AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0634890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0634890 MtrunA17_Chr4g0014351 94.577 461 21 4 78 536 411 869 0.0 805
Msa0634890 MtrunA17_Chr4g0014351 76.378 127 29 1 78 204 304 429 5.18e-38 149
Msa0634890 MtrunA17_Chr4g0014351 73.636 110 21 2 95 204 221 322 6.44e-28 118
Msa0634890 MtrunA17_Chr5g0396231 58.824 119 48 1 417 535 382 499 2.24e-40 152
Msa0634890 MtrunA17_Chr8g0339171 41.573 89 52 0 448 536 50 138 5.22e-15 72.4
Msa0634890 MtrunA17_Chr1g0179681 35.484 124 66 5 421 535 125 243 1.51e-14 73.9
Msa0634890 MtrunA17_Chr8g0352971 41.176 85 48 1 451 533 20 104 2.67e-14 75.1
Msa0634890 MtrunA17_Chr7g0234801 36.047 86 55 0 448 533 52 137 2.29e-13 72.8
Msa0634890 MtrunA17_Chr4g0052911 37.302 126 64 5 420 533 115 237 6.38e-13 68.6
Msa0634890 MtrunA17_Chr8g0377771 37.209 86 54 0 448 533 56 141 1.73e-12 70.1
Msa0634890 MtrunA17_Chr8g0339141 36.782 87 55 0 447 533 57 143 2.29e-12 69.7
Msa0634890 MtrunA17_Chr5g0435521 34.884 86 55 1 451 535 35 120 4.98e-12 65.1
Msa0634890 MtrunA17_Chr7g0255551 35.632 87 54 2 448 533 39 124 3.45e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0634890 AT4G25340.1 56.667 120 52 0 417 536 358 477 1.42e-41 156
Msa0634890 AT3G12340.3 30.831 373 204 9 174 536 50 378 2.52e-31 125
Msa0634890 AT3G12340.2 30.831 373 204 9 174 536 50 378 2.52e-31 125
Msa0634890 AT3G12340.1 30.831 373 204 9 174 536 171 499 1.49e-30 125
Msa0634890 AT5G05420.1 50.000 108 53 1 428 535 36 142 1.99e-30 116
Msa0634890 AT4G25340.2 57.895 76 32 0 417 492 358 433 1.13e-22 101
Msa0634890 AT3G25220.1 42.697 89 51 0 448 536 52 140 1.02e-14 72.0
Msa0634890 AT5G48580.1 41.304 92 54 0 445 536 49 140 1.46e-14 72.0
Msa0634890 AT3G10060.1 35.484 124 66 5 421 535 98 216 3.17e-14 72.8
Msa0634890 AT5G48570.1 38.372 86 53 0 448 533 65 150 5.37e-14 75.1
Msa0634890 AT3G25230.1 37.931 87 54 0 448 534 57 143 7.43e-13 71.6
Msa0634890 AT3G25230.2 37.931 87 54 0 448 534 57 143 8.87e-13 71.2
Msa0634890 AT5G45680.1 40.594 101 47 4 445 533 106 205 2.49e-11 63.9

Find 198 sgRNAs with CRISPR-Local

Find 655 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGTCCTTGCAATTGAATT+TGG 0.202666 4_3:-22717569 Msa0634890:five_prime_UTR
AAACTCTACTCTCCGGGTTT+AGG 0.224182 4_3:-22719028 Msa0634890:five_prime_UTR
CCATTTCTGTTGTCACCTTC+AGG 0.226295 4_3:+22712389 None:intergenic
TCATAAACCAACCATGAATT+TGG 0.244200 4_3:+22709242 None:intergenic
GTTATTGAGGGTTGGGATAT+TGG 0.252092 4_3:-22709559 Msa0634890:CDS
ACTGGCAAGTTGAAGGAAAA+TGG 0.261284 4_3:-22709730 Msa0634890:CDS
AACTCTACTCTCCGGGTTTA+GGG 0.271814 4_3:-22719027 Msa0634890:five_prime_UTR
GACCATGAGAACAGTATTAT+TGG 0.280660 4_3:-22716204 Msa0634890:five_prime_UTR
CTTCCACTGTTCCGGATGTT+GGG 0.283057 4_3:-22715099 Msa0634890:CDS
CTTCCACTGTTCCGGATGTT+GGG 0.283057 4_3:-22715968 Msa0634890:five_prime_UTR
CTTGAGACAGGGAAAGAAAA+TGG 0.283603 4_3:-22709908 Msa0634890:CDS
TGGTCATGTTTGAGTGAATA+TGG 0.290346 4_3:-22709170 Msa0634890:three_prime_UTR
GGCAGTTCCTTCCACTGTTC+CGG 0.304338 4_3:-22715107 Msa0634890:CDS
GACAGTTCCTTCCACTGTTC+CGG 0.305801 4_3:-22715976 Msa0634890:five_prime_UTR
AATGTTATTCTTTCCGTCCT+TGG 0.324140 4_3:-22717529 Msa0634890:five_prime_UTR
ATATTTGAGCTTGCCTTCAT+TGG 0.326158 4_3:+22716591 None:intergenic
GGTCGATCCTTGCACTGTTC+CGG 0.327548 4_3:-22715563 Msa0634890:CDS
AGTAATCAGGACACAGTTAA+TGG 0.330450 4_3:-22713114 Msa0634890:CDS
TTTCTTAACTTTCTTATCTT+CGG 0.342081 4_3:+22710093 None:intergenic
AGCTTGCCTTCATTGGAAAT+AGG 0.344631 4_3:+22716598 None:intergenic
GAACACAGACGAGGATCTTC+TGG 0.344791 4_3:-22714966 Msa0634890:CDS
TAGTGCTACTGAAACAAAAT+TGG 0.347050 4_3:-22715760 Msa0634890:CDS
AGATTTCTCTGTTTCTGTAT+TGG 0.347847 4_3:+22716696 None:intergenic
CCTTCCACTGTTCCGGATGT+TGG 0.349134 4_3:-22715100 Msa0634890:CDS
CCTTCCACTGTTCCGGATGT+TGG 0.349134 4_3:-22715969 Msa0634890:five_prime_UTR
TTTGAATTTCAGGCCACTTT+GGG 0.356978 4_3:-22717682 Msa0634890:intron
TTTCCTGATCAAAGTGATCT+TGG 0.359443 4_3:+22715847 None:intergenic
ATGAACACTCACTTATCATT+AGG 0.360171 4_3:+22714917 None:intergenic
CATTTGACAATGTTCGAACT+TGG 0.360911 4_3:+22709948 None:intergenic
AATTGCTGCAGTAGGGAAAA+AGG 0.366272 4_3:-22709882 Msa0634890:intron
AGGAGAAGTTATTGAGGGTT+GGG 0.373313 4_3:-22709566 Msa0634890:CDS
TGAAATGTGGAGGCGACCTT+TGG 0.378340 4_3:+22718800 None:intergenic
TAAATCCTTTGTAAGGGTCT+TGG 0.380961 4_3:-22716289 Msa0634890:five_prime_UTR
CTTTGAATTTCAGGCCACTT+TGG 0.383074 4_3:-22717683 Msa0634890:intron
AGAAGAATAAATCCTTTGTA+AGG 0.383149 4_3:-22716296 Msa0634890:five_prime_UTR
GAAGAAGAAAAGTAAAAGTC+AGG 0.385488 4_3:-22710068 Msa0634890:CDS
CTTTGTAAGGGTCTTGGATC+AGG 0.392305 4_3:-22716283 Msa0634890:five_prime_UTR
TAAAGAGAGCACAGATAAAC+AGG 0.395132 4_3:+22717604 None:intergenic
TAAATCACATACGTCATTGA+TGG 0.404187 4_3:+22709391 None:intergenic
AAAACATACCACCAAATTCA+TGG 0.412855 4_3:-22709253 Msa0634890:CDS
TTCTTTCCGTCCTTGGCCCT+CGG 0.414122 4_3:-22717522 Msa0634890:five_prime_UTR
TATCTTTCCCGTGGCCGCTA+TGG 0.415207 4_3:-22717478 Msa0634890:five_prime_UTR
GGACTCTGCTGTCTCTTTGT+CGG 0.416295 4_3:+22712340 None:intergenic
CCTTGCACTGTTCCGGATGT+TGG 0.419726 4_3:-22715556 Msa0634890:CDS
TTTCCTGATCCAAGAGATCC+TGG 0.427168 4_3:+22715413 None:intergenic
CTGGCAAGTTGAAGGAAAAT+GGG 0.428303 4_3:-22709729 Msa0634890:CDS
GTTATTCAAGAGCTTGAGAC+AGG 0.428795 4_3:-22709920 Msa0634890:CDS
TATCTGTGCTCTCTTTATCC+AGG 0.431922 4_3:-22717598 Msa0634890:five_prime_UTR
TTCTTGCAAAGAGAAGAAAT+TGG 0.432751 4_3:+22716315 None:intergenic
AAGGAGAAGTTATTGAGGGT+TGG 0.439237 4_3:-22709567 Msa0634890:CDS
TGTGTTCATTTCCCTGAGGC+AGG 0.441265 4_3:+22713136 None:intergenic
TATGGGAAATATATGGAGTC+AGG 0.441536 4_3:-22709152 Msa0634890:three_prime_UTR
CAATGTTGTTAACCTGCCTC+AGG 0.441931 4_3:-22713148 Msa0634890:CDS
GAACATGGCCCAGGATCTCT+TGG 0.449898 4_3:-22715422 Msa0634890:CDS
TGTTATCATACAATTGAATC+CGG 0.451568 4_3:+22709116 None:intergenic
TGGCCGCTATGGCAATACTA+TGG 0.452319 4_3:-22717467 Msa0634890:five_prime_UTR
GGGAAATGAACACAGTAATC+AGG 0.452685 4_3:-22713127 Msa0634890:CDS
GGTTGGGATATTGGTCTTGA+AGG 0.456064 4_3:-22709550 Msa0634890:intron
TTCCTGATCAAAGTGATCTT+GGG 0.456386 4_3:+22715848 None:intergenic
ACTTATCATTAGGTTGCTGC+TGG 0.460977 4_3:+22714927 None:intergenic
GGATCTCTTGGATCAGGAAA+TGG 0.461360 4_3:-22715410 Msa0634890:CDS
GGAACTGCCAACTGGTTTGA+AGG 0.462147 4_3:+22715121 None:intergenic
TTGTGCAGCATTATCTAGTT+CGG 0.464224 4_3:+22715459 None:intergenic
GAGTGAATATGGGAAATATA+TGG 0.464720 4_3:-22709159 Msa0634890:three_prime_UTR
TCTTCGGATTGATTTCCATC+AGG 0.465182 4_3:+22710109 None:intergenic
TCACTGAGAGTCAGATTCAT+AGG 0.468116 4_3:-22716155 Msa0634890:intron
CAGTGTGCATGTACAATCTC+AGG 0.468383 4_3:-22716361 Msa0634890:five_prime_UTR
GGCCCAGGATCTCTTGGATC+AGG 0.470381 4_3:-22715416 Msa0634890:CDS
CCTGAAGGTGACAACAGAAA+TGG 0.473113 4_3:-22712389 Msa0634890:CDS
AAGGGTCTTGGATCAGGAAA+TGG 0.474786 4_3:-22716277 Msa0634890:five_prime_UTR
CAACTCTTCCTCTGAAACAA+TGG 0.475717 4_3:-22718976 Msa0634890:five_prime_UTR
ATGTTCATTACCAGAGCTCT+TGG 0.476138 4_3:+22715030 None:intergenic
ATCTGAAAGAAACAAAACTT+TGG 0.476877 4_3:+22709009 None:intergenic
GTAATCAGGACACAGTTAAT+GGG 0.477374 4_3:-22713113 Msa0634890:intron
GATGATGATAGCGGTCTTGA+AGG 0.478274 4_3:-22716402 Msa0634890:five_prime_UTR
GACAAAGAAGCAATTGATGC+TGG 0.478437 4_3:-22716243 Msa0634890:five_prime_UTR
TTTCAGTAGCACTATTCTCA+TGG 0.478874 4_3:+22715769 None:intergenic
TGCAAGGACTCAGTTTGTCC+TGG 0.479083 4_3:+22717580 None:intergenic
CAAGTTCGAACATTGTCAAA+TGG 0.482884 4_3:-22709947 Msa0634890:CDS
TTCCAATAATACTGTTCTCA+TGG 0.483611 4_3:+22716202 None:intergenic
ATCAAATTCAACATTATATG+TGG 0.484953 4_3:+22708840 None:intergenic
GTACTTTGCTCAACCGATAC+AGG 0.491823 4_3:+22710019 None:intergenic
GTCAGGAGGCAATCAAAATC+CGG 0.492910 4_3:-22709135 Msa0634890:three_prime_UTR
GTTGGTTTATGACTTTGAAC+TGG 0.494478 4_3:-22709231 Msa0634890:CDS
CAATTACACTGGCAAGTTGA+AGG 0.496463 4_3:-22709737 Msa0634890:CDS
AGCTGAACCTTCTGATCACT+TGG 0.500805 4_3:-22715584 Msa0634890:CDS
TTCACAGGTTGGTCAAGGAC+AGG 0.509597 4_3:-22713244 Msa0634890:CDS
CATACCACCAAATTCATGGT+TGG 0.511268 4_3:-22709249 Msa0634890:CDS
GACAATGTTCGAACTTGGGA+AGG 0.511892 4_3:+22709953 None:intergenic
TAAAATACTACCTTCTTCAC+AGG 0.511997 4_3:-22713259 Msa0634890:CDS
CAGTGGAAGGAACTGCCAAC+TGG 0.512920 4_3:+22715113 None:intergenic
TTCCACTGTTCCGGATGTTG+GGG 0.516382 4_3:-22715098 Msa0634890:CDS
TTCCACTGTTCCGGATGTTG+GGG 0.516382 4_3:-22715967 Msa0634890:five_prime_UTR
AGGTAAAGGAGAAGTTATTG+AGG 0.516723 4_3:-22709572 Msa0634890:CDS
GAATCATAAGTGTGAGTGAA+AGG 0.517316 4_3:+22718825 None:intergenic
GGTAAAGGAGAAGTTATTGA+GGG 0.518782 4_3:-22709571 Msa0634890:CDS
GCCAAACAAACTCTACTCTC+CGG 0.519414 4_3:-22719035 None:intergenic
GTCCCAAGATCACTTTGATC+AGG 0.520558 4_3:-22715850 Msa0634890:five_prime_UTR
TTTCAGGCCACTTTGGGACA+TGG 0.520724 4_3:-22717676 Msa0634890:intron
GCTCCTTTCAAATTTCGCCT+TGG 0.521588 4_3:-22709679 Msa0634890:intron
GCAATTGAATTTGGAGCTTG+AGG 0.523659 4_3:-22717560 Msa0634890:five_prime_UTR
TTGAGACAGGGAAAGAAAAT+GGG 0.525124 4_3:-22709907 Msa0634890:CDS
AATGGGAAAATTGCTGCAGT+AGG 0.525430 4_3:-22709890 Msa0634890:CDS
TAGTATTGCCATAGCGGCCA+CGG 0.525730 4_3:+22717470 None:intergenic
TGATTCTCAGGCATGCGAGT+TGG 0.529832 4_3:-22709439 Msa0634890:intron
CCTTGACCAACCTGTGAAGA+AGG 0.529915 4_3:+22713249 None:intergenic
TCCATCCAACTGATTGTGGC+TGG 0.529976 4_3:-22709190 Msa0634890:three_prime_UTR
CTTTCACCAACGACTCGACA+TGG 0.530014 4_3:+22708967 None:intergenic
ACTGAGATGATGGAAGAGGA+TGG 0.530349 4_3:-22709998 Msa0634890:CDS
AATTTGGAGCTTGAGGAAGA+TGG 0.534366 4_3:-22717553 Msa0634890:five_prime_UTR
TGAGCAAAGTACTGAGATGA+TGG 0.540063 4_3:-22710008 Msa0634890:CDS
CACACTTATGATTCTTCCAA+AGG 0.540990 4_3:-22718816 Msa0634890:five_prime_UTR
GAAGTACCACTTGGTAGAGT+CGG 0.543598 4_3:-22716424 Msa0634890:five_prime_UTR
CCAAACAAACTCTACTCTCC+GGG 0.544183 4_3:-22719034 None:intergenic
TCGCAGATATTCAAACTCAT+AGG 0.545219 4_3:-22715288 Msa0634890:intron
ATTTGACAATGTTCGAACTT+GGG 0.546455 4_3:+22709949 None:intergenic
GACAGAGAAACAGTTGATGC+TGG 0.549982 4_3:-22715810 Msa0634890:CDS
GCATCTCCTATTTCCAATGA+AGG 0.550943 4_3:-22716604 Msa0634890:intron
ACAATGGAAAGGGAATCATA+TGG 0.551522 4_3:-22716730 Msa0634890:intron
TGAGAATCTGTCTCAGAGGA+AGG 0.554915 4_3:+22712461 None:intergenic
AGCACTCTGCAATGTAATGT+GGG 0.555619 4_3:-22717637 Msa0634890:five_prime_UTR
AGGTCGCCTCCACATTTCAA+TGG 0.556393 4_3:-22718796 Msa0634890:intron
TTACTCCATCCAACTGATTG+TGG 0.558119 4_3:-22709194 Msa0634890:three_prime_UTR
AAGTACTGAGATGATGGAAG+AGG 0.558158 4_3:-22710002 Msa0634890:CDS
TTACCAAGGCGAAATTTGAA+AGG 0.559040 4_3:+22709676 None:intergenic
GATGAATACTCCGAGGGCCA+AGG 0.559789 4_3:+22717512 None:intergenic
GCAGGTGTTGAAATCAAACC+TGG 0.561306 4_3:-22718852 Msa0634890:intron
ATACTACCTTCTTCACAGGT+TGG 0.562544 4_3:-22713255 Msa0634890:CDS
AGGCAGGAAAGCTGAAACCA+CGG 0.563166 4_3:-22713283 Msa0634890:intron
ACCAGCCACAATCAGTTGGA+TGG 0.563509 4_3:+22709189 None:intergenic
CCTTCTTCACAGGTTGGTCA+AGG 0.564207 4_3:-22713249 Msa0634890:CDS
AGCTGAACCTTCAAACCAGT+TGG 0.564446 4_3:-22715128 Msa0634890:CDS
GTGCGAAAGGCAGCAGAAGA+CGG 0.564863 4_3:-22716455 Msa0634890:five_prime_UTR
TTGCAGATAGTCAGACTCAC+AGG 0.565785 4_3:-22715722 Msa0634890:intron
TGCATGTTTCAGGTCTAAGA+AGG 0.568255 4_3:-22709288 Msa0634890:intron
TGCAGCATTATCTAGTTCAG+TGG 0.568551 4_3:+22715896 None:intergenic
AAGGCAGCAGAAGACGGCTG+AGG 0.570683 4_3:-22716449 Msa0634890:five_prime_UTR
AAGCACTCTGCAATGTAATG+TGG 0.570727 4_3:-22717638 Msa0634890:five_prime_UTR
AAGCTCCAAATTCAATTGCA+AGG 0.573154 4_3:+22717564 None:intergenic
AAACTCTGATGTGCCTGTAT+CGG 0.574913 4_3:-22710032 Msa0634890:CDS
CTGATCCAAGACCCTTACAA+AGG 0.575653 4_3:+22716284 None:intergenic
ATGGGAAAATTGCTGCAGTA+GGG 0.578049 4_3:-22709889 Msa0634890:CDS
AAGAAGAAAAGTAAAAGTCA+GGG 0.578925 4_3:-22710067 Msa0634890:CDS
CAACATTATATGTGGAGACA+TGG 0.580224 4_3:+22708848 None:intergenic
CGCAGCATTATCTAGATCGG+TGG 0.581023 4_3:+22715006 None:intergenic
GGTCATGTTTGAGTGAATAT+GGG 0.581265 4_3:-22709169 Msa0634890:three_prime_UTR
GGAACTGTCAACTGATCTGA+AGG 0.581399 4_3:+22715990 None:intergenic
CGAAAACCATGTCGAGTCGT+TGG 0.581601 4_3:-22708973 Msa0634890:three_prime_UTR
CATGACCAGCCACAATCAGT+TGG 0.583859 4_3:+22709185 None:intergenic
GGATCGACCAAGTGATCAGA+AGG 0.590673 4_3:+22715577 None:intergenic
GGAAGAGGATGGAAATAATG+TGG 0.590711 4_3:-22709987 Msa0634890:CDS
GACAAAGAAGCAGTTGATGA+TGG 0.591027 4_3:-22715376 Msa0634890:CDS
GAAGAATAAATCCTTTGTAA+GGG 0.591352 4_3:-22716295 Msa0634890:five_prime_UTR
CCAACATCCGGAACAGTGCA+AGG 0.592707 4_3:+22715556 None:intergenic
TAAACCAACCATGAATTTGG+TGG 0.597643 4_3:+22709245 None:intergenic
CCAACATCCGGAACAGTGGA+AGG 0.599169 4_3:+22715100 None:intergenic
CCAACATCCGGAACAGTGGA+AGG 0.599169 4_3:+22715969 None:intergenic
AGCATTATCTAGTTCAGTGG+AGG 0.600926 4_3:+22715899 None:intergenic
TGCGGTTATTATCTTTCCCG+TGG 0.601909 4_3:-22717487 Msa0634890:five_prime_UTR
TTGCGCAGCATTATCTAGAT+CGG 0.602410 4_3:+22715003 None:intergenic
AATGTTGTTAACCTGCCTCA+GGG 0.602636 4_3:-22713147 Msa0634890:CDS
GCAGAGGAAGCATCTTCTGA+TGG 0.602658 4_3:-22716489 Msa0634890:intron
TGCAGTGCCATGTCCCAAAG+TGG 0.602865 4_3:+22717669 None:intergenic
GGTGCTCAAGACAATCCTGA+TGG 0.604417 4_3:-22710124 Msa0634890:CDS
GTGGTGATTGAATCAAATGC+TGG 0.607008 4_3:-22709706 Msa0634890:CDS
AACAAAGCTTCACATCCTGA+AGG 0.609738 4_3:-22712404 Msa0634890:CDS
ATCACATACGTCATTGATGG+TGG 0.611631 4_3:+22709394 None:intergenic
AGTATTGCCATAGCGGCCAC+GGG 0.614575 4_3:+22717471 None:intergenic
ATCCCCAACATCCGGAACAG+TGG 0.617458 4_3:+22715096 None:intergenic
CAGATCAGCATCAATTACAC+TGG 0.623336 4_3:-22709748 Msa0634890:CDS
AAACTTATCACTCAGACCAT+CGG 0.623766 4_3:+22712319 None:intergenic
ACAGACGAGGATCTTCTGGC+AGG 0.625586 4_3:-22714962 Msa0634890:CDS
TTCCTGATCCAAGAGATCCT+GGG 0.625814 4_3:+22715414 None:intergenic
GAAAGATTACCATTGAAATG+TGG 0.627543 4_3:+22718787 None:intergenic
CGCAGAGATGAATACTCCGA+GGG 0.629223 4_3:+22717506 None:intergenic
CATCCATAGTATTGCCATAG+CGG 0.629804 4_3:+22717464 None:intergenic
ATTCTCAAAAGAAAACAAAG+AGG 0.632744 4_3:-22712445 Msa0634890:CDS
AGATTACCATTGAAATGTGG+AGG 0.633007 4_3:+22718790 None:intergenic
GGTGACAACAGAAATGGAGA+AGG 0.633425 4_3:-22712383 Msa0634890:CDS
AATACTCCGAGGGCCAAGGA+CGG 0.634343 4_3:+22717516 None:intergenic
ATCCCCAACATCCGGAACAG+TGG 0.646276 4_3:+22715965 None:intergenic
GGGAAATATATGGAGTCAGG+AGG 0.650332 4_3:-22709149 Msa0634890:three_prime_UTR
TGGTGCAGCAGTGTGGACAA+TGG 0.653645 4_3:-22710145 Msa0634890:intron
AAAGAGACAGCAGAGTCCGA+TGG 0.654236 4_3:-22712335 Msa0634890:CDS
GAGGAAGCATCTTCTGATGG+CGG 0.656231 4_3:-22716486 Msa0634890:five_prime_UTR
AGAGGATGGAAATAATGTGG+AGG 0.656655 4_3:-22709984 Msa0634890:CDS
CGAGTCGTTGGTGAAAGTCA+TGG 0.657325 4_3:-22708961 Msa0634890:three_prime_UTR
TGTTTCAGGTCTAAGAAGGA+CGG 0.657592 4_3:-22709284 Msa0634890:intron
TTATTCAAGAGCTTGAGACA+GGG 0.658642 4_3:-22709919 Msa0634890:CDS
TGGCAAGTTGAAGGAAAATG+GGG 0.678248 4_3:-22709728 Msa0634890:CDS
GTAGAGTCGGATGATGATAG+CGG 0.678545 4_3:-22716411 Msa0634890:five_prime_UTR
GCTGAGGAAGAAGTACCACT+TGG 0.681517 4_3:-22716433 Msa0634890:five_prime_UTR
TTACTGTGTTCATTTCCCTG+AGG 0.689976 4_3:+22713132 None:intergenic
CAAGTTGAAGGAAAATGGGG+TGG 0.698347 4_3:-22709725 Msa0634890:CDS
GTCGTTGGTGAAAGTCATGG+TGG 0.698948 4_3:-22708958 Msa0634890:three_prime_UTR
CATCATCCGACTCTACCAAG+TGG 0.700404 4_3:+22716418 None:intergenic
CCGCAGAGATGAATACTCCG+AGG 0.717928 4_3:+22717505 None:intergenic
CCTCGGAGTATTCATCTCTG+CGG 0.742424 4_3:-22717505 Msa0634890:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAACCAAAAAAAAAAA+AGG + chr4_3:22710478-22710497 None:intergenic 10.0%
!!! TTTTTTTTTTTTGGTTATTA+TGG - chr4_3:22710477-22710496 Msa0634890:intron 10.0%
!!! AAAAATTATTTTCATTTTTC+TGG - chr4_3:22710934-22710953 Msa0634890:intron 10.0%
!!! CTTTCTTTTATATTTTAAAA+AGG - chr4_3:22713595-22713614 Msa0634890:intron 10.0%
!!! TTCTTTTATATTTTAAAAAG+GGG - chr4_3:22713597-22713616 Msa0634890:intron 10.0%
!! TTAAAAAAAATCAAAAGTAA+AGG + chr4_3:22714271-22714290 None:intergenic 10.0%
!! ATAAATTATTTACAGAATAT+AGG - chr4_3:22714970-22714989 Msa0634890:CDS 10.0%
!! AACTAAATAAATTTATTGTA+AGG + chr4_3:22715206-22715225 None:intergenic 10.0%
!! CAAGTTAATTTATTAAAAAT+AGG - chr4_3:22715814-22715833 Msa0634890:CDS 10.0%
!! TAATTTATTAAAAATAGGAT+AGG - chr4_3:22715819-22715838 Msa0634890:CDS 10.0%
!! CTCAAAAAAAAAAAAAAAAA+AGG - chr4_3:22716991-22717010 Msa0634890:intron 10.0%
!!! TTACTTTTAAAAATAATGTA+TGG - chr4_3:22718987-22719006 Msa0634890:five_prime_UTR 10.0%
!!! CTTTTAGAAAAAATAGATTT+TGG - chr4_3:22709445-22709464 Msa0634890:intron 15.0%
!!! TAATAGAAGTGATTTTTTTT+TGG - chr4_3:22709570-22709589 Msa0634890:CDS 15.0%
!!! AATAGAAGTGATTTTTTTTT+GGG - chr4_3:22709571-22709590 Msa0634890:CDS 15.0%
!!! TTGATTTTGTAAAATTGATT+AGG - chr4_3:22709651-22709670 Msa0634890:intron 15.0%
!! TAAAGTTTGTCAAAAATATA+AGG + chr4_3:22710442-22710461 None:intergenic 15.0%
!!! GTTATTATGGTTTATTTTAT+TGG - chr4_3:22710490-22710509 Msa0634890:intron 15.0%
!!! TTTTTCAATTATTTTCACTT+AGG - chr4_3:22710778-22710797 Msa0634890:intron 15.0%
!! TTTATAAAGAAGTTAACTTA+AGG - chr4_3:22710845-22710864 Msa0634890:intron 15.0%
!!! AAAATTTACTATCTCTAAAA+GGG + chr4_3:22711806-22711825 None:intergenic 15.0%
!! AAAAATTTACTATCTCTAAA+AGG + chr4_3:22711807-22711826 None:intergenic 15.0%
!! CAAACATAATTTATAAACAA+AGG + chr4_3:22712254-22712273 None:intergenic 15.0%
!! AAACATAATTTATGAACAAA+GGG + chr4_3:22712709-22712728 None:intergenic 15.0%
!! GATAAAATGTTAGATTAATT+TGG - chr4_3:22713040-22713059 Msa0634890:intron 15.0%
!!! TTAGATTAATTTGGAAAATT+CGG - chr4_3:22713049-22713068 Msa0634890:intron 15.0%
!! TTTGTATAAATACAATAGTT+TGG + chr4_3:22713075-22713094 None:intergenic 15.0%
!!! AACTTTGAAATAATGAATTT+AGG - chr4_3:22713103-22713122 Msa0634890:intron 15.0%
!!! ACTTTGAAATAATGAATTTA+GGG - chr4_3:22713104-22713123 Msa0634890:intron 15.0%
!! ACTTATGATATTATTTGTAA+AGG + chr4_3:22714196-22714215 None:intergenic 15.0%
!! TTCTGTAAATAATTTATATG+AGG + chr4_3:22714967-22714986 None:intergenic 15.0%
!! AAGAAATTTATAAAATCCAA+AGG + chr4_3:22716351-22716370 None:intergenic 15.0%
!!! TTGGATTTTATAAATTTCTT+TGG - chr4_3:22716351-22716370 Msa0634890:five_prime_UTR 15.0%
!!! TTATAAATTTCTTTGGTAAT+AGG - chr4_3:22716358-22716377 Msa0634890:five_prime_UTR 15.0%
!!! TTTTATAAACTTTTAAACGA+AGG + chr4_3:22716441-22716460 None:intergenic 15.0%
!! TACAAATAACTAGTTATTTA+AGG - chr4_3:22716950-22716969 Msa0634890:intron 15.0%
!!! TTTTTTTTTTGAGCAAATAT+TGG + chr4_3:22716984-22717003 None:intergenic 15.0%
!! AATTGTAAACTTTGAATTTC+AGG - chr4_3:22710180-22710199 Msa0634890:intron 20.0%
!!! TTTTAACTTAGACAAGTATT+TGG - chr4_3:22710624-22710643 Msa0634890:intron 20.0%
!! CAAACATAATTTAAGAACAA+AGG + chr4_3:22711841-22711860 None:intergenic 20.0%
!! AAAGTCAAAAAAGAAAAAGA+AGG - chr4_3:22711935-22711954 Msa0634890:intron 20.0%
!! AAGTCAAAAAAGAAAAAGAA+GGG - chr4_3:22711936-22711955 Msa0634890:intron 20.0%
!! AAAGTCAAAAAAGAAAAAGA+AGG - chr4_3:22711935-22711954 Msa0634890:intron 20.0%
!! AAGTCAAAAAAGAAAAAGAA+GGG - chr4_3:22711936-22711955 Msa0634890:intron 20.0%
!!! AATATTCAGTATCTCTAAAA+GGG + chr4_3:22712675-22712694 None:intergenic 20.0%
!! AAATATTCAGTATCTCTAAA+AGG + chr4_3:22712676-22712695 None:intergenic 20.0%
!! CAAACATAATTTATGAACAA+AGG + chr4_3:22712710-22712729 None:intergenic 20.0%
!! AAAGTCAAAAAAGAAAAAGA+AGG - chr4_3:22711935-22711954 Msa0634890:intron 20.0%
!! AAGTCAAAAAAGAAAAAGAA+GGG - chr4_3:22711936-22711955 Msa0634890:intron 20.0%
!! TTCATTATTTCAAAGTTTCA+AGG + chr4_3:22713100-22713119 None:intergenic 20.0%
!!! GAATTAGTTTGAAAAAAAAG+AGG + chr4_3:22713221-22713240 None:intergenic 20.0%
!! AAATGTTCAAAACTTAATTC+CGG - chr4_3:22713282-22713301 Msa0634890:intron 20.0%
!!! CTATTGATTTATCTATGATA+TGG + chr4_3:22713938-22713957 None:intergenic 20.0%
!! CATATCATAGATAAATCAAT+AGG - chr4_3:22713936-22713955 Msa0634890:intron 20.0%
!! TATTATTTGTAAAGGAGTAA+AGG + chr4_3:22714188-22714207 None:intergenic 20.0%
!! ATGAAAAACCAAAGAAAAAA+AGG - chr4_3:22714651-22714670 Msa0634890:intron 20.0%
!! CTACTTCTATTTATATAATC+AGG - chr4_3:22714796-22714815 Msa0634890:intron 20.0%
!! GTAAATAATTTATATGAGGA+AGG + chr4_3:22714963-22714982 None:intergenic 20.0%
!!! TGTTTTAAATAATTACCTTC+TGG - chr4_3:22715020-22715039 Msa0634890:CDS 20.0%
!! TTTAATAGAATCAATGTTTG+AGG - chr4_3:22716707-22716726 Msa0634890:five_prime_UTR 20.0%
!! AAATAAGTTGTAGTATGTTA+GGG + chr4_3:22717681-22717700 None:intergenic 20.0%
!! AAAATAAGTTGTAGTATGTT+AGG + chr4_3:22717682-22717701 None:intergenic 20.0%
!! ATAATCTTGGATATTATTTC+TGG - chr4_3:22717707-22717726 Msa0634890:intron 20.0%
!! TTTCTTAACTTTCTTATCTT+CGG + chr4_3:22717782-22717801 None:intergenic 20.0%
!! TAATAAAATGTTCTGGTAAA+TGG + chr4_3:22718229-22718248 None:intergenic 20.0%
!!! ATTTTTCTTTTAGCACAAAA+AGG + chr4_3:22718968-22718987 None:intergenic 20.0%
!! TTAACGTTTAGGTTTATGAT+CGG + chr4_3:22708962-22708981 None:intergenic 25.0%
!!! CCAATTTTGATATGCATTTA+GGG - chr4_3:22709238-22709257 Msa0634890:CDS 25.0%
!! TTTTGACAAAAACTACACTT+TGG + chr4_3:22709973-22709992 None:intergenic 25.0%
!! ATGTTTGGAATACGAAATAA+TGG - chr4_3:22710051-22710070 Msa0634890:CDS 25.0%
! TTTACACATTGAAATCATTC+AGG - chr4_3:22710528-22710547 Msa0634890:intron 25.0%
! ATTGAAATCATTCAGGAAAA+TGG - chr4_3:22710535-22710554 Msa0634890:intron 25.0%
!!! AAGTATTTGATTTTGAGCTT+AGG - chr4_3:22710802-22710821 Msa0634890:intron 25.0%
! GTTTCAGAAAATATAGAGAT+TGG - chr4_3:22710869-22710888 Msa0634890:intron 25.0%
!!! GATAGTTTTATTAACGATGA+CGG - chr4_3:22711226-22711245 Msa0634890:intron 25.0%
! AGAAGAATAAATCCTTTGTA+AGG - chr4_3:22711576-22711595 Msa0634890:intron 25.0%
! GAAGAATAAATCCTTTGTAA+GGG - chr4_3:22711577-22711596 Msa0634890:intron 25.0%
! AAAAAAGAAAAAGAAGGGAA+AGG - chr4_3:22711941-22711960 Msa0634890:intron 25.0%
! AAAATTTACAATCTCCAAGA+GGG + chr4_3:22712221-22712240 None:intergenic 25.0%
! AAAAATTTACAATCTCCAAG+AGG + chr4_3:22712222-22712241 None:intergenic 25.0%
!! TTTTTAATATCTCCAACATC+CGG + chr4_3:22712331-22712350 None:intergenic 25.0%
! AAAAAAGAAAAAGAAGGGAA+AGG - chr4_3:22711941-22711960 Msa0634890:intron 25.0%
! AAAAAAGAAAAAGAAGGGAA+AGG - chr4_3:22711941-22711960 Msa0634890:intron 25.0%
!! TTTGAAAAAAAAGAGGTATG+AGG + chr4_3:22713214-22713233 None:intergenic 25.0%
!! ACATTGTTGGAATGAATTTT+CGG + chr4_3:22713356-22713375 None:intergenic 25.0%
! TGACATAGATTCATATAAGT+CGG + chr4_3:22713452-22713471 None:intergenic 25.0%
!!! TCCACAAGCATTTTTAAAAT+GGG + chr4_3:22713894-22713913 None:intergenic 25.0%
!!! ATCCACAAGCATTTTTAAAA+TGG + chr4_3:22713895-22713914 None:intergenic 25.0%
!! ATATATGCATGAGAAGTTTT+AGG + chr4_3:22714366-22714385 None:intergenic 25.0%
! TCTTTACAAGTAACAACAAA+AGG + chr4_3:22714530-22714549 None:intergenic 25.0%
!! TTGTTACTTGTAAAGATTTC+TGG - chr4_3:22714534-22714553 Msa0634890:intron 25.0%
! AAAACCAAAGAAAAAAAGGA+AGG - chr4_3:22714655-22714674 Msa0634890:intron 25.0%
! ATCAAATACCATATGTTGTA+GGG + chr4_3:22714844-22714863 None:intergenic 25.0%
! TATCAAATACCATATGTTGT+AGG + chr4_3:22714845-22714864 None:intergenic 25.0%
! ACAACATATGGTATTTGATA+TGG - chr4_3:22714845-22714864 Msa0634890:intron 25.0%
!!! CTTTTTTCAACTACTACAAA+AGG - chr4_3:22715104-22715123 Msa0634890:CDS 25.0%
! TAAATTTATTGTAAGGAGAG+TGG + chr4_3:22715199-22715218 None:intergenic 25.0%
! AATTCAAATCACAGTGAAAA+TGG + chr4_3:22715287-22715306 None:intergenic 25.0%
!!! TTTTGTTATCTGATAACCTA+TGG - chr4_3:22715346-22715365 Msa0634890:CDS 25.0%
!! TTTGTTATCTGATAACCTAT+GGG - chr4_3:22715347-22715366 Msa0634890:CDS 25.0%
! ATTCTCAAAAGAAAACAAAG+AGG - chr4_3:22715427-22715446 Msa0634890:CDS 25.0%
!!! TACTTTTCAATTGTTAGCTT+CGG + chr4_3:22715600-22715619 None:intergenic 25.0%
!! TGTCCTAATCTTTTCTTAAT+TGG - chr4_3:22715735-22715754 Msa0634890:CDS 25.0%
! AGACCAATTAAGAAAAGATT+AGG + chr4_3:22715741-22715760 None:intergenic 25.0%
! ATAAATTTCTATTGAGGACT+AGG + chr4_3:22715978-22715997 None:intergenic 25.0%
! TCCTCAATAGAAATTTATGT+TGG - chr4_3:22715980-22715999 Msa0634890:five_prime_UTR 25.0%
! CCTCAATAGAAATTTATGTT+GGG - chr4_3:22715981-22716000 Msa0634890:five_prime_UTR 25.0%
! TTATGTTGGGAAAATTAAAG+AGG - chr4_3:22715994-22716013 Msa0634890:five_prime_UTR 25.0%
! TATGTTGGGAAAATTAAAGA+GGG - chr4_3:22715995-22716014 Msa0634890:five_prime_UTR 25.0%
! AAAATTAAAGAGGGAAGAAA+GGG - chr4_3:22716004-22716023 Msa0634890:intron 25.0%
!! TCTTCTTCAATTTTTACCTT+TGG - chr4_3:22716332-22716351 Msa0634890:five_prime_UTR 25.0%
! AAGGATAATAAGCAAGTAAT+GGG + chr4_3:22716531-22716550 None:intergenic 25.0%
! AAAGGATAATAAGCAAGTAA+TGG + chr4_3:22716532-22716551 None:intergenic 25.0%
! TACTAAGAAGAATGAAACAA+AGG + chr4_3:22716550-22716569 None:intergenic 25.0%
! CTAAAACAAAATACTGTAGA+GGG + chr4_3:22716627-22716646 None:intergenic 25.0%
! ACTAAAACAAAATACTGTAG+AGG + chr4_3:22716628-22716647 None:intergenic 25.0%
! ACCAAAATACAATTAAAGAG+AGG - chr4_3:22716832-22716851 Msa0634890:intron 25.0%
!! GGTTCTAATCTTAAAATCTT+GGG - chr4_3:22716859-22716878 Msa0634890:intron 25.0%
! TCTTAAAATCTTGGGAAAAA+AGG - chr4_3:22716867-22716886 Msa0634890:intron 25.0%
! CTTAAAATCTTGGGAAAAAA+GGG - chr4_3:22716868-22716887 Msa0634890:intron 25.0%
! TTAATGATTTCCTTGGTTAT+TGG + chr4_3:22717024-22717043 None:intergenic 25.0%
!! GGTTTTCTATAAAAATTGGA+TGG + chr4_3:22717496-22717515 None:intergenic 25.0%
!! CACAGGTTTTCTATAAAAAT+TGG + chr4_3:22717500-22717519 None:intergenic 25.0%
!!! TCAGTTGTTTTCAAAGTTAA+AGG + chr4_3:22717572-22717591 None:intergenic 25.0%
! CTAAAAAACCGATGATAAAA+AGG - chr4_3:22717612-22717631 Msa0634890:five_prime_UTR 25.0%
!!! CTTATTTTGTGCAATAATCT+TGG - chr4_3:22717694-22717713 Msa0634890:intron 25.0%
! AAGAAGAAAAGTAAAAGTCA+GGG - chr4_3:22717805-22717824 Msa0634890:intron 25.0%
! ATTAATGTTTGTCTTCATAG+AGG + chr4_3:22718060-22718079 None:intergenic 25.0%
!! TACCAGAACATTTTATTATC+TGG - chr4_3:22718231-22718250 Msa0634890:intron 25.0%
! ATCCAGATAATAAAATGTTC+TGG + chr4_3:22718236-22718255 None:intergenic 25.0%
! AGGAAAAAAAAAACAGAGTA+AGG + chr4_3:22718534-22718553 None:intergenic 25.0%
! GAAAAGGTTATAAAGATTCT+AGG + chr4_3:22718557-22718576 None:intergenic 25.0%
! AAACATGCACATATTAGAAA+AGG + chr4_3:22718573-22718592 None:intergenic 25.0%
! TGTTATCATACAATTGAATC+CGG + chr4_3:22718759-22718778 None:intergenic 25.0%
! ATCTGAAAGAAACAAAACTT+TGG + chr4_3:22718866-22718885 None:intergenic 25.0%
!!! ATGGTGGTTTTAAGATATAT+GGG - chr4_3:22718930-22718949 Msa0634890:intron 25.0%
CAGAGAATGAATTAACGTTT+AGG + chr4_3:22708973-22708992 None:intergenic 30.0%
GAAAGATTACCATTGAAATG+TGG + chr4_3:22709088-22709107 None:intergenic 30.0%
CGGTGCAAATAACAATAAAA+TGG + chr4_3:22709140-22709159 None:intergenic 30.0%
CAAAAGCTTCAATAAAATCG+CGG + chr4_3:22709160-22709179 None:intergenic 30.0%
!! GCCAATTTTGATATGCATTT+AGG - chr4_3:22709237-22709256 Msa0634890:CDS 30.0%
CCCTAAATGCATATCAAAAT+TGG + chr4_3:22709241-22709260 None:intergenic 30.0%
!!! ATGTGAAGTGGTTTTATGTT+TGG - chr4_3:22709690-22709709 Msa0634890:CDS 30.0%
!!! TGTGAAGTGGTTTTATGTTT+GGG - chr4_3:22709691-22709710 Msa0634890:CDS 30.0%
! ATTGATTCTAACTTGAAGCT+AGG + chr4_3:22709789-22709808 None:intergenic 30.0%
CAAGTTAGAATCAATTCTAG+AGG - chr4_3:22709794-22709813 Msa0634890:intron 30.0%
TTTGACAAGTTTAGTTGCTA+TGG + chr4_3:22709836-22709855 None:intergenic 30.0%
! TTTGGAATACGAAATAATGG+TGG - chr4_3:22710054-22710073 Msa0634890:CDS 30.0%
GTTAGGCAAAAACTATACTT+AGG + chr4_3:22710101-22710120 None:intergenic 30.0%
!!! TCGTGCACCTTTTTTTTTTT+TGG - chr4_3:22710468-22710487 Msa0634890:intron 30.0%
AATGTGTAAAAAATGCATGC+TGG + chr4_3:22710518-22710537 None:intergenic 30.0%
!! AAACTTGGTGCATTTGATTA+AGG - chr4_3:22710558-22710577 Msa0634890:intron 30.0%
CATTTGATTAAGGCTAAGTT+TGG - chr4_3:22710568-22710587 Msa0634890:intron 30.0%
ATTACATGATAATCCAACCA+TGG + chr4_3:22710749-22710768 None:intergenic 30.0%
AATGTGAACTTCTTAGAACT+AGG + chr4_3:22710993-22711012 None:intergenic 30.0%
GTTAAGCCTGAATCATTATT+TGG - chr4_3:22711026-22711045 Msa0634890:intron 30.0%
CACAATCCAAATAATGATTC+AGG + chr4_3:22711035-22711054 None:intergenic 30.0%
AGAAAAAGGACAATTGGATT+TGG + chr4_3:22711090-22711109 None:intergenic 30.0%
! CAATTGTCCTTTTTCTTTGT+GGG - chr4_3:22711094-22711113 Msa0634890:intron 30.0%
AAAGAAACCCACAAAGAAAA+AGG + chr4_3:22711104-22711123 None:intergenic 30.0%
!! AGATTTCTCTGTTTCTGTAT+TGG + chr4_3:22711179-22711198 None:intergenic 30.0%
AATGATGCAAACATCATCAA+GGG + chr4_3:22711340-22711359 None:intergenic 30.0%
AAATGATGCAAACATCATCA+AGG + chr4_3:22711341-22711360 None:intergenic 30.0%
TTCTTGCAAAGAGAAGAAAT+TGG + chr4_3:22711560-22711579 None:intergenic 30.0%
TTCCAATAATACTGTTCTCA+TGG + chr4_3:22711673-22711692 None:intergenic 30.0%
!! ACTTGCTTTTCTCATCTTTA+AGG - chr4_3:22711776-22711795 Msa0634890:intron 30.0%
AATTATGTTTGTACTGAAGC+AGG - chr4_3:22711850-22711869 Msa0634890:intron 30.0%
ATTATGTTTGTACTGAAGCA+GGG - chr4_3:22711851-22711870 Msa0634890:intron 30.0%
! TTTTTATTATCCCCAACATC+CGG + chr4_3:22711918-22711937 None:intergenic 30.0%
! TAGTGCTACTGAAACAAAAT+TGG - chr4_3:22712112-22712131 Msa0634890:intron 30.0%
ATTATGTTTGTACTGTAGCA+AGG - chr4_3:22712264-22712283 Msa0634890:intron 30.0%
AATTATGTTTGTACTGAAGC+AGG - chr4_3:22711850-22711869 Msa0634890:intron 30.0%
ATTATGTTTGTACTGAAGCA+GGG - chr4_3:22711851-22711870 Msa0634890:intron 30.0%
ATGAACACTCACTTATCATT+AGG + chr4_3:22712958-22712977 None:intergenic 30.0%
!! TCTCTATATTTGTTGTTCAC+AGG - chr4_3:22713018-22713037 Msa0634890:intron 30.0%
!!! TTAATTCCGGTCAGTTTTTT+TGG - chr4_3:22713295-22713314 Msa0634890:intron 30.0%
!!! GTTTTTTTGGAATGTCAAGT+TGG - chr4_3:22713308-22713327 Msa0634890:intron 30.0%
GAAACAAACACATACATTGT+TGG + chr4_3:22713369-22713388 None:intergenic 30.0%
TTGCAATTTATCTGCATTCA+GGG + chr4_3:22713670-22713689 None:intergenic 30.0%
TTTGCAATTTATCTGCATTC+AGG + chr4_3:22713671-22713690 None:intergenic 30.0%
ACTAACAAAGTCTACATTCA+GGG + chr4_3:22713699-22713718 None:intergenic 30.0%
TTTGCATATTATCTGCATTC+AGG - chr4_3:22713819-22713838 Msa0634890:intron 30.0%
TTGCATATTATCTGCATTCA+GGG - chr4_3:22713820-22713839 Msa0634890:intron 30.0%
!!! CCACAAGCATTTTTAAAATG+GGG + chr4_3:22713893-22713912 None:intergenic 30.0%
TTGTGGATCTTTCTTACATT+AGG - chr4_3:22713907-22713926 Msa0634890:intron 30.0%
!!! TTAAATGATGCTGGTTTTGT+GGG - chr4_3:22713960-22713979 Msa0634890:intron 30.0%
!! TTTTTCAGCTGCAATGTTAA+CGG + chr4_3:22714076-22714095 None:intergenic 30.0%
AACATTGCAGCTGAAAAATT+TGG - chr4_3:22714078-22714097 Msa0634890:intron 30.0%
ACATTGCAGCTGAAAAATTT+GGG - chr4_3:22714079-22714098 Msa0634890:intron 30.0%
! TGAATACACCATTTTCAGTA+TGG + chr4_3:22714162-22714181 None:intergenic 30.0%
CTATAGCAGAATATGAGTAA+GGG + chr4_3:22714223-22714242 None:intergenic 30.0%
ACTATAGCAGAATATGAGTA+AGG + chr4_3:22714224-22714243 None:intergenic 30.0%
TACTCATATTCTGCTATAGT+AGG - chr4_3:22714224-22714243 Msa0634890:intron 30.0%
!! TGCTATAGTAGGAGTTTTAT+TGG - chr4_3:22714235-22714254 Msa0634890:intron 30.0%
AAATCAAAAGTAAAGGCAAC+TGG + chr4_3:22714264-22714283 None:intergenic 30.0%
TACCTAATAGCTATTCACTT+TGG - chr4_3:22714411-22714430 Msa0634890:intron 30.0%
!! ACTTGTAAAGATTTCTGGTT+TGG - chr4_3:22714539-22714558 Msa0634890:intron 30.0%
TTGTTGATCATTGTTGTCTT+TGG - chr4_3:22714562-22714581 Msa0634890:intron 30.0%
TAAAATACTACCTTCTTCAC+AGG - chr4_3:22714613-22714632 Msa0634890:intron 30.0%
GTAGGGTTATTCTAGTATTA+CGG + chr4_3:22714827-22714846 None:intergenic 30.0%
TAGAATAACCCTACAACATA+TGG - chr4_3:22714833-22714852 Msa0634890:intron 30.0%
! GTTGAAAAAAGCACAATTGT+AGG + chr4_3:22715095-22715114 None:intergenic 30.0%
!!! AACTTATTTTGTGCACTTGA+GGG + chr4_3:22715161-22715180 None:intergenic 30.0%
!!! TAACTTATTTTGTGCACTTG+AGG + chr4_3:22715162-22715181 None:intergenic 30.0%
! AGTGATGCAGTATGAAATTT+TGG + chr4_3:22715263-22715282 None:intergenic 30.0%
ATAACCTATGGGAAATTAGA+AGG - chr4_3:22715358-22715377 Msa0634890:CDS 30.0%
TAACCTATGGGAAATTAGAA+GGG - chr4_3:22715359-22715378 Msa0634890:CDS 30.0%
TATATCCCTTACTACGATAA+TGG + chr4_3:22715655-22715674 None:intergenic 30.0%
ACGAAATCAATTTCTTGTGA+TGG - chr4_3:22715704-22715723 Msa0634890:intron 30.0%
TTGCAAAACTGCACAAATTT+AGG + chr4_3:22715797-22715816 None:intergenic 30.0%
CGTTGTTCAAAGAGATTATT+AGG + chr4_3:22715887-22715906 None:intergenic 30.0%
CCCAACATAAATTTCTATTG+AGG + chr4_3:22715984-22716003 None:intergenic 30.0%
GAAAATTAAAGAGGGAAGAA+AGG - chr4_3:22716003-22716022 Msa0634890:five_prime_UTR 30.0%
ATGTGAAAGATAACTGCAAA+AGG + chr4_3:22716201-22716220 None:intergenic 30.0%
GAATTAAAATGCACAACTAC+TGG + chr4_3:22716246-22716265 None:intergenic 30.0%
CTCACAGAATATAGAAAGTA+AGG + chr4_3:22716268-22716287 None:intergenic 30.0%
TAATAGACGTAACACTTGAT+AGG + chr4_3:22716397-22716416 None:intergenic 30.0%
! AGAATTCATGTTTTCCCATT+TGG + chr4_3:22716663-22716682 None:intergenic 30.0%
! GCCTCTCTTTAATTGTATTT+TGG + chr4_3:22716836-22716855 None:intergenic 30.0%
! CGGTTCTAATCTTAAAATCT+TGG - chr4_3:22716858-22716877 Msa0634890:intron 30.0%
TATCATTGTTGTGTTGTGAT+TGG - chr4_3:22716898-22716917 Msa0634890:intron 30.0%
ATCATTGTTGTGTTGTGATT+GGG - chr4_3:22716899-22716918 Msa0634890:intron 30.0%
!! TTAAGCGTACACTTTAAGAT+GGG + chr4_3:22717092-22717111 None:intergenic 30.0%
! TTTAAGCGTACACTTTAAGA+TGG + chr4_3:22717093-22717112 None:intergenic 30.0%
GCAAAAATGAAAAAGAAGAG+TGG + chr4_3:22717164-22717183 None:intergenic 30.0%
GCATACAAAAAAGAAATACG+AGG + chr4_3:22717282-22717301 None:intergenic 30.0%
ATGAAACCATGACTACAATT+AGG + chr4_3:22717349-22717368 None:intergenic 30.0%
CCCAAAAAAGTAAATGCATT+GGG + chr4_3:22717410-22717429 None:intergenic 30.0%
!!! CCCAATGCATTTACTTTTTT+GGG - chr4_3:22717407-22717426 Msa0634890:intron 30.0%
TCCCAAAAAAGTAAATGCAT+TGG + chr4_3:22717411-22717430 None:intergenic 30.0%
AAAACCTGTGAAATACTTGT+TGG - chr4_3:22717510-22717529 Msa0634890:five_prime_UTR 30.0%
AAACCTGTGAAATACTTGTT+GGG - chr4_3:22717511-22717530 Msa0634890:five_prime_UTR 30.0%
! TTGTTGGGTAATGGTATAAT+TGG - chr4_3:22717526-22717545 Msa0634890:five_prime_UTR 30.0%
! CCATCTTTCCTTTTTATCAT+CGG + chr4_3:22717623-22717642 None:intergenic 30.0%
GAAGAAGAAAAGTAAAAGTC+AGG - chr4_3:22717804-22717823 Msa0634890:intron 30.0%
ATTTGACAATGTTCGAACTT+GGG + chr4_3:22717926-22717945 None:intergenic 30.0%
TAAATGGTGATATGTTACCA+AGG + chr4_3:22718213-22718232 None:intergenic 30.0%
GGATATGACTATTGTATACT+TGG - chr4_3:22718252-22718271 Msa0634890:intron 30.0%
TAAATCACATACGTCATTGA+TGG + chr4_3:22718484-22718503 None:intergenic 30.0%
AAGGTTATAAAGATTCTAGG+AGG + chr4_3:22718554-22718573 None:intergenic 30.0%
TTCTAATATGTGCATGTTTC+AGG - chr4_3:22718574-22718593 Msa0634890:intron 30.0%
AAAACATACCACCAAATTCA+TGG - chr4_3:22718619-22718638 Msa0634890:intron 30.0%
TCATAAACCAACCATGAATT+TGG + chr4_3:22718633-22718652 None:intergenic 30.0%
GAGTGAATATGGGAAATATA+TGG - chr4_3:22718713-22718732 Msa0634890:intron 30.0%
ATACCAAAAATGAATCACGA+GGG + chr4_3:22718811-22718830 None:intergenic 30.0%
TATACCAAAAATGAATCACG+AGG + chr4_3:22718812-22718831 None:intergenic 30.0%
!!! GTGATTCATTTTTGGTATAG+AGG - chr4_3:22718813-22718832 Msa0634890:five_prime_UTR 30.0%
!!! CATGGTGGTTTTAAGATATA+TGG - chr4_3:22718929-22718948 Msa0634890:intron 30.0%
!!! GGTTTTAAGATATATGGGAT+TGG - chr4_3:22718935-22718954 Msa0634890:intron 30.0%
!!! CTCTGAAACAATGGCTTTTT+GGG - chr4_3:22708905-22708924 Msa0634890:three_prime_UTR 35.0%
!! TCTGAAACAATGGCTTTTTG+GGG - chr4_3:22708906-22708925 Msa0634890:three_prime_UTR 35.0%
GAATCATAAGTGTGAGTGAA+AGG + chr4_3:22709050-22709069 None:intergenic 35.0%
CACACTTATGATTCTTCCAA+AGG - chr4_3:22709056-22709075 Msa0634890:three_prime_UTR 35.0%
AGATTACCATTGAAATGTGG+AGG + chr4_3:22709085-22709104 None:intergenic 35.0%
ATCAAAATTGGCCGTGAATT+TGG + chr4_3:22709229-22709248 None:intergenic 35.0%
! ATATGCATTTAGGGTGTGTT+TGG - chr4_3:22709247-22709266 Msa0634890:CDS 35.0%
GGTAAAAAAACCCAAACGAA+CGG - chr4_3:22709592-22709611 Msa0634890:intron 35.0%
GTAAAAAAACCCAAACGAAC+GGG - chr4_3:22709593-22709612 Msa0634890:intron 35.0%
CAAAACCAAACACACACTAA+AGG + chr4_3:22709619-22709638 None:intergenic 35.0%
ACATGCAATACGTTCATGTT+TGG + chr4_3:22709895-22709914 None:intergenic 35.0%
ACATGAACGTATTGCATGTT+TGG - chr4_3:22709896-22709915 Msa0634890:CDS 35.0%
CATTGAGTGCATATTTGGAT+TGG + chr4_3:22710030-22710049 None:intergenic 35.0%
ACATGCATTGAGTGCATATT+TGG + chr4_3:22710035-22710054 None:intergenic 35.0%
ATATGCACTCAATGCATGTT+TGG - chr4_3:22710036-22710055 Msa0634890:CDS 35.0%
AACAGATTAAGTGCAAGCTT+AGG + chr4_3:22710134-22710153 None:intergenic 35.0%
! TTTGAATTTCAGGCCACTTT+GGG - chr4_3:22710190-22710209 Msa0634890:intron 35.0%
! TAAAGAGAGCACAGATAAAC+AGG + chr4_3:22710271-22710290 None:intergenic 35.0%
TGAGTCCTTGCAATTGAATT+TGG - chr4_3:22710303-22710322 Msa0634890:intron 35.0%
AAGCTCCAAATTCAATTGCA+AGG + chr4_3:22710311-22710330 None:intergenic 35.0%
AATGTTATTCTTTCCGTCCT+TGG - chr4_3:22710343-22710362 Msa0634890:intron 35.0%
CATTCAGGAAAATGGAAACT+TGG - chr4_3:22710543-22710562 Msa0634890:intron 35.0%
GTGCTTATAAAGTTAACCGA+AGG - chr4_3:22710677-22710696 Msa0634890:intron 35.0%
! AAGTTGATTAAGTCCATGGT+TGG - chr4_3:22710733-22710752 Msa0634890:intron 35.0%
GAACTTCTTAGAACTAGGTT+GGG + chr4_3:22710988-22711007 None:intergenic 35.0%
TGAACTTCTTAGAACTAGGT+TGG + chr4_3:22710989-22711008 None:intergenic 35.0%
CCACAAAGAAAAAGGACAAT+TGG + chr4_3:22711096-22711115 None:intergenic 35.0%
! CCAATTGTCCTTTTTCTTTG+TGG - chr4_3:22711093-22711112 Msa0634890:intron 35.0%
CTTGATTTCCTTCACTACAA+TGG - chr4_3:22711126-22711145 Msa0634890:intron 35.0%
TTTCCTTCACTACAATGGAA+AGG - chr4_3:22711131-22711150 Msa0634890:intron 35.0%
TTCCTTCACTACAATGGAAA+GGG - chr4_3:22711132-22711151 Msa0634890:intron 35.0%
ACAATGGAAAGGGAATCATA+TGG - chr4_3:22711142-22711161 Msa0634890:intron 35.0%
ATATTTGAGCTTGCCTTCAT+TGG + chr4_3:22711284-22711303 None:intergenic 35.0%
ACATCATCAAGGGATTGAAA+TGG + chr4_3:22711330-22711349 None:intergenic 35.0%
TAAATCCTTTGTAAGGGTCT+TGG - chr4_3:22711583-22711602 Msa0634890:intron 35.0%
GACCATGAGAACAGTATTAT+TGG - chr4_3:22711668-22711687 Msa0634890:intron 35.0%
TTCCTGATCAAAGTGATCTT+GGG + chr4_3:22712027-22712046 None:intergenic 35.0%
TTTCCTGATCAAAGTGATCT+TGG + chr4_3:22712028-22712047 None:intergenic 35.0%
TTTCAGTAGCACTATTCTCA+TGG + chr4_3:22712106-22712125 None:intergenic 35.0%
! GAAACCAAGAGTTCTAGTAA+TGG - chr4_3:22712382-22712401 Msa0634890:CDS 35.0%
TTGTGCAGCATTATCTAGTT+CGG + chr4_3:22711982-22712001 None:intergenic 35.0%
AGATGAGCCAAAAATGAACA+TGG - chr4_3:22712001-22712020 Msa0634890:intron 35.0%
!! GTTGATGATGGCAAAAAAGA+CGG - chr4_3:22712508-22712527 Msa0634890:intron 35.0%
TCGCAGATATTCAAACTCAT+AGG - chr4_3:22712584-22712603 Msa0634890:intron 35.0%
GCAAGTGTGTATTTGAACAA+TGG + chr4_3:22712630-22712649 None:intergenic 35.0%
! TTTTTCATATCCCCAACATC+CGG + chr4_3:22712787-22712806 None:intergenic 35.0%
! AAGCACTCGTAATATTTCTG+CGG + chr4_3:22713140-22713159 None:intergenic 35.0%
GAGTGCTTGATTTAAAGATG+AGG - chr4_3:22713152-22713171 Msa0634890:CDS 35.0%
!! CAGGTTGCTATTTATATCTC+AGG - chr4_3:22713175-22713194 Msa0634890:CDS 35.0%
ACTTCTATTTAGTGTCAAGC+TGG - chr4_3:22713251-22713270 Msa0634890:CDS 35.0%
GACATTCCAAAAAAACTGAC+CGG + chr4_3:22713304-22713323 None:intergenic 35.0%
TTTGTTTCAAATGACCCATG+TGG - chr4_3:22713381-22713400 Msa0634890:intron 35.0%
TATACTGTACATTGCCACAT+GGG + chr4_3:22713398-22713417 None:intergenic 35.0%
TATGAATCTATGTCACCACT+TGG - chr4_3:22713457-22713476 Msa0634890:intron 35.0%
!!! GCGGTTACTTTTTACTTTGA+CGG - chr4_3:22713566-22713585 Msa0634890:intron 35.0%
!!! CGGTTACTTTTTACTTTGAC+GGG - chr4_3:22713567-22713586 Msa0634890:intron 35.0%
! TAGTCACTTTAGTCCTTGAA+TGG - chr4_3:22713623-22713642 Msa0634890:intron 35.0%
! AGTCACTTTAGTCCTTGAAT+GGG - chr4_3:22713624-22713643 Msa0634890:intron 35.0%
GACTAACAAAGTCTACATTC+AGG + chr4_3:22713700-22713719 None:intergenic 35.0%
TCAGGGACTAAATTGACTAA+CGG + chr4_3:22713714-22713733 None:intergenic 35.0%
ACTAACGAAGTCTACATTCA+GGG + chr4_3:22713763-22713782 None:intergenic 35.0%
!! CCCCATTTTAAAAATGCTTG+TGG - chr4_3:22713890-22713909 Msa0634890:intron 35.0%
GATCTTTCTTACATTAGGCA+TGG - chr4_3:22713912-22713931 Msa0634890:intron 35.0%
TCAATAGGCTTAAATGATGC+TGG - chr4_3:22713951-22713970 Msa0634890:intron 35.0%
!!! CTTAAATGATGCTGGTTTTG+TGG - chr4_3:22713959-22713978 Msa0634890:intron 35.0%
!! TTTTCTTCTAAGAGTCAGAC+TGG - chr4_3:22714046-22714065 Msa0634890:intron 35.0%
CATTGCAGCTGAAAAATTTG+GGG - chr4_3:22714080-22714099 Msa0634890:intron 35.0%
AGTGGTTACCATACTGAAAA+TGG - chr4_3:22714151-22714170 Msa0634890:intron 35.0%
TGCCAAAGTGAATAGCTATT+AGG + chr4_3:22714416-22714435 None:intergenic 35.0%
GCAATGTTCTTGAACATGAA+AGG - chr4_3:22714478-22714497 Msa0634890:intron 35.0%
TCATTGTTGTCTTTGGTATG+AGG - chr4_3:22714569-22714588 Msa0634890:intron 35.0%
! AGAAGGTAGTATTTTATCCG+TGG + chr4_3:22714609-22714628 None:intergenic 35.0%
CAAAGAAAAAAAGGAAGGAG+CGG - chr4_3:22714660-22714679 Msa0634890:intron 35.0%
AGTAATCAGGACACAGTTAA+TGG - chr4_3:22714758-22714777 Msa0634890:intron 35.0%
GTAATCAGGACACAGTTAAT+GGG - chr4_3:22714759-22714778 Msa0634890:intron 35.0%
TTGAAATACTCTTCATGTCC+TGG - chr4_3:22714876-22714895 Msa0634890:intron 35.0%
GAGTTCTATTGCATATATCC+AGG + chr4_3:22714897-22714916 None:intergenic 35.0%
TCAATGTAGATGTCATGTTC+AGG - chr4_3:22715230-22715249 Msa0634890:intron 35.0%
ATTAAAATTGCGTTGCATCC+TGG - chr4_3:22715304-22715323 Msa0634890:CDS 35.0%
!!! TTAGTCTTCTCTTTTTTGCC+AGG + chr4_3:22715325-22715344 None:intergenic 35.0%
AAACTTATCACTCAGACCAT+CGG + chr4_3:22715556-22715575 None:intergenic 35.0%
!! CTACGATAATGGAGAGATAT+TGG + chr4_3:22715644-22715663 None:intergenic 35.0%
ATCTCTCCATTATCGTAGTA+AGG - chr4_3:22715646-22715665 Msa0634890:intron 35.0%
TCTCTCCATTATCGTAGTAA+GGG - chr4_3:22715647-22715666 Msa0634890:intron 35.0%
GATTCCATCATTCATCTCTT+TGG - chr4_3:22715675-22715694 Msa0634890:intron 35.0%
ATTGCCAAAGAGATGAATGA+TGG + chr4_3:22715682-22715701 None:intergenic 35.0%
TAGGACCAAATGACATAAGA+TGG + chr4_3:22715917-22715936 None:intergenic 35.0%
TTATCTGGGGAAATCATTAG+TGG - chr4_3:22716112-22716131 Msa0634890:intron 35.0%
GGAAATCATTAGTGGTAGTT+AGG - chr4_3:22716120-22716139 Msa0634890:intron 35.0%
CAGACAATATTGTTCTCTGT+AGG - chr4_3:22716144-22716163 Msa0634890:intron 35.0%
GCAAAAGGATGAATATCCTA+AGG + chr4_3:22716186-22716205 None:intergenic 35.0%
GCAACAAACTATCTTACCAT+TGG - chr4_3:22716306-22716325 Msa0634890:five_prime_UTR 35.0%
AAATTGAAGAAGACTGCCAA+TGG + chr4_3:22716325-22716344 None:intergenic 35.0%
!! TAAGCAAGTAATGGGCATTA+AGG + chr4_3:22716523-22716542 None:intergenic 35.0%
! ATTCATGTTTTCCCATTTGG+TGG + chr4_3:22716660-22716679 None:intergenic 35.0%
ATACAATTAAAGAGAGGCTG+CGG - chr4_3:22716838-22716857 Msa0634890:intron 35.0%
GCATGAGTTAATGATTTCCT+TGG + chr4_3:22717031-22717050 None:intergenic 35.0%
!! ACTTTAAGATGGGGTAACAT+AGG + chr4_3:22717082-22717101 None:intergenic 35.0%
!! TAAGCGTACACTTTAAGATG+GGG + chr4_3:22717091-22717110 None:intergenic 35.0%
ACAGTTTGAGTGAGAATAAG+TGG + chr4_3:22717129-22717148 None:intergenic 35.0%
ATATGCGCCAGTAACAAAAT+GGG + chr4_3:22717308-22717327 None:intergenic 35.0%
AATATGCGCCAGTAACAAAA+TGG + chr4_3:22717309-22717328 None:intergenic 35.0%
! TTGTTACTGGCGCATATTTT+TGG - chr4_3:22717311-22717330 Msa0634890:intron 35.0%
AACTCTCCTAATTGTAGTCA+TGG - chr4_3:22717340-22717359 Msa0634890:intron 35.0%
TTCATGCTGTGTGAGTTAAA+AGG - chr4_3:22717379-22717398 Msa0634890:intron 35.0%
!!! GCCCAATGCATTTACTTTTT+TGG - chr4_3:22717406-22717425 Msa0634890:intron 35.0%
TTACCCAACAAGTATTTCAC+AGG + chr4_3:22717517-22717536 None:intergenic 35.0%
! GTGAAATACTTGTTGGGTAA+TGG - chr4_3:22717517-22717536 Msa0634890:five_prime_UTR 35.0%
CCGATGATAAAAAGGAAAGA+TGG - chr4_3:22717620-22717639 Msa0634890:five_prime_UTR 35.0%
CATTTGACAATGTTCGAACT+TGG + chr4_3:22717927-22717946 None:intergenic 35.0%
CAAGTTCGAACATTGTCAAA+TGG - chr4_3:22717925-22717944 Msa0634890:intron 35.0%
TTATTCAAGAGCTTGAGACA+GGG - chr4_3:22717953-22717972 Msa0634890:intron 35.0%
TTGAGACAGGGAAAGAAAAT+GGG - chr4_3:22717965-22717984 Msa0634890:intron 35.0%
TTACCAAGGCGAAATTTGAA+AGG + chr4_3:22718199-22718218 None:intergenic 35.0%
AGGTAAAGGAGAAGTTATTG+AGG - chr4_3:22718300-22718319 Msa0634890:intron 35.0%
GGTAAAGGAGAAGTTATTGA+GGG - chr4_3:22718301-22718320 Msa0634890:intron 35.0%
! TCTCTCTTTTCATGATTCTC+AGG - chr4_3:22718421-22718440 Msa0634890:intron 35.0%
TAAACCAACCATGAATTTGG+TGG + chr4_3:22718630-22718649 None:intergenic 35.0%
! GTTGGTTTATGACTTTGAAC+TGG - chr4_3:22718641-22718660 Msa0634890:intron 35.0%
TGGTCATGTTTGAGTGAATA+TGG - chr4_3:22718702-22718721 Msa0634890:intron 35.0%
GGTCATGTTTGAGTGAATAT+GGG - chr4_3:22718703-22718722 Msa0634890:intron 35.0%
TATGGGAAATATATGGAGTC+AGG - chr4_3:22718720-22718739 Msa0634890:intron 35.0%
! ACAGTTTTCTGTTGAATCTC+TGG - chr4_3:22718776-22718795 Msa0634890:intron 35.0%
TACCAAAAATGAATCACGAG+GGG + chr4_3:22718810-22718829 None:intergenic 35.0%
!! TTTTTGGTATAGAGGACAGT+TGG - chr4_3:22718821-22718840 Msa0634890:five_prime_UTR 35.0%
CAACATTATATGTGGAGACA+TGG + chr4_3:22719027-22719046 None:intergenic 35.0%
!! CAACTCTTCCTCTGAAACAA+TGG - chr4_3:22708896-22708915 Msa0634890:three_prime_UTR 40.0%
CCAAAAAGCCATTGTTTCAG+AGG + chr4_3:22708907-22708926 None:intergenic 40.0%
!!! CCTCTGAAACAATGGCTTTT+TGG - chr4_3:22708904-22708923 Msa0634890:three_prime_UTR 40.0%
GTGATTGTGATTGTGATTGC+AGG - chr4_3:22709002-22709021 Msa0634890:three_prime_UTR 40.0%
! CATTTAGGGTGTGTTTGGTT+TGG - chr4_3:22709252-22709271 Msa0634890:CDS 40.0%
AAAGCGAGCTTAATGTGAAG+TGG - chr4_3:22709678-22709697 Msa0634890:intron 40.0%
TACACTTCCAGAAGCAATTC+TGG - chr4_3:22709864-22709883 Msa0634890:intron 40.0%
TAGGAGCCTCAACAAAATCA+TGG + chr4_3:22710082-22710101 None:intergenic 40.0%
!! GCTTAGGTTGATGGTAAGTT+AGG + chr4_3:22710118-22710137 None:intergenic 40.0%
!! TAAGTGCAAGCTTAGGTTGA+TGG + chr4_3:22710127-22710146 None:intergenic 40.0%
CTTTGAATTTCAGGCCACTT+TGG - chr4_3:22710189-22710208 Msa0634890:intron 40.0%
AAGCACTCTGCAATGTAATG+TGG - chr4_3:22710234-22710253 Msa0634890:intron 40.0%
AGCACTCTGCAATGTAATGT+GGG - chr4_3:22710235-22710254 Msa0634890:intron 40.0%
TATCTGTGCTCTCTTTATCC+AGG - chr4_3:22710274-22710293 Msa0634890:intron 40.0%
! GCAATTGAATTTGGAGCTTG+AGG - chr4_3:22710312-22710331 Msa0634890:intron 40.0%
! AATTTGGAGCTTGAGGAAGA+TGG - chr4_3:22710319-22710338 Msa0634890:intron 40.0%
CATCCATAGTATTGCCATAG+CGG + chr4_3:22710411-22710430 None:intergenic 40.0%
AGAACAGTTGACAAGGAGTT+GGG - chr4_3:22710708-22710727 Msa0634890:intron 40.0%
ATGTGCAAGTCTCATAGTCA+TGG - chr4_3:22710911-22710930 Msa0634890:intron 40.0%
GTTCACATTGAGTCCTTTGA+TGG - chr4_3:22711004-22711023 Msa0634890:intron 40.0%
GATTCAGGCTTAACCATCAA+AGG + chr4_3:22711020-22711039 None:intergenic 40.0%
TTCCCTTTCCATTGTAGTGA+AGG + chr4_3:22711137-22711156 None:intergenic 40.0%
GCATCTCCTATTTCCAATGA+AGG - chr4_3:22711268-22711287 Msa0634890:intron 40.0%
AGCTTGCCTTCATTGGAAAT+AGG + chr4_3:22711277-22711296 None:intergenic 40.0%
TTTGACTGTGATTACTGCAG+AGG - chr4_3:22711367-22711386 Msa0634890:intron 40.0%
GACAAAGAAGCAATTGATGC+TGG - chr4_3:22711629-22711648 Msa0634890:intron 40.0%
TCACTGAGAGTCAGATTCAT+AGG - chr4_3:22711717-22711736 Msa0634890:intron 40.0%
! AGCATTATCTAGTTCAGTGG+AGG + chr4_3:22711976-22711995 None:intergenic 40.0%
! TGCAGCATTATCTAGTTCAG+TGG + chr4_3:22711979-22711998 None:intergenic 40.0%
! TCTTGGGACGTGTTCATTTT+TGG + chr4_3:22712011-22712030 None:intergenic 40.0%
GTTGATGCTGGCAAAAAAGA+CGG - chr4_3:22712074-22712093 Msa0634890:intron 40.0%
ATCGCCATTACTAGAACTCT+TGG + chr4_3:22712389-22712408 None:intergenic 40.0%
!! GACAAAGAAGCAGTTGATGA+TGG - chr4_3:22712496-22712515 Msa0634890:CDS 40.0%
GAAAAAGAAACCAAGAGCTC+TGG - chr4_3:22712832-22712851 Msa0634890:intron 40.0%
ATGTTCATTACCAGAGCTCT+TGG + chr4_3:22712845-22712864 None:intergenic 40.0%
TTGCGCAGCATTATCTAGAT+CGG + chr4_3:22712872-22712891 None:intergenic 40.0%
! TCCTCGTCTGTGTTCATTTT+TGG + chr4_3:22712901-22712920 None:intergenic 40.0%
! ACTTATCATTAGGTTGCTGC+TGG + chr4_3:22712948-22712967 None:intergenic 40.0%
GCTTGATTTAAAGATGAGGC+AGG - chr4_3:22713156-22713175 Msa0634890:CDS 40.0%
CTATACTGTACATTGCCACA+TGG + chr4_3:22713399-22713418 None:intergenic 40.0%
TGTGGCAATGTACAGTATAG+TGG - chr4_3:22713399-22713418 Msa0634890:intron 40.0%
! GTCACTTTAGTCCTTGAATG+GGG - chr4_3:22713625-22713644 Msa0634890:intron 40.0%
GTCAATTTAGTCCCTGAATG+CGG - chr4_3:22713656-22713675 Msa0634890:intron 40.0%
GACTAACGAAGTCTACATTC+AGG + chr4_3:22713764-22713783 None:intergenic 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG + chr4_3:22713866-22713885 None:intergenic 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG + chr4_3:22713779-22713798 None:intergenic 40.0%
CTTACACCTTTGTTCTGCAT+CGG - chr4_3:22714446-22714465 Msa0634890:intron 40.0%
ATACTACCTTCTTCACAGGT+TGG - chr4_3:22714617-22714636 Msa0634890:intron 40.0%
!!! CGCTCCTTCCTTTTTTTCTT+TGG + chr4_3:22714662-22714681 None:intergenic 40.0%
AATGTTGTTAACCTGCCTCA+GGG - chr4_3:22714725-22714744 Msa0634890:intron 40.0%
TTACTGTGTTCATTTCCCTG+AGG + chr4_3:22714743-22714762 None:intergenic 40.0%
GGGAAATGAACACAGTAATC+AGG - chr4_3:22714745-22714764 Msa0634890:intron 40.0%
TCAAGAGAAGTCATACCAGA+AGG + chr4_3:22715038-22715057 None:intergenic 40.0%
AAAATGCGCGGTATATCGAA+AGG + chr4_3:22715066-22715085 None:intergenic 40.0%
TGTAGGAAGAACAAAATGCG+CGG + chr4_3:22715078-22715097 None:intergenic 40.0%
CATCCCTTCTAATTTCCCAT+AGG + chr4_3:22715365-22715384 None:intergenic 40.0%
!! CTTTTGAGAATCTGTCTCAG+AGG + chr4_3:22715418-22715437 None:intergenic 40.0%
AACAAAGCTTCACATCCTGA+AGG - chr4_3:22715468-22715487 Msa0634890:intron 40.0%
AGAGCAAAGCAAAGGAATGA+TGG + chr4_3:22715860-22715879 None:intergenic 40.0%
TAGGTCTAAGAGCAAAGCAA+AGG + chr4_3:22715868-22715887 None:intergenic 40.0%
GTGAGCCATCTTATGTCATT+TGG - chr4_3:22715909-22715928 Msa0634890:five_prime_UTR 40.0%
! TGTCATTTGGTCCTACTATG+TGG - chr4_3:22715922-22715941 Msa0634890:five_prime_UTR 40.0%
AGTCATGAGAACCCATAGTT+GGG + chr4_3:22715950-22715969 None:intergenic 40.0%
! GAAGAAAGGGCATACTTATG+TGG - chr4_3:22716017-22716036 Msa0634890:intron 40.0%
TAGTGTGTTATCTCCAACTC+TGG - chr4_3:22716053-22716072 Msa0634890:intron 40.0%
AGTGTGTTATCTCCAACTCT+GGG - chr4_3:22716054-22716073 Msa0634890:intron 40.0%
TATTGTTCTCTGTAGGAGCT+CGG - chr4_3:22716151-22716170 Msa0634890:intron 40.0%
TTCTGTGAGTTGCTGTGATT+CGG - chr4_3:22716279-22716298 Msa0634890:five_prime_UTR 40.0%
ATGGGCATTAAGGATGATGA+TGG + chr4_3:22716513-22716532 None:intergenic 40.0%
! AGTTTTCACAGACCACCAAA+TGG - chr4_3:22716645-22716664 Msa0634890:five_prime_UTR 40.0%
! GTTTTCACAGACCACCAAAT+GGG - chr4_3:22716646-22716665 Msa0634890:five_prime_UTR 40.0%
GTCAGAGAGATTGAAACAGT+AGG - chr4_3:22716804-22716823 Msa0634890:intron 40.0%
AGGAAGTGATCCAATAACCA+AGG - chr4_3:22717011-22717030 Msa0634890:intron 40.0%
AGTATGTTAGGGAACAAGAG+AGG + chr4_3:22717670-22717689 None:intergenic 40.0%
! TCTTCGGATTGATTTCCATC+AGG + chr4_3:22717766-22717785 None:intergenic 40.0%
AAACTCTGATGTGCCTGTAT+CGG - chr4_3:22717840-22717859 Msa0634890:intron 40.0%
!! TGAGCAAAGTACTGAGATGA+TGG - chr4_3:22717864-22717883 Msa0634890:intron 40.0%
!! AAGTACTGAGATGATGGAAG+AGG - chr4_3:22717870-22717889 Msa0634890:intron 40.0%
GGAAGAGGATGGAAATAATG+TGG - chr4_3:22717885-22717904 Msa0634890:intron 40.0%
AGAGGATGGAAATAATGTGG+AGG - chr4_3:22717888-22717907 Msa0634890:intron 40.0%
GTTATTCAAGAGCTTGAGAC+AGG - chr4_3:22717952-22717971 Msa0634890:intron 40.0%
CTTGAGACAGGGAAAGAAAA+TGG - chr4_3:22717964-22717983 Msa0634890:intron 40.0%
AATGGGAAAATTGCTGCAGT+AGG - chr4_3:22717982-22718001 Msa0634890:intron 40.0%
ATGGGAAAATTGCTGCAGTA+GGG - chr4_3:22717983-22718002 Msa0634890:intron 40.0%
AATTGCTGCAGTAGGGAAAA+AGG - chr4_3:22717990-22718009 Msa0634890:intron 40.0%
TGATGCTGATCTGTAAGCAA+AGG + chr4_3:22718117-22718136 None:intergenic 40.0%
CAGATCAGCATCAATTACAC+TGG - chr4_3:22718124-22718143 Msa0634890:intron 40.0%
! CAATTACACTGGCAAGTTGA+AGG - chr4_3:22718135-22718154 Msa0634890:intron 40.0%
! ACTGGCAAGTTGAAGGAAAA+TGG - chr4_3:22718142-22718161 Msa0634890:intron 40.0%
! CTGGCAAGTTGAAGGAAAAT+GGG - chr4_3:22718143-22718162 Msa0634890:intron 40.0%
! TGGCAAGTTGAAGGAAAATG+GGG - chr4_3:22718144-22718163 Msa0634890:intron 40.0%
GTGGTGATTGAATCAAATGC+TGG - chr4_3:22718166-22718185 Msa0634890:intron 40.0%
! ACACTTACATAGCCTTTTGC+AGG - chr4_3:22718280-22718299 Msa0634890:intron 40.0%
! ACATAGCCTTTTGCAGGTAA+AGG - chr4_3:22718286-22718305 Msa0634890:intron 40.0%
ACTTCTCCTTTACCTGCAAA+AGG + chr4_3:22718295-22718314 None:intergenic 40.0%
AAGGAGAAGTTATTGAGGGT+TGG - chr4_3:22718305-22718324 Msa0634890:intron 40.0%
AGGAGAAGTTATTGAGGGTT+GGG - chr4_3:22718306-22718325 Msa0634890:intron 40.0%
GTTATTGAGGGTTGGGATAT+TGG - chr4_3:22718313-22718332 Msa0634890:intron 40.0%
ATCACATACGTCATTGATGG+TGG + chr4_3:22718481-22718500 None:intergenic 40.0%
! TGCATGTTTCAGGTCTAAGA+AGG - chr4_3:22718584-22718603 Msa0634890:intron 40.0%
! TGTTTCAGGTCTAAGAAGGA+CGG - chr4_3:22718588-22718607 Msa0634890:intron 40.0%
CATACCACCAAATTCATGGT+TGG - chr4_3:22718623-22718642 Msa0634890:intron 40.0%
TTACTCCATCCAACTGATTG+TGG - chr4_3:22718678-22718697 Msa0634890:intron 40.0%
!! TCTCCGGGTTTAGGGTTTTT+AGG - chr4_3:22708853-22708872 Msa0634890:three_prime_UTR 45.0%
CCTCCTAAAAACCCTAAACC+CGG + chr4_3:22708859-22708878 None:intergenic 45.0%
!! GCAGGTGTTGAAATCAAACC+TGG - chr4_3:22709020-22709039 Msa0634890:three_prime_UTR 45.0%
! GTGTGAGTGAAAGGTTTTCC+AGG + chr4_3:22709041-22709060 None:intergenic 45.0%
CTGCGATTCTGCCAAATTCA+CGG - chr4_3:22709215-22709234 Msa0634890:exon 45.0%
! GTGGCACCATGATTTTGTTG+AGG - chr4_3:22710073-22710092 Msa0634890:CDS 45.0%
TGCGGTTATTATCTTTCCCG+TGG - chr4_3:22710385-22710404 Msa0634890:intron 45.0%
ACTGTTCTCAGAAGCTCCTT+CGG + chr4_3:22710696-22710715 None:intergenic 45.0%
! GCTTCTGAGAACAGTTGACA+AGG - chr4_3:22710701-22710720 Msa0634890:intron 45.0%
GAGAACAGTTGACAAGGAGT+TGG - chr4_3:22710707-22710726 Msa0634890:intron 45.0%
GAACAGTTGACAAGGAGTTG+GGG - chr4_3:22710709-22710728 Msa0634890:intron 45.0%
AACAGTTGACAAGGAGTTGG+GGG - chr4_3:22710710-22710729 Msa0634890:intron 45.0%
! GGGGAAGTTGATTAAGTCCA+TGG - chr4_3:22710729-22710748 Msa0634890:intron 45.0%
! GAAGTACCACTTGGTAGAGT+CGG - chr4_3:22711448-22711467 Msa0634890:intron 45.0%
GTAGAGTCGGATGATGATAG+CGG - chr4_3:22711461-22711480 Msa0634890:intron 45.0%
!! GATGATGATAGCGGTCTTGA+AGG - chr4_3:22711470-22711489 Msa0634890:intron 45.0%
CAGTGTGCATGTACAATCTC+AGG - chr4_3:22711511-22711530 Msa0634890:intron 45.0%
CTGATCCAAGACCCTTACAA+AGG + chr4_3:22711591-22711610 None:intergenic 45.0%
CTTTGTAAGGGTCTTGGATC+AGG - chr4_3:22711589-22711608 Msa0634890:intron 45.0%
AAGGGTCTTGGATCAGGAAA+TGG - chr4_3:22711595-22711614 Msa0634890:intron 45.0%
GGAACTGTCAACTGATCTGA+AGG + chr4_3:22711885-22711904 None:intergenic 45.0%
GTCCCAAGATCACTTTGATC+AGG - chr4_3:22712022-22712041 Msa0634890:intron 45.0%
! GACAGAGAAACAGTTGATGC+TGG - chr4_3:22712062-22712081 Msa0634890:intron 45.0%
TTGCAGATAGTCAGACTCAC+AGG - chr4_3:22712150-22712169 Msa0634890:intron 45.0%
AGCTGAACCTTCTGATCACT+TGG - chr4_3:22712288-22712307 Msa0634890:CDS 45.0%
! TGCAGCATTATCTAGTTCGG+TGG + chr4_3:22712413-22712432 None:intergenic 45.0%
! TCCTGGGCCATGTTCATTTT+TGG + chr4_3:22712445-22712464 None:intergenic 45.0%
TTCCTGATCCAAGAGATCCT+GGG + chr4_3:22712461-22712480 None:intergenic 45.0%
TTTCCTGATCCAAGAGATCC+TGG + chr4_3:22712462-22712481 None:intergenic 45.0%
GGATCTCTTGGATCAGGAAA+TGG - chr4_3:22712462-22712481 Msa0634890:CDS 45.0%
AGCTGAACCTTCAAACCAGT+TGG - chr4_3:22712744-22712763 Msa0634890:intron 45.0%
GCCAAAAATGAACACAGACG+AGG - chr4_3:22712897-22712916 Msa0634890:intron 45.0%
CAGAGATGTGAGTCAACATG+TGG + chr4_3:22713428-22713447 None:intergenic 45.0%
!! CTATGTCACCACTTGGCTTT+TGG - chr4_3:22713464-22713483 Msa0634890:intron 45.0%
CTCACTCACTCGTTAATTCG+AGG + chr4_3:22713505-22713524 None:intergenic 45.0%
GAGTGAGTGAGAAAAGACAC+TGG - chr4_3:22713514-22713533 Msa0634890:intron 45.0%
GAGAAAAGACACTGGTGAGA+TGG - chr4_3:22713522-22713541 Msa0634890:intron 45.0%
AAAAGACACTGGTGAGATGG+TGG - chr4_3:22713525-22713544 Msa0634890:intron 45.0%
TCCCTGAAATTGACCATGCA+GGG - chr4_3:22713791-22713810 Msa0634890:intron 45.0%
TCCCTGCATGGTCAATTTCA+GGG + chr4_3:22713795-22713814 None:intergenic 45.0%
TATGCAAAACAGTCCCTGCA+TGG + chr4_3:22713807-22713826 None:intergenic 45.0%
! GTCACTTTAGTCCCTGAATG+GGG + chr4_3:22713865-22713884 None:intergenic 45.0%
TGAAAGCCGATGCAGAACAA+AGG + chr4_3:22714455-22714474 None:intergenic 45.0%
!! TGTTCTGCATCGGCTTTCAA+AGG - chr4_3:22714456-22714475 Msa0634890:intron 45.0%
TGTTGTCTTTGGTATGAGGC+AGG - chr4_3:22714573-22714592 Msa0634890:intron 45.0%
AAAAAGGAAGGAGCGGTCAA+AGG - chr4_3:22714667-22714686 Msa0634890:intron 45.0%
CAATGTTGTTAACCTGCCTC+AGG - chr4_3:22714724-22714743 Msa0634890:intron 45.0%
! TGATGATGCAACAGACACCT+AGG - chr4_3:22714933-22714952 Msa0634890:CDS 45.0%
TATATGAGGAAGGACAGCCT+AGG + chr4_3:22714953-22714972 None:intergenic 45.0%
TGAGAATCTGTCTCAGAGGA+AGG + chr4_3:22715414-22715433 None:intergenic 45.0%
CCATTTCTGTTGTCACCTTC+AGG + chr4_3:22715486-22715505 None:intergenic 45.0%
CCTGAAGGTGACAACAGAAA+TGG - chr4_3:22715483-22715502 Msa0634890:intron 45.0%
GGTGACAACAGAAATGGAGA+AGG - chr4_3:22715489-22715508 Msa0634890:intron 45.0%
ATAGTTGGGGTCCACATAGT+AGG + chr4_3:22715936-22715955 None:intergenic 45.0%
TACTATGTGGACCCCAACTA+TGG - chr4_3:22715935-22715954 Msa0634890:five_prime_UTR 45.0%
ACTATGTGGACCCCAACTAT+GGG - chr4_3:22715936-22715955 Msa0634890:five_prime_UTR 45.0%
GTCATGAGAACCCATAGTTG+GGG + chr4_3:22715949-22715968 None:intergenic 45.0%
GAGTCATGAGAACCCATAGT+TGG + chr4_3:22715951-22715970 None:intergenic 45.0%
! AAAGGGCATACTTATGTGGC+AGG - chr4_3:22716021-22716040 Msa0634890:intron 45.0%
! AAGGGCATACTTATGTGGCA+GGG - chr4_3:22716022-22716041 Msa0634890:intron 45.0%
ATACTTATGTGGCAGGGAGT+GGG - chr4_3:22716028-22716047 Msa0634890:intron 45.0%
GTGTGTTATCTCCAACTCTG+GGG - chr4_3:22716055-22716074 Msa0634890:intron 45.0%
AGTCAGCTATATGAGGACTG+AGG - chr4_3:22716078-22716097 Msa0634890:intron 45.0%
GTCAGCTATATGAGGACTGA+GGG - chr4_3:22716079-22716098 Msa0634890:intron 45.0%
TCAGCTATATGAGGACTGAG+GGG - chr4_3:22716080-22716099 Msa0634890:intron 45.0%
AGGGGAGAGGAAGATTATCT+GGG - chr4_3:22716098-22716117 Msa0634890:intron 45.0%
TCTGTGAGTTGCTGTGATTC+GGG - chr4_3:22716280-22716299 Msa0634890:five_prime_UTR 45.0%
GATGGGGTAACATAGGATGA+AGG + chr4_3:22717075-22717094 None:intergenic 45.0%
GAGTGAGAATAAGTGGCTGA+TGG + chr4_3:22717122-22717141 None:intergenic 45.0%
! ATGCGCTCCCATTTTGTTAC+TGG - chr4_3:22717298-22717317 Msa0634890:intron 45.0%
!! TTATTTCTGGTGCAGCAGTG+TGG - chr4_3:22717720-22717739 Msa0634890:intron 45.0%
GTACTTTGCTCAACCGATAC+AGG + chr4_3:22717856-22717875 None:intergenic 45.0%
!! ACTGAGATGATGGAAGAGGA+TGG - chr4_3:22717874-22717893 Msa0634890:intron 45.0%
GACAATGTTCGAACTTGGGA+AGG + chr4_3:22717922-22717941 None:intergenic 45.0%
! CAAGTTGAAGGAAAATGGGG+TGG - chr4_3:22718147-22718166 Msa0634890:intron 45.0%
GCTCCTTTCAAATTTCGCCT+TGG - chr4_3:22718193-22718212 Msa0634890:intron 45.0%
!! GGTTGGGATATTGGTCTTGA+AGG - chr4_3:22718322-22718341 Msa0634890:intron 45.0%
GGGAAATATATGGAGTCAGG+AGG - chr4_3:22718723-22718742 Msa0634890:intron 45.0%
GTCAGGAGGCAATCAAAATC+CGG - chr4_3:22718737-22718756 Msa0634890:intron 45.0%
! TGCCCCTCGTGATTCATTTT+TGG - chr4_3:22718805-22718824 Msa0634890:five_prime_UTR 45.0%
! CAACGACTCGACATGGTTTT+CGG + chr4_3:22718901-22718920 None:intergenic 45.0%
!!! TTTCTTTTATATTTTAAAAA+GGG - chr4_3:22713596-22713615 Msa0634890:intron 5.0%
!! CCGGGTTTAGGGTTTTTAGG+AGG - chr4_3:22708856-22708875 Msa0634890:three_prime_UTR 50.0%
TGAAATGTGGAGGCGACCTT+TGG + chr4_3:22709075-22709094 None:intergenic 50.0%
AGGTCGCCTCCACATTTCAA+TGG - chr4_3:22709076-22709095 Msa0634890:three_prime_UTR 50.0%
CACTAAAGGCCCGTTCGTTT+GGG + chr4_3:22709605-22709624 None:intergenic 50.0%
ACACTAAAGGCCCGTTCGTT+TGG + chr4_3:22709606-22709625 None:intergenic 50.0%
ACGGGCCTTTAGTGTGTGTT+TGG - chr4_3:22709611-22709630 Msa0634890:intron 50.0%
!! TTTCAGGCCACTTTGGGACA+TGG - chr4_3:22710196-22710215 Msa0634890:intron 50.0%
TGCAAGGACTCAGTTTGTCC+TGG + chr4_3:22710295-22710314 None:intergenic 50.0%
CGCAGAGATGAATACTCCGA+GGG + chr4_3:22710369-22710388 None:intergenic 50.0%
! CCTCGGAGTATTCATCTCTG+CGG - chr4_3:22710367-22710386 Msa0634890:intron 50.0%
TAGTATTGCCATAGCGGCCA+CGG + chr4_3:22710405-22710424 None:intergenic 50.0%
TGGCCGCTATGGCAATACTA+TGG - chr4_3:22710405-22710424 Msa0634890:intron 50.0%
!! GCAGAGGAAGCATCTTCTGA+TGG - chr4_3:22711383-22711402 Msa0634890:intron 50.0%
!! GAGGAAGCATCTTCTGATGG+CGG - chr4_3:22711386-22711405 Msa0634890:intron 50.0%
!! GCTGAGGAAGAAGTACCACT+TGG - chr4_3:22711439-22711458 Msa0634890:intron 50.0%
CATCATCCGACTCTACCAAG+TGG + chr4_3:22711457-22711476 None:intergenic 50.0%
GACAGTTCCTTCCACTGTTC+CGG - chr4_3:22711896-22711915 Msa0634890:intron 50.0%
CTTCCACTGTTCCGGATGTT+GGG - chr4_3:22711904-22711923 Msa0634890:intron 50.0%
TTCCACTGTTCCGGATGTTG+GGG - chr4_3:22711905-22711924 Msa0634890:intron 50.0%
GGATCGACCAAGTGATCAGA+AGG + chr4_3:22712298-22712317 None:intergenic 50.0%
GCCAAAAATGAACATGGCCC+AGG - chr4_3:22712441-22712460 Msa0634890:CDS 50.0%
!! GGAACTGCCAACTGGTTTGA+AGG + chr4_3:22712754-22712773 None:intergenic 50.0%
CTTCCACTGTTCCGGATGTT+GGG - chr4_3:22711904-22711923 Msa0634890:intron 50.0%
TTCCACTGTTCCGGATGTTG+GGG - chr4_3:22711905-22711924 Msa0634890:intron 50.0%
CGCAGCATTATCTAGATCGG+TGG + chr4_3:22712869-22712888 None:intergenic 50.0%
GAACACAGACGAGGATCTTC+TGG - chr4_3:22712906-22712925 Msa0634890:intron 50.0%
!! ACCACTTGGCTTTTGGCTGT+TGG - chr4_3:22713471-22713490 Msa0634890:intron 50.0%
GACGAATCGTTCCCCATTCA+AGG + chr4_3:22713851-22713870 None:intergenic 50.0%
ACTAACGGAGTCCGCATTCA+GGG + chr4_3:22713731-22713750 None:intergenic 50.0%
GTCCCTGAAATTGACCATGC+AGG - chr4_3:22713790-22713809 Msa0634890:intron 50.0%
GTCCCTGCATGGTCAATTTC+AGG + chr4_3:22713796-22713815 None:intergenic 50.0%
TGACGAATCGTTCCCCATTC+AGG - chr4_3:22713850-22713869 Msa0634890:intron 50.0%
GACGAATCGTTCCCCATTCA+GGG - chr4_3:22713851-22713870 Msa0634890:intron 50.0%
AGGCAGGAAAGCTGAAACCA+CGG - chr4_3:22714589-22714608 Msa0634890:intron 50.0%
CCTTGACCAACCTGTGAAGA+AGG + chr4_3:22714626-22714645 None:intergenic 50.0%
!! CCTTCTTCACAGGTTGGTCA+AGG - chr4_3:22714623-22714642 Msa0634890:intron 50.0%
!! TTCACAGGTTGGTCAAGGAC+AGG - chr4_3:22714628-22714647 Msa0634890:intron 50.0%
TGTGTTCATTTCCCTGAGGC+AGG + chr4_3:22714739-22714758 None:intergenic 50.0%
GGACTCTGCTGTCTCTTTGT+CGG + chr4_3:22715535-22715554 None:intergenic 50.0%
AAAGAGACAGCAGAGTCCGA+TGG - chr4_3:22715537-22715556 Msa0634890:CDS 50.0%
CATACTTATGTGGCAGGGAG+TGG - chr4_3:22716027-22716046 Msa0634890:intron 50.0%
TACTTATGTGGCAGGGAGTG+GGG - chr4_3:22716029-22716048 Msa0634890:intron 50.0%
! TATAGCTGACTCCCCAGAGT+TGG + chr4_3:22716069-22716088 None:intergenic 50.0%
TCTGGGGAGTCAGCTATATG+AGG - chr4_3:22716071-22716090 Msa0634890:intron 50.0%
TATATGAGGACTGAGGGGAG+AGG - chr4_3:22716085-22716104 Msa0634890:intron 50.0%
GAGGGGAGAGGAAGATTATC+TGG - chr4_3:22716097-22716116 Msa0634890:intron 50.0%
GGGGAGAGGAAGATTATCTG+GGG - chr4_3:22716099-22716118 Msa0634890:intron 50.0%
GGTGCTCAAGACAATCCTGA+TGG - chr4_3:22717748-22717767 Msa0634890:intron 50.0%
TGATTCTCAGGCATGCGAGT+TGG - chr4_3:22718433-22718452 Msa0634890:intron 50.0%
TCCATCCAACTGATTGTGGC+TGG - chr4_3:22718682-22718701 Msa0634890:intron 50.0%
ACCAGCCACAATCAGTTGGA+TGG + chr4_3:22718686-22718705 None:intergenic 50.0%
CATGACCAGCCACAATCAGT+TGG + chr4_3:22718690-22718709 None:intergenic 50.0%
CGAAAACCATGTCGAGTCGT+TGG - chr4_3:22718899-22718918 Msa0634890:intron 50.0%
CTTTCACCAACGACTCGACA+TGG + chr4_3:22718908-22718927 None:intergenic 50.0%
! CGAGTCGTTGGTGAAAGTCA+TGG - chr4_3:22718911-22718930 Msa0634890:intron 50.0%
! GTCGTTGGTGAAAGTCATGG+TGG - chr4_3:22718914-22718933 Msa0634890:intron 50.0%
GGAGCAGCCAGAATTGCTTC+TGG + chr4_3:22709874-22709893 None:intergenic 55.0%
TGCAGTGCCATGTCCCAAAG+TGG + chr4_3:22710206-22710225 None:intergenic 55.0%
TTCTTTCCGTCCTTGGCCCT+CGG - chr4_3:22710350-22710369 Msa0634890:intron 55.0%
AATACTCCGAGGGCCAAGGA+CGG + chr4_3:22710359-22710378 None:intergenic 55.0%
GATGAATACTCCGAGGGCCA+AGG + chr4_3:22710363-22710382 None:intergenic 55.0%
CCGCAGAGATGAATACTCCG+AGG + chr4_3:22710370-22710389 None:intergenic 55.0%
TATCTTTCCCGTGGCCGCTA+TGG - chr4_3:22710394-22710413 Msa0634890:intron 55.0%
AGTATTGCCATAGCGGCCAC+GGG + chr4_3:22710404-22710423 None:intergenic 55.0%
! GGCGGACGAAAAAGTGCGAA+AGG - chr4_3:22711404-22711423 Msa0634890:intron 55.0%
GTGCGAAAGGCAGCAGAAGA+CGG - chr4_3:22711417-22711436 Msa0634890:intron 55.0%
CCAACATCCGGAACAGTGGA+AGG + chr4_3:22711906-22711925 None:intergenic 55.0%
CCTTCCACTGTTCCGGATGT+TGG - chr4_3:22711903-22711922 Msa0634890:intron 55.0%
ATCCCCAACATCCGGAACAG+TGG + chr4_3:22711910-22711929 None:intergenic 55.0%
ATACGCGCTTGCTTCCCTCT+TGG - chr4_3:22712204-22712223 Msa0634890:intron 55.0%
GGTCGATCCTTGCACTGTTC+CGG - chr4_3:22712309-22712328 Msa0634890:CDS 55.0%
CCAACATCCGGAACAGTGCA+AGG + chr4_3:22712319-22712338 None:intergenic 55.0%
CCTTGCACTGTTCCGGATGT+TGG - chr4_3:22712316-22712335 Msa0634890:CDS 55.0%
GAACATGGCCCAGGATCTCT+TGG - chr4_3:22712450-22712469 Msa0634890:CDS 55.0%
CAGTGGAAGGAACTGCCAAC+TGG + chr4_3:22712762-22712781 None:intergenic 55.0%
GGCAGTTCCTTCCACTGTTC+CGG - chr4_3:22712765-22712784 Msa0634890:intron 55.0%
CCAACATCCGGAACAGTGGA+AGG + chr4_3:22711906-22711925 None:intergenic 55.0%
CCTTCCACTGTTCCGGATGT+TGG - chr4_3:22711903-22711922 Msa0634890:intron 55.0%
ATCCCCAACATCCGGAACAG+TGG + chr4_3:22711910-22711929 None:intergenic 55.0%
ACAGACGAGGATCTTCTGGC+AGG - chr4_3:22712910-22712929 Msa0634890:intron 55.0%
GCCAACAGCCAAAAGCCAAG+TGG + chr4_3:22713475-22713494 None:intergenic 55.0%
! TGGTGAGATGGTGGCATGTC+TGG - chr4_3:22713534-22713553 Msa0634890:intron 55.0%
! ATGGTGGCATGTCTGGCTCA+TGG - chr4_3:22713541-22713560 Msa0634890:intron 55.0%
GACTAACGGAGTCCGCATTC+AGG + chr4_3:22713732-22713751 None:intergenic 55.0%
!! GTTTTGTGGGCGTCGTCTCT+CGG - chr4_3:22713973-22713992 Msa0634890:intron 55.0%
ACTTATGTGGCAGGGAGTGG+GGG - chr4_3:22716030-22716049 Msa0634890:intron 55.0%
TGGTGCAGCAGTGTGGACAA+TGG - chr4_3:22717727-22717746 Msa0634890:intron 55.0%
AAGGCAGCAGAAGACGGCTG+AGG - chr4_3:22711423-22711442 Msa0634890:intron 60.0%
GGCCCAGGATCTCTTGGATC+AGG - chr4_3:22712456-22712475 Msa0634890:CDS 60.0%
! GTGGCATGTCTGGCTCATGG+TGG - chr4_3:22713544-22713563 Msa0634890:intron 60.0%
! GCATGTCTGGCTCATGGTGG+CGG - chr4_3:22713547-22713566 Msa0634890:intron 60.0%
TCTGTAGGAGCTCGGCTCTG+TGG - chr4_3:22716159-22716178 Msa0634890:five_prime_UTR 60.0%
CTGTAGGAGCTCGGCTCTGT+GGG - chr4_3:22716160-22716179 Msa0634890:five_prime_UTR 60.0%
! GTGGGCGTCGTCTCTCGGAT+TGG - chr4_3:22713978-22713997 Msa0634890:intron 65.0%
AGCTCGGCTCTGTGGGCCTT+AGG - chr4_3:22716167-22716186 Msa0634890:five_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 22708847 22719047 22708847 ID=Msa0634890;Name=Msa0634890
chr4_3 mRNA 22708847 22719047 22708847 ID=Msa0634890-mRNA-1;Parent=Msa0634890;Name=Msa0634890-mRNA-1;_AED=0.14;_eAED=0.14;_QI=1056|1|1|1|0.8|0.68|16|370|536
chr4_3 exon 22708847 22709298 22708847 ID=Msa0634890-mRNA-1:exon:5927;Parent=Msa0634890-mRNA-1
chr4_3 exon 22709403 22709451 22709403 ID=Msa0634890-mRNA-1:exon:5926;Parent=Msa0634890-mRNA-1
chr4_3 exon 22709551 22709592 22709551 ID=Msa0634890-mRNA-1:exon:5925;Parent=Msa0634890-mRNA-1
chr4_3 exon 22709680 22709767 22709680 ID=Msa0634890-mRNA-1:exon:5924;Parent=Msa0634890-mRNA-1
chr4_3 exon 22709883 22710156 22709883 ID=Msa0634890-mRNA-1:exon:5923;Parent=Msa0634890-mRNA-1
chr4_3 exon 22712278 22712517 22712278 ID=Msa0634890-mRNA-1:exon:5922;Parent=Msa0634890-mRNA-1
chr4_3 exon 22713114 22713299 22713114 ID=Msa0634890-mRNA-1:exon:5921;Parent=Msa0634890-mRNA-1
chr4_3 exon 22714929 22715156 22714929 ID=Msa0634890-mRNA-1:exon:5920;Parent=Msa0634890-mRNA-1
chr4_3 exon 22715289 22715478 22715289 ID=Msa0634890-mRNA-1:exon:5919;Parent=Msa0634890-mRNA-1
chr4_3 exon 22715502 22715612 22715502 ID=Msa0634890-mRNA-1:exon:5918;Parent=Msa0634890-mRNA-1
chr4_3 exon 22715723 22716022 22715723 ID=Msa0634890-mRNA-1:exon:5917;Parent=Msa0634890-mRNA-1
chr4_3 exon 22716156 22716507 22716156 ID=Msa0634890-mRNA-1:exon:5916;Parent=Msa0634890-mRNA-1
chr4_3 exon 22716605 22716741 22716605 ID=Msa0634890-mRNA-1:exon:5915;Parent=Msa0634890-mRNA-1
chr4_3 exon 22717460 22717692 22717460 ID=Msa0634890-mRNA-1:exon:5914;Parent=Msa0634890-mRNA-1
chr4_3 exon 22718797 22718870 22718797 ID=Msa0634890-mRNA-1:exon:5913;Parent=Msa0634890-mRNA-1
chr4_3 exon 22718967 22719047 22718967 ID=Msa0634890-mRNA-1:exon:5912;Parent=Msa0634890-mRNA-1
chr4_3 five_prime_UTR 22718967 22719047 22718967 ID=Msa0634890-mRNA-1:five_prime_utr;Parent=Msa0634890-mRNA-1
chr4_3 five_prime_UTR 22718797 22718870 22718797 ID=Msa0634890-mRNA-1:five_prime_utr;Parent=Msa0634890-mRNA-1
chr4_3 five_prime_UTR 22717460 22717692 22717460 ID=Msa0634890-mRNA-1:five_prime_utr;Parent=Msa0634890-mRNA-1
chr4_3 five_prime_UTR 22716605 22716741 22716605 ID=Msa0634890-mRNA-1:five_prime_utr;Parent=Msa0634890-mRNA-1
chr4_3 five_prime_UTR 22716156 22716507 22716156 ID=Msa0634890-mRNA-1:five_prime_utr;Parent=Msa0634890-mRNA-1
chr4_3 five_prime_UTR 22715844 22716022 22715844 ID=Msa0634890-mRNA-1:five_prime_utr;Parent=Msa0634890-mRNA-1
chr4_3 CDS 22715723 22715843 22715723 ID=Msa0634890-mRNA-1:cds;Parent=Msa0634890-mRNA-1
chr4_3 CDS 22715502 22715612 22715502 ID=Msa0634890-mRNA-1:cds;Parent=Msa0634890-mRNA-1
chr4_3 CDS 22715289 22715478 22715289 ID=Msa0634890-mRNA-1:cds;Parent=Msa0634890-mRNA-1
chr4_3 CDS 22714929 22715156 22714929 ID=Msa0634890-mRNA-1:cds;Parent=Msa0634890-mRNA-1
chr4_3 CDS 22713114 22713299 22713114 ID=Msa0634890-mRNA-1:cds;Parent=Msa0634890-mRNA-1
chr4_3 CDS 22712278 22712517 22712278 ID=Msa0634890-mRNA-1:cds;Parent=Msa0634890-mRNA-1
chr4_3 CDS 22709883 22710156 22709883 ID=Msa0634890-mRNA-1:cds;Parent=Msa0634890-mRNA-1
chr4_3 CDS 22709680 22709767 22709680 ID=Msa0634890-mRNA-1:cds;Parent=Msa0634890-mRNA-1
chr4_3 CDS 22709551 22709592 22709551 ID=Msa0634890-mRNA-1:cds;Parent=Msa0634890-mRNA-1
chr4_3 CDS 22709403 22709451 22709403 ID=Msa0634890-mRNA-1:cds;Parent=Msa0634890-mRNA-1
chr4_3 CDS 22709217 22709298 22709217 ID=Msa0634890-mRNA-1:cds;Parent=Msa0634890-mRNA-1
chr4_3 three_prime_UTR 22708847 22709216 22708847 ID=Msa0634890-mRNA-1:three_prime_utr;Parent=Msa0634890-mRNA-1
Gene Sequence

>Msa0634890

ATGATAATATTGACAGAGAAACAGTTGATGCTGGCAAAAAAGACGGTGAAGACCATGAGAATAGTGCTACTGAAACAAAATTGGAAACTGACAATGCTGTTGCAGATAGTCAGACTCACAGCAAGGAAGCTGAACCTTCTGATCACTTGGTCGATCCTTGCACTGTTCCGGATGTTGGAGATATTAAAAAGTCAAAAAAGAAAAAGAAGGGAAAGGAAAAAGAAACCAAGAGAACTAGATAATGCTGCACAAGATGAGCCAAAAATGAACATGGCCCAGGATCTCTTGGATCAGGAAATGGTTGATAATGTTGACAAAGAAGCAGTTGATGATGGCAAAAAAGACGGTGAAGACTGTGAGAATATTACTATTGAAACAAAATTGAAAACTGACAATGTTGTCGCAGATATTCAAACTCATAGCAGGGAAGCTGAACCTTCAAACCAGTTGGCAGTTCCTTCCACTGTTCCGGATGTTGGGGATATGAAAAAGTCAAAAAAGAAAAAGAAGGGAAAGGAAAAAGAAACCAAGAGCTCTGGTAATGAACATTCCACCGATCTAGATAATGCTGCGCAAGATGAGCCAAAAATGAACACAGACGAGGATCTTCTGGCAGGAAATGAACAGAACCAGCAGCAACCTAATGATAAGAAAGCTGAAACCACGGATAAAATACTACCTTCTTCACAGGTTGGTCAAGGACAGGATGAAAAACCAAAGAAAAAAAGGAAGGAGCGGTCAAAGGTGACACTTTTTATTGCTGATGATGCTTGTATTAGCAATGTTGTTAACCTGCCTCAGGGAAATGAACACAGTAATCAGGACACAGTTAATGGAAGGGATGTTAAGATTGCAGACAGTGTTGCATTGCCTTCCTCTGAGACAGATTCTCAAAAGAAAACAAAGAGGAGAAAGAAAGAACAAATAAACAAAGCTTCACATCCTGAAGGTGACAACAGAAATGGAGAAGGTATCATTCAAGATTACAAAGCCGACAAAGAGACAGCAGAGTCCGATGGTCTGAGTGATAAGTTTTCTGAAAAGAAAGAGCAACATCCGAAGCTAACAATTGAAAATGTGGACAATGGTGCTCAAGACAATCCTGATGGAAATCAATCCGAAGATAAGAAAGTTAAGAAAAAGAAGAAGAAAAGTAAAAGTCAGGGCAGTGAAGTTGTAAACTCTGATGTGCCTGTATCGGTTGAGCAAAGTACTGAGATGATGGAAGAGGATGGAAATAATGTGGAGGATACAAAGCCTTCCCAAGTTCGAACATTGTCAAATGGACTAGTTATTCAAGAGCTTGAGACAGGGAAAGAAAATGGGAAAATTGCTGCAGTAGGGAAAAAGATCAGCATCAATTACACTGGCAAGTTGAAGGAAAATGGGGTGGTGATTGAATCAAATGCTGGCGAAGCTCCTTTCAAATTTCGCCTTGGTAAAGGAGAAGTTATTGAGGGTTGGGATATTGGTCTTGAAGGCATGCGAGTTGGAGAAAAGAGAAGACTTGTTGTTCCACCATCAATGACGTCTAAGAAGGACGGTGAAAGTGAAAACATACCACCAAATTCATGGTTGGTTTATGACTTTGAACTGGTTAAAGTTCATTGA
Protein sequence

>Msa0634890

MIILTEKQLMLAKKTVKTMRIVLLKQNWKLTMLLQIVRLTARKLNLLITWSILALFRMLEILKSQKRKRRERKKKPRELDNAAQDEPKMNMAQDLLDQEMVDNVDKEAVDDGKKDGEDCENITIETKLKTDNVVADIQTHSREAEPSNQLAVPSTVPDVGDMKKSKKKKKGKEKETKSSGNEHSTDLDNAAQDEPKMNTDEDLLAGNEQNQQQPNDKKAETTDKILPSSQVGQGQDEKPKKKRKERSKVTLFIADDACISNVVNLPQGNEHSNQDTVNGRDVKIADSVALPSSETDSQKKTKRRKKEQINKASHPEGDNRNGEGIIQDYKADKETAESDGLSDKFSEKKEQHPKLTIENVDNGAQDNPDGNQSEDKKVKKKKKKSKSQGSEVVNSDVPVSVEQSTEMMEEDGNNVEDTKPSQVRTLSNGLVIQELETGKENGKIAAVGKKISINYTGKLKENGVVIESNAGEAPFKFRLGKGEVIEGWDIGLEGMRVGEKRRLVVPPSMTSKKDGESENIPPNSWLVYDFELVKVH*