Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0227370 | XP_003597463.2 | 94.469 | 452 | 25 | 0 | 1 | 452 | 1 | 452 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0227370 | G7IUE9 | 94.469 | 452 | 25 | 0 | 1 | 452 | 1 | 452 | 0.0 | 840 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020540 | Msa0227370 | 0.801352 | 9.378357e-49 | -8.615850e-47 |
| Msa0035140 | Msa0227370 | 0.800045 | 1.732990e-48 | -8.615850e-47 |
| Msa0067060 | Msa0227370 | 0.803044 | 4.205321e-49 | -8.615850e-47 |
| Msa0068150 | Msa0227370 | 0.811516 | 6.731864e-51 | -8.615850e-47 |
| Msa0127680 | Msa0227370 | 0.812555 | 3.996377e-51 | -8.615850e-47 |
| Msa0159590 | Msa0227370 | 0.822270 | 2.591088e-53 | -8.615850e-47 |
| Msa0159620 | Msa0227370 | 0.815297 | 9.937084e-52 | -8.615850e-47 |
| Msa0209980 | Msa0227370 | 0.800320 | 1.523032e-48 | -8.615850e-47 |
| Msa0227370 | Msa0302830 | 0.902579 | 8.390755e-79 | -8.615850e-47 |
| Msa0227370 | Msa0367520 | 0.815877 | 7.382311e-52 | -8.615850e-47 |
| Msa0227370 | Msa0422050 | 0.806051 | 9.921949e-50 | -8.615850e-47 |
| Msa0227370 | Msa0468700 | 0.812660 | 3.792035e-51 | -8.615850e-47 |
| Msa0227370 | Msa0514580 | 0.820709 | 5.944664e-53 | -8.615850e-47 |
| Msa0227370 | Msa0550590 | 0.825894 | 3.654386e-54 | -8.615850e-47 |
| Msa0227370 | Msa0561560 | 0.828572 | 8.343618e-55 | -8.615850e-47 |
| Msa0227370 | Msa0567170 | 0.803038 | 4.218076e-49 | -8.615850e-47 |
| Msa0227370 | Msa0571620 | 0.826352 | 2.843635e-54 | -8.615850e-47 |
| Msa0227370 | Msa0606100 | 0.827612 | 1.420992e-54 | -8.615850e-47 |
| Msa0227370 | Msa0615630 | 0.823791 | 1.145057e-53 | -8.615850e-47 |
| Msa0227370 | Msa0620500 | 0.802644 | 5.087545e-49 | -8.615850e-47 |
| Msa0227370 | Msa0647050 | 0.820281 | 7.453781e-53 | -8.615850e-47 |
| Msa0227370 | Msa0698730 | 0.852795 | 3.651287e-61 | -8.615850e-47 |
| Msa0227370 | Msa0703600 | 0.814774 | 1.298033e-51 | -8.615850e-47 |
| Msa0227370 | Msa0709200 | 0.814262 | 1.684852e-51 | -8.615850e-47 |
| Msa0227370 | Msa0713920 | 0.806402 | 8.371409e-50 | -8.615850e-47 |
| Msa0227370 | Msa0714790 | 0.804374 | 2.227496e-49 | -8.615850e-47 |
| Msa0227370 | Msa0743440 | 0.800576 | 1.350883e-48 | -8.615850e-47 |
| Msa0227370 | Msa0756820 | 0.806329 | 8.673074e-50 | -8.615850e-47 |
| Msa0227370 | Msa0780910 | 0.801997 | 6.914853e-49 | -8.615850e-47 |
| Msa0227370 | Msa0821160 | 0.813553 | 2.414616e-51 | -8.615850e-47 |
| Msa0227370 | Msa0828190 | 0.963384 | 5.102728e-122 | -8.615850e-47 |
| Msa0227370 | Msa0966320 | 0.812024 | 5.220974e-51 | -8.615850e-47 |
| Msa0227370 | Msa1008670 | 0.804281 | 2.328976e-49 | -8.615850e-47 |
| Msa0227370 | Msa1033920 | 0.824868 | 6.391190e-54 | -8.615850e-47 |
| Msa0227370 | Msa1060900 | 0.810304 | 1.231741e-50 | -8.615850e-47 |
| Msa0227370 | Msa1078880 | 0.800388 | 1.475724e-48 | -8.615850e-47 |
| Msa0227370 | Msa1078970 | 0.814856 | 1.244887e-51 | -8.615850e-47 |
| Msa0227370 | Msa1116660 | 0.821798 | 3.333245e-53 | -8.615850e-47 |
| Msa0227370 | Msa1116740 | 0.800145 | 1.653377e-48 | -8.615850e-47 |
| Msa0227370 | Msa1127280 | 0.818514 | 1.883668e-52 | -8.615850e-47 |
| Msa0227370 | Msa1132530 | 0.816920 | 4.312584e-52 | -8.615850e-47 |
| Msa0227370 | Msa1139050 | 0.810283 | 1.244858e-50 | -8.615850e-47 |
| Msa0227370 | Msa1148630 | 0.809269 | 2.057249e-50 | -8.615850e-47 |
| Msa0227370 | Msa1162880 | 0.824485 | 7.868994e-54 | -8.615850e-47 |
| Msa0227370 | Msa1165480 | 0.810573 | 1.078035e-50 | -8.615850e-47 |
| Msa0227370 | Msa1214350 | 0.804044 | 2.609664e-49 | -8.615850e-47 |
| Msa0227370 | Msa1215980 | 0.802958 | 4.382816e-49 | -8.615850e-47 |
| Msa0227370 | Msa1218820 | 0.804347 | 2.256165e-49 | -8.615850e-47 |
| Msa0227370 | Msa1226520 | 0.800125 | 1.669233e-48 | -8.615850e-47 |
| Msa0227370 | Msa1244240 | 0.812756 | 3.611641e-51 | -8.615850e-47 |
| Msa0227370 | Msa1263780 | 0.800097 | 1.691013e-48 | -8.615850e-47 |
| Msa0227370 | Msa1268540 | 0.804870 | 1.755144e-49 | -8.615850e-47 |
| Msa0227370 | Msa1305780 | 0.815725 | 7.979142e-52 | -8.615850e-47 |
| Msa0227370 | Msa1339170 | 0.823707 | 1.198202e-53 | -8.615850e-47 |
| Msa0227370 | Msa1375350 | 0.806131 | 9.548850e-50 | -8.615850e-47 |
| Msa0227370 | Msa1426110 | 0.809379 | 1.947782e-50 | -8.615850e-47 |
| Msa0227370 | Msa1442260 | 0.816405 | 5.624100e-52 | -8.615850e-47 |
| Msa0227370 | Msa1446100 | 0.815981 | 6.997581e-52 | -8.615850e-47 |
| Msa0227370 | Msa1447170 | 0.810963 | 8.876423e-51 | -8.615850e-47 |
| Msa0227370 | Msa1453280 | 0.963808 | 1.535388e-122 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0227370 | MtrunA17_Chr2g0329061 | 94.469 | 452 | 25 | 0 | 1 | 452 | 1 | 452 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0227370 | AT5G12930.1 | 48.601 | 393 | 176 | 11 | 1 | 384 | 1 | 376 | 3.58e-109 | 330 |
Find 119 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTACAAAACCATATTTAA+TGG | 0.181372 | 2_1:+78266457 | None:intergenic |
| TTTCTTATTGTTGCTGTTAT+TGG | 0.223426 | 2_1:-78270516 | Msa0227370:CDS |
| TAGCCAGCTATTGCTGTCTT+TGG | 0.236408 | 2_1:-78266432 | Msa0227370:three_prime_UTR |
| AAAGAAGGATTTGGTTGTTC+TGG | 0.252617 | 2_1:-78267578 | Msa0227370:CDS |
| GTCAACATTCTACAGGTTTA+TGG | 0.253819 | 2_1:-78266552 | Msa0227370:three_prime_UTR |
| AATTGTAGATTCAGAATTCT+TGG | 0.260695 | 2_1:+78267021 | None:intergenic |
| TTCCTTCTGTAATGAATATA+TGG | 0.287784 | 2_1:-78268714 | Msa0227370:intron |
| AATGTCTGGCTTGTCGGATT+TGG | 0.295447 | 2_1:-78268301 | Msa0227370:CDS |
| TAGAGAAGGGTGACTTATAT+TGG | 0.298699 | 2_1:+78268346 | None:intergenic |
| CTGAATTAGAAGACATTATA+CGG | 0.313995 | 2_1:-78267627 | Msa0227370:CDS |
| TTCAAAACTAAAGAAGGATT+TGG | 0.320274 | 2_1:-78267587 | Msa0227370:CDS |
| AGCCAGCTATTGCTGTCTTT+GGG | 0.321958 | 2_1:-78266431 | Msa0227370:three_prime_UTR |
| GCATCCAACTCTAAACAAAA+TGG | 0.348180 | 2_1:-78270864 | Msa0227370:five_prime_UTR |
| TTGCAATTAGATGAAACATT+TGG | 0.367954 | 2_1:-78268791 | Msa0227370:CDS |
| TTAAGAAATCCGTTGAGCTT+AGG | 0.369730 | 2_1:-78270449 | Msa0227370:CDS |
| AGATAACCTCATTTATGATA+TGG | 0.377526 | 2_1:-78267131 | Msa0227370:CDS |
| TGTGGCAGCTGAATTTCATT+TGG | 0.377686 | 2_1:+78267160 | None:intergenic |
| TAAGAAGGAATTTCTTTAAG+AGG | 0.384480 | 2_1:+78266917 | None:intergenic |
| TAAGAAATCCGTTGAGCTTA+GGG | 0.394216 | 2_1:-78270448 | Msa0227370:intron |
| CAGACATTCTTCTCTCCTCT+TGG | 0.398506 | 2_1:+78268316 | None:intergenic |
| AAAATGAAGTCTCACTGGTT+TGG | 0.399324 | 2_1:+78266319 | None:intergenic |
| CAAATAGTGTAGCAAACAAT+AGG | 0.402326 | 2_1:-78266577 | Msa0227370:three_prime_UTR |
| AAGATGTTTATAATCTTAAG+AGG | 0.402964 | 2_1:-78267826 | Msa0227370:CDS |
| TGCTGCTGCTCAGTCCAAAA+AGG | 0.410742 | 2_1:-78270490 | Msa0227370:CDS |
| CCAAAATATGTAAGAACAAA+AGG | 0.411718 | 2_1:+78266643 | None:intergenic |
| CTCAGAAGAGTTTAGCAGAT+TGG | 0.411871 | 2_1:+78267766 | None:intergenic |
| AACAATTTCAAAACTAAAGA+AGG | 0.414561 | 2_1:-78267593 | Msa0227370:CDS |
| CACATCTGCTGCTGATATCC+AGG | 0.416831 | 2_1:-78268268 | Msa0227370:intron |
| ACAATAAGAAACCGATGAAT+AGG | 0.418221 | 2_1:+78270528 | None:intergenic |
| CAAGAGGAGAGAAGAATGTC+TGG | 0.419161 | 2_1:-78268315 | Msa0227370:CDS |
| GTTCATTAGAGGTTATAAAT+CGG | 0.419698 | 2_1:+78266276 | None:intergenic |
| TGCAGGTTATGCAGCTTTCA+AGG | 0.419818 | 2_1:-78267213 | Msa0227370:intron |
| AATGAGCAGAGGTTCATTAG+AGG | 0.421638 | 2_1:+78266265 | None:intergenic |
| TTCATTAGAGGTTATAAATC+GGG | 0.424201 | 2_1:+78266277 | None:intergenic |
| CGTTAACAACCCGTCCTTGA+AGG | 0.436333 | 2_1:+78270628 | None:intergenic |
| CTCTTGGTCTTCATTAGAGA+AGG | 0.441119 | 2_1:+78268332 | None:intergenic |
| GGTAATGGTGAAGTAGCGTT+AGG | 0.448670 | 2_1:+78270762 | None:intergenic |
| TTTGGTTGTTCTGGAACAAA+AGG | 0.449334 | 2_1:-78267569 | Msa0227370:intron |
| CGACGGCGGGAGAGAGTGAT+TGG | 0.450699 | 2_1:+78270720 | None:intergenic |
| GACTAATTACTCATTAAGTA+TGG | 0.452612 | 2_1:-78266376 | Msa0227370:three_prime_UTR |
| GTTGCCGTTAGAGTTGTTCA+TGG | 0.453633 | 2_1:+78270785 | None:intergenic |
| TAATTGCAATTCTCCGTCCT+TGG | 0.457323 | 2_1:+78268805 | None:intergenic |
| GTTGGTAGAATGACATCAAC+AGG | 0.459761 | 2_1:+78267043 | None:intergenic |
| TGATGAACTTGCATTTGCTT+GGG | 0.460645 | 2_1:-78270562 | Msa0227370:CDS |
| GAGAAGAATGTCTGGCTTGT+CGG | 0.462441 | 2_1:-78268307 | Msa0227370:CDS |
| GCATTAGATTTCTGATAAGA+AGG | 0.463964 | 2_1:+78266902 | None:intergenic |
| AGATCTTGTGCATTGTTGAC+AGG | 0.464468 | 2_1:+78267067 | None:intergenic |
| TTATGCTCAGTTTAACAACT+TGG | 0.475767 | 2_1:-78267858 | Msa0227370:intron |
| ATTTGGAATACTTGCAGAGA+AGG | 0.479701 | 2_1:+78267177 | None:intergenic |
| AGTTTGTTGATTGCGGTTGT+TGG | 0.481813 | 2_1:-78268754 | Msa0227370:CDS |
| GTGATGAACTTGCATTTGCT+TGG | 0.487161 | 2_1:-78270563 | Msa0227370:CDS |
| ATGAGGTTATCTCTCATTTG+TGG | 0.489300 | 2_1:+78267142 | None:intergenic |
| TTGCAATTCTCCGTCCTTGG+TGG | 0.492663 | 2_1:+78268808 | None:intergenic |
| AAAACAATTGTCACCTCGTA+AGG | 0.497486 | 2_1:-78266861 | Msa0227370:CDS |
| CGATGAAAATGAAGTCTCAC+TGG | 0.502795 | 2_1:+78266314 | None:intergenic |
| AATGAGTAATTAGTCTATGA+AGG | 0.508399 | 2_1:+78266384 | None:intergenic |
| CTGGATTAACCTTCAAGGAC+GGG | 0.510704 | 2_1:-78270637 | Msa0227370:CDS |
| ATGGCCTGGATTAACCTTCA+AGG | 0.513528 | 2_1:-78270642 | Msa0227370:CDS |
| ATAGGTAGTCAACATTCTAC+AGG | 0.514539 | 2_1:-78266559 | Msa0227370:three_prime_UTR |
| ATCCCAAAGACAGCAATAGC+TGG | 0.514581 | 2_1:+78266429 | None:intergenic |
| GGCGGAGAGACGACGACGGC+GGG | 0.516365 | 2_1:+78270707 | None:intergenic |
| TTGGAGGACCTCATTTCCAC+TGG | 0.518085 | 2_1:+78268365 | None:intergenic |
| AAATTATAGATAGTAGCAGC+AGG | 0.520555 | 2_1:-78266498 | Msa0227370:three_prime_UTR |
| TGAAGGTTAATCCAGGCCAT+TGG | 0.520684 | 2_1:+78270645 | None:intergenic |
| TGTCTCCTTGTAGGTTGCTG+TGG | 0.522837 | 2_1:-78266687 | Msa0227370:intron |
| AGTAGAAGACGATCTCTCAA+TGG | 0.533967 | 2_1:-78266827 | Msa0227370:CDS |
| CCGCCACAACGGTCGAGCCG+CGG | 0.535174 | 2_1:-78270689 | Msa0227370:CDS |
| TACCATATATTCATTACAGA+AGG | 0.538276 | 2_1:+78268712 | None:intergenic |
| GTGCGAGTGCAAATAAGAGA+TGG | 0.543346 | 2_1:-78266796 | Msa0227370:CDS |
| GTAGATTCAGAATTCTTGGT+TGG | 0.551861 | 2_1:+78267025 | None:intergenic |
| CGAATTAAGTTTGTTGATTG+CGG | 0.555870 | 2_1:-78268761 | Msa0227370:CDS |
| AGAAGGGTGACTTATATTGG+AGG | 0.556146 | 2_1:+78268349 | None:intergenic |
| AAGAGCCTCCAGTGGAAATG+AGG | 0.559249 | 2_1:-78268373 | Msa0227370:CDS |
| TAAGAGGGACTGTGATGAGA+AGG | 0.561669 | 2_1:-78267810 | Msa0227370:CDS |
| CCGTCCTTGAAGGTTAATCC+AGG | 0.562538 | 2_1:+78270638 | None:intergenic |
| GGAATACTTGCAGAGAAGGA+TGG | 0.566765 | 2_1:+78267181 | None:intergenic |
| GCTAGCGCGGCTAGAACTGT+TGG | 0.566998 | 2_1:-78270597 | Msa0227370:CDS |
| ACTATCAGAATCAGAAGATG+AGG | 0.570063 | 2_1:+78267093 | None:intergenic |
| CCGCGGCTCGACCGTTGTGG+CGG | 0.571817 | 2_1:+78270689 | None:intergenic |
| AGCGCGGCTAGAACTGTTGG+TGG | 0.575091 | 2_1:-78270594 | Msa0227370:CDS |
| GTAATGGTGAAGTAGCGTTA+GGG | 0.578358 | 2_1:+78270763 | None:intergenic |
| TCTTGGTCTTCATTAGAGAA+GGG | 0.582381 | 2_1:+78268333 | None:intergenic |
| ACGCCGCGGCTCGACCGTTG+TGG | 0.583747 | 2_1:+78270686 | None:intergenic |
| GCGGCTAGAACTGTTGGTGG+TGG | 0.584041 | 2_1:-78270591 | Msa0227370:CDS |
| CGGCGGGAGAGAGTGATTGG+TGG | 0.585218 | 2_1:+78270723 | None:intergenic |
| ATCAGAAGATGAGGGGCTAG+TGG | 0.588405 | 2_1:+78267102 | None:intergenic |
| CCTGGATTAACCTTCAAGGA+CGG | 0.589852 | 2_1:-78270638 | Msa0227370:CDS |
| TGCTGTCCATATCATAAATG+AGG | 0.592185 | 2_1:+78267125 | None:intergenic |
| TGCGAGTGCAAATAAGAGAT+GGG | 0.593088 | 2_1:-78266795 | Msa0227370:CDS |
| CTATCAGAATCAGAAGATGA+GGG | 0.593200 | 2_1:+78267094 | None:intergenic |
| TCAGCTGTTATCAAGCATGC+AGG | 0.594282 | 2_1:-78268903 | Msa0227370:CDS |
| AATTTCTTTAAGAGGACTAG+CGG | 0.594712 | 2_1:+78266925 | None:intergenic |
| TTCTGAGGTTGCTAATAGCA+AGG | 0.595094 | 2_1:-78267750 | Msa0227370:intron |
| TGATAGTATAGTAAATTGAG+AGG | 0.605111 | 2_1:-78270929 | Msa0227370:five_prime_UTR |
| AAGAAGTTATCCACCAAGGA+CGG | 0.607937 | 2_1:-78268818 | Msa0227370:CDS |
| AGATGTTTATAATCTTAAGA+GGG | 0.615181 | 2_1:-78267825 | Msa0227370:CDS |
| ACTGGAGGCTCTTCTACTCA+AGG | 0.617031 | 2_1:+78268383 | None:intergenic |
| ATTGGCTTCGAAAATGAGAT+CGG | 0.626620 | 2_1:+78270663 | None:intergenic |
| GAGGACCTCATTTCCACTGG+AGG | 0.630298 | 2_1:+78268368 | None:intergenic |
| TGTGGAATGTAGCAGAGTAC+AGG | 0.632552 | 2_1:-78266669 | Msa0227370:three_prime_UTR |
| CTTCTCTAATGAAGACCAAG+AGG | 0.641341 | 2_1:-78268331 | Msa0227370:CDS |
| TCGTCGTCTCTCCGCCACAA+CGG | 0.642258 | 2_1:-78270700 | Msa0227370:CDS |
| GCTTCCATGAACAACTCTAA+CGG | 0.643301 | 2_1:-78270789 | Msa0227370:exon |
| CAATCTGCTAAACTCTTCTG+AGG | 0.648603 | 2_1:-78267765 | Msa0227370:CDS |
| ATAAGAAACCGATGAATAGG+CGG | 0.650348 | 2_1:+78270531 | None:intergenic |
| TGGCGGAGAGACGACGACGG+CGG | 0.651162 | 2_1:+78270706 | None:intergenic |
| TATACATACCCTAAGCTCAA+CGG | 0.651300 | 2_1:+78270440 | None:intergenic |
| GGTGGAATTGAAACGAGACA+TGG | 0.665905 | 2_1:+78270741 | None:intergenic |
| TTGAGTAGAAGAGCCTCCAG+TGG | 0.670401 | 2_1:-78268381 | Msa0227370:CDS |
| ATTGAAACGAGACATGGTAA+TGG | 0.670705 | 2_1:+78270747 | None:intergenic |
| AATTATAGATAGTAGCAGCA+GGG | 0.674088 | 2_1:-78266497 | Msa0227370:three_prime_UTR |
| TATCAGAATCAGAAGATGAG+GGG | 0.677495 | 2_1:+78267095 | None:intergenic |
| CTATAATGAGAAATGAGCAG+AGG | 0.685334 | 2_1:+78266254 | None:intergenic |
| TAACGCTGATGAAGCTAGCG+CGG | 0.686137 | 2_1:-78270610 | Msa0227370:CDS |
| TAGCGGATTGAAATTTCGAG+CGG | 0.704247 | 2_1:+78266942 | None:intergenic |
| GAAAATGAGATCGGACGCCG+CGG | 0.709704 | 2_1:+78270672 | None:intergenic |
| TATCAAGAAGTTATCCACCA+AGG | 0.731353 | 2_1:-78268822 | Msa0227370:CDS |
| AATTAGAAGACATTATACGG+AGG | 0.745017 | 2_1:-78267624 | Msa0227370:CDS |
| TTGTGGCGGAGAGACGACGA+CGG | 0.751092 | 2_1:+78270703 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTATTTGAAAAGCATTT+TGG | - | chr2_1:78266857-78266876 | Msa0227370:CDS | 15.0% |
| !!! | TTTTTAAATTAAGATTGTAG+AGG | + | chr2_1:78267253-78267272 | None:intergenic | 15.0% |
| !! | TACTAAATATTGTCAAATAA+TGG | - | chr2_1:78268665-78268684 | Msa0227370:intron | 15.0% |
| !! | TTATAAATACATCATATATC+AGG | - | chr2_1:78269009-78269028 | Msa0227370:intron | 15.0% |
| !! | TAAGAATTTAAAAGTCAAAT+CGG | + | chr2_1:78269817-78269836 | None:intergenic | 15.0% |
| !! | ATTTACAAAACCATATTTAA+TGG | + | chr2_1:78270743-78270762 | None:intergenic | 15.0% |
| !!! | ATTTGTTATAATATTGTTGC+TGG | - | chr2_1:78266807-78266826 | Msa0227370:CDS | 20.0% |
| !!! | TTTGTTATAATATTGTTGCT+GGG | - | chr2_1:78266808-78266827 | Msa0227370:CDS | 20.0% |
| !!! | TTCAAATTTTCATCAGAAAT+TGG | + | chr2_1:78266835-78266854 | None:intergenic | 20.0% |
| !! | TTGTTATGTTAATAGTCATT+TGG | - | chr2_1:78267028-78267047 | Msa0227370:CDS | 20.0% |
| !! | TGTTATGTTAATAGTCATTT+GGG | - | chr2_1:78267029-78267048 | Msa0227370:CDS | 20.0% |
| !!! | TGCTTTTGATTTTTTTATCA+TGG | - | chr2_1:78268186-78268205 | Msa0227370:intron | 20.0% |
| !! | TTGAATGTGTGTATTAATAT+TGG | - | chr2_1:78268246-78268265 | Msa0227370:intron | 20.0% |
| !!! | TTATTATATAGCTTTTCACT+TGG | - | chr2_1:78268536-78268555 | Msa0227370:intron | 20.0% |
| !! | AAAAACTTAGTGTTATATAG+CGG | - | chr2_1:78268602-78268621 | Msa0227370:intron | 20.0% |
| !! | AATTAGTAATTGCTTAATTG+TGG | - | chr2_1:78269164-78269183 | Msa0227370:intron | 20.0% |
| !! | ATAGAACTAATAAAAACACA+AGG | + | chr2_1:78269280-78269299 | None:intergenic | 20.0% |
| !! | AAGATGTTTATAATCTTAAG+AGG | - | chr2_1:78269371-78269390 | Msa0227370:intron | 20.0% |
| !! | AGATGTTTATAATCTTAAGA+GGG | - | chr2_1:78269372-78269391 | Msa0227370:intron | 20.0% |
| !! | AACAATTTCAAAACTAAAGA+AGG | - | chr2_1:78269604-78269623 | Msa0227370:intron | 20.0% |
| !! | AAGAATTTAAAAGTCAAATC+GGG | + | chr2_1:78269816-78269835 | None:intergenic | 20.0% |
| !! | TGAAATGCTTCTTATATTAA+TGG | - | chr2_1:78269945-78269964 | Msa0227370:intron | 20.0% |
| !!! | TAAGTTTTAGCCATTAAATA+TGG | - | chr2_1:78270730-78270749 | Msa0227370:CDS | 20.0% |
| ! | TGATAGTATAGTAAATTGAG+AGG | - | chr2_1:78266268-78266287 | Msa0227370:three_prime_UTR | 25.0% |
| !!! | TTTGAATTTTGAGTTTGAGA+GGG | + | chr2_1:78266384-78266403 | None:intergenic | 25.0% |
| !! | TTTCTTATTGTTGCTGTTAT+TGG | - | chr2_1:78266681-78266700 | Msa0227370:intron | 25.0% |
| ! | TTGTTATAATATTGTTGCTG+GGG | - | chr2_1:78266809-78266828 | Msa0227370:CDS | 25.0% |
| ! | GTTATGTTAATAGTCATTTG+GGG | - | chr2_1:78267030-78267049 | Msa0227370:CDS | 25.0% |
| !! | TTTCACTAAAAAAGACCTTT+TGG | - | chr2_1:78267112-78267131 | Msa0227370:CDS | 25.0% |
| ! | TTTCTTTATATCCGATTTAG+AGG | - | chr2_1:78267801-78267820 | Msa0227370:CDS | 25.0% |
| !!! | GAATTCGAGATCTTTTAAAA+TGG | - | chr2_1:78267842-78267861 | Msa0227370:CDS | 25.0% |
| ! | ATCTTCAATATGAGAAAACT+TGG | - | chr2_1:78268052-78268071 | Msa0227370:intron | 25.0% |
| ! | TTAATACACACATTCAAAGT+TGG | + | chr2_1:78268243-78268262 | None:intergenic | 25.0% |
| ! | TTGCAATTAGATGAAACATT+TGG | - | chr2_1:78268406-78268425 | Msa0227370:intron | 25.0% |
| ! | TTCCTTCTGTAATGAATATA+TGG | - | chr2_1:78268483-78268502 | Msa0227370:intron | 25.0% |
| ! | TACCATATATTCATTACAGA+AGG | + | chr2_1:78268488-78268507 | None:intergenic | 25.0% |
| ! | AACTCATATACTTACTGTAT+TGG | - | chr2_1:78268511-78268530 | Msa0227370:intron | 25.0% |
| ! | ACTCATATACTTACTGTATT+GGG | - | chr2_1:78268512-78268531 | Msa0227370:intron | 25.0% |
| ! | TTAGTACTAAATACGTATCA+TGG | + | chr2_1:78268651-78268670 | None:intergenic | 25.0% |
| ! | ATATTGTCAAATAATGGTAG+TGG | - | chr2_1:78268671-78268690 | Msa0227370:intron | 25.0% |
| ! | ATTGACATAGTTAAATGCAA+TGG | - | chr2_1:78269194-78269213 | Msa0227370:intron | 25.0% |
| !!! | TAATTTGTTTTACTCTCTTG+CGG | - | chr2_1:78269236-78269255 | Msa0227370:intron | 25.0% |
| ! | TTGTAGTGAAAATGATAAGT+GGG | + | chr2_1:78269533-78269552 | None:intergenic | 25.0% |
| ! | ATTGTAGTGAAAATGATAAG+TGG | + | chr2_1:78269534-78269553 | None:intergenic | 25.0% |
| ! | CTGAATTAGAAGACATTATA+CGG | - | chr2_1:78269570-78269589 | Msa0227370:intron | 25.0% |
| ! | TTCAAAACTAAAGAAGGATT+TGG | - | chr2_1:78269610-78269629 | Msa0227370:intron | 25.0% |
| !! | ACAAAAGGTACATATATACA+TGG | - | chr2_1:78269643-78269662 | Msa0227370:intron | 25.0% |
| ! | TACATGGTAGATATAAACAA+TGG | - | chr2_1:78269659-78269678 | Msa0227370:intron | 25.0% |
| ! | AGATAACCTCATTTATGATA+TGG | - | chr2_1:78270066-78270085 | Msa0227370:intron | 25.0% |
| ! | AATTGTAGATTCAGAATTCT+TGG | + | chr2_1:78270179-78270198 | None:intergenic | 25.0% |
| ! | CAAAAATCTTAAATTCGTCA+GGG | - | chr2_1:78270218-78270237 | Msa0227370:intron | 25.0% |
| ! | TAAGAAGGAATTTCTTTAAG+AGG | + | chr2_1:78270283-78270302 | None:intergenic | 25.0% |
| ! | CCAAAATATGTAAGAACAAA+AGG | + | chr2_1:78270557-78270576 | None:intergenic | 25.0% |
| !! | CCTTTTGTTCTTACATATTT+TGG | - | chr2_1:78270554-78270573 | Msa0227370:CDS | 25.0% |
| !! | AATGAGTAATTAGTCTATGA+AGG | + | chr2_1:78270816-78270835 | None:intergenic | 25.0% |
| ! | GACTAATTACTCATTAAGTA+TGG | - | chr2_1:78270821-78270840 | Msa0227370:five_prime_UTR | 25.0% |
| ! | TTCATTAGAGGTTATAAATC+GGG | + | chr2_1:78270923-78270942 | None:intergenic | 25.0% |
| ! | GTTCATTAGAGGTTATAAAT+CGG | + | chr2_1:78270924-78270943 | None:intergenic | 25.0% |
| !!! | TATGCCATTTTGTTTAGAGT+TGG | + | chr2_1:78266340-78266359 | None:intergenic | 30.0% |
| !!! | GTTTGAATTTTGAGTTTGAG+AGG | + | chr2_1:78266385-78266404 | None:intergenic | 30.0% |
| ACAATAAGAAACCGATGAAT+AGG | + | chr2_1:78266672-78266691 | None:intergenic | 30.0% | |
| GCAAAATGTTCGTAAATTAG+TGG | - | chr2_1:78266986-78267005 | Msa0227370:CDS | 30.0% | |
| !! | TAGTGGTTATGTTAGTTTGT+AGG | - | chr2_1:78267003-78267022 | Msa0227370:CDS | 30.0% |
| !! | AGTGGTTATGTTAGTTTGTA+GGG | - | chr2_1:78267004-78267023 | Msa0227370:CDS | 30.0% |
| TGTAGTGTTTGGCAAAATTA+GGG | + | chr2_1:78267324-78267343 | None:intergenic | 30.0% | |
| TTGTAGTGTTTGGCAAAATT+AGG | + | chr2_1:78267325-78267344 | None:intergenic | 30.0% | |
| CTGATTGAATTTGTAGTGTT+TGG | + | chr2_1:78267335-78267354 | None:intergenic | 30.0% | |
| TCAAATAGTAGCTTGAGTTA+AGG | + | chr2_1:78267512-78267531 | None:intergenic | 30.0% | |
| ACTATGACAACAACATTTCT+TGG | + | chr2_1:78267560-78267579 | None:intergenic | 30.0% | |
| ACTTATAGCATCCTCTAAAT+CGG | + | chr2_1:78267815-78267834 | None:intergenic | 30.0% | |
| TTCTGCACAGTTATAAATTG+CGG | + | chr2_1:78267998-78268017 | None:intergenic | 30.0% | |
| ! | TTGTTTCATCACTATTTTCC+AGG | - | chr2_1:78268270-78268289 | Msa0227370:CDS | 30.0% |
| !! | CGAATTAAGTTTGTTGATTG+CGG | - | chr2_1:78268436-78268455 | Msa0227370:intron | 30.0% |
| CTCATATACTTACTGTATTG+GGG | - | chr2_1:78268513-78268532 | Msa0227370:intron | 30.0% | |
| !! | AGTTTTTCAATAGACACGTT+AGG | + | chr2_1:78268589-78268608 | None:intergenic | 30.0% |
| ACACTGAAGAAAATAATACC+TGG | + | chr2_1:78268950-78268969 | None:intergenic | 30.0% | |
| AATAAAAACACAAGGAAACC+AGG | + | chr2_1:78269272-78269291 | None:intergenic | 30.0% | |
| TTATGCTCAGTTTAACAACT+TGG | - | chr2_1:78269339-78269358 | Msa0227370:intron | 30.0% | |
| AATTAGAAGACATTATACGG+AGG | - | chr2_1:78269573-78269592 | Msa0227370:intron | 30.0% | |
| AATGCACCAATAGGTAATTT+AGG | - | chr2_1:78269682-78269701 | Msa0227370:intron | 30.0% | |
| TATGCACCTAAATTACCTAT+TGG | + | chr2_1:78269691-78269710 | None:intergenic | 30.0% | |
| !! | ATTGACTCACTTGTTATTGT+TGG | - | chr2_1:78269716-78269735 | Msa0227370:intron | 30.0% |
| !! | GACGAATTTAAGATTTTTGC+TGG | + | chr2_1:78270217-78270236 | None:intergenic | 30.0% |
| GCAAAAATCTTAAATTCGTC+AGG | - | chr2_1:78270217-78270236 | Msa0227370:intron | 30.0% | |
| ! | AATTTCTTTAAGAGGACTAG+CGG | + | chr2_1:78270275-78270294 | None:intergenic | 30.0% |
| GCATTAGATTTCTGATAAGA+AGG | + | chr2_1:78270298-78270317 | None:intergenic | 30.0% | |
| CAAATAGTGTAGCAAACAAT+AGG | - | chr2_1:78270620-78270639 | Msa0227370:CDS | 30.0% | |
| AAATTATAGATAGTAGCAGC+AGG | - | chr2_1:78270699-78270718 | Msa0227370:CDS | 30.0% | |
| AATTATAGATAGTAGCAGCA+GGG | - | chr2_1:78270700-78270719 | Msa0227370:CDS | 30.0% | |
| GCATCCAACTCTAAACAAAA+TGG | - | chr2_1:78266333-78266352 | Msa0227370:three_prime_UTR | 35.0% | |
| ATTGAAACGAGACATGGTAA+TGG | + | chr2_1:78266453-78266472 | None:intergenic | 35.0% | |
| ! | ATTGGCTTCGAAAATGAGAT+CGG | + | chr2_1:78266537-78266556 | None:intergenic | 35.0% |
| TGATGAACTTGCATTTGCTT+GGG | - | chr2_1:78266635-78266654 | Msa0227370:three_prime_UTR | 35.0% | |
| ! | ATCTTTTTCCGCCTATTCAT+CGG | - | chr2_1:78266658-78266677 | Msa0227370:three_prime_UTR | 35.0% |
| ATAAGAAACCGATGAATAGG+CGG | + | chr2_1:78266669-78266688 | None:intergenic | 35.0% | |
| ! | GAAAATCTCTCGATCCTTTT+TGG | + | chr2_1:78266724-78266743 | None:intergenic | 35.0% |
| TTAAGAAATCCGTTGAGCTT+AGG | - | chr2_1:78266748-78266767 | Msa0227370:intron | 35.0% | |
| TAAGAAATCCGTTGAGCTTA+GGG | - | chr2_1:78266749-78266768 | Msa0227370:intron | 35.0% | |
| TATACATACCCTAAGCTCAA+CGG | + | chr2_1:78266760-78266779 | None:intergenic | 35.0% | |
| GTAGTGTTTGGCAAAATTAG+GGG | + | chr2_1:78267323-78267342 | None:intergenic | 35.0% | |
| ! | AGCTAGCTTATAACTGATAG+CGG | + | chr2_1:78267367-78267386 | None:intergenic | 35.0% |
| !! | TTATAGCGGATAGCTGATAA+TGG | + | chr2_1:78267386-78267405 | None:intergenic | 35.0% |
| !!! | TTTTTTACCAAACAGAGCCT+TGG | - | chr2_1:78267482-78267501 | Msa0227370:intron | 35.0% |
| TTACAATCACCACGCAATTA+CGG | + | chr2_1:78267664-78267683 | None:intergenic | 35.0% | |
| ! | CAATGTGTATTGTTGGTGTT+GGG | + | chr2_1:78267942-78267961 | None:intergenic | 35.0% |
| ACAATGTGTATTGTTGGTGT+TGG | + | chr2_1:78267943-78267962 | None:intergenic | 35.0% | |
| CACAGTTATAAATTGCGGAT+GGG | + | chr2_1:78267993-78268012 | None:intergenic | 35.0% | |
| TATCAAGAAGTTATCCACCA+AGG | - | chr2_1:78268375-78268394 | Msa0227370:CDS | 35.0% | |
| !! | ACTCATTGACTTTGTTAGCA+GGG | - | chr2_1:78268789-78268808 | Msa0227370:CDS | 35.0% |
| TAGAGAAGGGTGACTTATAT+TGG | + | chr2_1:78268854-78268873 | None:intergenic | 35.0% | |
| ! | TCTTGGTCTTCATTAGAGAA+GGG | + | chr2_1:78268867-78268886 | None:intergenic | 35.0% |
| GTGTCATCGTTGAATGATAT+TGG | - | chr2_1:78268966-78268985 | Msa0227370:intron | 35.0% | |
| GGTTATCTGTCAAATGATAC+AGG | - | chr2_1:78269030-78269049 | Msa0227370:intron | 35.0% | |
| ! | TCCATGGTCTTGACTTTAAT+TGG | - | chr2_1:78269128-78269147 | Msa0227370:intron | 35.0% |
| TCCAATTAAAGTCAAGACCA+TGG | + | chr2_1:78269132-78269151 | None:intergenic | 35.0% | |
| ! | ATTGGTCAGCTCTTTTATTG+TGG | + | chr2_1:78269416-78269435 | None:intergenic | 35.0% |
| ! | TGCATTTTATTCTCCAGAGT+TGG | - | chr2_1:78269477-78269496 | Msa0227370:intron | 35.0% |
| !! | ATGATAAGTGGGTTAGGAAA+GGG | + | chr2_1:78269522-78269541 | None:intergenic | 35.0% |
| !! | AATGATAAGTGGGTTAGGAA+AGG | + | chr2_1:78269523-78269542 | None:intergenic | 35.0% |
| ! | GTGAAAATGATAAGTGGGTT+AGG | + | chr2_1:78269528-78269547 | None:intergenic | 35.0% |
| ! | AAAGAAGGATTTGGTTGTTC+TGG | - | chr2_1:78269619-78269638 | Msa0227370:intron | 35.0% |
| !! | TTTGGTTGTTCTGGAACAAA+AGG | - | chr2_1:78269628-78269647 | Msa0227370:intron | 35.0% |
| AAACAATGGAATGCACCAAT+AGG | - | chr2_1:78269673-78269692 | Msa0227370:intron | 35.0% | |
| !! | ACCTGCAGTCAATTTTGAAA+GGG | + | chr2_1:78269971-78269990 | None:intergenic | 35.0% |
| ! | AACCTGCAGTCAATTTTGAA+AGG | + | chr2_1:78269972-78269991 | None:intergenic | 35.0% |
| ! | ATTTGGAATACTTGCAGAGA+AGG | + | chr2_1:78270023-78270042 | None:intergenic | 35.0% |
| ATGAGGTTATCTCTCATTTG+TGG | + | chr2_1:78270058-78270077 | None:intergenic | 35.0% | |
| TGCTGTCCATATCATAAATG+AGG | + | chr2_1:78270075-78270094 | None:intergenic | 35.0% | |
| TATCAGAATCAGAAGATGAG+GGG | + | chr2_1:78270105-78270124 | None:intergenic | 35.0% | |
| CTATCAGAATCAGAAGATGA+GGG | + | chr2_1:78270106-78270125 | None:intergenic | 35.0% | |
| ACTATCAGAATCAGAAGATG+AGG | + | chr2_1:78270107-78270126 | None:intergenic | 35.0% | |
| GTAGATTCAGAATTCTTGGT+TGG | + | chr2_1:78270175-78270194 | None:intergenic | 35.0% | |
| ! | TACGAGGTGACAATTGTTTT+TGG | + | chr2_1:78270336-78270355 | None:intergenic | 35.0% |
| AAAACAATTGTCACCTCGTA+AGG | - | chr2_1:78270336-78270355 | Msa0227370:intron | 35.0% | |
| !!! | CTCTTTTTTAAGTCCTTACG+AGG | + | chr2_1:78270352-78270371 | None:intergenic | 35.0% |
| AGTAAGTCAGCTCAAAATTC+TGG | - | chr2_1:78270435-78270454 | Msa0227370:intron | 35.0% | |
| CACGAATAAGCATATGTACA+TGG | + | chr2_1:78270486-78270505 | None:intergenic | 35.0% | |
| ATAGGTAGTCAACATTCTAC+AGG | - | chr2_1:78270638-78270657 | Msa0227370:CDS | 35.0% | |
| GTCAACATTCTACAGGTTTA+TGG | - | chr2_1:78270645-78270664 | Msa0227370:CDS | 35.0% | |
| ! | AAAATGAAGTCTCACTGGTT+TGG | + | chr2_1:78270881-78270900 | None:intergenic | 35.0% |
| GCTTCCATGAACAACTCTAA+CGG | - | chr2_1:78266408-78266427 | Msa0227370:three_prime_UTR | 40.0% | |
| GTAATGGTGAAGTAGCGTTA+GGG | + | chr2_1:78266437-78266456 | None:intergenic | 40.0% | |
| ! | GATCTCATTTTCGAAGCCAA+TGG | - | chr2_1:78266536-78266555 | Msa0227370:three_prime_UTR | 40.0% |
| GTGATGAACTTGCATTTGCT+TGG | - | chr2_1:78266634-78266653 | Msa0227370:three_prime_UTR | 40.0% | |
| ! | ATAGTCATTTGGGGTCTGTT+TGG | - | chr2_1:78267039-78267058 | Msa0227370:CDS | 40.0% |
| AGAAAGTGACGGTTACCAAA+AGG | + | chr2_1:78267130-78267149 | None:intergenic | 40.0% | |
| ATAAGCTCGTGAGAAAGTGA+CGG | + | chr2_1:78267141-78267160 | None:intergenic | 40.0% | |
| ! | GCTGATAAGCTAGCTTATAG+CGG | + | chr2_1:78267400-78267419 | None:intergenic | 40.0% |
| ! | GCTGATAAGCTAGCTTATAG+CGG | + | chr2_1:78267400-78267419 | None:intergenic | 40.0% |
| ATAGTAACCAATAGTCCGAG+TGG | - | chr2_1:78267575-78267594 | Msa0227370:CDS | 40.0% | |
| ATTACGGAATGATGCAGTTG+CGG | + | chr2_1:78267648-78267667 | None:intergenic | 40.0% | |
| GCTGTGACAATGTGTATTGT+TGG | + | chr2_1:78267949-78267968 | None:intergenic | 40.0% | |
| ATAAATTGCGGATGGGATCA+CGG | + | chr2_1:78267986-78268005 | None:intergenic | 40.0% | |
| GCACAGTTATAAATTGCGGA+TGG | + | chr2_1:78267994-78268013 | None:intergenic | 40.0% | |
| TGGTTGAGCAAGTTTCTCAA+TGG | - | chr2_1:78268072-78268091 | Msa0227370:intron | 40.0% | |
| GGTTGAGCAAGTTTCTCAAT+GGG | - | chr2_1:78268073-78268092 | Msa0227370:intron | 40.0% | |
| AAGAAGTTATCCACCAAGGA+CGG | - | chr2_1:78268379-78268398 | Msa0227370:CDS | 40.0% | |
| TAATTGCAATTCTCCGTCCT+TGG | + | chr2_1:78268395-78268414 | None:intergenic | 40.0% | |
| !! | AGTTTGTTGATTGCGGTTGT+TGG | - | chr2_1:78268443-78268462 | Msa0227370:intron | 40.0% |
| !!! | TATAGCTTTTCACTTGGTGC+TGG | - | chr2_1:78268542-78268561 | Msa0227370:intron | 40.0% |
| !!! | ATAGCTTTTCACTTGGTGCT+GGG | - | chr2_1:78268543-78268562 | Msa0227370:intron | 40.0% |
| !! | CACTCATTGACTTTGTTAGC+AGG | - | chr2_1:78268788-78268807 | Msa0227370:CDS | 40.0% |
| AGAAGGGTGACTTATATTGG+AGG | + | chr2_1:78268851-78268870 | None:intergenic | 40.0% | |
| ! | CTCTTGGTCTTCATTAGAGA+AGG | + | chr2_1:78268868-78268887 | None:intergenic | 40.0% |
| CTTCTCTAATGAAGACCAAG+AGG | - | chr2_1:78268866-78268885 | Msa0227370:CDS | 40.0% | |
| CTCAGAAGAGTTTAGCAGAT+TGG | + | chr2_1:78269434-78269453 | None:intergenic | 40.0% | |
| CAATCTGCTAAACTCTTCTG+AGG | - | chr2_1:78269432-78269451 | Msa0227370:intron | 40.0% | |
| !! | TTCTGAGGTTGCTAATAGCA+AGG | - | chr2_1:78269447-78269466 | Msa0227370:intron | 40.0% |
| GAAGTTGCAATTTCCAACTC+TGG | + | chr2_1:78269493-78269512 | None:intergenic | 40.0% | |
| !! | TGATAAGTGGGTTAGGAAAG+GGG | + | chr2_1:78269521-78269540 | None:intergenic | 40.0% |
| TGTGGCAGCTGAATTTCATT+TGG | + | chr2_1:78270040-78270059 | None:intergenic | 40.0% | |
| AGATCTTGTGCATTGTTGAC+AGG | + | chr2_1:78270133-78270152 | None:intergenic | 40.0% | |
| ! | GTTGGTAGAATGACATCAAC+AGG | + | chr2_1:78270157-78270176 | None:intergenic | 40.0% |
| !! | TAGCGGATTGAAATTTCGAG+CGG | + | chr2_1:78270258-78270277 | None:intergenic | 40.0% |
| AGTAGAAGACGATCTCTCAA+TGG | - | chr2_1:78270370-78270389 | Msa0227370:intron | 40.0% | |
| TGCGAGTGCAAATAAGAGAT+GGG | - | chr2_1:78270402-78270421 | Msa0227370:intron | 40.0% | |
| CGATGAAAATGAAGTCTCAC+TGG | + | chr2_1:78270886-78270905 | None:intergenic | 40.0% | |
| AATGAGCAGAGGTTCATTAG+AGG | + | chr2_1:78270935-78270954 | None:intergenic | 40.0% | |
| GTTGCCGTTAGAGTTGTTCA+TGG | + | chr2_1:78266415-78266434 | None:intergenic | 45.0% | |
| ! | GGTAATGGTGAAGTAGCGTT+AGG | + | chr2_1:78266438-78266457 | None:intergenic | 45.0% |
| GGTGGAATTGAAACGAGACA+TGG | + | chr2_1:78266459-78266478 | None:intergenic | 45.0% | |
| TGAAGGTTAATCCAGGCCAT+TGG | + | chr2_1:78266555-78266574 | None:intergenic | 45.0% | |
| ATGGCCTGGATTAACCTTCA+AGG | - | chr2_1:78266555-78266574 | Msa0227370:three_prime_UTR | 45.0% | |
| CCTGGATTAACCTTCAAGGA+CGG | - | chr2_1:78266559-78266578 | Msa0227370:three_prime_UTR | 45.0% | |
| CTGGATTAACCTTCAAGGAC+GGG | - | chr2_1:78266560-78266579 | Msa0227370:three_prime_UTR | 45.0% | |
| GCTTGAGTTAAGGAACACCA+AGG | + | chr2_1:78267502-78267521 | None:intergenic | 45.0% | |
| AACCAATAGTCCGAGTGGTA+AGG | - | chr2_1:78267580-78267599 | Msa0227370:CDS | 45.0% | |
| TTCCTTACCACTCGGACTAT+TGG | + | chr2_1:78267585-78267604 | None:intergenic | 45.0% | |
| ! | GGTTTGAGTTCCTTACCACT+CGG | + | chr2_1:78267593-78267612 | None:intergenic | 45.0% |
| TGCATCATTCCGTAATTGCG+TGG | - | chr2_1:78267652-78267671 | Msa0227370:intron | 45.0% | |
| !! | TGAGGTGTTGCACGGATATT+AGG | + | chr2_1:78267691-78267710 | None:intergenic | 45.0% |
| !! | CACTACATTGAGGTGTTGCA+CGG | + | chr2_1:78267699-78267718 | None:intergenic | 45.0% |
| GTGCAACACCTCAATGTAGT+GGG | - | chr2_1:78267698-78267717 | Msa0227370:intron | 45.0% | |
| ACACATTGTCACAGCCACAA+TGG | - | chr2_1:78267954-78267973 | Msa0227370:intron | 45.0% | |
| CCACATCAACCACTTGCTTA+CGG | + | chr2_1:78268023-78268042 | None:intergenic | 45.0% | |
| ! | CGTAAGCAAGTGGTTGATGT+GGG | - | chr2_1:78268021-78268040 | Msa0227370:intron | 45.0% |
| ! | TGCTTGATAACAGCTGATCC+TGG | + | chr2_1:78268291-78268310 | None:intergenic | 45.0% |
| TCAGCTGTTATCAAGCATGC+AGG | - | chr2_1:78268294-78268313 | Msa0227370:CDS | 45.0% | |
| TGTTCCAGTGTCGTCATTTG+CGG | + | chr2_1:78268750-78268769 | None:intergenic | 45.0% | |
| CAGACATTCTTCTCTCCTCT+TGG | + | chr2_1:78268884-78268903 | None:intergenic | 45.0% | |
| CAAGAGGAGAGAAGAATGTC+TGG | - | chr2_1:78268882-78268901 | Msa0227370:CDS | 45.0% | |
| ! | GAGAAGAATGTCTGGCTTGT+CGG | - | chr2_1:78268890-78268909 | Msa0227370:CDS | 45.0% |
| ! | AATGTCTGGCTTGTCGGATT+TGG | - | chr2_1:78268896-78268915 | Msa0227370:CDS | 45.0% |
| TGTAGCCTGTTTGCATTCCA+TGG | - | chr2_1:78269112-78269131 | Msa0227370:intron | 45.0% | |
| CAAGACCATGGAATGCAAAC+AGG | + | chr2_1:78269120-78269139 | None:intergenic | 45.0% | |
| TAAGAGGGACTGTGATGAGA+AGG | - | chr2_1:78269387-78269406 | Msa0227370:intron | 45.0% | |
| GCCCTTTCAAAATTGACTGC+AGG | - | chr2_1:78269967-78269986 | Msa0227370:intron | 45.0% | |
| TGCAGGTTATGCAGCTTTCA+AGG | - | chr2_1:78269984-78270003 | Msa0227370:intron | 45.0% | |
| GGAATACTTGCAGAGAAGGA+TGG | + | chr2_1:78270019-78270038 | None:intergenic | 45.0% | |
| GTGCGAGTGCAAATAAGAGA+TGG | - | chr2_1:78270401-78270420 | Msa0227370:intron | 45.0% | |
| TCGTGTTCATGTCTCCTTGT+AGG | - | chr2_1:78270501-78270520 | Msa0227370:CDS | 45.0% | |
| ACATTCCACAGCAACCTACA+AGG | + | chr2_1:78270518-78270537 | None:intergenic | 45.0% | |
| TGTGGAATGTAGCAGAGTAC+AGG | - | chr2_1:78270528-78270547 | Msa0227370:CDS | 45.0% | |
| TAGCCAGCTATTGCTGTCTT+TGG | - | chr2_1:78270765-78270784 | Msa0227370:CDS | 45.0% | |
| AGCCAGCTATTGCTGTCTTT+GGG | - | chr2_1:78270766-78270785 | Msa0227370:CDS | 45.0% | |
| ATCCCAAAGACAGCAATAGC+TGG | + | chr2_1:78270771-78270790 | None:intergenic | 45.0% | |
| ! | CATTTTCGAAGCCAATGGCC+TGG | - | chr2_1:78266541-78266560 | Msa0227370:three_prime_UTR | 50.0% |
| CCGTCCTTGAAGGTTAATCC+AGG | + | chr2_1:78266562-78266581 | None:intergenic | 50.0% | |
| CGTTAACAACCCGTCCTTGA+AGG | + | chr2_1:78266572-78266591 | None:intergenic | 50.0% | |
| TAACGCTGATGAAGCTAGCG+CGG | - | chr2_1:78266587-78266606 | Msa0227370:three_prime_UTR | 50.0% | |
| TGCTGCTGCTCAGTCCAAAA+AGG | - | chr2_1:78266707-78266726 | Msa0227370:intron | 50.0% | |
| TGGGGTCTGTTTGGTAAGAC+AGG | - | chr2_1:78267048-78267067 | Msa0227370:CDS | 50.0% | |
| AGGAACACCAAGGCTCTGTT+TGG | + | chr2_1:78267492-78267511 | None:intergenic | 50.0% | |
| ACTGCAACTGTGCACTTGGT+AGG | + | chr2_1:78267614-78267633 | None:intergenic | 50.0% | |
| CACAACTGCAACTGTGCACT+TGG | + | chr2_1:78267618-78267637 | None:intergenic | 50.0% | |
| CGTGCAACACCTCAATGTAG+TGG | - | chr2_1:78267697-78267716 | Msa0227370:intron | 50.0% | |
| CCATTGCACCCACTACATTG+AGG | + | chr2_1:78267709-78267728 | None:intergenic | 50.0% | |
| !! | CCTCAATGTAGTGGGTGCAA+TGG | - | chr2_1:78267706-78267725 | Msa0227370:intron | 50.0% |
| GATCACGGATATGGCCATTG+TGG | + | chr2_1:78267971-78267990 | None:intergenic | 50.0% | |
| TGCAGAACACCGTAAGCAAG+TGG | - | chr2_1:78268011-78268030 | Msa0227370:intron | 50.0% | |
| ! | CCGTAAGCAAGTGGTTGATG+TGG | - | chr2_1:78268020-78268039 | Msa0227370:intron | 50.0% |
| TTGCAATTCTCCGTCCTTGG+TGG | + | chr2_1:78268392-78268411 | None:intergenic | 50.0% | |
| CTATCCGCAAATGACGACAC+TGG | - | chr2_1:78268743-78268762 | Msa0227370:CDS | 50.0% | |
| ACTGGAGGCTCTTCTACTCA+AGG | + | chr2_1:78268817-78268836 | None:intergenic | 50.0% | |
| TTGAGTAGAAGAGCCTCCAG+TGG | - | chr2_1:78268816-78268835 | Msa0227370:CDS | 50.0% | |
| AAGAGCCTCCAGTGGAAATG+AGG | - | chr2_1:78268824-78268843 | Msa0227370:CDS | 50.0% | |
| TTGGAGGACCTCATTTCCAC+TGG | + | chr2_1:78268835-78268854 | None:intergenic | 50.0% | |
| CACATCTGCTGCTGATATCC+AGG | - | chr2_1:78268929-78268948 | Msa0227370:intron | 50.0% | |
| ! | TCTTGCGGTGCTTCTTTTCC+TGG | - | chr2_1:78269251-78269270 | Msa0227370:intron | 50.0% |
| ATCAGAAGATGAGGGGCTAG+TGG | + | chr2_1:78270098-78270117 | None:intergenic | 50.0% | |
| TGTCTCCTTGTAGGTTGCTG+TGG | - | chr2_1:78270510-78270529 | Msa0227370:CDS | 50.0% | |
| GAAAATGAGATCGGACGCCG+CGG | + | chr2_1:78266528-78266547 | None:intergenic | 55.0% | |
| GCAATGGACGCATTGCGCAT+CGG | - | chr2_1:78267722-78267741 | Msa0227370:intron | 55.0% | |
| ! | CATTGCGCATCGGTCGCATT+AGG | - | chr2_1:78267732-78267751 | Msa0227370:intron | 55.0% |
| TGCGGATGGGATCACGGATA+TGG | + | chr2_1:78267980-78267999 | None:intergenic | 55.0% | |
| GAGGACCTCATTTCCACTGG+AGG | + | chr2_1:78268832-78268851 | None:intergenic | 55.0% | |
| ! | TTGTGGCGGAGAGACGACGA+CGG | + | chr2_1:78266497-78266516 | None:intergenic | 60.0% |
| TCGTCGTCTCTCCGCCACAA+CGG | - | chr2_1:78266497-78266516 | Msa0227370:three_prime_UTR | 60.0% | |
| GCTAGCGCGGCTAGAACTGT+TGG | - | chr2_1:78266600-78266619 | Msa0227370:three_prime_UTR | 60.0% | |
| AGCGCGGCTAGAACTGTTGG+TGG | - | chr2_1:78266603-78266622 | Msa0227370:three_prime_UTR | 60.0% | |
| ! | GCGGCTAGAACTGTTGGTGG+TGG | - | chr2_1:78266606-78266625 | Msa0227370:three_prime_UTR | 60.0% |
| ! | GCATCGGTCGCATTAGGCTG+TGG | - | chr2_1:78267738-78267757 | Msa0227370:intron | 60.0% |
| CGGCGGGAGAGAGTGATTGG+TGG | + | chr2_1:78266477-78266496 | None:intergenic | 65.0% | |
| CGACGGCGGGAGAGAGTGAT+TGG | + | chr2_1:78266480-78266499 | None:intergenic | 65.0% | |
| TGGCGGAGAGACGACGACGG+CGG | + | chr2_1:78266494-78266513 | None:intergenic | 70.0% | |
| GGCGGAGAGACGACGACGGC+GGG | + | chr2_1:78266493-78266512 | None:intergenic | 75.0% | |
| CCGCGGCTCGACCGTTGTGG+CGG | + | chr2_1:78266511-78266530 | None:intergenic | 75.0% | |
| CCGCCACAACGGTCGAGCCG+CGG | - | chr2_1:78266508-78266527 | Msa0227370:three_prime_UTR | 75.0% | |
| ACGCCGCGGCTCGACCGTTG+TGG | + | chr2_1:78266514-78266533 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 78266264 | 78270955 | 78266264 | ID=Msa0227370;Name=Msa0227370 |
| chr2_1 | mRNA | 78266264 | 78270955 | 78266264 | ID=Msa0227370-mRNA-1;Parent=Msa0227370;Name=Msa0227370-mRNA-1;_AED=0.02;_eAED=0.02;_QI=150|1|1|1|0.83|0.71|7|439|452 |
| chr2_1 | exon | 78266264 | 78266696 | 78266264 | ID=Msa0227370-mRNA-1:exon:23864;Parent=Msa0227370-mRNA-1 |
| chr2_1 | exon | 78266784 | 78267230 | 78266784 | ID=Msa0227370-mRNA-1:exon:23863;Parent=Msa0227370-mRNA-1 |
| chr2_1 | exon | 78267570 | 78267656 | 78267570 | ID=Msa0227370-mRNA-1:exon:23862;Parent=Msa0227370-mRNA-1 |
| chr2_1 | exon | 78267751 | 78267870 | 78267751 | ID=Msa0227370-mRNA-1:exon:23861;Parent=Msa0227370-mRNA-1 |
| chr2_1 | exon | 78268269 | 78268409 | 78268269 | ID=Msa0227370-mRNA-1:exon:23860;Parent=Msa0227370-mRNA-1 |
| chr2_1 | exon | 78268715 | 78268927 | 78268715 | ID=Msa0227370-mRNA-1:exon:23859;Parent=Msa0227370-mRNA-1 |
| chr2_1 | exon | 78270449 | 78270955 | 78270449 | ID=Msa0227370-mRNA-1:exon:23858;Parent=Msa0227370-mRNA-1 |
| chr2_1 | five_prime_UTR | 78270806 | 78270955 | 78270806 | ID=Msa0227370-mRNA-1:five_prime_utr;Parent=Msa0227370-mRNA-1 |
| chr2_1 | CDS | 78270449 | 78270805 | 78270449 | ID=Msa0227370-mRNA-1:cds;Parent=Msa0227370-mRNA-1 |
| chr2_1 | CDS | 78268715 | 78268927 | 78268715 | ID=Msa0227370-mRNA-1:cds;Parent=Msa0227370-mRNA-1 |
| chr2_1 | CDS | 78268269 | 78268409 | 78268269 | ID=Msa0227370-mRNA-1:cds;Parent=Msa0227370-mRNA-1 |
| chr2_1 | CDS | 78267751 | 78267870 | 78267751 | ID=Msa0227370-mRNA-1:cds;Parent=Msa0227370-mRNA-1 |
| chr2_1 | CDS | 78267570 | 78267656 | 78267570 | ID=Msa0227370-mRNA-1:cds;Parent=Msa0227370-mRNA-1 |
| chr2_1 | CDS | 78266790 | 78267230 | 78266790 | ID=Msa0227370-mRNA-1:cds;Parent=Msa0227370-mRNA-1 |
| chr2_1 | three_prime_UTR | 78266784 | 78266789 | 78266784 | ID=Msa0227370-mRNA-1:three_prime_utr;Parent=Msa0227370-mRNA-1 |
| chr2_1 | three_prime_UTR | 78266264 | 78266696 | 78266264 | ID=Msa0227370-mRNA-1:three_prime_utr;Parent=Msa0227370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
