AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1375350


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1375350 MtrunA17_Chr8g0386961 99.303 287 2 0 1 287 1 287 0.0 581
Msa1375350 MtrunA17_Chr5g0397391 92.657 286 21 0 1 286 1 286 0.0 550
Msa1375350 MtrunA17_Chr5g0436701 86.364 286 37 1 3 286 4 289 0.0 510
Msa1375350 MtrunA17_Chr3g0113211 87.719 285 33 1 3 285 4 288 0.0 510
Msa1375350 MtrunA17_Chr4g0006001 82.986 288 45 2 2 286 3 289 2.69e-179 495
Msa1375350 MtrunA17_Chr7g0264111 71.218 271 68 3 16 280 6 272 4.15e-140 396
Msa1375350 MtrunA17_Chr1g0199731 71.923 260 66 2 27 280 14 272 2.27e-135 384
Msa1375350 MtrunA17_Chr3g0145671 70.455 264 77 1 21 284 6 268 3.69e-135 383
Msa1375350 MtrunA17_Chr2g0326621 64.261 291 84 3 1 284 1 278 4.89e-135 383
Msa1375350 MtrunA17_Chr4g0029071 66.917 266 81 2 25 284 12 276 4.24e-131 373
Msa1375350 MtrunA17_Chr1g0188771 36.638 232 128 7 52 278 21 238 4.66e-33 122
Msa1375350 MtrunA17_Chr2g0331261 35.897 234 135 5 47 277 15 236 2.46e-32 119
Msa1375350 MtrunA17_Chr6g0478191 38.723 235 128 7 52 282 21 243 8.03e-32 118
Msa1375350 MtrunA17_Chr4g0030861 34.034 238 142 5 41 275 10 235 4.28e-30 114
Msa1375350 MtrunA17_Chr8g0340161 35.470 234 134 6 46 274 11 232 7.18e-30 113
Msa1375350 MtrunA17_Chr1g0212671 34.426 244 140 7 41 278 10 239 4.71e-29 111
Msa1375350 MtrunA17_Chr7g0264961 33.333 243 138 7 42 277 11 236 3.80e-28 108
Msa1375350 MtrunA17_Chr7g0222791 33.884 242 144 6 41 278 10 239 7.58e-28 107
Msa1375350 MtrunA17_Chr5g0399341 36.726 226 127 7 52 274 19 231 7.25e-27 105
Msa1375350 MtrunA17_Chr1g0146161 33.333 231 127 7 52 275 19 229 2.25e-26 103
Msa1375350 MtrunA17_Chr1g0146171 33.906 233 123 8 52 275 19 229 1.61e-25 101
Msa1375350 MtrunA17_Chr5g0426131 30.263 228 144 6 47 274 32 244 1.08e-19 86.3
Msa1375350 MtrunA17_Chr8g0379901 28.014 282 174 9 11 287 2 259 1.15e-19 86.3
Msa1375350 MtrunA17_Chr5g0435051 28.646 192 124 4 84 275 68 246 1.42e-17 80.5
Msa1375350 MtrunA17_Chr2g0284591 31.944 216 125 6 55 267 39 235 4.06e-17 79.3
Msa1375350 MtrunA17_Chr8g0379911 27.917 240 156 6 49 287 35 258 8.02e-17 78.6
Msa1375350 MtrunA17_Chr2g0284631 27.391 230 145 6 41 267 80 290 9.51e-17 79.0
Msa1375350 MtrunA17_Chr4g0001221 28.205 234 140 8 34 267 68 273 1.83e-16 77.8
Msa1375350 MtrunA17_Chr4g0038591 27.692 195 119 7 99 279 95 281 2.46e-16 77.8
Msa1375350 MtrunA17_Chr2g0333771 30.986 213 128 7 56 267 84 278 3.20e-16 77.4
Msa1375350 MtrunA17_Chr7g0217331 28.390 236 149 7 50 284 35 251 4.46e-16 76.3
Msa1375350 MtrunA17_Chr3g0079421 29.688 192 122 4 84 275 54 232 4.55e-16 76.3
Msa1375350 MtrunA17_Chr4g0020781 32.432 185 101 6 100 278 29 195 4.75e-16 75.1
Msa1375350 MtrunA17_Chr2g0284611 30.736 231 141 8 50 279 36 248 9.61e-16 75.5
Msa1375350 MtrunA17_Chr2g0284581 29.577 213 134 5 55 267 41 237 1.18e-15 75.1
Msa1375350 MtrunA17_Chr4g0038611 28.125 192 122 5 99 279 32 218 1.28e-15 75.1
Msa1375350 MtrunA17_Chr4g0044201 26.549 226 133 6 55 277 38 233 5.33e-15 73.2
Msa1375350 MtrunA17_Chr2g0284601 30.726 179 111 3 89 267 24 189 6.27e-15 72.4
Msa1375350 MtrunA17_Chr1g0201331 29.204 226 140 8 56 279 78 285 2.34e-13 68.9
Msa1375350 MtrunA17_Chr1g0184541 25.333 225 149 6 49 272 59 265 2.59e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1375350 AT4G00430.1 85.263 285 41 1 3 287 4 287 0.0 504
Msa1375350 AT2G45960.1 86.316 285 37 2 3 287 4 286 0.0 502
Msa1375350 AT4G23400.1 87.719 285 34 1 3 287 4 287 9.77e-175 484
Msa1375350 AT1G01620.1 87.018 285 35 2 3 287 4 286 6.07e-173 479
Msa1375350 AT3G61430.2 85.965 285 38 2 3 287 4 286 2.09e-171 476
Msa1375350 AT3G61430.1 85.965 285 38 2 3 287 4 286 2.09e-171 476
Msa1375350 AT2G45960.2 86.614 254 32 2 3 256 4 255 6.42e-161 448
Msa1375350 AT2G45960.3 86.614 254 32 2 3 256 4 255 1.71e-159 446
Msa1375350 AT2G37170.2 71.538 260 67 3 27 280 55 313 3.86e-134 383
Msa1375350 AT4G35100.1 71.875 256 71 1 29 284 15 269 5.26e-134 380
Msa1375350 AT4G35100.2 71.875 256 71 1 29 284 15 269 5.26e-134 380
Msa1375350 AT1G01620.2 86.512 215 28 1 73 287 1 214 5.78e-134 378
Msa1375350 AT2G37170.1 71.538 260 67 3 27 280 12 270 9.39e-134 380
Msa1375350 AT3G53420.1 71.154 260 68 2 27 280 14 272 1.10e-133 380
Msa1375350 AT3G53420.2 71.154 260 68 2 27 280 14 272 1.10e-133 380
Msa1375350 AT2G37180.1 71.538 260 67 3 27 280 12 270 1.18e-133 380
Msa1375350 AT2G16850.1 71.875 256 71 1 29 284 13 267 5.38e-133 378
Msa1375350 AT5G60660.1 70.342 263 71 2 28 284 15 276 1.55e-132 377
Msa1375350 AT3G54820.1 67.778 270 80 2 17 280 3 271 4.24e-132 376
Msa1375350 AT2G39010.1 65.950 279 82 3 12 284 4 275 6.30e-131 373
Msa1375350 AT4G00430.2 82.547 212 36 1 3 214 4 214 2.98e-127 361
Msa1375350 AT2G39010.2 63.000 200 67 2 17 210 3 201 2.62e-84 252
Msa1375350 AT4G01470.1 35.146 239 140 5 42 277 11 237 2.57e-32 120
Msa1375350 AT1G73190.1 35.656 244 128 8 52 282 24 251 1.75e-31 118
Msa1375350 AT1G17810.1 36.596 235 129 5 52 278 24 246 2.57e-31 117
Msa1375350 AT5G47450.1 37.021 235 133 7 43 274 10 232 1.95e-30 115
Msa1375350 AT3G16240.1 35.931 231 133 6 47 274 14 232 7.03e-30 113
Msa1375350 AT3G26520.1 33.624 229 137 5 52 277 22 238 8.82e-29 110
Msa1375350 AT2G36830.1 33.469 245 136 8 41 276 10 236 4.83e-28 108
Msa1375350 AT4G17340.1 36.170 235 135 7 43 274 10 232 3.16e-27 106
Msa1375350 AT2G25810.1 33.478 230 135 8 52 278 19 233 3.17e-24 98.6
Msa1375350 AT3G47440.1 31.687 243 135 8 47 278 18 240 4.38e-24 98.6
Msa1375350 AT4G19030.1 26.712 292 185 8 3 287 13 282 3.91e-19 85.9
Msa1375350 AT1G31885.1 31.111 225 142 7 45 267 36 249 4.03e-18 83.2
Msa1375350 AT5G37820.1 28.571 217 129 7 55 266 46 241 2.60e-17 80.5
Msa1375350 AT5G37820.2 28.571 217 129 7 55 266 82 277 2.90e-17 80.9
Msa1375350 AT4G18910.1 27.027 259 165 8 38 287 36 279 1.54e-15 75.5
Msa1375350 AT2G34390.1 26.336 262 162 9 22 277 27 263 2.02e-15 75.1
Msa1375350 AT1G31885.2 31.351 185 117 5 85 267 19 195 5.50e-15 73.6
Msa1375350 AT3G06100.1 29.707 239 140 8 52 286 46 260 1.66e-14 72.4
Msa1375350 AT3G06100.2 29.661 236 138 8 55 286 1 212 4.19e-14 70.5
Msa1375350 AT2G34390.2 27.074 229 145 8 55 277 9 221 1.21e-13 69.7
Msa1375350 AT4G10380.1 26.022 269 166 8 21 273 32 283 2.21e-13 69.7
Msa1375350 AT5G37810.1 26.923 234 154 7 55 287 46 263 3.06e-13 68.9

Find 91 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTAATTTCATAGTGTATT+TGG 0.069540 tig0019653:+60240 Msa1375350:three_prime_UTR
CAAGGTATTGCTTGGTCTTT+TGG 0.121056 tig0019653:+58738 Msa1375350:CDS
CATTGGGTTTGCTGTGTTCT+TGG 0.191867 tig0019653:+59552 Msa1375350:CDS
TTCTGGGTTGGACCATTTAT+TGG 0.216605 tig0019653:+59786 Msa1375350:CDS
GCAAGAGCAGCTCCAATAAA+TGG 0.282926 tig0019653:-59798 None:intergenic
GAGCTGCCATCATCTTTAAC+AGG 0.292037 tig0019653:+59632 Msa1375350:CDS
GCTAGGTATGAACTGTTTAA+AGG 0.293383 tig0019653:+59033 Msa1375350:CDS
TTATTCTGCGTGTGTTACTA+TGG 0.311106 tig0019653:-60142 None:intergenic
TACTGCACTGCTGGAATATC+AGG 0.324491 tig0019653:+58783 Msa1375350:CDS
GTGTAAATTGTTTCCTTCAT+TGG 0.332578 tig0019653:+59976 Msa1375350:three_prime_UTR
TTTATGTTAATCCATGATTT+GGG 0.344016 tig0019653:+59954 Msa1375350:three_prime_UTR
TTAGTTGACTATTGTACATT+TGG 0.346574 tig0019653:-60103 None:intergenic
TGTTCCTCTGTTGGCATTCA+AGG 0.347490 tig0019653:+58720 Msa1375350:CDS
TGCTGTGTTCTTGGTCCACT+TGG 0.359026 tig0019653:+59561 Msa1375350:CDS
CTTTGGGCTGCTGTCCCTAA+TGG 0.359259 tig0019653:-58531 None:intergenic
GCCCTTGTCTACTGCACTGC+TGG 0.363459 tig0019653:+58774 Msa1375350:CDS
GTAGTCTTTGCTGTCACTTT+GGG 0.366503 tig0019653:-58547 None:intergenic
GTTTATTCAAATATATTAAG+AGG 0.379590 tig0019653:-60218 None:intergenic
TTAATGCCTGTTCCTGTGAT+TGG 0.393415 tig0019653:-59592 None:intergenic
ATAAACCCTGCTGTGACATT+TGG 0.394638 tig0019653:+58901 Msa1375350:CDS
TCTTTAACAGGGACTTTGCT+TGG 0.396893 tig0019653:+59644 Msa1375350:CDS
GACACCCATGACAGTCAAAA+TGG 0.399657 tig0019653:-58679 None:intergenic
TCTTGGCTCCTCTTCCCATT+GGG 0.400657 tig0019653:+59536 Msa1375350:CDS
TTCTCAGAGAGGCAGCCATT+AGG 0.401275 tig0019653:+58516 Msa1375350:CDS
CTTGGTGCTATTTGTGGTGC+TGG 0.401687 tig0019653:+58985 Msa1375350:CDS
CAATGTCTTGGTGCTATTTG+TGG 0.402335 tig0019653:+58979 Msa1375350:CDS
AAGAAGAGAGAGAGTAAGAA+TGG 0.404359 tig0019653:+58458 Msa1375350:exon
AATGCCAACAGAGGAACATT+TGG 0.407248 tig0019653:-58715 None:intergenic
TCTCAGAGAGGCAGCCATTA+GGG 0.408528 tig0019653:+58517 Msa1375350:CDS
AAGGAGGAAGATGTGAAAGT+TGG 0.409979 tig0019653:+58483 Msa1375350:CDS
ATCTTGGCTCCTCTTCCCAT+TGG 0.412469 tig0019653:+59535 Msa1375350:CDS
TGTAGTCTTTGCTGTCACTT+TGG 0.414094 tig0019653:-58548 None:intergenic
AACAATTTACACCCAAATCA+TGG 0.416415 tig0019653:-59965 None:intergenic
CTTTAACAGGGACTTTGCTT+GGG 0.419659 tig0019653:+59645 Msa1375350:CDS
ACCATTCCAATCACAGGAAC+AGG 0.439708 tig0019653:+59586 Msa1375350:CDS
GAATGGCTCGGATGACAATC+TGG 0.440088 tig0019653:-59833 None:intergenic
TTGTGGTGCTGGTGTGGTGA+AGG 0.443603 tig0019653:+58996 Msa1375350:CDS
TTGGCATTCAAGGTATTGCT+TGG 0.445934 tig0019653:+58730 Msa1375350:CDS
AAACGTGATATCTGCACTCT+TGG 0.458620 tig0019653:-60073 None:intergenic
CCATCACCTTTAGTGTATCC+AGG 0.469714 tig0019653:-59075 None:intergenic
TGTGGTGCTGGTGTGGTGAA+GGG 0.479619 tig0019653:+58997 Msa1375350:CDS
CCAGCTCCATTCTTTGAACC+TGG 0.482414 tig0019653:+58582 Msa1375350:CDS
GTGAATCCTGGATACACTAA+AGG 0.482977 tig0019653:+59069 Msa1375350:CDS
GACCATGACTTGAGCTCACC+AGG 0.486918 tig0019653:-58600 None:intergenic
TTCTTCTAAGTGACCAATGA+AGG 0.498573 tig0019653:-59989 None:intergenic
TTTATTCAAATATATTAAGA+GGG 0.499188 tig0019653:-60217 None:intergenic
AGCTCACCAGGTTCAAAGAA+TGG 0.499372 tig0019653:-58588 None:intergenic
AGAGTCTCTAGCATTTCTCT+TGG 0.499778 tig0019653:-59160 None:intergenic
AAAGTCCCTGTTAAAGATGA+TGG 0.503711 tig0019653:-59638 None:intergenic
AGAGAGAGTAAGAATGGAGA+AGG 0.505737 tig0019653:+58464 Msa1375350:exon
CAGTCAAAATGGTGATGTAA+AGG 0.509320 tig0019653:-58668 None:intergenic
AACAGACCAAATGTCACAGC+AGG 0.509644 tig0019653:-58907 None:intergenic
ACCTCCAAATGTTCCTCTGT+TGG 0.509764 tig0019653:+58711 Msa1375350:CDS
GAGAGTAAGAATGGAGAAGG+AGG 0.517379 tig0019653:+58467 Msa1375350:exon
GCAGCTCCAAGACTCCTAGC+TGG 0.521224 tig0019653:-59616 None:intergenic
GCCAACAGAGGAACATTTGG+AGG 0.524215 tig0019653:-58712 None:intergenic
TGCTATTTGTGGTGCTGGTG+TGG 0.526494 tig0019653:+58990 Msa1375350:CDS
ATTGGTCACTTAGAAGAATG+TGG 0.527381 tig0019653:+59994 Msa1375350:three_prime_UTR
ATTAACCCAGCTAGGAGTCT+TGG 0.528660 tig0019653:+59610 Msa1375350:CDS
TTCCAGCAGTGCAGTAGACA+AGG 0.538007 tig0019653:-58776 None:intergenic
GGACTTGGAGCTGAGATTGT+TGG 0.540230 tig0019653:+59096 Msa1375350:CDS
AAGAACACAGCAAACCCAAT+GGG 0.541932 tig0019653:-59550 None:intergenic
TCAAAGAATGGAGCTGGTGG+TGG 0.542478 tig0019653:-58576 None:intergenic
CCTCAGGTCCTTGTCTTGAA+AGG 0.542853 tig0019653:-59855 None:intergenic
CCAGGTTCAAAGAATGGAGC+TGG 0.545752 tig0019653:-58582 None:intergenic
ACAGCAAACCCAATGGGAAG+AGG 0.548821 tig0019653:-59544 None:intergenic
TTGCAGTGGATATTCTGGGT+TGG 0.548834 tig0019653:+59774 Msa1375350:intron
TACACTAAAGGTGATGGACT+TGG 0.556791 tig0019653:+59081 Msa1375350:CDS
CCTGGATACACTAAAGGTGA+TGG 0.566370 tig0019653:+59075 Msa1375350:CDS
CAAGAACACAGCAAACCCAA+TGG 0.568082 tig0019653:-59551 None:intergenic
TACATTGTGATGCAATGTCT+TGG 0.571531 tig0019653:+58967 Msa1375350:CDS
GATGTAAAGGAACAAGAAAG+TGG 0.573621 tig0019653:-58655 None:intergenic
TTGTCTTGAAAGGAATGGCT+CGG 0.574695 tig0019653:-59845 None:intergenic
GGTCCTTGTCTTGAAAGGAA+TGG 0.577153 tig0019653:-59850 None:intergenic
CAGCTCCAAGACTCCTAGCT+GGG 0.583912 tig0019653:-59615 None:intergenic
CAAACACAGATAAGAGCCTC+AGG 0.584886 tig0019653:-59871 None:intergenic
TTGGCTACCATTCCAATCAC+AGG 0.604120 tig0019653:+59580 Msa1375350:CDS
AACCTGGTGAGCTCAAGTCA+TGG 0.607189 tig0019653:+58598 Msa1375350:CDS
CTGCGTGTGTTACTATGGAA+TGG 0.626123 tig0019653:-60137 None:intergenic
AGCTGCCATCATCTTTAACA+GGG 0.632590 tig0019653:+59633 Msa1375350:CDS
CCTTTCAAGACAAGGACCTG+AGG 0.635312 tig0019653:+59855 Msa1375350:CDS
GCCTGTTCCTGTGATTGGAA+TGG 0.635477 tig0019653:-59587 None:intergenic
GAACAGGCATTAACCCAGCT+AGG 0.644423 tig0019653:+59602 Msa1375350:CDS
TCCAGCAGTGCAGTAGACAA+GGG 0.651759 tig0019653:-58775 None:intergenic
GGTTCAAAGAATGGAGCTGG+TGG 0.653748 tig0019653:-58579 None:intergenic
GAGCCATTCCTTTCAAGACA+AGG 0.654804 tig0019653:+59847 Msa1375350:CDS
AATACCTTGAATGCCAACAG+AGG 0.688113 tig0019653:-58724 None:intergenic
ACAGACCAAATGTCACAGCA+GGG 0.700234 tig0019653:-58906 None:intergenic
GAGCAAACAAATTCTCAGAG+AGG 0.712701 tig0019653:+58505 Msa1375350:CDS
AGGTATGAACTGTTTAAAGG+TGG 0.726401 tig0019653:+59036 Msa1375350:CDS
TGATTGGAATGGTAGCCAAG+TGG 0.737998 tig0019653:-59576 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTGTTCATAAAAATA+AGG - tig0019653:59694-59713 None:intergenic 10.0%
!! TTTATTCAAATATATTAAGA+GGG - tig0019653:60220-60239 None:intergenic 10.0%
!!! AAATTTTGTTCATAAAAATA+AGG - tig0019653:59694-59713 None:intergenic 10.0%
!! TTTATTCAAATATATTAAGA+GGG - tig0019653:60220-60239 None:intergenic 10.0%
!! AAGAAATCAAAAAATAGAAA+AGG - tig0019653:59209-59228 None:intergenic 15.0%
!!! ACTTATAATTTATTTTCCTA+AGG - tig0019653:59262-59281 None:intergenic 15.0%
!!! CTATATATTTTAGTTATTTG+TGG + tig0019653:59357-59376 Msa1375350:intron 15.0%
!! GTTTATTCAAATATATTAAG+AGG - tig0019653:60221-60240 None:intergenic 15.0%
!! AAGAAATCAAAAAATAGAAA+AGG - tig0019653:59209-59228 None:intergenic 15.0%
!!! ACTTATAATTTATTTTCCTA+AGG - tig0019653:59262-59281 None:intergenic 15.0%
!!! CTATATATTTTAGTTATTTG+TGG + tig0019653:59357-59376 Msa1375350:intron 15.0%
!! GTTTATTCAAATATATTAAG+AGG - tig0019653:60221-60240 None:intergenic 15.0%
!!! TTTTATGTTAATCCATGATT+TGG + tig0019653:59953-59972 Msa1375350:three_prime_UTR 20.0%
!! TTTATGTTAATCCATGATTT+GGG + tig0019653:59954-59973 Msa1375350:three_prime_UTR 20.0%
!!! TTTTATGTTAATCCATGATT+TGG + tig0019653:59953-59972 Msa1375350:three_prime_UTR 20.0%
!! TTTATGTTAATCCATGATTT+GGG + tig0019653:59954-59973 Msa1375350:three_prime_UTR 20.0%
! ATGTTAATAGCCAAGAATAA+TGG + tig0019653:58845-58864 Msa1375350:intron 25.0%
!!! CATTTTTTTTCCTTCCAATT+AGG + tig0019653:59292-59311 Msa1375350:intron 25.0%
! CAAAGTTAAAAAGTCCTAAT+TGG - tig0019653:59309-59328 None:intergenic 25.0%
!!! CAATTAGGACTTTTTAACTT+TGG + tig0019653:59307-59326 Msa1375350:intron 25.0%
! TTCTAACTCTAATTTCAATG+TGG + tig0019653:59489-59508 Msa1375350:intron 25.0%
!! TTCAATGTGGTTATTCTTTT+TGG + tig0019653:59502-59521 Msa1375350:intron 25.0%
!! TCAATGTGGTTATTCTTTTT+GGG + tig0019653:59503-59522 Msa1375350:intron 25.0%
! TTAGTTGACTATTGTACATT+TGG - tig0019653:60106-60125 None:intergenic 25.0%
!! AAACTTTTCCAATAAAAGCT+TGG + tig0019653:60164-60183 Msa1375350:three_prime_UTR 25.0%
! CTCTAATTTCATAGTGTATT+TGG + tig0019653:60240-60259 Msa1375350:three_prime_UTR 25.0%
! ATGTTAATAGCCAAGAATAA+TGG + tig0019653:58845-58864 Msa1375350:intron 25.0%
!!! CATTTTTTTTCCTTCCAATT+AGG + tig0019653:59292-59311 Msa1375350:intron 25.0%
! CAAAGTTAAAAAGTCCTAAT+TGG - tig0019653:59309-59328 None:intergenic 25.0%
!!! CAATTAGGACTTTTTAACTT+TGG + tig0019653:59307-59326 Msa1375350:intron 25.0%
! TTCTAACTCTAATTTCAATG+TGG + tig0019653:59489-59508 Msa1375350:intron 25.0%
!! TTCAATGTGGTTATTCTTTT+TGG + tig0019653:59502-59521 Msa1375350:intron 25.0%
!! TCAATGTGGTTATTCTTTTT+GGG + tig0019653:59503-59522 Msa1375350:intron 25.0%
! TTAGTTGACTATTGTACATT+TGG - tig0019653:60106-60125 None:intergenic 25.0%
!! AAACTTTTCCAATAAAAGCT+TGG + tig0019653:60164-60183 Msa1375350:three_prime_UTR 25.0%
! CTCTAATTTCATAGTGTATT+TGG + tig0019653:60240-60259 Msa1375350:three_prime_UTR 25.0%
AAAAGGAAATGAAGACATAC+AGG - tig0019653:59192-59211 None:intergenic 30.0%
GTTAAAAAGTCCTAATTGGA+AGG - tig0019653:59305-59324 None:intergenic 30.0%
! GATCTATTTTCTGCATATAC+TGG + tig0019653:59429-59448 Msa1375350:intron 30.0%
TTTCTGCATATACTGGTATA+TGG + tig0019653:59436-59455 Msa1375350:intron 30.0%
! CAATGTGGTTATTCTTTTTG+GGG + tig0019653:59504-59523 Msa1375350:intron 30.0%
!! TTTTGGGGAATTATAGATCT+TGG + tig0019653:59519-59538 Msa1375350:intron 30.0%
AAGGTGATAGAAAACATACA+TGG - tig0019653:59675-59694 None:intergenic 30.0%
!!! TTATTGATGATGTTTTGCAG+TGG + tig0019653:59760-59779 Msa1375350:intron 30.0%
!! TTGTGTCGTCTTTTTCATTA+AGG + tig0019653:59913-59932 Msa1375350:three_prime_UTR 30.0%
!! TGTGTCGTCTTTTTCATTAA+GGG + tig0019653:59914-59933 Msa1375350:three_prime_UTR 30.0%
AACAATTTACACCCAAATCA+TGG - tig0019653:59968-59987 None:intergenic 30.0%
GTGTAAATTGTTTCCTTCAT+TGG + tig0019653:59976-59995 Msa1375350:three_prime_UTR 30.0%
! TGCATTTTCCAAGCTTTTAT+TGG - tig0019653:60175-60194 None:intergenic 30.0%
AAAAGGAAATGAAGACATAC+AGG - tig0019653:59192-59211 None:intergenic 30.0%
GTTAAAAAGTCCTAATTGGA+AGG - tig0019653:59305-59324 None:intergenic 30.0%
! GATCTATTTTCTGCATATAC+TGG + tig0019653:59429-59448 Msa1375350:intron 30.0%
TTTCTGCATATACTGGTATA+TGG + tig0019653:59436-59455 Msa1375350:intron 30.0%
! CAATGTGGTTATTCTTTTTG+GGG + tig0019653:59504-59523 Msa1375350:intron 30.0%
!! TTTTGGGGAATTATAGATCT+TGG + tig0019653:59519-59538 Msa1375350:intron 30.0%
AAGGTGATAGAAAACATACA+TGG - tig0019653:59675-59694 None:intergenic 30.0%
!!! TTATTGATGATGTTTTGCAG+TGG + tig0019653:59760-59779 Msa1375350:intron 30.0%
!! TTGTGTCGTCTTTTTCATTA+AGG + tig0019653:59913-59932 Msa1375350:three_prime_UTR 30.0%
!! TGTGTCGTCTTTTTCATTAA+GGG + tig0019653:59914-59933 Msa1375350:three_prime_UTR 30.0%
AACAATTTACACCCAAATCA+TGG - tig0019653:59968-59987 None:intergenic 30.0%
GTGTAAATTGTTTCCTTCAT+TGG + tig0019653:59976-59995 Msa1375350:three_prime_UTR 30.0%
! TGCATTTTCCAAGCTTTTAT+TGG - tig0019653:60175-60194 None:intergenic 30.0%
AAGAAGAGAGAGAGTAAGAA+TGG + tig0019653:58458-58477 Msa1375350:exon 35.0%
GATGTAAAGGAACAAGAAAG+TGG - tig0019653:58658-58677 None:intergenic 35.0%
! CAGTCAAAATGGTGATGTAA+AGG - tig0019653:58671-58690 None:intergenic 35.0%
!!! ATCACCATTTTGACTGTCAT+GGG + tig0019653:58675-58694 Msa1375350:CDS 35.0%
!!! AAGGTATTGCTTGGTCTTTT+GGG + tig0019653:58739-58758 Msa1375350:CDS 35.0%
CACAGATCTACCATTATTCT+TGG - tig0019653:58858-58877 None:intergenic 35.0%
!! ATCTGTGTGTTGTTTGTGAT+AGG + tig0019653:58871-58890 Msa1375350:intron 35.0%
! TGTGACATTTGGTCTGTTTT+TGG + tig0019653:58912-58931 Msa1375350:CDS 35.0%
TACATTGTGATGCAATGTCT+TGG + tig0019653:58967-58986 Msa1375350:CDS 35.0%
GCTAGGTATGAACTGTTTAA+AGG + tig0019653:59033-59052 Msa1375350:CDS 35.0%
AGGTATGAACTGTTTAAAGG+TGG + tig0019653:59036-59055 Msa1375350:CDS 35.0%
AAAGTCCCTGTTAAAGATGA+TGG - tig0019653:59641-59660 None:intergenic 35.0%
! ATGTTTTGCAGTGGATATTC+TGG + tig0019653:59769-59788 Msa1375350:intron 35.0%
! TGTTTTGCAGTGGATATTCT+GGG + tig0019653:59770-59789 Msa1375350:intron 35.0%
TTCTTCTAAGTGACCAATGA+AGG - tig0019653:59992-60011 None:intergenic 35.0%
ATTGGTCACTTAGAAGAATG+TGG + tig0019653:59994-60013 Msa1375350:three_prime_UTR 35.0%
! TGCACTCTTGGAATTTTGAA+AGG - tig0019653:60064-60083 None:intergenic 35.0%
! TTATTCTGCGTGTGTTACTA+TGG - tig0019653:60145-60164 None:intergenic 35.0%
AAGAAGAGAGAGAGTAAGAA+TGG + tig0019653:58458-58477 Msa1375350:exon 35.0%
GATGTAAAGGAACAAGAAAG+TGG - tig0019653:58658-58677 None:intergenic 35.0%
! CAGTCAAAATGGTGATGTAA+AGG - tig0019653:58671-58690 None:intergenic 35.0%
!!! ATCACCATTTTGACTGTCAT+GGG + tig0019653:58675-58694 Msa1375350:CDS 35.0%
!!! AAGGTATTGCTTGGTCTTTT+GGG + tig0019653:58739-58758 Msa1375350:CDS 35.0%
CACAGATCTACCATTATTCT+TGG - tig0019653:58858-58877 None:intergenic 35.0%
!! ATCTGTGTGTTGTTTGTGAT+AGG + tig0019653:58871-58890 Msa1375350:intron 35.0%
! TGTGACATTTGGTCTGTTTT+TGG + tig0019653:58912-58931 Msa1375350:CDS 35.0%
TACATTGTGATGCAATGTCT+TGG + tig0019653:58967-58986 Msa1375350:CDS 35.0%
GCTAGGTATGAACTGTTTAA+AGG + tig0019653:59033-59052 Msa1375350:CDS 35.0%
AGGTATGAACTGTTTAAAGG+TGG + tig0019653:59036-59055 Msa1375350:CDS 35.0%
AAAGTCCCTGTTAAAGATGA+TGG - tig0019653:59641-59660 None:intergenic 35.0%
! ATGTTTTGCAGTGGATATTC+TGG + tig0019653:59769-59788 Msa1375350:intron 35.0%
! TGTTTTGCAGTGGATATTCT+GGG + tig0019653:59770-59789 Msa1375350:intron 35.0%
TTCTTCTAAGTGACCAATGA+AGG - tig0019653:59992-60011 None:intergenic 35.0%
ATTGGTCACTTAGAAGAATG+TGG + tig0019653:59994-60013 Msa1375350:three_prime_UTR 35.0%
! TGCACTCTTGGAATTTTGAA+AGG - tig0019653:60064-60083 None:intergenic 35.0%
! TTATTCTGCGTGTGTTACTA+TGG - tig0019653:60145-60164 None:intergenic 35.0%
AGAGAGAGTAAGAATGGAGA+AGG + tig0019653:58464-58483 Msa1375350:exon 40.0%
AAGGAGGAAGATGTGAAAGT+TGG + tig0019653:58483-58502 Msa1375350:CDS 40.0%
GAGCAAACAAATTCTCAGAG+AGG + tig0019653:58505-58524 Msa1375350:CDS 40.0%
!! GTAGTCTTTGCTGTCACTTT+GGG - tig0019653:58550-58569 None:intergenic 40.0%
! TGTAGTCTTTGCTGTCACTT+TGG - tig0019653:58551-58570 None:intergenic 40.0%
! TCATGGTCTTTTTACAGAGC+TGG + tig0019653:58615-58634 Msa1375350:CDS 40.0%
!!! CATCACCATTTTGACTGTCA+TGG + tig0019653:58674-58693 Msa1375350:CDS 40.0%
AATGCCAACAGAGGAACATT+TGG - tig0019653:58718-58737 None:intergenic 40.0%
AATACCTTGAATGCCAACAG+AGG - tig0019653:58727-58746 None:intergenic 40.0%
!! TTGGCATTCAAGGTATTGCT+TGG + tig0019653:58730-58749 Msa1375350:CDS 40.0%
!!! CAAGGTATTGCTTGGTCTTT+TGG + tig0019653:58738-58757 Msa1375350:CDS 40.0%
!! AGGTATTGCTTGGTCTTTTG+GGG + tig0019653:58740-58759 Msa1375350:CDS 40.0%
!! TGTGTGTTGTTTGTGATAGG+TGG + tig0019653:58874-58893 Msa1375350:intron 40.0%
ATAAACCCTGCTGTGACATT+TGG + tig0019653:58901-58920 Msa1375350:CDS 40.0%
!!! CATTTGGTCTGTTTTTGGCA+AGG + tig0019653:58917-58936 Msa1375350:CDS 40.0%
!! CAATGTCTTGGTGCTATTTG+TGG + tig0019653:58979-58998 Msa1375350:CDS 40.0%
!!! AGGGTTTTGAAGGTAATGCT+AGG + tig0019653:59016-59035 Msa1375350:CDS 40.0%
! GGTGCTAATTTTGTGAATCC+TGG + tig0019653:59057-59076 Msa1375350:CDS 40.0%
GTGAATCCTGGATACACTAA+AGG + tig0019653:59069-59088 Msa1375350:CDS 40.0%
!! TACACTAAAGGTGATGGACT+TGG + tig0019653:59081-59100 Msa1375350:CDS 40.0%
AGAGTCTCTAGCATTTCTCT+TGG - tig0019653:59163-59182 None:intergenic 40.0%
! GTGTGCTGAAAGTTTTCCTT+AGG + tig0019653:59243-59262 Msa1375350:intron 40.0%
AAGAACACAGCAAACCCAAT+GGG - tig0019653:59553-59572 None:intergenic 40.0%
TTAATGCCTGTTCCTGTGAT+TGG - tig0019653:59595-59614 None:intergenic 40.0%
AGCTGCCATCATCTTTAACA+GGG + tig0019653:59633-59652 Msa1375350:CDS 40.0%
TCTTTAACAGGGACTTTGCT+TGG + tig0019653:59644-59663 Msa1375350:CDS 40.0%
CTTTAACAGGGACTTTGCTT+GGG + tig0019653:59645-59664 Msa1375350:CDS 40.0%
! TTCTGGGTTGGACCATTTAT+TGG + tig0019653:59786-59805 Msa1375350:CDS 40.0%
TTGTCTTGAAAGGAATGGCT+CGG - tig0019653:59848-59867 None:intergenic 40.0%
AAACGTGATATCTGCACTCT+TGG - tig0019653:60076-60095 None:intergenic 40.0%
AGAGAGAGTAAGAATGGAGA+AGG + tig0019653:58464-58483 Msa1375350:exon 40.0%
AAGGAGGAAGATGTGAAAGT+TGG + tig0019653:58483-58502 Msa1375350:CDS 40.0%
GAGCAAACAAATTCTCAGAG+AGG + tig0019653:58505-58524 Msa1375350:CDS 40.0%
!! GTAGTCTTTGCTGTCACTTT+GGG - tig0019653:58550-58569 None:intergenic 40.0%
! TGTAGTCTTTGCTGTCACTT+TGG - tig0019653:58551-58570 None:intergenic 40.0%
! TCATGGTCTTTTTACAGAGC+TGG + tig0019653:58615-58634 Msa1375350:CDS 40.0%
!!! CATCACCATTTTGACTGTCA+TGG + tig0019653:58674-58693 Msa1375350:CDS 40.0%
AATGCCAACAGAGGAACATT+TGG - tig0019653:58718-58737 None:intergenic 40.0%
AATACCTTGAATGCCAACAG+AGG - tig0019653:58727-58746 None:intergenic 40.0%
!! TTGGCATTCAAGGTATTGCT+TGG + tig0019653:58730-58749 Msa1375350:CDS 40.0%
!!! CAAGGTATTGCTTGGTCTTT+TGG + tig0019653:58738-58757 Msa1375350:CDS 40.0%
!! AGGTATTGCTTGGTCTTTTG+GGG + tig0019653:58740-58759 Msa1375350:CDS 40.0%
!! TGTGTGTTGTTTGTGATAGG+TGG + tig0019653:58874-58893 Msa1375350:intron 40.0%
ATAAACCCTGCTGTGACATT+TGG + tig0019653:58901-58920 Msa1375350:CDS 40.0%
!!! CATTTGGTCTGTTTTTGGCA+AGG + tig0019653:58917-58936 Msa1375350:CDS 40.0%
!! CAATGTCTTGGTGCTATTTG+TGG + tig0019653:58979-58998 Msa1375350:CDS 40.0%
!!! AGGGTTTTGAAGGTAATGCT+AGG + tig0019653:59016-59035 Msa1375350:CDS 40.0%
! GGTGCTAATTTTGTGAATCC+TGG + tig0019653:59057-59076 Msa1375350:CDS 40.0%
GTGAATCCTGGATACACTAA+AGG + tig0019653:59069-59088 Msa1375350:CDS 40.0%
!! TACACTAAAGGTGATGGACT+TGG + tig0019653:59081-59100 Msa1375350:CDS 40.0%
AGAGTCTCTAGCATTTCTCT+TGG - tig0019653:59163-59182 None:intergenic 40.0%
! GTGTGCTGAAAGTTTTCCTT+AGG + tig0019653:59243-59262 Msa1375350:intron 40.0%
AAGAACACAGCAAACCCAAT+GGG - tig0019653:59553-59572 None:intergenic 40.0%
TTAATGCCTGTTCCTGTGAT+TGG - tig0019653:59595-59614 None:intergenic 40.0%
AGCTGCCATCATCTTTAACA+GGG + tig0019653:59633-59652 Msa1375350:CDS 40.0%
TCTTTAACAGGGACTTTGCT+TGG + tig0019653:59644-59663 Msa1375350:CDS 40.0%
CTTTAACAGGGACTTTGCTT+GGG + tig0019653:59645-59664 Msa1375350:CDS 40.0%
! TTCTGGGTTGGACCATTTAT+TGG + tig0019653:59786-59805 Msa1375350:CDS 40.0%
TTGTCTTGAAAGGAATGGCT+CGG - tig0019653:59848-59867 None:intergenic 40.0%
AAACGTGATATCTGCACTCT+TGG - tig0019653:60076-60095 None:intergenic 40.0%
GAGAGTAAGAATGGAGAAGG+AGG + tig0019653:58467-58486 Msa1375350:exon 45.0%
AGCTCACCAGGTTCAAAGAA+TGG - tig0019653:58591-58610 None:intergenic 45.0%
GACACCCATGACAGTCAAAA+TGG - tig0019653:58682-58701 None:intergenic 45.0%
ACCTCCAAATGTTCCTCTGT+TGG + tig0019653:58711-58730 Msa1375350:CDS 45.0%
TGTTCCTCTGTTGGCATTCA+AGG + tig0019653:58720-58739 Msa1375350:CDS 45.0%
!! GGTATTGCTTGGTCTTTTGG+GGG + tig0019653:58741-58760 Msa1375350:CDS 45.0%
TACTGCACTGCTGGAATATC+AGG + tig0019653:58783-58802 Msa1375350:CDS 45.0%
ACAGACCAAATGTCACAGCA+GGG - tig0019653:58909-58928 None:intergenic 45.0%
AACAGACCAAATGTCACAGC+AGG - tig0019653:58910-58929 None:intergenic 45.0%
CCATCACCTTTAGTGTATCC+AGG - tig0019653:59078-59097 None:intergenic 45.0%
CCTGGATACACTAAAGGTGA+TGG + tig0019653:59075-59094 Msa1375350:CDS 45.0%
CAAGAACACAGCAAACCCAA+TGG - tig0019653:59554-59573 None:intergenic 45.0%
!! CATTGGGTTTGCTGTGTTCT+TGG + tig0019653:59552-59571 Msa1375350:CDS 45.0%
TGATTGGAATGGTAGCCAAG+TGG - tig0019653:59579-59598 None:intergenic 45.0%
TTGGCTACCATTCCAATCAC+AGG + tig0019653:59580-59599 Msa1375350:CDS 45.0%
ACCATTCCAATCACAGGAAC+AGG + tig0019653:59586-59605 Msa1375350:CDS 45.0%
ATTAACCCAGCTAGGAGTCT+TGG + tig0019653:59610-59629 Msa1375350:CDS 45.0%
GAGCTGCCATCATCTTTAAC+AGG + tig0019653:59632-59651 Msa1375350:CDS 45.0%
TTGCAGTGGATATTCTGGGT+TGG + tig0019653:59774-59793 Msa1375350:intron 45.0%
GCAAGAGCAGCTCCAATAAA+TGG - tig0019653:59801-59820 None:intergenic 45.0%
GAGCCATTCCTTTCAAGACA+AGG + tig0019653:59847-59866 Msa1375350:CDS 45.0%
GGTCCTTGTCTTGAAAGGAA+TGG - tig0019653:59853-59872 None:intergenic 45.0%
CAAACACAGATAAGAGCCTC+AGG - tig0019653:59874-59893 None:intergenic 45.0%
! CTGCGTGTGTTACTATGGAA+TGG - tig0019653:60140-60159 None:intergenic 45.0%
GAGAGTAAGAATGGAGAAGG+AGG + tig0019653:58467-58486 Msa1375350:exon 45.0%
AGCTCACCAGGTTCAAAGAA+TGG - tig0019653:58591-58610 None:intergenic 45.0%
GACACCCATGACAGTCAAAA+TGG - tig0019653:58682-58701 None:intergenic 45.0%
ACCTCCAAATGTTCCTCTGT+TGG + tig0019653:58711-58730 Msa1375350:CDS 45.0%
TGTTCCTCTGTTGGCATTCA+AGG + tig0019653:58720-58739 Msa1375350:CDS 45.0%
!! GGTATTGCTTGGTCTTTTGG+GGG + tig0019653:58741-58760 Msa1375350:CDS 45.0%
TACTGCACTGCTGGAATATC+AGG + tig0019653:58783-58802 Msa1375350:CDS 45.0%
ACAGACCAAATGTCACAGCA+GGG - tig0019653:58909-58928 None:intergenic 45.0%
AACAGACCAAATGTCACAGC+AGG - tig0019653:58910-58929 None:intergenic 45.0%
CCATCACCTTTAGTGTATCC+AGG - tig0019653:59078-59097 None:intergenic 45.0%
CCTGGATACACTAAAGGTGA+TGG + tig0019653:59075-59094 Msa1375350:CDS 45.0%
CAAGAACACAGCAAACCCAA+TGG - tig0019653:59554-59573 None:intergenic 45.0%
!! CATTGGGTTTGCTGTGTTCT+TGG + tig0019653:59552-59571 Msa1375350:CDS 45.0%
TGATTGGAATGGTAGCCAAG+TGG - tig0019653:59579-59598 None:intergenic 45.0%
TTGGCTACCATTCCAATCAC+AGG + tig0019653:59580-59599 Msa1375350:CDS 45.0%
ACCATTCCAATCACAGGAAC+AGG + tig0019653:59586-59605 Msa1375350:CDS 45.0%
ATTAACCCAGCTAGGAGTCT+TGG + tig0019653:59610-59629 Msa1375350:CDS 45.0%
GAGCTGCCATCATCTTTAAC+AGG + tig0019653:59632-59651 Msa1375350:CDS 45.0%
TTGCAGTGGATATTCTGGGT+TGG + tig0019653:59774-59793 Msa1375350:intron 45.0%
GCAAGAGCAGCTCCAATAAA+TGG - tig0019653:59801-59820 None:intergenic 45.0%
GAGCCATTCCTTTCAAGACA+AGG + tig0019653:59847-59866 Msa1375350:CDS 45.0%
GGTCCTTGTCTTGAAAGGAA+TGG - tig0019653:59853-59872 None:intergenic 45.0%
CAAACACAGATAAGAGCCTC+AGG - tig0019653:59874-59893 None:intergenic 45.0%
! CTGCGTGTGTTACTATGGAA+TGG - tig0019653:60140-60159 None:intergenic 45.0%
!! AAAAATTAAATAATATTGTA+AGG - tig0019653:58815-58834 None:intergenic 5.0%
!! AAAAATTAAATAATATTGTA+AGG - tig0019653:58815-58834 None:intergenic 5.0%
TTCTCAGAGAGGCAGCCATT+AGG + tig0019653:58516-58535 Msa1375350:CDS 50.0%
TCTCAGAGAGGCAGCCATTA+GGG + tig0019653:58517-58536 Msa1375350:CDS 50.0%
TCAAAGAATGGAGCTGGTGG+TGG - tig0019653:58579-58598 None:intergenic 50.0%
GGTTCAAAGAATGGAGCTGG+TGG - tig0019653:58582-58601 None:intergenic 50.0%
CCAGGTTCAAAGAATGGAGC+TGG - tig0019653:58585-58604 None:intergenic 50.0%
CCAGCTCCATTCTTTGAACC+TGG + tig0019653:58582-58601 Msa1375350:CDS 50.0%
AACCTGGTGAGCTCAAGTCA+TGG + tig0019653:58598-58617 Msa1375350:CDS 50.0%
GCCAACAGAGGAACATTTGG+AGG - tig0019653:58715-58734 None:intergenic 50.0%
TCCAGCAGTGCAGTAGACAA+GGG - tig0019653:58778-58797 None:intergenic 50.0%
TTCCAGCAGTGCAGTAGACA+AGG - tig0019653:58779-58798 None:intergenic 50.0%
!! CTTGGTGCTATTTGTGGTGC+TGG + tig0019653:58985-59004 Msa1375350:CDS 50.0%
!! TGCTATTTGTGGTGCTGGTG+TGG + tig0019653:58990-59009 Msa1375350:CDS 50.0%
!! GGTGTGGTGAAGGGTTTTGA+AGG + tig0019653:59006-59025 Msa1375350:CDS 50.0%
GGACTTGGAGCTGAGATTGT+TGG + tig0019653:59096-59115 Msa1375350:CDS 50.0%
ATCTTGGCTCCTCTTCCCAT+TGG + tig0019653:59535-59554 Msa1375350:CDS 50.0%
TCTTGGCTCCTCTTCCCATT+GGG + tig0019653:59536-59555 Msa1375350:CDS 50.0%
ACAGCAAACCCAATGGGAAG+AGG - tig0019653:59547-59566 None:intergenic 50.0%
TGCTGTGTTCTTGGTCCACT+TGG + tig0019653:59561-59580 Msa1375350:CDS 50.0%
GCCTGTTCCTGTGATTGGAA+TGG - tig0019653:59590-59609 None:intergenic 50.0%
GAACAGGCATTAACCCAGCT+AGG + tig0019653:59602-59621 Msa1375350:CDS 50.0%
! GAATGGCTCGGATGACAATC+TGG - tig0019653:59836-59855 None:intergenic 50.0%
CCTCAGGTCCTTGTCTTGAA+AGG - tig0019653:59858-59877 None:intergenic 50.0%
CCTTTCAAGACAAGGACCTG+AGG + tig0019653:59855-59874 Msa1375350:CDS 50.0%
TTCTCAGAGAGGCAGCCATT+AGG + tig0019653:58516-58535 Msa1375350:CDS 50.0%
TCTCAGAGAGGCAGCCATTA+GGG + tig0019653:58517-58536 Msa1375350:CDS 50.0%
TCAAAGAATGGAGCTGGTGG+TGG - tig0019653:58579-58598 None:intergenic 50.0%
GGTTCAAAGAATGGAGCTGG+TGG - tig0019653:58582-58601 None:intergenic 50.0%
CCAGGTTCAAAGAATGGAGC+TGG - tig0019653:58585-58604 None:intergenic 50.0%
CCAGCTCCATTCTTTGAACC+TGG + tig0019653:58582-58601 Msa1375350:CDS 50.0%
AACCTGGTGAGCTCAAGTCA+TGG + tig0019653:58598-58617 Msa1375350:CDS 50.0%
GCCAACAGAGGAACATTTGG+AGG - tig0019653:58715-58734 None:intergenic 50.0%
TCCAGCAGTGCAGTAGACAA+GGG - tig0019653:58778-58797 None:intergenic 50.0%
TTCCAGCAGTGCAGTAGACA+AGG - tig0019653:58779-58798 None:intergenic 50.0%
!! CTTGGTGCTATTTGTGGTGC+TGG + tig0019653:58985-59004 Msa1375350:CDS 50.0%
!! TGCTATTTGTGGTGCTGGTG+TGG + tig0019653:58990-59009 Msa1375350:CDS 50.0%
!! GGTGTGGTGAAGGGTTTTGA+AGG + tig0019653:59006-59025 Msa1375350:CDS 50.0%
GGACTTGGAGCTGAGATTGT+TGG + tig0019653:59096-59115 Msa1375350:CDS 50.0%
ATCTTGGCTCCTCTTCCCAT+TGG + tig0019653:59535-59554 Msa1375350:CDS 50.0%
TCTTGGCTCCTCTTCCCATT+GGG + tig0019653:59536-59555 Msa1375350:CDS 50.0%
ACAGCAAACCCAATGGGAAG+AGG - tig0019653:59547-59566 None:intergenic 50.0%
TGCTGTGTTCTTGGTCCACT+TGG + tig0019653:59561-59580 Msa1375350:CDS 50.0%
GCCTGTTCCTGTGATTGGAA+TGG - tig0019653:59590-59609 None:intergenic 50.0%
GAACAGGCATTAACCCAGCT+AGG + tig0019653:59602-59621 Msa1375350:CDS 50.0%
! GAATGGCTCGGATGACAATC+TGG - tig0019653:59836-59855 None:intergenic 50.0%
CCTCAGGTCCTTGTCTTGAA+AGG - tig0019653:59858-59877 None:intergenic 50.0%
CCTTTCAAGACAAGGACCTG+AGG + tig0019653:59855-59874 Msa1375350:CDS 50.0%
CTTTGGGCTGCTGTCCCTAA+TGG - tig0019653:58534-58553 None:intergenic 55.0%
GACCATGACTTGAGCTCACC+AGG - tig0019653:58603-58622 None:intergenic 55.0%
!! TTGTGGTGCTGGTGTGGTGA+AGG + tig0019653:58996-59015 Msa1375350:CDS 55.0%
!! TGTGGTGCTGGTGTGGTGAA+GGG + tig0019653:58997-59016 Msa1375350:CDS 55.0%
CAGCTCCAAGACTCCTAGCT+GGG - tig0019653:59618-59637 None:intergenic 55.0%
CTTTGGGCTGCTGTCCCTAA+TGG - tig0019653:58534-58553 None:intergenic 55.0%
GACCATGACTTGAGCTCACC+AGG - tig0019653:58603-58622 None:intergenic 55.0%
!! TTGTGGTGCTGGTGTGGTGA+AGG + tig0019653:58996-59015 Msa1375350:CDS 55.0%
!! TGTGGTGCTGGTGTGGTGAA+GGG + tig0019653:58997-59016 Msa1375350:CDS 55.0%
CAGCTCCAAGACTCCTAGCT+GGG - tig0019653:59618-59637 None:intergenic 55.0%
GCCCTTGTCTACTGCACTGC+TGG + tig0019653:58774-58793 Msa1375350:CDS 60.0%
GCAGCTCCAAGACTCCTAGC+TGG - tig0019653:59619-59638 None:intergenic 60.0%
GCCCTTGTCTACTGCACTGC+TGG + tig0019653:58774-58793 Msa1375350:CDS 60.0%
GCAGCTCCAAGACTCCTAGC+TGG - tig0019653:59619-59638 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0019653 gene 58405 60281 58405 ID=Msa1375350;Name=Msa1375350
tig0019653 mRNA 58405 60281 58405 ID=Msa1375350-mRNA-1;Parent=Msa1375350;Name=Msa1375350-mRNA-1;_AED=0.05;_eAED=0.05;_QI=72|1|1|1|1|1|4|406|287
tig0019653 exon 58405 58804 58405 ID=Msa1375350-mRNA-1:exon:4422;Parent=Msa1375350-mRNA-1
tig0019653 exon 58893 59191 58893 ID=Msa1375350-mRNA-1:exon:4423;Parent=Msa1375350-mRNA-1
tig0019653 exon 59535 59675 59535 ID=Msa1375350-mRNA-1:exon:4424;Parent=Msa1375350-mRNA-1
tig0019653 exon 59780 60281 59780 ID=Msa1375350-mRNA-1:exon:4425;Parent=Msa1375350-mRNA-1
tig0019653 five_prime_UTR 58405 58476 58405 ID=Msa1375350-mRNA-1:five_prime_utr;Parent=Msa1375350-mRNA-1
tig0019653 CDS 58477 58804 58477 ID=Msa1375350-mRNA-1:cds;Parent=Msa1375350-mRNA-1
tig0019653 CDS 58893 59191 58893 ID=Msa1375350-mRNA-1:cds;Parent=Msa1375350-mRNA-1
tig0019653 CDS 59535 59675 59535 ID=Msa1375350-mRNA-1:cds;Parent=Msa1375350-mRNA-1
tig0019653 CDS 59780 59875 59780 ID=Msa1375350-mRNA-1:cds;Parent=Msa1375350-mRNA-1
tig0019653 three_prime_UTR 59876 60281 59876 ID=Msa1375350-mRNA-1:three_prime_utr;Parent=Msa1375350-mRNA-1
Gene Sequence

>Msa1375350

ATGGAGAAGGAGGAAGATGTGAAAGTTGGAGCAAACAAATTCTCAGAGAGGCAGCCATTAGGGACAGCAGCCCAAAGTGACAGCAAAGACTACAAAGAGCCACCACCAGCTCCATTCTTTGAACCTGGTGAGCTCAAGTCATGGTCTTTTTACAGAGCTGGAATTGCTGAGTTCATAGCCACTTTCTTGTTCCTTTACATCACCATTTTGACTGTCATGGGTGTCAACAGATCAACCTCCAAATGTTCCTCTGTTGGCATTCAAGGTATTGCTTGGTCTTTTGGGGGTATGATATTTGCCCTTGTCTACTGCACTGCTGGAATATCAGGTGGACACATAAACCCTGCTGTGACATTTGGTCTGTTTTTGGCAAGGAAGCTGTCACTTACAAGAGCTATATTCTACATTGTGATGCAATGTCTTGGTGCTATTTGTGGTGCTGGTGTGGTGAAGGGTTTTGAAGGTAATGCTAGGTATGAACTGTTTAAAGGTGGTGCTAATTTTGTGAATCCTGGATACACTAAAGGTGATGGACTTGGAGCTGAGATTGTTGGTACTTTTGTTCTTGTTTACACTGTTTTCTCTGCTACTGATGCCAAGAGAAATGCTAGAGACTCTCATGTTCCTATCTTGGCTCCTCTTCCCATTGGGTTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCAATCACAGGAACAGGCATTAACCCAGCTAGGAGTCTTGGAGCTGCCATCATCTTTAACAGGGACTTTGCTTGGGATGACCATTGGATATTCTGGGTTGGACCATTTATTGGAGCTGCTCTTGCTGCTGTGTATCACCAGATTGTCATCCGAGCCATTCCTTTCAAGACAAGGACCTGA

Protein sequence

>Msa1375350

MEKEEDVKVGANKFSERQPLGTAAQSDSKDYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFLYITILTVMGVNRSTSKCSSVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFEGNARYELFKGGANFVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNRDFAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKTRT*