Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0301870 | RCV35100.1 | 100.000 | 103 | 0 | 0 | 1 | 103 | 130 | 232 | 7.14e-67 | 218 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0301870 | sp|P0CG89|H4_SOYBN | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.91e-67 | 206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0301870 | A0A251US17 | 99.048 | 105 | 1 | 0 | 1 | 105 | 1 | 105 | 8.44e-66 | 209 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007850 | Msa0301870 | 0.801226 | 9.952363e-49 | -8.615850e-47 |
| Msa0031510 | Msa0301870 | 0.823620 | 1.255448e-53 | -8.615850e-47 |
| Msa0126520 | Msa0301870 | 0.840628 | 7.754817e-58 | -8.615850e-47 |
| Msa0148930 | Msa0301870 | 0.837222 | 5.903669e-57 | -8.615850e-47 |
| Msa0168940 | Msa0301870 | 0.815697 | 8.095889e-52 | -8.615850e-47 |
| Msa0262480 | Msa0301870 | 0.819203 | 1.313696e-52 | -8.615850e-47 |
| Msa0291520 | Msa0301870 | 0.804402 | 2.197868e-49 | -8.615850e-47 |
| Msa0300350 | Msa0301870 | 0.800304 | 1.534911e-48 | -8.615850e-47 |
| Msa0301870 | Msa0512850 | 0.800423 | 1.451603e-48 | -8.615850e-47 |
| Msa0301870 | Msa0548880 | -0.824494 | 7.829794e-54 | -8.615850e-47 |
| Msa0301870 | Msa0603840 | -0.828967 | 6.696259e-55 | -8.615850e-47 |
| Msa0301870 | Msa0609000 | 0.813377 | 2.639999e-51 | -8.615850e-47 |
| Msa0301870 | Msa0619860 | 0.802708 | 4.935140e-49 | -8.615850e-47 |
| Msa0301870 | Msa0666230 | 0.803558 | 3.291745e-49 | -8.615850e-47 |
| Msa0301870 | Msa0694990 | 0.810934 | 9.006599e-51 | -8.615850e-47 |
| Msa0301870 | Msa0699190 | 0.820768 | 5.762118e-53 | -8.615850e-47 |
| Msa0301870 | Msa0858440 | 0.809258 | 2.067665e-50 | -8.615850e-47 |
| Msa0301870 | Msa0888940 | 0.800605 | 1.332385e-48 | -8.615850e-47 |
| Msa0301870 | Msa0957450 | -0.812420 | 4.277431e-51 | -8.615850e-47 |
| Msa0301870 | Msa0960830 | 0.831815 | 1.347954e-55 | -8.615850e-47 |
| Msa0301870 | Msa0963020 | 0.834142 | 3.556342e-56 | -8.615850e-47 |
| Msa0301870 | Msa0980940 | 0.801176 | 1.018535e-48 | -8.615850e-47 |
| Msa0301870 | Msa0994290 | 0.820940 | 5.258566e-53 | -8.615850e-47 |
| Msa0301870 | Msa1025940 | 0.809672 | 1.685479e-50 | -8.615850e-47 |
| Msa0301870 | Msa1166870 | 0.808740 | 2.669789e-50 | -8.615850e-47 |
| Msa0301870 | Msa1184370 | 0.823810 | 1.133170e-53 | -8.615850e-47 |
| Msa0301870 | Msa1192850 | 0.824596 | 7.409438e-54 | -8.615850e-47 |
| Msa0301870 | Msa1201830 | 0.800923 | 1.147416e-48 | -8.615850e-47 |
| Msa0301870 | Msa1227690 | 0.820345 | 7.204981e-53 | -8.615850e-47 |
| Msa0301870 | Msa1256770 | 0.818840 | 1.589136e-52 | -8.615850e-47 |
| Msa0301870 | Msa1294840 | 0.819388 | 1.192039e-52 | -8.615850e-47 |
| Msa0301870 | Msa1316680 | 0.801052 | 1.079963e-48 | -8.615850e-47 |
| Msa0301870 | Msa1327490 | 0.815241 | 1.022687e-51 | -8.615850e-47 |
| Msa0301870 | Msa1344850 | 0.826597 | 2.485516e-54 | -8.615850e-47 |
| Msa0301870 | Msa1345450 | 0.815504 | 8.937311e-52 | -8.615850e-47 |
| Msa0301870 | Msa1349570 | 0.812165 | 4.862491e-51 | -8.615850e-47 |
| Msa0301870 | Msa1363860 | 0.805149 | 1.534229e-49 | -8.615850e-47 |
| Msa0301870 | Msa1369190 | 0.824061 | 9.895315e-54 | -8.615850e-47 |
| Msa0301870 | Msa1397940 | 0.814411 | 1.561793e-51 | -8.615850e-47 |
| Msa0301870 | Msa1404190 | 0.808125 | 3.611531e-50 | -8.615850e-47 |
| Msa0301870 | Msa1450280 | 0.818500 | 1.897328e-52 | -8.615850e-47 |
| Msa0301870 | Msa1462860 | 0.806585 | 7.660459e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0301870 | MtrunA17_Chr5g0425951 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.88e-68 | 206 |
| Msa0301870 | MtrunA17_Chr4g0030431 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.88e-68 | 206 |
| Msa0301870 | MtrunA17_Chr3g0100121 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.88e-68 | 206 |
| Msa0301870 | MtrunA17_Chr3g0113681 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.88e-68 | 206 |
| Msa0301870 | MtrunA17_Chr2g0327641 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.88e-68 | 206 |
| Msa0301870 | MtrunA17_Chr3g0103351 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.88e-68 | 206 |
| Msa0301870 | MtrunA17_Chr8g0352791 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.88e-68 | 206 |
| Msa0301870 | MtrunA17_Chr3g0103821 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.88e-68 | 206 |
| Msa0301870 | MtrunA17_Chr3g0104031 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.88e-68 | 206 |
| Msa0301870 | MtrunA17_Chr7g0225731 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.88e-68 | 206 |
| Msa0301870 | MtrunA17_Chr3g0103801 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.88e-68 | 206 |
| Msa0301870 | MtrunA17_Chr3g0103881 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.88e-68 | 206 |
| Msa0301870 | MtrunA17_Chr7g0262791 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.88e-68 | 206 |
| Msa0301870 | MtrunA17_Chr4g0072411 | 100.000 | 103 | 0 | 0 | 1 | 103 | 59 | 161 | 4.51e-68 | 207 |
| Msa0301870 | MtrunA17_Chr2g0327651 | 78.873 | 71 | 15 | 0 | 157 | 227 | 22 | 92 | 1.50e-33 | 118 |
| Msa0301870 | MtrunA17_Chr7g0217811 | 33.835 | 133 | 55 | 3 | 165 | 264 | 64 | 196 | 2.22e-13 | 67.4 |
| Msa0301870 | MtrunA17_Chr2g0302541 | 33.083 | 133 | 56 | 3 | 165 | 264 | 64 | 196 | 1.44e-12 | 65.1 |
| Msa0301870 | MtrunA17_Chr3g0115141 | 31.783 | 129 | 55 | 3 | 166 | 262 | 68 | 195 | 8.21e-12 | 63.2 |
| Msa0301870 | MtrunA17_Chr4g0012651 | 32.331 | 133 | 57 | 3 | 165 | 264 | 64 | 196 | 9.47e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0301870 | AT3G53730.1 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.97e-68 | 206 |
| Msa0301870 | AT1G07820.2 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.97e-68 | 206 |
| Msa0301870 | AT1G07820.1 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.97e-68 | 206 |
| Msa0301870 | AT5G59690.1 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.97e-68 | 206 |
| Msa0301870 | AT3G46320.1 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.97e-68 | 206 |
| Msa0301870 | AT2G28740.1 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.97e-68 | 206 |
| Msa0301870 | AT1G07660.1 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.97e-68 | 206 |
| Msa0301870 | AT3G45930.1 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.97e-68 | 206 |
| Msa0301870 | AT5G59970.1 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.97e-68 | 206 |
| Msa0301870 | AT5G59970.2 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.97e-68 | 206 |
| Msa0301870 | AT1G07660.2 | 83.495 | 103 | 0 | 1 | 1 | 103 | 1 | 86 | 1.28e-50 | 161 |
Find 66 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGACAAGGAAGGACTCTTTA+TGG | 0.217305 | 2_3:+58420164 | Msa0301870:CDS |
| TTGCGATGGTATTACTTATT+GGG | 0.261353 | 2_3:+58421156 | Msa0301870:CDS |
| GGAAGGACTCTTTATGGATT+TGG | 0.266178 | 2_3:+58420170 | Msa0301870:CDS |
| CCCGCTGGTTTCCAGTTTGC+TGG | 0.285182 | 2_3:+58422152 | Msa0301870:CDS |
| GTTGCGATGGTATTACTTAT+TGG | 0.321655 | 2_3:+58421155 | Msa0301870:CDS |
| GAAGGACTCTTTATGGATTT+GGG | 0.322097 | 2_3:+58420171 | Msa0301870:CDS |
| TTGTTGCGAATCAAGATGTC+TGG | 0.363585 | 2_3:+58419873 | None:intergenic |
| TTGAGTAACAGTGGAGGGTT+TGG | 0.367973 | 2_3:-58422180 | None:intergenic |
| CAACGGCATTGGTATCTCTA+TGG | 0.371115 | 2_3:+58421886 | Msa0301870:CDS |
| TGGAAAAGGTGGAAAGGGAT+TGG | 0.405096 | 2_3:+58419899 | Msa0301870:CDS |
| GGAAAAGGTGGAAAGGGATT+GGG | 0.428595 | 2_3:+58419900 | Msa0301870:CDS |
| GACATTGTTGAATGATTCAA+TGG | 0.433344 | 2_3:-58421825 | None:intergenic |
| GAAACCCGCTATTCGTCGTT+TGG | 0.435441 | 2_3:+58419980 | Msa0301870:CDS |
| GGAAAGGGATTGGGAAAGGG+AGG | 0.438545 | 2_3:+58419909 | Msa0301870:CDS |
| GTTTGGTGTTGCCAGCAAAC+TGG | 0.439491 | 2_3:-58422163 | None:intergenic |
| GAAATTTACTCATCACTGTC+GGG | 0.445530 | 2_3:-58421856 | None:intergenic |
| AAGATGTCTGGGCGTGGAAA+AGG | 0.454402 | 2_3:+58419885 | None:intergenic |
| TGGTATTACTTATTGGGGTA+TGG | 0.468441 | 2_3:+58421162 | Msa0301870:CDS |
| ATACCAATGCCGTTGAGAGC+TGG | 0.477606 | 2_3:-58421878 | None:intergenic |
| TAGAGCAGAAGTGGGAGCGA+AGG | 0.480120 | 2_3:+58421910 | Msa0301870:CDS |
| ATGCAGTAGTGTGGTACTCT+TGG | 0.490797 | 2_3:+58421198 | Msa0301870:CDS |
| TTTCCAGCTCTCAACGGCAT+TGG | 0.491525 | 2_3:+58421875 | Msa0301870:CDS |
| CTCTATGGTTAGAGCAGAAG+TGG | 0.492584 | 2_3:+58421901 | Msa0301870:CDS |
| GGTGGAAAGGGATTGGGAAA+GGG | 0.496399 | 2_3:+58419906 | Msa0301870:CDS |
| GTGCTTCGTGATAACATTCA+AGG | 0.499787 | 2_3:+58419951 | Msa0301870:CDS |
| AGGTGGAAAGGGATTGGGAA+AGG | 0.506594 | 2_3:+58419905 | Msa0301870:CDS |
| CGTCGTTTGGCACGAAGAGG+AGG | 0.535271 | 2_3:+58419993 | Msa0301870:CDS |
| TGTTGCGAATCAAGATGTCT+GGG | 0.537404 | 2_3:+58419874 | None:intergenic |
| CGTGCCAAACGACGAATAGC+GGG | 0.539788 | 2_3:-58419984 | None:intergenic |
| TGTTATCACGAAGCACCTTA+CGG | 0.542642 | 2_3:-58419944 | None:intergenic |
| CGAATCAAGATGTCTGGGCG+TGG | 0.544605 | 2_3:+58419879 | None:intergenic |
| TGCGATGGTATTACTTATTG+GGG | 0.547304 | 2_3:+58421157 | Msa0301870:CDS |
| TTACTTACACAGAGCACGCT+AGG | 0.553235 | 2_3:+58420099 | Msa0301870:CDS |
| TCTCAACTTACAGAAAGAGT+AGG | 0.556129 | 2_3:-58421250 | None:intergenic |
| GGAAATTTACTCATCACTGT+CGG | 0.559460 | 2_3:-58421857 | None:intergenic |
| TTCACCACGGAAAATCCCGC+TGG | 0.562192 | 2_3:+58422137 | Msa0301870:CDS |
| GTGGCAGCTGAGCTTACAGA+TGG | 0.563128 | 2_3:+58421983 | Msa0301870:CDS |
| AGAGCAGAAGTGGGAGCGAA+GGG | 0.564509 | 2_3:+58421911 | Msa0301870:CDS |
| ATGTCTGGGCGTGGAAAAGG+TGG | 0.568080 | 2_3:+58419888 | Msa0301870:CDS |
| GAGAAAGACTGTTACTGCCA+TGG | 0.575079 | 2_3:+58420121 | Msa0301870:CDS |
| AGGAGCAAAACGACACCGTA+AGG | 0.575994 | 2_3:+58419929 | Msa0301870:CDS |
| GGGCGTGGAAAAGGTGGAAA+GGG | 0.577024 | 2_3:+58419894 | Msa0301870:CDS |
| AGAGTACCACACTACTGCAT+TGG | 0.579336 | 2_3:-58421195 | None:intergenic |
| GGAGAATGTTATTCGTGATG+CGG | 0.582811 | 2_3:+58420076 | Msa0301870:CDS |
| CCAGCAAACTGGAAACCAGC+GGG | 0.592210 | 2_3:-58422152 | None:intergenic |
| AAGGACTCTTTATGGATTTG+GGG | 0.603730 | 2_3:+58420172 | Msa0301870:CDS |
| TCGTGCCAAACGACGAATAG+CGG | 0.606775 | 2_3:-58419985 | None:intergenic |
| AGCTGAGCTTACAGATGGGA+TGG | 0.609398 | 2_3:+58421988 | Msa0301870:CDS |
| GCACACACATTATGTTGCCA+CGG | 0.610699 | 2_3:+58421946 | Msa0301870:CDS |
| AGTAAATTTCCAGCTCTCAA+CGG | 0.614715 | 2_3:+58421869 | Msa0301870:CDS |
| TGGGCGTGGAAAAGGTGGAA+AGG | 0.614761 | 2_3:+58419893 | Msa0301870:CDS |
| CAATGCATAAACAACATCCA+TGG | 0.616974 | 2_3:-58420138 | None:intergenic |
| GGAGGAGTGAAGCGTATCAG+CGG | 0.620100 | 2_3:+58420011 | Msa0301870:CDS |
| ATTCGTCGTTTGGCACGAAG+AGG | 0.624143 | 2_3:+58419990 | Msa0301870:CDS |
| GTGGATGCAGGATGTTGCGA+TGG | 0.626932 | 2_3:+58421142 | Msa0301870:intron |
| GTTTATGCATTGAAGAGACA+AGG | 0.629886 | 2_3:+58420149 | Msa0301870:CDS |
| ATGCATTGAAGAGACAAGGA+AGG | 0.634793 | 2_3:+58420153 | Msa0301870:CDS |
| ACTCTTGGCTTGTGAAACAC+AGG | 0.642689 | 2_3:+58421213 | Msa0301870:CDS |
| AGGACTCTTTATGGATTTGG+GGG | 0.645439 | 2_3:+58420173 | Msa0301870:CDS |
| TAAAGACCAATGCAGTAGTG+TGG | 0.659395 | 2_3:+58421189 | Msa0301870:CDS |
| AAATTTACTCATCACTGTCG+GGG | 0.668930 | 2_3:-58421855 | None:intergenic |
| TCTATGGTTAGAGCAGAAGT+GGG | 0.683139 | 2_3:+58421902 | Msa0301870:CDS |
| GCCAGCAAACTGGAAACCAG+CGG | 0.684986 | 2_3:-58422153 | None:intergenic |
| CAACTCTGGTGCCAGAACAG+CGG | 0.696690 | 2_3:+58422100 | Msa0301870:intron |
| TTGATCTACGAAGAGACACG+TGG | 0.703849 | 2_3:+58420035 | Msa0301870:CDS |
| TGGCAGCTGAGCTTACAGAT+GGG | 0.743469 | 2_3:+58421984 | Msa0301870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTATTATAAGTGATTA+TGG | + | chr2_3:58420233-58420252 | Msa0301870:intron | 10.0% |
| !! | TTATTATTATAAGTGATTAT+GGG | + | chr2_3:58420234-58420253 | Msa0301870:intron | 10.0% |
| !! | TTTATTATTATAAGTGATTA+TGG | + | chr2_3:58420233-58420252 | Msa0301870:intron | 10.0% |
| !! | TTATTATTATAAGTGATTAT+GGG | + | chr2_3:58420234-58420253 | Msa0301870:intron | 10.0% |
| !! | AATTTAATATTGAATAATGC+TGG | + | chr2_3:58421048-58421067 | Msa0301870:intron | 15.0% |
| !! | AATTTAATATTGAATAATGC+TGG | + | chr2_3:58421048-58421067 | Msa0301870:intron | 15.0% |
| !!! | ATTCAATATCATTTTGTCTA+TGG | + | chr2_3:58420428-58420447 | Msa0301870:intron | 20.0% |
| !! | AACATTTCAATACTAAAGAT+TGG | - | chr2_3:58420673-58420692 | None:intergenic | 20.0% |
| !! | AAAAATTGGAAATATTGCAT+TGG | - | chr2_3:58420779-58420798 | None:intergenic | 20.0% |
| !! | TTTGAAAAAACTATTAAAGC+TGG | + | chr2_3:58422028-58422047 | Msa0301870:intron | 20.0% |
| !!! | ATTCAATATCATTTTGTCTA+TGG | + | chr2_3:58420428-58420447 | Msa0301870:intron | 20.0% |
| !! | AACATTTCAATACTAAAGAT+TGG | - | chr2_3:58420673-58420692 | None:intergenic | 20.0% |
| !! | AAAAATTGGAAATATTGCAT+TGG | - | chr2_3:58420779-58420798 | None:intergenic | 20.0% |
| !! | TTTGAAAAAACTATTAAAGC+TGG | + | chr2_3:58422028-58422047 | Msa0301870:intron | 20.0% |
| ! | TATTATAAGTGATTATGGGT+TGG | + | chr2_3:58420238-58420257 | Msa0301870:intron | 25.0% |
| ! | ATTATAAGTGATTATGGGTT+GGG | + | chr2_3:58420239-58420258 | Msa0301870:intron | 25.0% |
| !! | TTTTTCTACGGTAAGAATTT+AGG | + | chr2_3:58420317-58420336 | Msa0301870:intron | 25.0% |
| !! | GAGTAATTATCTTTTGTGAT+AGG | + | chr2_3:58420339-58420358 | Msa0301870:intron | 25.0% |
| ! | ACATCTTAAAATTCAATTGC+AGG | - | chr2_3:58420490-58420509 | None:intergenic | 25.0% |
| !! | ATTTTCAAAGTCGTTGTTAA+CGG | + | chr2_3:58420514-58420533 | Msa0301870:intron | 25.0% |
| ! | AATACTCACAACAATTTGAT+AGG | - | chr2_3:58420586-58420605 | None:intergenic | 25.0% |
| ! | TTCCATATATGACAAATTGA+GGG | - | chr2_3:58420633-58420652 | None:intergenic | 25.0% |
| ! | ATTCCATATATGACAAATTG+AGG | - | chr2_3:58420634-58420653 | None:intergenic | 25.0% |
| ! | AAACTAAAACCTAAAACATC+AGG | - | chr2_3:58420715-58420734 | None:intergenic | 25.0% |
| ! | TGCAGATTTCTTAGAAAAAT+TGG | - | chr2_3:58420793-58420812 | None:intergenic | 25.0% |
| ! | TTGTTCAGCTATAAATTTCA+CGG | + | chr2_3:58421459-58421478 | Msa0301870:intron | 25.0% |
| ! | AAAATTGAATATGCTAACAG+AGG | - | chr2_3:58421485-58421504 | None:intergenic | 25.0% |
| ! | AATTGAATGTACGATAAGAA+AGG | - | chr2_3:58421549-58421568 | None:intergenic | 25.0% |
| ! | ATTTAACCATGCAACATTTA+TGG | + | chr2_3:58421578-58421597 | Msa0301870:intron | 25.0% |
| ! | TATTATAAGTGATTATGGGT+TGG | + | chr2_3:58420238-58420257 | Msa0301870:intron | 25.0% |
| ! | ATTATAAGTGATTATGGGTT+GGG | + | chr2_3:58420239-58420258 | Msa0301870:intron | 25.0% |
| !! | TTTTTCTACGGTAAGAATTT+AGG | + | chr2_3:58420317-58420336 | Msa0301870:intron | 25.0% |
| !! | GAGTAATTATCTTTTGTGAT+AGG | + | chr2_3:58420339-58420358 | Msa0301870:intron | 25.0% |
| ! | ACATCTTAAAATTCAATTGC+AGG | - | chr2_3:58420490-58420509 | None:intergenic | 25.0% |
| !! | ATTTTCAAAGTCGTTGTTAA+CGG | + | chr2_3:58420514-58420533 | Msa0301870:intron | 25.0% |
| ! | AATACTCACAACAATTTGAT+AGG | - | chr2_3:58420586-58420605 | None:intergenic | 25.0% |
| ! | TTCCATATATGACAAATTGA+GGG | - | chr2_3:58420633-58420652 | None:intergenic | 25.0% |
| ! | ATTCCATATATGACAAATTG+AGG | - | chr2_3:58420634-58420653 | None:intergenic | 25.0% |
| ! | AAACTAAAACCTAAAACATC+AGG | - | chr2_3:58420715-58420734 | None:intergenic | 25.0% |
| ! | TGCAGATTTCTTAGAAAAAT+TGG | - | chr2_3:58420793-58420812 | None:intergenic | 25.0% |
| ! | TTGTTCAGCTATAAATTTCA+CGG | + | chr2_3:58421459-58421478 | Msa0301870:intron | 25.0% |
| ! | AAAATTGAATATGCTAACAG+AGG | - | chr2_3:58421485-58421504 | None:intergenic | 25.0% |
| ! | AATTGAATGTACGATAAGAA+AGG | - | chr2_3:58421549-58421568 | None:intergenic | 25.0% |
| ! | ATTTAACCATGCAACATTTA+TGG | + | chr2_3:58421578-58421597 | Msa0301870:intron | 25.0% |
| ! | ATTTAGGTGGTGTTTTTCTA+CGG | + | chr2_3:58420305-58420324 | Msa0301870:intron | 30.0% |
| ATAGGTAGTTAACTGTTTCA+TGG | + | chr2_3:58420357-58420376 | Msa0301870:intron | 30.0% | |
| TTAAAATTCAATTGCAGGCT+TGG | - | chr2_3:58420485-58420504 | None:intergenic | 30.0% | |
| ACAATTTGATAGGCGATATT+AGG | - | chr2_3:58420576-58420595 | None:intergenic | 30.0% | |
| AACCCTCAATTTGTCATATA+TGG | + | chr2_3:58420628-58420647 | Msa0301870:intron | 30.0% | |
| ! | ATTGGAAATATTGCATTGGT+TGG | - | chr2_3:58420775-58420794 | None:intergenic | 30.0% |
| CAAATACTATGTGATTGATG+AGG | + | chr2_3:58420829-58420848 | Msa0301870:intron | 30.0% | |
| ATTGATGAGGATGTTATTGT+GGG | + | chr2_3:58420842-58420861 | Msa0301870:intron | 30.0% | |
| TCACAACTGAAGATGTTTAA+AGG | - | chr2_3:58420870-58420889 | None:intergenic | 30.0% | |
| ! | AGTTATGACCAACTAGATTT+TGG | + | chr2_3:58420895-58420914 | Msa0301870:intron | 30.0% |
| ! | GTTATGACCAACTAGATTTT+GGG | + | chr2_3:58420896-58420915 | Msa0301870:intron | 30.0% |
| AGATTTCTAAATTCTCCAGA+TGG | - | chr2_3:58420973-58420992 | None:intergenic | 30.0% | |
| ATCTGGAGAATTTAGAAATC+TGG | + | chr2_3:58420972-58420991 | Msa0301870:intron | 30.0% | |
| TCTGGAGAATTTAGAAATCT+GGG | + | chr2_3:58420973-58420992 | Msa0301870:intron | 30.0% | |
| ! | TTAAGTTGTCTTCTTGAAGT+AGG | + | chr2_3:58420996-58421015 | Msa0301870:intron | 30.0% |
| ! | TGTTTGGAATTATGTCTTTG+TGG | + | chr2_3:58421123-58421142 | Msa0301870:intron | 30.0% |
| TTGCGATGGTATTACTTATT+GGG | + | chr2_3:58421156-58421175 | Msa0301870:CDS | 30.0% | |
| ! | TTTCTGTAAGTTGAGAAAAG+TGG | + | chr2_3:58421257-58421276 | Msa0301870:intron | 30.0% |
| AAGTTGAGAAAAGTGGAATT+TGG | + | chr2_3:58421264-58421283 | Msa0301870:intron | 30.0% | |
| ! | ACAAATTTTCTGTGTAAGAG+AGG | - | chr2_3:58421443-58421462 | None:intergenic | 30.0% |
| TTTACATGCATAACCAGAAA+GGG | - | chr2_3:58421743-58421762 | None:intergenic | 30.0% | |
| AAGTGAAATCATTGACAATC+AGG | - | chr2_3:58421777-58421796 | None:intergenic | 30.0% | |
| !!! | GTCAATGATTTCACTTTTTC+TGG | + | chr2_3:58421781-58421800 | Msa0301870:intron | 30.0% |
| GACATTGTTGAATGATTCAA+TGG | - | chr2_3:58421828-58421847 | None:intergenic | 30.0% | |
| AAACTATTAAAGCTGGAGAA+TGG | + | chr2_3:58422035-58422054 | Msa0301870:intron | 30.0% | |
| GATGTTATTGTGTTTCCTAA+AGG | + | chr2_3:58422059-58422078 | Msa0301870:intron | 30.0% | |
| ! | ATTTAGGTGGTGTTTTTCTA+CGG | + | chr2_3:58420305-58420324 | Msa0301870:intron | 30.0% |
| ATAGGTAGTTAACTGTTTCA+TGG | + | chr2_3:58420357-58420376 | Msa0301870:intron | 30.0% | |
| TTAAAATTCAATTGCAGGCT+TGG | - | chr2_3:58420485-58420504 | None:intergenic | 30.0% | |
| ACAATTTGATAGGCGATATT+AGG | - | chr2_3:58420576-58420595 | None:intergenic | 30.0% | |
| AACCCTCAATTTGTCATATA+TGG | + | chr2_3:58420628-58420647 | Msa0301870:intron | 30.0% | |
| ! | ATTGGAAATATTGCATTGGT+TGG | - | chr2_3:58420775-58420794 | None:intergenic | 30.0% |
| CAAATACTATGTGATTGATG+AGG | + | chr2_3:58420829-58420848 | Msa0301870:intron | 30.0% | |
| ATTGATGAGGATGTTATTGT+GGG | + | chr2_3:58420842-58420861 | Msa0301870:intron | 30.0% | |
| TCACAACTGAAGATGTTTAA+AGG | - | chr2_3:58420870-58420889 | None:intergenic | 30.0% | |
| ! | AGTTATGACCAACTAGATTT+TGG | + | chr2_3:58420895-58420914 | Msa0301870:intron | 30.0% |
| ! | GTTATGACCAACTAGATTTT+GGG | + | chr2_3:58420896-58420915 | Msa0301870:intron | 30.0% |
| AGATTTCTAAATTCTCCAGA+TGG | - | chr2_3:58420973-58420992 | None:intergenic | 30.0% | |
| ATCTGGAGAATTTAGAAATC+TGG | + | chr2_3:58420972-58420991 | Msa0301870:intron | 30.0% | |
| TCTGGAGAATTTAGAAATCT+GGG | + | chr2_3:58420973-58420992 | Msa0301870:intron | 30.0% | |
| ! | TTAAGTTGTCTTCTTGAAGT+AGG | + | chr2_3:58420996-58421015 | Msa0301870:intron | 30.0% |
| ! | TGTTTGGAATTATGTCTTTG+TGG | + | chr2_3:58421123-58421142 | Msa0301870:intron | 30.0% |
| TTGCGATGGTATTACTTATT+GGG | + | chr2_3:58421156-58421175 | Msa0301870:CDS | 30.0% | |
| ! | TTTCTGTAAGTTGAGAAAAG+TGG | + | chr2_3:58421257-58421276 | Msa0301870:intron | 30.0% |
| AAGTTGAGAAAAGTGGAATT+TGG | + | chr2_3:58421264-58421283 | Msa0301870:intron | 30.0% | |
| ! | ACAAATTTTCTGTGTAAGAG+AGG | - | chr2_3:58421443-58421462 | None:intergenic | 30.0% |
| TTTACATGCATAACCAGAAA+GGG | - | chr2_3:58421743-58421762 | None:intergenic | 30.0% | |
| AAGTGAAATCATTGACAATC+AGG | - | chr2_3:58421777-58421796 | None:intergenic | 30.0% | |
| !!! | GTCAATGATTTCACTTTTTC+TGG | + | chr2_3:58421781-58421800 | Msa0301870:intron | 30.0% |
| GACATTGTTGAATGATTCAA+TGG | - | chr2_3:58421828-58421847 | None:intergenic | 30.0% | |
| AAACTATTAAAGCTGGAGAA+TGG | + | chr2_3:58422035-58422054 | Msa0301870:intron | 30.0% | |
| GATGTTATTGTGTTTCCTAA+AGG | + | chr2_3:58422059-58422078 | Msa0301870:intron | 30.0% | |
| CAATGCATAAACAACATCCA+TGG | - | chr2_3:58420141-58420160 | None:intergenic | 35.0% | |
| GTTTATGCATTGAAGAGACA+AGG | + | chr2_3:58420149-58420168 | Msa0301870:CDS | 35.0% | |
| GAAGGACTCTTTATGGATTT+GGG | + | chr2_3:58420171-58420190 | Msa0301870:CDS | 35.0% | |
| AAGGACTCTTTATGGATTTG+GGG | + | chr2_3:58420172-58420191 | Msa0301870:CDS | 35.0% | |
| !! | GTCTTGCTGTCAAGAAATTT+TGG | + | chr2_3:58420266-58420285 | Msa0301870:intron | 35.0% |
| !! | AGAAATTTTGGCAAGGTTTG+TGG | + | chr2_3:58420278-58420297 | Msa0301870:intron | 35.0% |
| CAAGGTTTGTGGTTGAATTT+AGG | + | chr2_3:58420289-58420308 | Msa0301870:intron | 35.0% | |
| GATTGATGAGGATGTTATTG+TGG | + | chr2_3:58420841-58420860 | Msa0301870:intron | 35.0% | |
| TCTCCAGATGGAAAAACATA+CGG | - | chr2_3:58420961-58420980 | None:intergenic | 35.0% | |
| CTGCAGTAAATTGATCCAAT+GGG | - | chr2_3:58421082-58421101 | None:intergenic | 35.0% | |
| ACATAATTCCAAACAGACAG+GGG | - | chr2_3:58421118-58421137 | None:intergenic | 35.0% | |
| GACATAATTCCAAACAGACA+GGG | - | chr2_3:58421119-58421138 | None:intergenic | 35.0% | |
| AGACATAATTCCAAACAGAC+AGG | - | chr2_3:58421120-58421139 | None:intergenic | 35.0% | |
| AATTATGTCTTTGTGGATGC+AGG | + | chr2_3:58421130-58421149 | Msa0301870:intron | 35.0% | |
| GTTGCGATGGTATTACTTAT+TGG | + | chr2_3:58421155-58421174 | Msa0301870:CDS | 35.0% | |
| TGCGATGGTATTACTTATTG+GGG | + | chr2_3:58421157-58421176 | Msa0301870:CDS | 35.0% | |
| TGGTATTACTTATTGGGGTA+TGG | + | chr2_3:58421162-58421181 | Msa0301870:CDS | 35.0% | |
| TCTCAACTTACAGAAAGAGT+AGG | - | chr2_3:58421253-58421272 | None:intergenic | 35.0% | |
| ! | AACGTGTGAGTTTTTCTACT+AGG | + | chr2_3:58421342-58421361 | Msa0301870:intron | 35.0% |
| AGAATATGATGAGGATACTG+AGG | - | chr2_3:58421415-58421434 | None:intergenic | 35.0% | |
| AACCATGCAACATTTATGGA+AGG | + | chr2_3:58421582-58421601 | Msa0301870:intron | 35.0% | |
| ATCCTTCCATAAATGTTGCA+TGG | - | chr2_3:58421587-58421606 | None:intergenic | 35.0% | |
| TGCATATCTCAATCTTCAAG+AGG | - | chr2_3:58421657-58421676 | None:intergenic | 35.0% | |
| TTACATGCATAACCAGAAAG+GGG | - | chr2_3:58421742-58421761 | None:intergenic | 35.0% | |
| GTTTACATGCATAACCAGAA+AGG | - | chr2_3:58421744-58421763 | None:intergenic | 35.0% | |
| ! | TTGACAATCAGGTTTTCAGT+TGG | - | chr2_3:58421766-58421785 | None:intergenic | 35.0% |
| AAATTTACTCATCACTGTCG+GGG | - | chr2_3:58421858-58421877 | None:intergenic | 35.0% | |
| GAAATTTACTCATCACTGTC+GGG | - | chr2_3:58421859-58421878 | None:intergenic | 35.0% | |
| GGAAATTTACTCATCACTGT+CGG | - | chr2_3:58421860-58421879 | None:intergenic | 35.0% | |
| AGTAAATTTCCAGCTCTCAA+CGG | + | chr2_3:58421869-58421888 | Msa0301870:CDS | 35.0% | |
| CAATGCATAAACAACATCCA+TGG | - | chr2_3:58420141-58420160 | None:intergenic | 35.0% | |
| GTTTATGCATTGAAGAGACA+AGG | + | chr2_3:58420149-58420168 | Msa0301870:CDS | 35.0% | |
| GAAGGACTCTTTATGGATTT+GGG | + | chr2_3:58420171-58420190 | Msa0301870:CDS | 35.0% | |
| AAGGACTCTTTATGGATTTG+GGG | + | chr2_3:58420172-58420191 | Msa0301870:CDS | 35.0% | |
| !! | GTCTTGCTGTCAAGAAATTT+TGG | + | chr2_3:58420266-58420285 | Msa0301870:intron | 35.0% |
| !! | AGAAATTTTGGCAAGGTTTG+TGG | + | chr2_3:58420278-58420297 | Msa0301870:intron | 35.0% |
| CAAGGTTTGTGGTTGAATTT+AGG | + | chr2_3:58420289-58420308 | Msa0301870:intron | 35.0% | |
| GATTGATGAGGATGTTATTG+TGG | + | chr2_3:58420841-58420860 | Msa0301870:intron | 35.0% | |
| TCTCCAGATGGAAAAACATA+CGG | - | chr2_3:58420961-58420980 | None:intergenic | 35.0% | |
| CTGCAGTAAATTGATCCAAT+GGG | - | chr2_3:58421082-58421101 | None:intergenic | 35.0% | |
| ACATAATTCCAAACAGACAG+GGG | - | chr2_3:58421118-58421137 | None:intergenic | 35.0% | |
| GACATAATTCCAAACAGACA+GGG | - | chr2_3:58421119-58421138 | None:intergenic | 35.0% | |
| AGACATAATTCCAAACAGAC+AGG | - | chr2_3:58421120-58421139 | None:intergenic | 35.0% | |
| AATTATGTCTTTGTGGATGC+AGG | + | chr2_3:58421130-58421149 | Msa0301870:intron | 35.0% | |
| GTTGCGATGGTATTACTTAT+TGG | + | chr2_3:58421155-58421174 | Msa0301870:CDS | 35.0% | |
| TGCGATGGTATTACTTATTG+GGG | + | chr2_3:58421157-58421176 | Msa0301870:CDS | 35.0% | |
| TGGTATTACTTATTGGGGTA+TGG | + | chr2_3:58421162-58421181 | Msa0301870:CDS | 35.0% | |
| TCTCAACTTACAGAAAGAGT+AGG | - | chr2_3:58421253-58421272 | None:intergenic | 35.0% | |
| ! | AACGTGTGAGTTTTTCTACT+AGG | + | chr2_3:58421342-58421361 | Msa0301870:intron | 35.0% |
| AGAATATGATGAGGATACTG+AGG | - | chr2_3:58421415-58421434 | None:intergenic | 35.0% | |
| AACCATGCAACATTTATGGA+AGG | + | chr2_3:58421582-58421601 | Msa0301870:intron | 35.0% | |
| ATCCTTCCATAAATGTTGCA+TGG | - | chr2_3:58421587-58421606 | None:intergenic | 35.0% | |
| TGCATATCTCAATCTTCAAG+AGG | - | chr2_3:58421657-58421676 | None:intergenic | 35.0% | |
| TTACATGCATAACCAGAAAG+GGG | - | chr2_3:58421742-58421761 | None:intergenic | 35.0% | |
| GTTTACATGCATAACCAGAA+AGG | - | chr2_3:58421744-58421763 | None:intergenic | 35.0% | |
| ! | TTGACAATCAGGTTTTCAGT+TGG | - | chr2_3:58421766-58421785 | None:intergenic | 35.0% |
| AAATTTACTCATCACTGTCG+GGG | - | chr2_3:58421858-58421877 | None:intergenic | 35.0% | |
| GAAATTTACTCATCACTGTC+GGG | - | chr2_3:58421859-58421878 | None:intergenic | 35.0% | |
| GGAAATTTACTCATCACTGT+CGG | - | chr2_3:58421860-58421879 | None:intergenic | 35.0% | |
| AGTAAATTTCCAGCTCTCAA+CGG | + | chr2_3:58421869-58421888 | Msa0301870:CDS | 35.0% | |
| ! | TGTTATCACGAAGCACCTTA+CGG | - | chr2_3:58419947-58419966 | None:intergenic | 40.0% |
| GTGCTTCGTGATAACATTCA+AGG | + | chr2_3:58419951-58419970 | Msa0301870:CDS | 40.0% | |
| ! | TGGCGTGTTGAAGATCTTTT+TGG | + | chr2_3:58420055-58420074 | Msa0301870:CDS | 40.0% |
| GGAGAATGTTATTCGTGATG+CGG | + | chr2_3:58420076-58420095 | Msa0301870:CDS | 40.0% | |
| ATGCATTGAAGAGACAAGGA+AGG | + | chr2_3:58420153-58420172 | Msa0301870:CDS | 40.0% | |
| AGACAAGGAAGGACTCTTTA+TGG | + | chr2_3:58420164-58420183 | Msa0301870:CDS | 40.0% | |
| GGAAGGACTCTTTATGGATT+TGG | + | chr2_3:58420170-58420189 | Msa0301870:CDS | 40.0% | |
| AGGACTCTTTATGGATTTGG+GGG | + | chr2_3:58420173-58420192 | Msa0301870:CDS | 40.0% | |
| TCTTTATGGATTTGGGGGTT+AGG | + | chr2_3:58420178-58420197 | Msa0301870:intron | 40.0% | |
| CTTTATGGATTTGGGGGTTA+GGG | + | chr2_3:58420179-58420198 | Msa0301870:intron | 40.0% | |
| !! | GCTGTCAAGAAATTTTGGCA+AGG | + | chr2_3:58420271-58420290 | Msa0301870:intron | 40.0% |
| GGTTTGTGGTTGAATTTAGG+TGG | + | chr2_3:58420292-58420311 | Msa0301870:intron | 40.0% | |
| TTGATAGGCGATATTAGGCT+TGG | - | chr2_3:58420571-58420590 | None:intergenic | 40.0% | |
| ! | CTGTCAACTCCTGATGTTTT+AGG | + | chr2_3:58420703-58420722 | Msa0301870:intron | 40.0% |
| !! | AAGAGCACCCAAAATCTAGT+TGG | - | chr2_3:58420906-58420925 | None:intergenic | 40.0% |
| ! | ATCCCGTATGTTTTTCCATC+TGG | + | chr2_3:58420955-58420974 | Msa0301870:intron | 40.0% |
| CTCCAGATGGAAAAACATAC+GGG | - | chr2_3:58420960-58420979 | None:intergenic | 40.0% | |
| AGTTGTCTTCTTGAAGTAGG+TGG | + | chr2_3:58420999-58421018 | Msa0301870:intron | 40.0% | |
| ATGCTGGAAAACTATCCCAT+TGG | + | chr2_3:58421064-58421083 | Msa0301870:intron | 40.0% | |
| GCTGCAGTAAATTGATCCAA+TGG | - | chr2_3:58421083-58421102 | None:intergenic | 40.0% | |
| TAAAGACCAATGCAGTAGTG+TGG | + | chr2_3:58421189-58421208 | Msa0301870:CDS | 40.0% | |
| ! | ATTTTCTGTGTAAGAGAGGC+AGG | - | chr2_3:58421439-58421458 | None:intergenic | 40.0% |
| ! | TTTGCGAAGGTTGATCGAAT+AGG | - | chr2_3:58421526-58421545 | None:intergenic | 40.0% |
| ACGATAAGAAAGGTTTGCGA+AGG | - | chr2_3:58421539-58421558 | None:intergenic | 40.0% | |
| TCTATGGTTAGAGCAGAAGT+GGG | + | chr2_3:58421902-58421921 | Msa0301870:CDS | 40.0% | |
| ! | TGCCACGGAATTTTTGATCA+TGG | + | chr2_3:58421961-58421980 | Msa0301870:CDS | 40.0% |
| CACCATGATCAAAAATTCCG+TGG | - | chr2_3:58421966-58421985 | None:intergenic | 40.0% | |
| ! | CACGGAATTTTTGATCATGG+TGG | + | chr2_3:58421964-58421983 | Msa0301870:CDS | 40.0% |
| !!! | TGCTTTTTCAGCTTTCACCA+CGG | + | chr2_3:58422124-58422143 | Msa0301870:CDS | 40.0% |
| !! | GTCTTTTGAGTAACAGTGGA+GGG | - | chr2_3:58422188-58422207 | None:intergenic | 40.0% |
| !! | TGTCTTTTGAGTAACAGTGG+AGG | - | chr2_3:58422189-58422208 | None:intergenic | 40.0% |
| !! | AGCTGTCTTTTGAGTAACAG+TGG | - | chr2_3:58422192-58422211 | None:intergenic | 40.0% |
| ! | TGTTATCACGAAGCACCTTA+CGG | - | chr2_3:58419947-58419966 | None:intergenic | 40.0% |
| GTGCTTCGTGATAACATTCA+AGG | + | chr2_3:58419951-58419970 | Msa0301870:CDS | 40.0% | |
| ! | TGGCGTGTTGAAGATCTTTT+TGG | + | chr2_3:58420055-58420074 | Msa0301870:CDS | 40.0% |
| GGAGAATGTTATTCGTGATG+CGG | + | chr2_3:58420076-58420095 | Msa0301870:CDS | 40.0% | |
| ATGCATTGAAGAGACAAGGA+AGG | + | chr2_3:58420153-58420172 | Msa0301870:CDS | 40.0% | |
| AGACAAGGAAGGACTCTTTA+TGG | + | chr2_3:58420164-58420183 | Msa0301870:CDS | 40.0% | |
| GGAAGGACTCTTTATGGATT+TGG | + | chr2_3:58420170-58420189 | Msa0301870:CDS | 40.0% | |
| AGGACTCTTTATGGATTTGG+GGG | + | chr2_3:58420173-58420192 | Msa0301870:CDS | 40.0% | |
| TCTTTATGGATTTGGGGGTT+AGG | + | chr2_3:58420178-58420197 | Msa0301870:intron | 40.0% | |
| CTTTATGGATTTGGGGGTTA+GGG | + | chr2_3:58420179-58420198 | Msa0301870:intron | 40.0% | |
| !! | GCTGTCAAGAAATTTTGGCA+AGG | + | chr2_3:58420271-58420290 | Msa0301870:intron | 40.0% |
| GGTTTGTGGTTGAATTTAGG+TGG | + | chr2_3:58420292-58420311 | Msa0301870:intron | 40.0% | |
| TTGATAGGCGATATTAGGCT+TGG | - | chr2_3:58420571-58420590 | None:intergenic | 40.0% | |
| ! | CTGTCAACTCCTGATGTTTT+AGG | + | chr2_3:58420703-58420722 | Msa0301870:intron | 40.0% |
| !! | AAGAGCACCCAAAATCTAGT+TGG | - | chr2_3:58420906-58420925 | None:intergenic | 40.0% |
| ! | ATCCCGTATGTTTTTCCATC+TGG | + | chr2_3:58420955-58420974 | Msa0301870:intron | 40.0% |
| CTCCAGATGGAAAAACATAC+GGG | - | chr2_3:58420960-58420979 | None:intergenic | 40.0% | |
| AGTTGTCTTCTTGAAGTAGG+TGG | + | chr2_3:58420999-58421018 | Msa0301870:intron | 40.0% | |
| ATGCTGGAAAACTATCCCAT+TGG | + | chr2_3:58421064-58421083 | Msa0301870:intron | 40.0% | |
| GCTGCAGTAAATTGATCCAA+TGG | - | chr2_3:58421083-58421102 | None:intergenic | 40.0% | |
| TAAAGACCAATGCAGTAGTG+TGG | + | chr2_3:58421189-58421208 | Msa0301870:CDS | 40.0% | |
| ! | ATTTTCTGTGTAAGAGAGGC+AGG | - | chr2_3:58421439-58421458 | None:intergenic | 40.0% |
| ! | TTTGCGAAGGTTGATCGAAT+AGG | - | chr2_3:58421526-58421545 | None:intergenic | 40.0% |
| ACGATAAGAAAGGTTTGCGA+AGG | - | chr2_3:58421539-58421558 | None:intergenic | 40.0% | |
| TCTATGGTTAGAGCAGAAGT+GGG | + | chr2_3:58421902-58421921 | Msa0301870:CDS | 40.0% | |
| ! | TGCCACGGAATTTTTGATCA+TGG | + | chr2_3:58421961-58421980 | Msa0301870:CDS | 40.0% |
| CACCATGATCAAAAATTCCG+TGG | - | chr2_3:58421966-58421985 | None:intergenic | 40.0% | |
| ! | CACGGAATTTTTGATCATGG+TGG | + | chr2_3:58421964-58421983 | Msa0301870:CDS | 40.0% |
| !!! | TGCTTTTTCAGCTTTCACCA+CGG | + | chr2_3:58422124-58422143 | Msa0301870:CDS | 40.0% |
| !! | GTCTTTTGAGTAACAGTGGA+GGG | - | chr2_3:58422188-58422207 | None:intergenic | 40.0% |
| !! | TGTCTTTTGAGTAACAGTGG+AGG | - | chr2_3:58422189-58422208 | None:intergenic | 40.0% |
| !! | AGCTGTCTTTTGAGTAACAG+TGG | - | chr2_3:58422192-58422211 | None:intergenic | 40.0% |
| TGGAAAAGGTGGAAAGGGAT+TGG | + | chr2_3:58419899-58419918 | Msa0301870:CDS | 45.0% | |
| GGAAAAGGTGGAAAGGGATT+GGG | + | chr2_3:58419900-58419919 | Msa0301870:CDS | 45.0% | |
| TTGATCTACGAAGAGACACG+TGG | + | chr2_3:58420035-58420054 | Msa0301870:CDS | 45.0% | |
| TTACTTACACAGAGCACGCT+AGG | + | chr2_3:58420099-58420118 | Msa0301870:CDS | 45.0% | |
| GAGAAAGACTGTTACTGCCA+TGG | + | chr2_3:58420121-58420140 | Msa0301870:CDS | 45.0% | |
| ! | AGAGTACCACACTACTGCAT+TGG | - | chr2_3:58421198-58421217 | None:intergenic | 45.0% |
| ATGCAGTAGTGTGGTACTCT+TGG | + | chr2_3:58421198-58421217 | Msa0301870:CDS | 45.0% | |
| !! | ACTCTTGGCTTGTGAAACAC+AGG | + | chr2_3:58421213-58421232 | Msa0301870:CDS | 45.0% |
| GGAATTTGGAGAAATGCTGC+AGG | + | chr2_3:58421278-58421297 | Msa0301870:intron | 45.0% | |
| !! | TTCTGGGACTGTAACAGTGT+TGG | - | chr2_3:58421719-58421738 | None:intergenic | 45.0% |
| CATAACCAGAAAGGGGTTCT+GGG | - | chr2_3:58421735-58421754 | None:intergenic | 45.0% | |
| !! | CAACGGCATTGGTATCTCTA+TGG | + | chr2_3:58421886-58421905 | Msa0301870:CDS | 45.0% |
| CTCTATGGTTAGAGCAGAAG+TGG | + | chr2_3:58421901-58421920 | Msa0301870:CDS | 45.0% | |
| GCACACACATTATGTTGCCA+CGG | + | chr2_3:58421946-58421965 | Msa0301870:CDS | 45.0% | |
| AGGAAATGCACGCATCCTTT+AGG | - | chr2_3:58422077-58422096 | None:intergenic | 45.0% | |
| GTGCATTTCCTTGTCAACTC+TGG | + | chr2_3:58422086-58422105 | Msa0301870:intron | 45.0% | |
| TGAAAAAGCAACCGCTGTTC+TGG | - | chr2_3:58422114-58422133 | None:intergenic | 45.0% | |
| TTGAGTAACAGTGGAGGGTT+TGG | - | chr2_3:58422183-58422202 | None:intergenic | 45.0% | |
| TGGAAAAGGTGGAAAGGGAT+TGG | + | chr2_3:58419899-58419918 | Msa0301870:CDS | 45.0% | |
| GGAAAAGGTGGAAAGGGATT+GGG | + | chr2_3:58419900-58419919 | Msa0301870:CDS | 45.0% | |
| TTGATCTACGAAGAGACACG+TGG | + | chr2_3:58420035-58420054 | Msa0301870:CDS | 45.0% | |
| TTACTTACACAGAGCACGCT+AGG | + | chr2_3:58420099-58420118 | Msa0301870:CDS | 45.0% | |
| GAGAAAGACTGTTACTGCCA+TGG | + | chr2_3:58420121-58420140 | Msa0301870:CDS | 45.0% | |
| ! | AGAGTACCACACTACTGCAT+TGG | - | chr2_3:58421198-58421217 | None:intergenic | 45.0% |
| ATGCAGTAGTGTGGTACTCT+TGG | + | chr2_3:58421198-58421217 | Msa0301870:CDS | 45.0% | |
| !! | ACTCTTGGCTTGTGAAACAC+AGG | + | chr2_3:58421213-58421232 | Msa0301870:CDS | 45.0% |
| GGAATTTGGAGAAATGCTGC+AGG | + | chr2_3:58421278-58421297 | Msa0301870:intron | 45.0% | |
| !! | TTCTGGGACTGTAACAGTGT+TGG | - | chr2_3:58421719-58421738 | None:intergenic | 45.0% |
| CATAACCAGAAAGGGGTTCT+GGG | - | chr2_3:58421735-58421754 | None:intergenic | 45.0% | |
| !! | CAACGGCATTGGTATCTCTA+TGG | + | chr2_3:58421886-58421905 | Msa0301870:CDS | 45.0% |
| CTCTATGGTTAGAGCAGAAG+TGG | + | chr2_3:58421901-58421920 | Msa0301870:CDS | 45.0% | |
| GCACACACATTATGTTGCCA+CGG | + | chr2_3:58421946-58421965 | Msa0301870:CDS | 45.0% | |
| AGGAAATGCACGCATCCTTT+AGG | - | chr2_3:58422077-58422096 | None:intergenic | 45.0% | |
| GTGCATTTCCTTGTCAACTC+TGG | + | chr2_3:58422086-58422105 | Msa0301870:intron | 45.0% | |
| TGAAAAAGCAACCGCTGTTC+TGG | - | chr2_3:58422114-58422133 | None:intergenic | 45.0% | |
| TTGAGTAACAGTGGAGGGTT+TGG | - | chr2_3:58422183-58422202 | None:intergenic | 45.0% | |
| AGGTGGAAAGGGATTGGGAA+AGG | + | chr2_3:58419905-58419924 | Msa0301870:CDS | 50.0% | |
| GGTGGAAAGGGATTGGGAAA+GGG | + | chr2_3:58419906-58419925 | Msa0301870:CDS | 50.0% | |
| AGGAGCAAAACGACACCGTA+AGG | + | chr2_3:58419929-58419948 | Msa0301870:CDS | 50.0% | |
| GAAACCCGCTATTCGTCGTT+TGG | + | chr2_3:58419980-58419999 | Msa0301870:CDS | 50.0% | |
| TCGTGCCAAACGACGAATAG+CGG | - | chr2_3:58419988-58420007 | None:intergenic | 50.0% | |
| ATTCGTCGTTTGGCACGAAG+AGG | + | chr2_3:58419990-58420009 | Msa0301870:CDS | 50.0% | |
| GTCGTTGTTAACGGCTTCTC+TGG | + | chr2_3:58420523-58420542 | Msa0301870:intron | 50.0% | |
| TCCAGAAACCCCTGTCTGTT+TGG | + | chr2_3:58421107-58421126 | Msa0301870:intron | 50.0% | |
| TCCAAACAGACAGGGGTTTC+TGG | - | chr2_3:58421111-58421130 | None:intergenic | 50.0% | |
| GAGGCAGGCAGAATATGATG+AGG | - | chr2_3:58421424-58421443 | None:intergenic | 50.0% | |
| GCATAACCAGAAAGGGGTTC+TGG | - | chr2_3:58421736-58421755 | None:intergenic | 50.0% | |
| TTTCCAGCTCTCAACGGCAT+TGG | + | chr2_3:58421875-58421894 | Msa0301870:CDS | 50.0% | |
| ATACCAATGCCGTTGAGAGC+TGG | - | chr2_3:58421881-58421900 | None:intergenic | 50.0% | |
| TGGCAGCTGAGCTTACAGAT+GGG | + | chr2_3:58421984-58422003 | Msa0301870:CDS | 50.0% | |
| AGCTGAGCTTACAGATGGGA+TGG | + | chr2_3:58421988-58422007 | Msa0301870:CDS | 50.0% | |
| TTCTGGCACCAGAGTTGACA+AGG | - | chr2_3:58422097-58422116 | None:intergenic | 50.0% | |
| !! | GTTTGGTGTTGCCAGCAAAC+TGG | - | chr2_3:58422166-58422185 | None:intergenic | 50.0% |
| AGGTGGAAAGGGATTGGGAA+AGG | + | chr2_3:58419905-58419924 | Msa0301870:CDS | 50.0% | |
| GGTGGAAAGGGATTGGGAAA+GGG | + | chr2_3:58419906-58419925 | Msa0301870:CDS | 50.0% | |
| AGGAGCAAAACGACACCGTA+AGG | + | chr2_3:58419929-58419948 | Msa0301870:CDS | 50.0% | |
| GAAACCCGCTATTCGTCGTT+TGG | + | chr2_3:58419980-58419999 | Msa0301870:CDS | 50.0% | |
| TCGTGCCAAACGACGAATAG+CGG | - | chr2_3:58419988-58420007 | None:intergenic | 50.0% | |
| ATTCGTCGTTTGGCACGAAG+AGG | + | chr2_3:58419990-58420009 | Msa0301870:CDS | 50.0% | |
| GTCGTTGTTAACGGCTTCTC+TGG | + | chr2_3:58420523-58420542 | Msa0301870:intron | 50.0% | |
| TCCAGAAACCCCTGTCTGTT+TGG | + | chr2_3:58421107-58421126 | Msa0301870:intron | 50.0% | |
| TCCAAACAGACAGGGGTTTC+TGG | - | chr2_3:58421111-58421130 | None:intergenic | 50.0% | |
| GAGGCAGGCAGAATATGATG+AGG | - | chr2_3:58421424-58421443 | None:intergenic | 50.0% | |
| GCATAACCAGAAAGGGGTTC+TGG | - | chr2_3:58421736-58421755 | None:intergenic | 50.0% | |
| TTTCCAGCTCTCAACGGCAT+TGG | + | chr2_3:58421875-58421894 | Msa0301870:CDS | 50.0% | |
| ATACCAATGCCGTTGAGAGC+TGG | - | chr2_3:58421881-58421900 | None:intergenic | 50.0% | |
| TGGCAGCTGAGCTTACAGAT+GGG | + | chr2_3:58421984-58422003 | Msa0301870:CDS | 50.0% | |
| AGCTGAGCTTACAGATGGGA+TGG | + | chr2_3:58421988-58422007 | Msa0301870:CDS | 50.0% | |
| TTCTGGCACCAGAGTTGACA+AGG | - | chr2_3:58422097-58422116 | None:intergenic | 50.0% | |
| !! | GTTTGGTGTTGCCAGCAAAC+TGG | - | chr2_3:58422166-58422185 | None:intergenic | 50.0% |
| ATGTCTGGGCGTGGAAAAGG+TGG | + | chr2_3:58419888-58419907 | Msa0301870:CDS | 55.0% | |
| TGGGCGTGGAAAAGGTGGAA+AGG | + | chr2_3:58419893-58419912 | Msa0301870:CDS | 55.0% | |
| GGGCGTGGAAAAGGTGGAAA+GGG | + | chr2_3:58419894-58419913 | Msa0301870:CDS | 55.0% | |
| GGAAAGGGATTGGGAAAGGG+AGG | + | chr2_3:58419909-58419928 | Msa0301870:CDS | 55.0% | |
| CGTGCCAAACGACGAATAGC+GGG | - | chr2_3:58419987-58420006 | None:intergenic | 55.0% | |
| GGAGGAGTGAAGCGTATCAG+CGG | + | chr2_3:58420011-58420030 | Msa0301870:CDS | 55.0% | |
| GTGGATGCAGGATGTTGCGA+TGG | + | chr2_3:58421142-58421161 | Msa0301870:intron | 55.0% | |
| ACAGTCCCAGAACCCCTTTC+TGG | + | chr2_3:58421727-58421746 | Msa0301870:intron | 55.0% | |
| TAGAGCAGAAGTGGGAGCGA+AGG | + | chr2_3:58421910-58421929 | Msa0301870:CDS | 55.0% | |
| AGAGCAGAAGTGGGAGCGAA+GGG | + | chr2_3:58421911-58421930 | Msa0301870:CDS | 55.0% | |
| GTGGCAGCTGAGCTTACAGA+TGG | + | chr2_3:58421983-58422002 | Msa0301870:CDS | 55.0% | |
| ! | CAACTCTGGTGCCAGAACAG+CGG | + | chr2_3:58422100-58422119 | Msa0301870:intron | 55.0% |
| TTCACCACGGAAAATCCCGC+TGG | + | chr2_3:58422137-58422156 | Msa0301870:CDS | 55.0% | |
| ! | GAAACCAGCGGGATTTTCCG+TGG | - | chr2_3:58422144-58422163 | None:intergenic | 55.0% |
| CCAGCAAACTGGAAACCAGC+GGG | - | chr2_3:58422155-58422174 | None:intergenic | 55.0% | |
| GCCAGCAAACTGGAAACCAG+CGG | - | chr2_3:58422156-58422175 | None:intergenic | 55.0% | |
| ATGTCTGGGCGTGGAAAAGG+TGG | + | chr2_3:58419888-58419907 | Msa0301870:CDS | 55.0% | |
| TGGGCGTGGAAAAGGTGGAA+AGG | + | chr2_3:58419893-58419912 | Msa0301870:CDS | 55.0% | |
| GGGCGTGGAAAAGGTGGAAA+GGG | + | chr2_3:58419894-58419913 | Msa0301870:CDS | 55.0% | |
| GGAAAGGGATTGGGAAAGGG+AGG | + | chr2_3:58419909-58419928 | Msa0301870:CDS | 55.0% | |
| CGTGCCAAACGACGAATAGC+GGG | - | chr2_3:58419987-58420006 | None:intergenic | 55.0% | |
| GGAGGAGTGAAGCGTATCAG+CGG | + | chr2_3:58420011-58420030 | Msa0301870:CDS | 55.0% | |
| GTGGATGCAGGATGTTGCGA+TGG | + | chr2_3:58421142-58421161 | Msa0301870:intron | 55.0% | |
| ACAGTCCCAGAACCCCTTTC+TGG | + | chr2_3:58421727-58421746 | Msa0301870:intron | 55.0% | |
| TAGAGCAGAAGTGGGAGCGA+AGG | + | chr2_3:58421910-58421929 | Msa0301870:CDS | 55.0% | |
| AGAGCAGAAGTGGGAGCGAA+GGG | + | chr2_3:58421911-58421930 | Msa0301870:CDS | 55.0% | |
| GTGGCAGCTGAGCTTACAGA+TGG | + | chr2_3:58421983-58422002 | Msa0301870:CDS | 55.0% | |
| ! | CAACTCTGGTGCCAGAACAG+CGG | + | chr2_3:58422100-58422119 | Msa0301870:intron | 55.0% |
| TTCACCACGGAAAATCCCGC+TGG | + | chr2_3:58422137-58422156 | Msa0301870:CDS | 55.0% | |
| ! | GAAACCAGCGGGATTTTCCG+TGG | - | chr2_3:58422144-58422163 | None:intergenic | 55.0% |
| CCAGCAAACTGGAAACCAGC+GGG | - | chr2_3:58422155-58422174 | None:intergenic | 55.0% | |
| GCCAGCAAACTGGAAACCAG+CGG | - | chr2_3:58422156-58422175 | None:intergenic | 55.0% | |
| CGTCGTTTGGCACGAAGAGG+AGG | + | chr2_3:58419993-58420012 | Msa0301870:CDS | 60.0% | |
| !! | CCCGCTGGTTTCCAGTTTGC+TGG | + | chr2_3:58422152-58422171 | Msa0301870:CDS | 60.0% |
| CGTCGTTTGGCACGAAGAGG+AGG | + | chr2_3:58419993-58420012 | Msa0301870:CDS | 60.0% | |
| !! | CCCGCTGGTTTCCAGTTTGC+TGG | + | chr2_3:58422152-58422171 | Msa0301870:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 58419888 | 58422229 | 58419888 | ID=Msa0301870;Name=Msa0301870 |
| chr2_3 | mRNA | 58419888 | 58422229 | 58419888 | ID=Msa0301870-mRNA-1;Parent=Msa0301870;Name=Msa0301870-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|0.8|1|1|5|0|264 |
| chr2_3 | exon | 58419888 | 58420194 | 58419888 | ID=Msa0301870-mRNA-1:exon:18859;Parent=Msa0301870-mRNA-1 |
| chr2_3 | exon | 58421152 | 58421261 | 58421152 | ID=Msa0301870-mRNA-1:exon:18860;Parent=Msa0301870-mRNA-1 |
| chr2_3 | exon | 58421664 | 58421710 | 58421664 | ID=Msa0301870-mRNA-1:exon:18861;Parent=Msa0301870-mRNA-1 |
| chr2_3 | exon | 58421811 | 58422026 | 58421811 | ID=Msa0301870-mRNA-1:exon:18862;Parent=Msa0301870-mRNA-1 |
| chr2_3 | exon | 58422115 | 58422229 | 58422115 | ID=Msa0301870-mRNA-1:exon:18863;Parent=Msa0301870-mRNA-1 |
| chr2_3 | CDS | 58419888 | 58420194 | 58419888 | ID=Msa0301870-mRNA-1:cds;Parent=Msa0301870-mRNA-1 |
| chr2_3 | CDS | 58421152 | 58421261 | 58421152 | ID=Msa0301870-mRNA-1:cds;Parent=Msa0301870-mRNA-1 |
| chr2_3 | CDS | 58421664 | 58421710 | 58421664 | ID=Msa0301870-mRNA-1:cds;Parent=Msa0301870-mRNA-1 |
| chr2_3 | CDS | 58421811 | 58422026 | 58421811 | ID=Msa0301870-mRNA-1:cds;Parent=Msa0301870-mRNA-1 |
| chr2_3 | CDS | 58422115 | 58422229 | 58422115 | ID=Msa0301870-mRNA-1:cds;Parent=Msa0301870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
