG | - | chr4_4:60429418-60429437 | Msa0692090:intron | 55.0% | |
| GTGAGCATTCCCTTGGCTGT+TGG | + | chr4_4:60429550-60429569 | None:intergenic | 55.0% | |
| CACCCTTCCACAATGACAGG+AGG | + | chr4_4:60429990-60430009 | None:intergenic | 55.0% | |
| CTCCTGTCATTGTGGAAGGG+TGG | - | chr4_4:60429988-60430007 | Msa0692090:intron | 55.0% | |
| CACCACCCTTCCACAATGAC+AGG | + | chr4_4:60429993-60430012 | None:intergenic | 55.0% | |
| !! | CGCGCTGATTTGCACGAAGA+AGG | - | chr4_4:60430030-60430049 | Msa0692090:intron | 55.0% |
| GAAGGGGGGACCAACTAGGA+TGG | - | chr4_4:60425669-60425688 | Msa0692090:CDS | 60.0% | |
| CCCCTGCTCTAGCACCAACA+TGG | + | chr4_4:60428461-60428480 | None:intergenic | 60.0% | |
| CGGCAGCAGTTAACTACCGC+TGG | + | chr4_4:60429420-60429439 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 60425320 | 60431611 | 60425320 | ID=Msa0692090;Name=Msa0692090 |
| chr4_4 | mRNA | 60425320 | 60431611 | 60425320 | ID=Msa0692090-mRNA-1;Parent=Msa0692090;Name=Msa0692090-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|6|0|353 |
| chr4_4 | exon | 60431458 | 60431611 | 60431458 | ID=Msa0692090-mRNA-1:exon:16597;Parent=Msa0692090-mRNA-1 |
| chr4_4 | exon | 60426790 | 60426957 | 60426790 | ID=Msa0692090-mRNA-1:exon:16596;Parent=Msa0692090-mRNA-1 |
| chr4_4 | exon | 60426453 | 60426670 | 60426453 | ID=Msa0692090-mRNA-1:exon:16595;Parent=Msa0692090-mRNA-1 |
| chr4_4 | exon | 60426205 | 60426364 | 60426205 | ID=Msa0692090-mRNA-1:exon:16594;Parent=Msa0692090-mRNA-1 |
| chr4_4 | exon | 60425563 | 60425773 | 60425563 | ID=Msa0692090-mRNA-1:exon:16593;Parent=Msa0692090-mRNA-1 |
| chr4_4 | exon | 60425320 | 60425470 | 60425320 | ID=Msa0692090-mRNA-1:exon:16592;Parent=Msa0692090-mRNA-1 |
| chr4_4 | CDS | 60431458 | 60431611 | 60431458 | ID=Msa0692090-mRNA-1:cds;Parent=Msa0692090-mRNA-1 |
| chr4_4 | CDS | 60426790 | 60426957 | 60426790 | ID=Msa0692090-mRNA-1:cds;Parent=Msa0692090-mRNA-1 |
| chr4_4 | CDS | 60426453 | 60426670 | 60426453 | ID=Msa0692090-mRNA-1:cds;Parent=Msa0692090-mRNA-1 |
| chr4_4 | CDS | 60426205 | 60426364 | 60426205 | ID=Msa0692090-mRNA-1:cds;Parent=Msa0692090-mRNA-1 |
| chr4_4 | CDS | 60425563 | 60425773 | 60425563 | ID=Msa0692090-mRNA-1:cds;Parent=Msa0692090-mRNA-1 |
| chr4_4 | CDS | 60425320 | 60425470 | 60425320 | ID=Msa0692090-mRNA-1:cds;Parent=Msa0692090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
