Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0936480 | sp|Q8L970|P4H7_ARATH | 56.825 | 315 | 89 | 4 | 6 | 277 | 6 | 316 | 5.74e-124 | 358 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0936480 | B7FKS2 | 83.492 | 315 | 12 | 4 | 1 | 277 | 1 | 313 | 0.0 | 510 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008200 | Msa0936480 | 0.825744 | 3.966907e-54 | -8.615850e-47 |
| Msa0010490 | Msa0936480 | 0.821415 | 4.087359e-53 | -8.615850e-47 |
| Msa0010500 | Msa0936480 | 0.819082 | 1.399760e-52 | -8.615850e-47 |
| Msa0020390 | Msa0936480 | 0.807094 | 5.979564e-50 | -8.615850e-47 |
| Msa0024400 | Msa0936480 | 0.807445 | 5.038036e-50 | -8.615850e-47 |
| Msa0027890 | Msa0936480 | 0.800151 | 1.648504e-48 | -8.615850e-47 |
| Msa0038870 | Msa0936480 | 0.804074 | 2.572420e-49 | -8.615850e-47 |
| Msa0068020 | Msa0936480 | 0.820582 | 6.356940e-53 | -8.615850e-47 |
| Msa0072420 | Msa0936480 | 0.812248 | 4.663528e-51 | -8.615850e-47 |
| Msa0090520 | Msa0936480 | 0.833251 | 5.935628e-56 | -8.615850e-47 |
| Msa0090550 | Msa0936480 | 0.810687 | 1.018533e-50 | -8.615850e-47 |
| Msa0091610 | Msa0936480 | 0.816160 | 6.381934e-52 | -8.615850e-47 |
| Msa0604290 | Msa0936480 | 0.825520 | 4.483309e-54 | -8.615850e-47 |
| Msa0610550 | Msa0936480 | 0.815464 | 9.122710e-52 | -8.615850e-47 |
| Msa0634890 | Msa0936480 | 0.840467 | 8.543136e-58 | -8.615850e-47 |
| Msa0665280 | Msa0936480 | 0.800839 | 1.194007e-48 | -8.615850e-47 |
| Msa0672100 | Msa0936480 | 0.805333 | 1.404565e-49 | -8.615850e-47 |
| Msa0677530 | Msa0936480 | 0.815017 | 1.146817e-51 | -8.615850e-47 |
| Msa0682680 | Msa0936480 | 0.808899 | 2.468879e-50 | -8.615850e-47 |
| Msa0689440 | Msa0936480 | 0.828450 | 8.930943e-55 | -8.615850e-47 |
| Msa0693210 | Msa0936480 | 0.833174 | 6.206718e-56 | -8.615850e-47 |
| Msa0741440 | Msa0936480 | 0.824935 | 6.164961e-54 | -8.615850e-47 |
| Msa0752700 | Msa0936480 | 0.805488 | 1.302976e-49 | -8.615850e-47 |
| Msa0786750 | Msa0936480 | 0.816766 | 4.668565e-52 | -8.615850e-47 |
| Msa0794970 | Msa0936480 | 0.811942 | 5.438113e-51 | -8.615850e-47 |
| Msa0822500 | Msa0936480 | 0.825180 | 5.395969e-54 | -8.615850e-47 |
| Msa0828590 | Msa0936480 | 0.803582 | 3.253625e-49 | -8.615850e-47 |
| Msa0829220 | Msa0936480 | 0.806850 | 6.731989e-50 | -8.615850e-47 |
| Msa0831100 | Msa0936480 | 0.811641 | 6.323599e-51 | -8.615850e-47 |
| Msa0838370 | Msa0936480 | 0.802474 | 5.514698e-49 | -8.615850e-47 |
| Msa0136120 | Msa0936480 | 0.825378 | 4.843389e-54 | -8.615850e-47 |
| Msa0137990 | Msa0936480 | 0.830671 | 2.574804e-55 | -8.615850e-47 |
| Msa0149440 | Msa0936480 | 0.817209 | 3.713236e-52 | -8.615850e-47 |
| Msa0163510 | Msa0936480 | 0.807683 | 4.483305e-50 | -8.615850e-47 |
| Msa0167980 | Msa0936480 | 0.819075 | 1.405038e-52 | -8.615850e-47 |
| Msa0177960 | Msa0936480 | 0.823080 | 1.679085e-53 | -8.615850e-47 |
| Msa0183870 | Msa0936480 | 0.804613 | 1.985684e-49 | -8.615850e-47 |
| Msa0183900 | Msa0936480 | 0.832778 | 7.784898e-56 | -8.615850e-47 |
| Msa0190590 | Msa0936480 | 0.816161 | 6.377799e-52 | -8.615850e-47 |
| Msa0204960 | Msa0936480 | 0.834295 | 3.256297e-56 | -8.615850e-47 |
| Msa0215990 | Msa0936480 | 0.804967 | 1.675410e-49 | -8.615850e-47 |
| Msa0217670 | Msa0936480 | 0.835456 | 1.660107e-56 | -8.615850e-47 |
| Msa0232790 | Msa0936480 | 0.810743 | 9.901899e-51 | -8.615850e-47 |
| Msa0376630 | Msa0936480 | 0.803818 | 2.907697e-49 | -8.615850e-47 |
| Msa0377820 | Msa0936480 | 0.838568 | 2.661936e-57 | -8.615850e-47 |
| Msa0385500 | Msa0936480 | 0.862957 | 3.505689e-64 | -8.615850e-47 |
| Msa0389510 | Msa0936480 | 0.810304 | 1.232163e-50 | -8.615850e-47 |
| Msa0419720 | Msa0936480 | 0.807952 | 3.930205e-50 | -8.615850e-47 |
| Msa0426580 | Msa0936480 | 0.813402 | 2.606485e-51 | -8.615850e-47 |
| Msa0460740 | Msa0936480 | 0.801924 | 7.155627e-49 | -8.615850e-47 |
| Msa0462600 | Msa0936480 | 0.817091 | 3.947928e-52 | -8.615850e-47 |
| Msa0472930 | Msa0936480 | 0.825475 | 4.593979e-54 | -8.615850e-47 |
| Msa0244980 | Msa0936480 | 0.829199 | 5.882436e-55 | -8.615850e-47 |
| Msa0249580 | Msa0936480 | 0.807141 | 5.843460e-50 | -8.615850e-47 |
| Msa0256140 | Msa0936480 | 0.805700 | 1.176346e-49 | -8.615850e-47 |
| Msa0257330 | Msa0936480 | -0.807734 | 4.374166e-50 | -8.615850e-47 |
| Msa0257490 | Msa0936480 | 0.835273 | 1.847543e-56 | -8.615850e-47 |
| Msa0267920 | Msa0936480 | 0.805463 | 1.318627e-49 | -8.615850e-47 |
| Msa0275360 | Msa0936480 | 0.800147 | 1.651861e-48 | -8.615850e-47 |
| Msa0281530 | Msa0936480 | 0.844177 | 8.884055e-59 | -8.615850e-47 |
| Msa0283420 | Msa0936480 | 0.810836 | 9.455626e-51 | -8.615850e-47 |
| Msa0296630 | Msa0936480 | -0.804681 | 1.922419e-49 | -8.615850e-47 |
| Msa0296790 | Msa0936480 | 0.845920 | 3.005969e-59 | -8.615850e-47 |
| Msa0319640 | Msa0936480 | 0.803747 | 3.006973e-49 | -8.615850e-47 |
| Msa0320590 | Msa0936480 | 0.817237 | 3.660330e-52 | -8.615850e-47 |
| Msa0321690 | Msa0936480 | 0.811527 | 6.696978e-51 | -8.615850e-47 |
| Msa0339910 | Msa0936480 | 0.805518 | 1.284484e-49 | -8.615850e-47 |
| Msa0363640 | Msa0936480 | 0.806891 | 6.601199e-50 | -8.615850e-47 |
| Msa0484740 | Msa0936480 | 0.817264 | 3.608170e-52 | -8.615850e-47 |
| Msa0491000 | Msa0936480 | 0.801470 | 8.870294e-49 | -8.615850e-47 |
| Msa0517590 | Msa0936480 | 0.810147 | 1.331926e-50 | -8.615850e-47 |
| Msa0527540 | Msa0936480 | 0.808893 | 2.475782e-50 | -8.615850e-47 |
| Msa0539410 | Msa0936480 | 0.813469 | 2.519764e-51 | -8.615850e-47 |
| Msa0542290 | Msa0936480 | 0.832887 | 7.312154e-56 | -8.615850e-47 |
| Msa0542560 | Msa0936480 | 0.824674 | 7.102493e-54 | -8.615850e-47 |
| Msa0547160 | Msa0936480 | 0.831155 | 1.959788e-55 | -8.615850e-47 |
| Msa0549450 | Msa0936480 | 0.802695 | 4.965209e-49 | -8.615850e-47 |
| Msa0580230 | Msa0936480 | 0.812464 | 4.183530e-51 | -8.615850e-47 |
| Msa0580280 | Msa0936480 | 0.806884 | 6.621468e-50 | -8.615850e-47 |
| Msa0581110 | Msa0936480 | 0.801514 | 8.685099e-49 | -8.615850e-47 |
| Msa0870750 | Msa0936480 | 0.921191 | 4.905780e-88 | -8.615850e-47 |
| Msa0903870 | Msa0936480 | 0.911186 | 8.083437e-83 | -8.615850e-47 |
| Msa0936480 | Msa0944200 | 0.832369 | 9.830089e-56 | -8.615850e-47 |
| Msa0936480 | Msa0958000 | 0.819691 | 1.016968e-52 | -8.615850e-47 |
| Msa0936480 | Msa0973420 | 0.910557 | 1.639105e-82 | -8.615850e-47 |
| Msa0936480 | Msa0980540 | 0.838543 | 2.702095e-57 | -8.615850e-47 |
| Msa0936480 | Msa1037520 | 0.802894 | 4.516991e-49 | -8.615850e-47 |
| Msa0936480 | Msa1041850 | 0.801479 | 8.833470e-49 | -8.615850e-47 |
| Msa0936480 | Msa1126830 | 0.802681 | 4.998002e-49 | -8.615850e-47 |
| Msa0936480 | Msa1165780 | 0.801259 | 9.795183e-49 | -8.615850e-47 |
| Msa0936480 | Msa1228040 | 0.805226 | 1.478542e-49 | -8.615850e-47 |
| Msa0936480 | Msa1233850 | 0.812193 | 4.795204e-51 | -8.615850e-47 |
| Msa0936480 | Msa1276150 | 0.801999 | 6.908404e-49 | -8.615850e-47 |
| Msa0936480 | Msa1307180 | 0.836489 | 9.081038e-57 | -8.615850e-47 |
| Msa0936480 | Msa1315890 | 0.813154 | 2.954891e-51 | -8.615850e-47 |
| Msa0936480 | Msa1316360 | 0.819968 | 8.786806e-53 | -8.615850e-47 |
| Msa0936480 | Msa1327640 | 0.806485 | 8.040248e-50 | -8.615850e-47 |
| Msa0936480 | Msa1362420 | 0.814900 | 1.217098e-51 | -8.615850e-47 |
| Msa0936480 | Msa1365800 | 0.812436 | 4.244111e-51 | -8.615850e-47 |
| Msa0936480 | Msa1368530 | 0.817090 | 3.949686e-52 | -8.615850e-47 |
| Msa0936480 | Msa1458290 | 0.829733 | 4.364625e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0936480 | MtrunA17_Chr6g0452281 | 83.492 | 315 | 12 | 4 | 1 | 277 | 1 | 313 | 0.0 | 510 |
| Msa0936480 | MtrunA17_Chr2g0286811 | 53.901 | 282 | 86 | 3 | 34 | 275 | 26 | 303 | 2.67e-103 | 303 |
| Msa0936480 | MtrunA17_Chr4g0066531 | 52.768 | 271 | 86 | 3 | 43 | 275 | 32 | 298 | 6.54e-97 | 286 |
| Msa0936480 | MtrunA17_Chr3g0143381 | 45.276 | 254 | 102 | 3 | 6 | 222 | 26 | 279 | 8.57e-71 | 219 |
| Msa0936480 | MtrunA17_Chr5g0406051 | 48.341 | 211 | 73 | 2 | 48 | 222 | 78 | 288 | 9.03e-66 | 207 |
| Msa0936480 | MtrunA17_Chr6g0470551 | 38.411 | 302 | 147 | 6 | 6 | 275 | 3 | 297 | 2.12e-65 | 206 |
| Msa0936480 | MtrunA17_Chr8g0371281 | 46.218 | 238 | 88 | 4 | 21 | 221 | 41 | 275 | 3.51e-65 | 205 |
| Msa0936480 | MtrunA17_Chr8g0371221 | 46.218 | 238 | 89 | 4 | 21 | 221 | 41 | 276 | 4.25e-64 | 202 |
| Msa0936480 | MtrunA17_Chr8g0371251 | 43.697 | 238 | 98 | 2 | 21 | 222 | 41 | 278 | 5.11e-63 | 199 |
| Msa0936480 | MtrunA17_Chr8g0371231 | 53.793 | 145 | 66 | 1 | 76 | 219 | 55 | 199 | 1.53e-51 | 167 |
| Msa0936480 | MtrunA17_Chr3g0143361 | 54.545 | 143 | 60 | 1 | 76 | 218 | 32 | 169 | 2.60e-49 | 162 |
| Msa0936480 | MtrunA17_Chr8g0371241 | 51.724 | 145 | 53 | 2 | 76 | 219 | 31 | 159 | 1.04e-43 | 146 |
| Msa0936480 | MtrunA17_Chr1g0213811 | 40.865 | 208 | 71 | 4 | 51 | 216 | 78 | 275 | 3.14e-43 | 148 |
| Msa0936480 | MtrunA17_Chr4g0053801 | 35.043 | 234 | 109 | 4 | 27 | 222 | 66 | 294 | 7.36e-39 | 137 |
| Msa0936480 | MtrunA17_Chr3g0143371 | 50.794 | 126 | 56 | 2 | 76 | 200 | 32 | 152 | 3.67e-35 | 124 |
| Msa0936480 | MtrunA17_Chr3g0143351 | 46.667 | 150 | 68 | 3 | 76 | 222 | 32 | 172 | 7.51e-35 | 124 |
| Msa0936480 | MtrunA17_Chr5g0401481 | 33.182 | 220 | 90 | 4 | 51 | 216 | 86 | 302 | 9.41e-32 | 119 |
| Msa0936480 | MtrunA17_Chr3g0098671 | 55.738 | 61 | 22 | 2 | 95 | 153 | 31 | 88 | 2.95e-15 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0936480 | AT3G28480.1 | 56.825 | 315 | 89 | 4 | 6 | 277 | 6 | 316 | 5.83e-125 | 358 |
| Msa0936480 | AT3G28480.2 | 55.418 | 323 | 89 | 4 | 6 | 277 | 6 | 324 | 9.06e-124 | 356 |
| Msa0936480 | AT3G28490.1 | 58.582 | 268 | 68 | 2 | 44 | 275 | 28 | 288 | 4.10e-112 | 325 |
| Msa0936480 | AT5G18900.1 | 52.015 | 273 | 89 | 3 | 41 | 275 | 30 | 298 | 1.79e-94 | 281 |
| Msa0936480 | AT3G06300.1 | 53.184 | 267 | 83 | 3 | 47 | 275 | 37 | 299 | 1.36e-93 | 278 |
| Msa0936480 | AT4G25600.1 | 45.946 | 259 | 106 | 7 | 36 | 275 | 48 | 291 | 5.93e-72 | 223 |
| Msa0936480 | AT1G20270.1 | 49.519 | 208 | 69 | 2 | 51 | 222 | 79 | 286 | 7.64e-65 | 204 |
| Msa0936480 | AT2G17720.1 | 47.867 | 211 | 74 | 2 | 48 | 222 | 80 | 290 | 2.80e-63 | 201 |
| Msa0936480 | AT4G25600.3 | 44.351 | 239 | 100 | 6 | 56 | 275 | 6 | 230 | 3.21e-63 | 199 |
| Msa0936480 | AT4G25600.2 | 44.351 | 239 | 100 | 6 | 56 | 275 | 15 | 239 | 3.73e-63 | 199 |
| Msa0936480 | AT4G35810.1 | 49.275 | 207 | 69 | 2 | 51 | 221 | 83 | 289 | 3.76e-63 | 200 |
| Msa0936480 | AT4G35810.2 | 49.275 | 207 | 69 | 2 | 51 | 221 | 83 | 289 | 3.76e-63 | 200 |
| Msa0936480 | AT4G25600.4 | 44.351 | 239 | 100 | 6 | 56 | 275 | 3 | 227 | 3.97e-63 | 198 |
| Msa0936480 | AT5G66060.1 | 48.341 | 211 | 73 | 2 | 48 | 222 | 78 | 288 | 8.05e-62 | 197 |
| Msa0936480 | AT2G43080.1 | 39.216 | 204 | 82 | 2 | 51 | 217 | 80 | 278 | 2.23e-41 | 144 |
| Msa0936480 | AT2G23096.1 | 38.806 | 201 | 85 | 4 | 51 | 216 | 71 | 268 | 1.04e-40 | 142 |
| Msa0936480 | AT4G33910.1 | 35.714 | 238 | 110 | 4 | 24 | 223 | 56 | 288 | 4.52e-40 | 141 |
| Msa0936480 | AT4G35820.1 | 40.933 | 193 | 50 | 4 | 51 | 200 | 91 | 262 | 7.35e-38 | 134 |
| Msa0936480 | AT5G66060.2 | 44.444 | 162 | 52 | 3 | 48 | 173 | 78 | 237 | 9.46e-36 | 128 |
| Msa0936480 | AT1G20270.2 | 43.089 | 123 | 35 | 1 | 51 | 138 | 79 | 201 | 6.51e-28 | 107 |
| Msa0936480 | AT1G20270.3 | 43.089 | 123 | 35 | 1 | 51 | 138 | 79 | 201 | 6.51e-28 | 107 |
Find 64 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGTTAATTAAATGTTAAT+TGG | 0.206561 | 6_3:+7221758 | None:intergenic |
| CTTTAGGATGAAATAGTTTC+TGG | 0.221539 | 6_3:-7218485 | Msa0936480:intron |
| TCTGACCAGCTCTCATCTTT+TGG | 0.243925 | 6_3:+7218046 | None:intergenic |
| GTTGGTAATGGAGGAGTTAA+AGG | 0.311233 | 6_3:-7217113 | Msa0936480:CDS |
| TTCAATTCGATTACCTGGTT+TGG | 0.335287 | 6_3:-7221554 | Msa0936480:CDS |
| ATGTGATCATCTTATTGAAT+TGG | 0.366986 | 6_3:-7221194 | Msa0936480:intron |
| GATTCCCACAGATTTGAGTT+TGG | 0.395465 | 6_3:+7221806 | None:intergenic |
| GAGATTTATTTGTAAAGGAA+AGG | 0.436384 | 6_3:+7216935 | None:intergenic |
| AATAAGAGAGATTAGAGAGA+GGG | 0.438010 | 6_3:+7221706 | None:intergenic |
| TCCTCCAATGCTTGTCGTAT+CGG | 0.438442 | 6_3:+7217218 | None:intergenic |
| AAGGAGAGATTTATTTGTAA+AGG | 0.449994 | 6_3:+7216930 | None:intergenic |
| CCACGTTATATGGTTGGTAA+TGG | 0.471479 | 6_3:-7217125 | Msa0936480:CDS |
| AGACATTTGTTAAATGTGAA+AGG | 0.472931 | 6_3:+7216911 | None:intergenic |
| GTTTCTTCAATTCGATTACC+TGG | 0.477062 | 6_3:-7221559 | Msa0936480:CDS |
| CACTTCTCACCTTCAATCAC+TGG | 0.491510 | 6_3:+7217281 | None:intergenic |
| AGATTTATTTGTAAAGGAAA+GGG | 0.496125 | 6_3:+7216936 | None:intergenic |
| TCTTCTTAGAGAGGTTATCA+TGG | 0.503180 | 6_3:-7217062 | Msa0936480:exon |
| CTCAGCTCTCGTGGAGTCCT+AGG | 0.504470 | 6_3:-7221357 | Msa0936480:intron |
| CGACAAGCATTGGAGGATGA+TGG | 0.516551 | 6_3:-7217212 | Msa0936480:CDS |
| TGTGCTCACAAAGGATATGC+AGG | 0.524271 | 6_3:-7218022 | Msa0936480:intron |
| CGCAGCCAAAAGATGAGAGC+TGG | 0.529876 | 6_3:-7218051 | Msa0936480:CDS |
| TTGTCTAATGTTGAGAAGGG+TGG | 0.535297 | 6_3:-7218209 | Msa0936480:CDS |
| AAGAAAGGAGTTCTCCTCTA+GGG | 0.542203 | 6_3:-7216965 | Msa0936480:three_prime_UTR |
| AACTGAATAGAAATGAAGAA+AGG | 0.546047 | 6_3:-7216980 | Msa0936480:three_prime_UTR |
| GAAGAAAGGAGTTCTCCTCT+AGG | 0.547386 | 6_3:-7216966 | Msa0936480:three_prime_UTR |
| AAATAAGAGAGATTAGAGAG+AGG | 0.547974 | 6_3:+7221705 | None:intergenic |
| ACCGATACGACAAGCATTGG+AGG | 0.549713 | 6_3:-7217219 | Msa0936480:CDS |
| TGTGCTAGGTGGGCTAAAGT+TGG | 0.553043 | 6_3:-7217164 | Msa0936480:CDS |
| ACAATGGAAGAAAACGAGGT+TGG | 0.559292 | 6_3:+7221602 | None:intergenic |
| GAAACCGATACGACAAGCAT+TGG | 0.562936 | 6_3:-7217222 | Msa0936480:CDS |
| GTCGTTGATTAGCCTTGTCG+TGG | 0.563771 | 6_3:+7218267 | None:intergenic |
| TCGTATCGGTTTCTCAAAGT+CGG | 0.564192 | 6_3:+7217232 | None:intergenic |
| GGAAGCTGTCCAGTGATTGA+AGG | 0.566220 | 6_3:-7217290 | Msa0936480:CDS |
| AATGTTTGCTCTTCTTAGAG+AGG | 0.567861 | 6_3:-7217071 | Msa0936480:exon |
| CGTTATATGGTTGGTAATGG+AGG | 0.570195 | 6_3:-7217122 | Msa0936480:CDS |
| GATTTCAGTAAAACCTCGGA+AGG | 0.570685 | 6_3:-7217375 | Msa0936480:intron |
| CACGTGTTACTCAGCTCTCG+TGG | 0.573617 | 6_3:-7221366 | Msa0936480:CDS |
| AAGGCTAATCAACGACTTGG+CGG | 0.579353 | 6_3:-7218260 | Msa0936480:CDS |
| CTGTGATTTCAGTAAAACCT+CGG | 0.587062 | 6_3:-7217379 | Msa0936480:intron |
| GACAAGGCTAATCAACGACT+TGG | 0.590163 | 6_3:-7218263 | Msa0936480:CDS |
| CAAGTATTGCACTACATGAA+CGG | 0.597351 | 6_3:-7218320 | Msa0936480:CDS |
| TGGCGGCCATCGTGTTGCAA+CGG | 0.600471 | 6_3:-7218243 | Msa0936480:CDS |
| GTATTTGTCTAATGTTGAGA+AGG | 0.600995 | 6_3:-7218213 | Msa0936480:CDS |
| AACAAGGCGTCACCCTTCCG+AGG | 0.602551 | 6_3:+7217362 | None:intergenic |
| AGACGCCAAACTCAAATCTG+TGG | 0.603988 | 6_3:-7221811 | Msa0936480:five_prime_UTR |
| GACGCCAAACTCAAATCTGT+GGG | 0.606114 | 6_3:-7221810 | Msa0936480:five_prime_UTR |
| TATTTGTCTAATGTTGAGAA+GGG | 0.614235 | 6_3:-7218212 | Msa0936480:CDS |
| GAATGAGAATTGTGCTAGGT+GGG | 0.627537 | 6_3:-7217174 | Msa0936480:CDS |
| ATGAGAATGAGAATTGTGCT+AGG | 0.631627 | 6_3:-7217178 | Msa0936480:CDS |
| AGAAGTGGTCAGCAACAAAG+TGG | 0.631807 | 6_3:-7217265 | Msa0936480:CDS |
| CCATTACCAACCATATAACG+TGG | 0.638057 | 6_3:+7217125 | None:intergenic |
| GAAAGTCTTACCTCGGCATG+AGG | 0.646247 | 6_3:+7218173 | None:intergenic |
| TTGAAGCACGAATTGCCGCA+TGG | 0.649902 | 6_3:-7218460 | Msa0936480:CDS |
| TCGTGGAAGAAATCAAAATG+TGG | 0.654542 | 6_3:+7218284 | None:intergenic |
| AGAATGAGAATTGTGCTAGG+TGG | 0.675466 | 6_3:-7217175 | Msa0936480:CDS |
| TGGTCAGAATGTGCTCACAA+AGG | 0.676168 | 6_3:-7218031 | Msa0936480:CDS |
| CAGTGATTGAAGGTGAGAAG+TGG | 0.688855 | 6_3:-7217280 | Msa0936480:CDS |
| AGTAACAATGGAAGAAAACG+AGG | 0.692940 | 6_3:+7221598 | None:intergenic |
| GCATGGACATTCCTTCCCGT+AGG | 0.694487 | 6_3:-7218443 | Msa0936480:intron |
| GAGAGCTGAGTAACACGTGT+CGG | 0.695014 | 6_3:+7221370 | None:intergenic |
| ATTTCAGTAAAACCTCGGAA+GGG | 0.704588 | 6_3:-7217374 | Msa0936480:intron |
| TCAGCACCGTTGCAACACGA+TGG | 0.711185 | 6_3:+7218237 | None:intergenic |
| TACGGGAAGGAATGTCCATG+CGG | 0.724567 | 6_3:+7218445 | None:intergenic |
| ATGAAGACTGAAGAACAACA+AGG | 0.733543 | 6_3:+7217346 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTTAATTAAATGTTAAT+TGG | + | chr6_3:7216958-7216977 | None:intergenic | 10.0% |
| !! | ATAAAAAATTATAGTAAACA+AGG | - | chr6_3:7219390-7219409 | Msa0936480:intron | 10.0% |
| !! | TAAAAAATTATAGTAAACAA+GGG | - | chr6_3:7219391-7219410 | Msa0936480:intron | 10.0% |
| !!! | AAAATCTTATCTTTTTTTGT+TGG | - | chr6_3:7217258-7217277 | Msa0936480:CDS | 15.0% |
| !!! | AAATCTTATCTTTTTTTGTT+GGG | - | chr6_3:7217259-7217278 | Msa0936480:CDS | 15.0% |
| !!! | TTGATTTTTTTTTTTTGTTG+TGG | - | chr6_3:7217438-7217457 | Msa0936480:intron | 15.0% |
| !!! | GTTTTTTTAGTGATTATTAT+TGG | - | chr6_3:7217545-7217564 | Msa0936480:intron | 15.0% |
| !! | TCTGAAAATATGTTTATAAA+CGG | - | chr6_3:7218072-7218091 | Msa0936480:intron | 15.0% |
| !!! | AATCTTATCTTTTTTTGTTG+GGG | - | chr6_3:7217260-7217279 | Msa0936480:CDS | 20.0% |
| !!! | GTTTTCAATTTTTTGTTTTC+AGG | - | chr6_3:7217284-7217303 | Msa0936480:CDS | 20.0% |
| !!! | TTAGTGATTATTATTGGTTT+TGG | - | chr6_3:7217551-7217570 | Msa0936480:intron | 20.0% |
| !!! | TCTACTTATAAACACATTTT+CGG | + | chr6_3:7217802-7217821 | None:intergenic | 20.0% |
| !! | CTGAAAATATGTTTATAAAC+GGG | - | chr6_3:7218073-7218092 | Msa0936480:intron | 20.0% |
| !!! | CACTGTAAGATTTTTTTTTA+AGG | + | chr6_3:7218635-7218654 | None:intergenic | 20.0% |
| !! | CTTAAAAAAAAATCTTACAG+TGG | - | chr6_3:7218633-7218652 | Msa0936480:intron | 20.0% |
| !!! | CTGAAAATATTTTTATACGT+GGG | - | chr6_3:7218841-7218860 | Msa0936480:intron | 20.0% |
| !! | TAGTGTCTATTTGAATATAA+TGG | - | chr6_3:7219849-7219868 | Msa0936480:intron | 20.0% |
| !! | TACAAATATTTGTAGAGAAA+GGG | + | chr6_3:7219907-7219926 | None:intergenic | 20.0% |
| !! | TTACAAATATTTGTAGAGAA+AGG | + | chr6_3:7219908-7219927 | None:intergenic | 20.0% |
| !! | AAAGATTAAACAAAAGAAAG+AGG | + | chr6_3:7220212-7220231 | None:intergenic | 20.0% |
| !!! | CTTTCTTTTGTTTAATCTTT+AGG | - | chr6_3:7220212-7220231 | Msa0936480:intron | 20.0% |
| !! | ACAAATAGATTAATCAAAAC+AGG | + | chr6_3:7220839-7220858 | None:intergenic | 20.0% |
| !! | AATAAGCTGAAAACAATTTA+TGG | + | chr6_3:7220966-7220985 | None:intergenic | 20.0% |
| !!! | TGTTTATATTTCGAGTTTAT+TGG | + | chr6_3:7221242-7221261 | None:intergenic | 20.0% |
| !! | AGATTTATTTGTAAAGGAAA+GGG | + | chr6_3:7221780-7221799 | None:intergenic | 20.0% |
| ! | AAGAAAAAACAGAGTAACAA+TGG | + | chr6_3:7217130-7217149 | None:intergenic | 25.0% |
| ! | AGAATGAGAATTCAAGAAAT+GGG | + | chr6_3:7217220-7217239 | None:intergenic | 25.0% |
| ! | AAGAATGAGAATTCAAGAAA+TGG | + | chr6_3:7217221-7217240 | None:intergenic | 25.0% |
| ! | AAAAAAGGTTTATACTACCT+AGG | + | chr6_3:7217376-7217395 | None:intergenic | 25.0% |
| ! | TTTGAACAACACAAGAAAAA+AGG | + | chr6_3:7217391-7217410 | None:intergenic | 25.0% |
| !!! | TTTTTCTTGTGTTGTTCAAA+AGG | - | chr6_3:7217391-7217410 | Msa0936480:intron | 25.0% |
| !!! | TTTTCTTGTGTTGTTCAAAA+GGG | - | chr6_3:7217392-7217411 | Msa0936480:intron | 25.0% |
| ! | ATGTGATCATCTTATTGAAT+TGG | - | chr6_3:7217519-7217538 | Msa0936480:intron | 25.0% |
| ! | CTAATTCAAACCTATAAAAC+CGG | + | chr6_3:7217846-7217865 | None:intergenic | 25.0% |
| ! | AAAATATGTTTATAAACGGG+AGG | - | chr6_3:7218076-7218095 | Msa0936480:intron | 25.0% |
| !! | CTGCTTAAAAACATATTTTC+AGG | + | chr6_3:7218411-7218430 | None:intergenic | 25.0% |
| !!! | CTGAAAATATGTTTTTAAGC+AGG | - | chr6_3:7218409-7218428 | Msa0936480:intron | 25.0% |
| !! | CCACGTATAAAAATATTTTC+AGG | + | chr6_3:7218843-7218862 | None:intergenic | 25.0% |
| !!! | CCTGAAAATATTTTTATACG+TGG | - | chr6_3:7218840-7218859 | Msa0936480:intron | 25.0% |
| !!! | AAAATATTTTTATACGTGGG+AGG | - | chr6_3:7218844-7218863 | Msa0936480:intron | 25.0% |
| !! | TTTTGTGATATTATAGTCGA+AGG | - | chr6_3:7218940-7218959 | Msa0936480:intron | 25.0% |
| ! | TACATGTCAAAATTCATCAT+AGG | - | chr6_3:7219088-7219107 | Msa0936480:intron | 25.0% |
| !!! | ATTGTTTTTATTCCAACACA+TGG | - | chr6_3:7219162-7219181 | Msa0936480:intron | 25.0% |
| !! | AAATGTGTTAGAAACTTGTT+TGG | - | chr6_3:7219247-7219266 | Msa0936480:intron | 25.0% |
| ! | GATCAATCTCATAAAAATGT+TGG | + | chr6_3:7219277-7219296 | None:intergenic | 25.0% |
| !! | ATTTTTATGAGATTGATCCA+TGG | - | chr6_3:7219279-7219298 | Msa0936480:intron | 25.0% |
| !! | AACACAGATTCATAATGTTT+TGG | + | chr6_3:7219439-7219458 | None:intergenic | 25.0% |
| !!! | TGTAACTTGATAATGATGAA+TGG | + | chr6_3:7219709-7219728 | None:intergenic | 25.0% |
| ! | TCATCATTATCAAGTTACAA+AGG | - | chr6_3:7219710-7219729 | Msa0936480:intron | 25.0% |
| ! | CTGGTAACAATTTAATAAAC+TGG | + | chr6_3:7220002-7220021 | None:intergenic | 25.0% |
| ! | CTTCATAAGAAAGAATTTGT+AGG | + | chr6_3:7220073-7220092 | None:intergenic | 25.0% |
| ! | GTGAAACAAAAAACCTAAAA+CGG | + | chr6_3:7220324-7220343 | None:intergenic | 25.0% |
| ! | TATTTGTCTAATGTTGAGAA+GGG | - | chr6_3:7220501-7220520 | Msa0936480:intron | 25.0% |
| !!! | AGTAATTTGATTGCTTTTTC+AGG | - | chr6_3:7220630-7220649 | Msa0936480:intron | 25.0% |
| !!! | GTAATTTGATTGCTTTTTCA+GGG | - | chr6_3:7220631-7220650 | Msa0936480:intron | 25.0% |
| !!! | TAATTTGATTGCTTTTTCAG+GGG | - | chr6_3:7220632-7220651 | Msa0936480:intron | 25.0% |
| ! | AAGATATTAGCTCATTTCAA+TGG | - | chr6_3:7220737-7220756 | Msa0936480:intron | 25.0% |
| !!! | AAATACTTTTGAGACTGTTT+AGG | - | chr6_3:7220910-7220929 | Msa0936480:intron | 25.0% |
| ! | AGCTTATTGTTAGATTATGA+GGG | + | chr6_3:7221265-7221284 | None:intergenic | 25.0% |
| ! | AAGCTTATTGTTAGATTATG+AGG | + | chr6_3:7221266-7221285 | None:intergenic | 25.0% |
| !!! | TAAGCTTTTGTCTCATTTTT+TGG | - | chr6_3:7221279-7221298 | Msa0936480:intron | 25.0% |
| ! | AACTGAATAGAAATGAAGAA+AGG | - | chr6_3:7221733-7221752 | Msa0936480:five_prime_UTR | 25.0% |
| ! | GAGATTTATTTGTAAAGGAA+AGG | + | chr6_3:7221781-7221800 | None:intergenic | 25.0% |
| ! | AAGGAGAGATTTATTTGTAA+AGG | + | chr6_3:7221786-7221805 | None:intergenic | 25.0% |
| !! | AGACATTTGTTAAATGTGAA+AGG | + | chr6_3:7221805-7221824 | None:intergenic | 25.0% |
| AATAAGAGAGATTAGAGAGA+GGG | + | chr6_3:7217010-7217029 | None:intergenic | 30.0% | |
| AAATAAGAGAGATTAGAGAG+AGG | + | chr6_3:7217011-7217030 | None:intergenic | 30.0% | |
| ! | ATTATGTTGTGTTGTTATGC+AGG | - | chr6_3:7217461-7217480 | Msa0936480:intron | 30.0% |
| ! | TTATGTTGTGTTGTTATGCA+GGG | - | chr6_3:7217462-7217481 | Msa0936480:intron | 30.0% |
| TCGATAACGTGTTTATAAGT+CGG | - | chr6_3:7217693-7217712 | Msa0936480:intron | 30.0% | |
| !! | ACCTTATAAGCTGATTTTGT+AGG | - | chr6_3:7217727-7217746 | Msa0936480:intron | 30.0% |
| !! | CCTTATAAGCTGATTTTGTA+GGG | - | chr6_3:7217728-7217747 | Msa0936480:intron | 30.0% |
| !! | CGGTTTTATAGGTTTGAATT+AGG | - | chr6_3:7217844-7217863 | Msa0936480:intron | 30.0% |
| TATAGGTTTGAATTAGGCTA+TGG | - | chr6_3:7217850-7217869 | Msa0936480:intron | 30.0% | |
| TTGAATTAGGCTATGGTATT+TGG | - | chr6_3:7217857-7217876 | Msa0936480:intron | 30.0% | |
| ATTCCTTCACAAATTTCCTA+TGG | - | chr6_3:7217982-7218001 | Msa0936480:intron | 30.0% | |
| AAAATCGGTGTGTAAAGTAA+GGG | + | chr6_3:7218105-7218124 | None:intergenic | 30.0% | |
| ATTCCTTCACAAATTTCCTA+TGG | - | chr6_3:7217982-7218001 | Msa0936480:intron | 30.0% | |
| ! | GTGAGATCAGTGTTATTAAA+TGG | + | chr6_3:7218683-7218702 | None:intergenic | 30.0% |
| CCCTCTTATAAACTAATTTC+CGG | + | chr6_3:7218710-7218729 | None:intergenic | 30.0% | |
| ! | CCGGAAATTAGTTTATAAGA+GGG | - | chr6_3:7218707-7218726 | Msa0936480:intron | 30.0% |
| ATATAACAAGAACCATGTGT+TGG | + | chr6_3:7219177-7219196 | None:intergenic | 30.0% | |
| ! | AACACATGGTTCTTGTTATA+TGG | - | chr6_3:7219176-7219195 | Msa0936480:intron | 30.0% |
| ! | GTGTCGTTAAAGATTCAAAA+TGG | + | chr6_3:7219216-7219235 | None:intergenic | 30.0% |
| AACATTATGAATCTGTGTTC+AGG | - | chr6_3:7219440-7219459 | Msa0936480:intron | 30.0% | |
| AACCATTAAGCATGAAGATA+TGG | + | chr6_3:7219484-7219503 | None:intergenic | 30.0% | |
| !!! | TTTTTTAAAGATGACGCCAA+TGG | + | chr6_3:7219672-7219691 | None:intergenic | 30.0% |
| !! | ACTTGATAATGATGAATGGT+TGG | + | chr6_3:7219705-7219724 | None:intergenic | 30.0% |
| AACCTTGATGCATTTAATTG+TGG | - | chr6_3:7219818-7219837 | Msa0936480:intron | 30.0% | |
| ATACCAACACTTCAAATTGA+AGG | - | chr6_3:7219927-7219946 | Msa0936480:intron | 30.0% | |
| CATATGTCAAACAACTGAAT+TGG | + | chr6_3:7220150-7220169 | None:intergenic | 30.0% | |
| !! | CTTTAGGATGAAATAGTTTC+TGG | - | chr6_3:7220228-7220247 | Msa0936480:intron | 30.0% |
| GTATTTGTCTAATGTTGAGA+AGG | - | chr6_3:7220500-7220519 | Msa0936480:intron | 30.0% | |
| TCAAATTACTCATCTAGTCA+TGG | + | chr6_3:7220620-7220639 | None:intergenic | 30.0% | |
| ! | ATTAAGTTGTTTGTCCAAAC+AGG | - | chr6_3:7221081-7221100 | Msa0936480:intron | 30.0% |
| ! | TTAAGTTGTTTGTCCAAACA+GGG | - | chr6_3:7221082-7221101 | Msa0936480:intron | 30.0% |
| ! | TCAGTAAGCTATTCTGTTTT+TGG | - | chr6_3:7221177-7221196 | Msa0936480:intron | 30.0% |
| !! | CAGTAAGCTATTCTGTTTTT+GGG | - | chr6_3:7221178-7221197 | Msa0936480:intron | 30.0% |
| !!! | AGTAAGCTATTCTGTTTTTG+GGG | - | chr6_3:7221179-7221198 | Msa0936480:intron | 30.0% |
| !!! | TTTGTCTCATTTTTTGGCTT+AGG | - | chr6_3:7221285-7221304 | Msa0936480:intron | 30.0% |
| TGAGAAAAATCCACGTTATA+TGG | - | chr6_3:7221578-7221597 | Msa0936480:CDS | 30.0% | |
| AAAAATCCACGTTATATGGT+TGG | - | chr6_3:7221582-7221601 | Msa0936480:CDS | 30.0% | |
| !!! | TTAGAGAGAGGGTTTTGTTT+AGG | + | chr6_3:7216999-7217018 | None:intergenic | 35.0% |
| AGTAACAATGGAAGAAAACG+AGG | + | chr6_3:7217118-7217137 | None:intergenic | 35.0% | |
| GTTTCTTCAATTCGATTACC+TGG | - | chr6_3:7217154-7217173 | Msa0936480:CDS | 35.0% | |
| TTCAATTCGATTACCTGGTT+TGG | - | chr6_3:7217159-7217178 | Msa0936480:CDS | 35.0% | |
| ! | TTGTTTTCTTCTTCCAAACC+AGG | + | chr6_3:7217175-7217194 | None:intergenic | 35.0% |
| !!! | CAATTTTTTGTTTTCAGGCG+TGG | - | chr6_3:7217289-7217308 | Msa0936480:CDS | 35.0% |
| ! | GTTGTTCAAAAGGGTTGTTT+TGG | - | chr6_3:7217401-7217420 | Msa0936480:intron | 35.0% |
| ATAACGTGTTTATAAGTCGG+AGG | - | chr6_3:7217696-7217715 | Msa0936480:intron | 35.0% | |
| CAAAATCAGCTTATAAGGTG+AGG | + | chr6_3:7217726-7217745 | None:intergenic | 35.0% | |
| CCCTACAAAATCAGCTTATA+AGG | + | chr6_3:7217731-7217750 | None:intergenic | 35.0% | |
| ! | TGATTTTGTAGGGTTCAGTT+AGG | - | chr6_3:7217738-7217757 | Msa0936480:intron | 35.0% |
| !! | GGTTCAGTTAGGATTTGTTA+TGG | - | chr6_3:7217749-7217768 | Msa0936480:intron | 35.0% |
| ! | AAACACATTTTCGGAACATC+AGG | + | chr6_3:7217793-7217812 | None:intergenic | 35.0% |
| !!! | AATTTTTTGCCTACCAGCAT+TGG | + | chr6_3:7217915-7217934 | None:intergenic | 35.0% |
| CTGTTATTAAATGGCAGTCA+CGG | + | chr6_3:7218039-7218058 | None:intergenic | 35.0% | |
| ! | TGACTGCCATTTAATAACAG+TGG | - | chr6_3:7218039-7218058 | Msa0936480:CDS | 35.0% |
| GTGAGACCACTGTTATTAAA+TGG | + | chr6_3:7218048-7218067 | None:intergenic | 35.0% | |
| CAAAATCGGTGTGTAAAGTA+AGG | + | chr6_3:7218106-7218125 | None:intergenic | 35.0% | |
| !!! | ACTTTACACACCGATTTTGT+AGG | - | chr6_3:7218107-7218126 | Msa0936480:intron | 35.0% |
| CAAGCTCAATCCTACAAAAT+CGG | + | chr6_3:7218120-7218139 | None:intergenic | 35.0% | |
| ! | TTGTTTACACAGCAGACTTT+TGG | + | chr6_3:7218265-7218284 | None:intergenic | 35.0% |
| TTATTAAATGGCAGCCATAG+TGG | + | chr6_3:7218372-7218391 | None:intergenic | 35.0% | |
| ! | GTGAGACCAGTGTTATTAAA+TGG | + | chr6_3:7218384-7218403 | None:intergenic | 35.0% |
| !! | AAAACTGGCTTGTAAGGTAA+GGG | + | chr6_3:7218441-7218460 | None:intergenic | 35.0% |
| TTATTAAATGGCAGCCATGA+CGG | + | chr6_3:7218671-7218690 | None:intergenic | 35.0% | |
| ! | GCCGGAAATTAGTTTATAAG+AGG | - | chr6_3:7218706-7218725 | Msa0936480:intron | 35.0% |
| CTAACTCAAACATGCAAAAC+TGG | + | chr6_3:7218750-7218769 | None:intergenic | 35.0% | |
| !! | CAGTTTTGCATGTTTGAGTT+AGG | - | chr6_3:7218748-7218767 | Msa0936480:intron | 35.0% |
| ACAGAAGCGATTTATAAGGT+TGG | + | chr6_3:7218873-7218892 | None:intergenic | 35.0% | |
| ACCTTATAAATCGCTTCTGT+AGG | - | chr6_3:7218873-7218892 | Msa0936480:intron | 35.0% | |
| CCTTATAAATCGCTTCTGTA+GGG | - | chr6_3:7218874-7218893 | Msa0936480:intron | 35.0% | |
| ATTATAGTCGAAGGATAAGC+TGG | - | chr6_3:7218949-7218968 | Msa0936480:intron | 35.0% | |
| AAACAAATCACTCATCTCCA+TGG | + | chr6_3:7219299-7219318 | None:intergenic | 35.0% | |
| CTCCATATCTTCATGCTTAA+TGG | - | chr6_3:7219479-7219498 | Msa0936480:intron | 35.0% | |
| TCCTATCTAGATTCTTCCTT+TGG | - | chr6_3:7219533-7219552 | Msa0936480:intron | 35.0% | |
| TCCAAAGGAAGAATCTAGAT+AGG | + | chr6_3:7219537-7219556 | None:intergenic | 35.0% | |
| ! | CTACATTTTCACAACTCCAA+AGG | + | chr6_3:7219552-7219571 | None:intergenic | 35.0% |
| TTGGAGTTGTGAAAATGTAG+TGG | - | chr6_3:7219552-7219571 | Msa0936480:intron | 35.0% | |
| AAGATGATGAGGGAAAAAGT+AGG | + | chr6_3:7219602-7219621 | None:intergenic | 35.0% | |
| CCTCATAAACAAGATGATGA+GGG | + | chr6_3:7219612-7219631 | None:intergenic | 35.0% | |
| CACCACAATTAAATGCATCA+AGG | + | chr6_3:7219823-7219842 | None:intergenic | 35.0% | |
| AAAGGGTTATTGTGAAAGCT+GGG | + | chr6_3:7219890-7219909 | None:intergenic | 35.0% | |
| AATTTGTAGGTATGAAGCAC+CGG | + | chr6_3:7220060-7220079 | None:intergenic | 35.0% | |
| ! | CAAGTATTGCACTACATGAA+CGG | - | chr6_3:7220393-7220412 | Msa0936480:intron | 35.0% |
| TCGTGGAAGAAATCAAAATG+TGG | + | chr6_3:7220432-7220451 | None:intergenic | 35.0% | |
| !!! | TTTTGATTTCTTCCACGACA+AGG | - | chr6_3:7220434-7220453 | Msa0936480:intron | 35.0% |
| TACATGTGAAAGTCTTACCT+CGG | + | chr6_3:7220550-7220569 | None:intergenic | 35.0% | |
| ! | TTTCTTTTGTTAGCGAGTGT+AGG | + | chr6_3:7220587-7220606 | None:intergenic | 35.0% |
| CTGTGATTTCAGTAAAACCT+CGG | - | chr6_3:7221334-7221353 | Msa0936480:intron | 35.0% | |
| ATTTCAGTAAAACCTCGGAA+GGG | - | chr6_3:7221339-7221358 | Msa0936480:intron | 35.0% | |
| ATGAAGACTGAAGAACAACA+AGG | + | chr6_3:7221370-7221389 | None:intergenic | 35.0% | |
| ! | ATGCAAGCTTTTTGAATCTG+TGG | + | chr6_3:7221403-7221422 | None:intergenic | 35.0% |
| ACAGATTCAAAAAGCTTGCA+TGG | - | chr6_3:7221402-7221421 | Msa0936480:CDS | 35.0% | |
| ATGAGAATGAGAATTGTGCT+AGG | - | chr6_3:7221535-7221554 | Msa0936480:CDS | 35.0% | |
| AATGTTTGCTCTTCTTAGAG+AGG | - | chr6_3:7221642-7221661 | Msa0936480:five_prime_UTR | 35.0% | |
| TCTTCTTAGAGAGGTTATCA+TGG | - | chr6_3:7221651-7221670 | Msa0936480:five_prime_UTR | 35.0% | |
| ! | GATTCCCACAGATTTGAGTT+TGG | + | chr6_3:7216910-7216929 | None:intergenic | 40.0% |
| ACAATGGAAGAAAACGAGGT+TGG | + | chr6_3:7217114-7217133 | None:intergenic | 40.0% | |
| !!! | TTTTGTTTTCAGGCGTGGAT+CGG | - | chr6_3:7217294-7217313 | Msa0936480:CDS | 40.0% |
| !!! | AAGGGTTGTTTTGGTTTTCG+AGG | - | chr6_3:7217410-7217429 | Msa0936480:intron | 40.0% |
| CATGTTCCATATTGAGAGTC+TGG | - | chr6_3:7217652-7217671 | Msa0936480:intron | 40.0% | |
| ! | TTTTCGCCAGACTCTCAATA+TGG | + | chr6_3:7217661-7217680 | None:intergenic | 40.0% |
| GCATTTATCGTCTTACAAGC+CGG | - | chr6_3:7217824-7217843 | Msa0936480:intron | 40.0% | |
| !! | GTCTTACAAGCCGGTTTTAT+AGG | - | chr6_3:7217833-7217852 | Msa0936480:intron | 40.0% |
| GTCCTATAAACAAGCCAATC+CGG | - | chr6_3:7217936-7217955 | Msa0936480:intron | 40.0% | |
| TGAAGGAATGTCCACCATAA+GGG | + | chr6_3:7217971-7217990 | None:intergenic | 40.0% | |
| CCACCATAGGAAATTTGTGA+AGG | + | chr6_3:7217988-7218007 | None:intergenic | 40.0% | |
| CCTTCACAAATTTCCTATGG+TGG | - | chr6_3:7217985-7218004 | Msa0936480:intron | 40.0% | |
| TTATTAAATGGCAGTCACGG+TGG | + | chr6_3:7218036-7218055 | None:intergenic | 40.0% | |
| ! | CGATTTTGTAGGATTGAGCT+TGG | - | chr6_3:7218118-7218137 | Msa0936480:intron | 40.0% |
| TCTTATCTGTTATCACACCC+AGG | + | chr6_3:7218191-7218210 | None:intergenic | 40.0% | |
| TTGTGAAGGAATGTCTACCA+TGG | + | chr6_3:7218310-7218329 | None:intergenic | 40.0% | |
| CCTTCACAAATTTCCTATGG+CGG | - | chr6_3:7217985-7218004 | Msa0936480:intron | 40.0% | |
| ! | TGGCTGCCATTTAATAACAC+TGG | - | chr6_3:7218375-7218394 | Msa0936480:intron | 40.0% |
| !! | CAAAACTGGCTTGTAAGGTA+AGG | + | chr6_3:7218442-7218461 | None:intergenic | 40.0% |
| !! | ACCTTACAAGCCAGTTTTGT+AGG | - | chr6_3:7218443-7218462 | Msa0936480:intron | 40.0% |
| CTAACTCAAGCCTACAAAAC+TGG | + | chr6_3:7218456-7218475 | None:intergenic | 40.0% | |
| !! | CAGTTTTGTAGGCTTGAGTT+AGG | - | chr6_3:7218454-7218473 | Msa0936480:CDS | 40.0% |
| ! | GAAAGTCTCAGTGTTGTTGA+TGG | - | chr6_3:7218531-7218550 | Msa0936480:intron | 40.0% |
| !! | GTGTTGTTGATGGTGGTATA+TGG | - | chr6_3:7218541-7218560 | Msa0936480:intron | 40.0% |
| !! | TTGTTGATGGTGGTATATGG+CGG | - | chr6_3:7218544-7218563 | Msa0936480:intron | 40.0% |
| !! | TGTGTTATGAGGCGGATTTT+TGG | + | chr6_3:7218574-7218593 | None:intergenic | 40.0% |
| TAACACTGATCTCACATTGC+CGG | - | chr6_3:7218688-7218707 | Msa0936480:intron | 40.0% | |
| TCAAACATGCAAAACTGGCT+TGG | + | chr6_3:7218745-7218764 | None:intergenic | 40.0% | |
| ! | TGCTCGAGATTTTCAATCCT+TGG | - | chr6_3:7218796-7218815 | Msa0936480:intron | 40.0% |
| CCCTACAGAAGCGATTTATA+AGG | + | chr6_3:7218877-7218896 | None:intergenic | 40.0% | |
| AGTGAAGTCAGAACTAGTTC+TGG | - | chr6_3:7219016-7219035 | Msa0936480:intron | 40.0% | |
| ! | GTGAAGTCAGAACTAGTTCT+GGG | - | chr6_3:7219017-7219036 | Msa0936480:intron | 40.0% |
| GATGTTTCTCAACAAGCAAC+AGG | - | chr6_3:7219039-7219058 | Msa0936480:intron | 40.0% | |
| ! | CCCTCATCATCTTGTTTATG+AGG | - | chr6_3:7219609-7219628 | Msa0936480:intron | 40.0% |
| GCCTCATAAACAAGATGATG+AGG | + | chr6_3:7219613-7219632 | None:intergenic | 40.0% | |
| !!! | CTTTATTTTCTCAGCGCCAT+TGG | - | chr6_3:7219653-7219672 | Msa0936480:intron | 40.0% |
| GAAAGGGTTATTGTGAAAGC+TGG | + | chr6_3:7219891-7219910 | None:intergenic | 40.0% | |
| ! | ACGCCTTCAATTTGAAGTGT+TGG | + | chr6_3:7219933-7219952 | None:intergenic | 40.0% |
| ! | ACTTCAAATTGAAGGCGTGT+CGG | - | chr6_3:7219935-7219954 | Msa0936480:intron | 40.0% |
| ACAGACACAAACACTGAACA+AGG | + | chr6_3:7220036-7220055 | None:intergenic | 40.0% | |
| TGGTGTCTACTACTTACCTA+CGG | + | chr6_3:7220289-7220308 | None:intergenic | 40.0% | |
| TAGTAGACACCATCATGCTT+TGG | - | chr6_3:7220297-7220316 | Msa0936480:intron | 40.0% | |
| TAAAACGGACCAAAGCATGA+TGG | + | chr6_3:7220309-7220328 | None:intergenic | 40.0% | |
| ! | ATCATGCTTTGGTCCGTTTT+AGG | - | chr6_3:7220308-7220327 | Msa0936480:intron | 40.0% |
| AGCTCTTATCCATCAGAGAA+TGG | - | chr6_3:7220360-7220379 | Msa0936480:intron | 40.0% | |
| ATAGACTCACCATTCTCTGA+TGG | + | chr6_3:7220372-7220391 | None:intergenic | 40.0% | |
| TTGTCTAATGTTGAGAAGGG+TGG | - | chr6_3:7220504-7220523 | Msa0936480:intron | 40.0% | |
| !!! | TTTGATTGCTTTTTCAGGGG+AGG | - | chr6_3:7220635-7220654 | Msa0936480:intron | 40.0% |
| AGACTGTTTAGGAGAGCTTA+TGG | - | chr6_3:7220921-7220940 | Msa0936480:intron | 40.0% | |
| ATGAAAATGCACACCCTGTT+TGG | + | chr6_3:7221098-7221117 | None:intergenic | 40.0% | |
| !! | TTTTTGGGGACGAATGAGAT+TGG | - | chr6_3:7221193-7221212 | Msa0936480:intron | 40.0% |
| !! | TTTTGGGGACGAATGAGATT+GGG | - | chr6_3:7221194-7221213 | Msa0936480:intron | 40.0% |
| GATTTCAGTAAAACCTCGGA+AGG | - | chr6_3:7221338-7221357 | Msa0936480:intron | 40.0% | |
| !! | TCGTATCGGTTTCTCAAAGT+CGG | + | chr6_3:7221484-7221503 | None:intergenic | 40.0% |
| AGAATGAGAATTGTGCTAGG+TGG | - | chr6_3:7221538-7221557 | Msa0936480:CDS | 40.0% | |
| GAATGAGAATTGTGCTAGGT+GGG | - | chr6_3:7221539-7221558 | Msa0936480:CDS | 40.0% | |
| CCATTACCAACCATATAACG+TGG | + | chr6_3:7221591-7221610 | None:intergenic | 40.0% | |
| !! | CCACGTTATATGGTTGGTAA+TGG | - | chr6_3:7221588-7221607 | Msa0936480:CDS | 40.0% |
| !! | CGTTATATGGTTGGTAATGG+AGG | - | chr6_3:7221591-7221610 | Msa0936480:CDS | 40.0% |
| !! | GTTGGTAATGGAGGAGTTAA+AGG | - | chr6_3:7221600-7221619 | Msa0936480:CDS | 40.0% |
| AAGAAAGGAGTTCTCCTCTA+GGG | - | chr6_3:7221748-7221767 | Msa0936480:five_prime_UTR | 40.0% | |
| AGACGCCAAACTCAAATCTG+TGG | - | chr6_3:7216902-7216921 | Msa0936480:three_prime_UTR | 45.0% | |
| GACGCCAAACTCAAATCTGT+GGG | - | chr6_3:7216903-7216922 | Msa0936480:three_prime_UTR | 45.0% | |
| TAGGCTATGGTATTTGGCCA+TGG | - | chr6_3:7217863-7217882 | Msa0936480:intron | 45.0% | |
| CTATGGTATTTGGCCATGGT+GGG | - | chr6_3:7217867-7217886 | Msa0936480:intron | 45.0% | |
| GTGAAGGAATGTCCACCATA+AGG | + | chr6_3:7217972-7217991 | None:intergenic | 45.0% | |
| GATCTTAAGACGACCACCAT+AGG | + | chr6_3:7218001-7218020 | None:intergenic | 45.0% | |
| GCTGTGTAAACAACCCATTG+CGG | - | chr6_3:7218272-7218291 | Msa0936480:CDS | 45.0% | |
| CCGCCATAGGAAATTTGTGA+AGG | + | chr6_3:7218324-7218343 | None:intergenic | 45.0% | |
| !!! | GATTTTAAGACGACCGCCAT+AGG | + | chr6_3:7218337-7218356 | None:intergenic | 45.0% |
| !! | GCCTACAAAACTGGCTTGTA+AGG | + | chr6_3:7218447-7218466 | None:intergenic | 45.0% |
| TGCTCCTGATGTTCAGTTCT+GGG | - | chr6_3:7218502-7218521 | Msa0936480:intron | 45.0% | |
| ! | AGTCTCAGTGTTGTTGATGG+TGG | - | chr6_3:7218534-7218553 | Msa0936480:intron | 45.0% |
| GGTTGTCTTAAGATCCGTCA+TGG | - | chr6_3:7218654-7218673 | Msa0936480:intron | 45.0% | |
| !! | ATGCAAAACTGGCTTGGTGA+GGG | + | chr6_3:7218739-7218758 | None:intergenic | 45.0% |
| GTAAGACTCTCAACACACCA+AGG | + | chr6_3:7218816-7218835 | None:intergenic | 45.0% | |
| CGCTTCTGTAGGGTTGAATT+AGG | - | chr6_3:7218884-7218903 | Msa0936480:intron | 45.0% | |
| GGATAAGCTGGAGAAGTCTA+TGG | - | chr6_3:7218961-7218980 | Msa0936480:intron | 45.0% | |
| TAAGCTGGAGAAGTCTATGG+TGG | - | chr6_3:7218964-7218983 | Msa0936480:intron | 45.0% | |
| !! | ATGGTGGCGGATAATGAATC+TGG | - | chr6_3:7218980-7218999 | Msa0936480:intron | 45.0% |
| AACACTGAACAAGGACACGT+CGG | + | chr6_3:7220027-7220046 | None:intergenic | 45.0% | |
| TTCAGTGTTTGTGTCTGTGC+CGG | - | chr6_3:7220038-7220057 | Msa0936480:intron | 45.0% | |
| TCTACTACTTACCTACGGGA+AGG | + | chr6_3:7220284-7220303 | None:intergenic | 45.0% | |
| GGTGTCTACTACTTACCTAC+GGG | + | chr6_3:7220288-7220307 | None:intergenic | 45.0% | |
| GACAAGGCTAATCAACGACT+TGG | - | chr6_3:7220450-7220469 | Msa0936480:intron | 45.0% | |
| ! | AAGGCTAATCAACGACTTGG+CGG | - | chr6_3:7220453-7220472 | Msa0936480:intron | 45.0% |
| !! | AACCATTTTTCCTCATGCCG+AGG | - | chr6_3:7220530-7220549 | Msa0936480:intron | 45.0% |
| TACCTCGGCATGAGGAAAAA+TGG | + | chr6_3:7220535-7220554 | None:intergenic | 45.0% | |
| ! | TCTGACCAGCTCTCATCTTT+TGG | + | chr6_3:7220670-7220689 | None:intergenic | 45.0% |
| TGGTCAGAATGTGCTCACAA+AGG | - | chr6_3:7220682-7220701 | Msa0936480:intron | 45.0% | |
| TGTGCTCACAAAGGATATGC+AGG | - | chr6_3:7220691-7220710 | Msa0936480:intron | 45.0% | |
| CACTTCTCACCTTCAATCAC+TGG | + | chr6_3:7221435-7221454 | None:intergenic | 45.0% | |
| CAGTGATTGAAGGTGAGAAG+TGG | - | chr6_3:7221433-7221452 | Msa0936480:intron | 45.0% | |
| AGAAGTGGTCAGCAACAAAG+TGG | - | chr6_3:7221448-7221467 | Msa0936480:intron | 45.0% | |
| GAAACCGATACGACAAGCAT+TGG | - | chr6_3:7221491-7221510 | Msa0936480:intron | 45.0% | |
| TCCTCCAATGCTTGTCGTAT+CGG | + | chr6_3:7221498-7221517 | None:intergenic | 45.0% | |
| GAAGAAAGGAGTTCTCCTCT+AGG | - | chr6_3:7221747-7221766 | Msa0936480:five_prime_UTR | 45.0% | |
| GGAAAGGGTAAAAACCCTAG+AGG | + | chr6_3:7221765-7221784 | None:intergenic | 45.0% | |
| !!! | TTACTATAATTTTTTATATT+GGG | + | chr6_3:7219387-7219406 | None:intergenic | 5.0% |
| !!! | TTTACTATAATTTTTTATAT+TGG | + | chr6_3:7219388-7219407 | None:intergenic | 5.0% |
| !! | TTCAGGCGTGGATCGGTTTT+TGG | - | chr6_3:7217301-7217320 | Msa0936480:CDS | 50.0% |
| GAGAGCTGAGTAACACGTGT+CGG | + | chr6_3:7217346-7217365 | None:intergenic | 50.0% | |
| ! | CATCAGGAGCACAACATGAG+CGG | + | chr6_3:7217777-7217796 | None:intergenic | 50.0% |
| GCTATGGTATTTGGCCATGG+TGG | - | chr6_3:7217866-7217885 | Msa0936480:intron | 50.0% | |
| GTGAGACTCTTAACCCACCA+TGG | + | chr6_3:7217883-7217902 | None:intergenic | 50.0% | |
| TCACACAGTGTTGCCAATGC+TGG | - | chr6_3:7217899-7217918 | Msa0936480:intron | 50.0% | |
| ACAGTGTTGCCAATGCTGGT+AGG | - | chr6_3:7217903-7217922 | Msa0936480:intron | 50.0% | |
| !! | GGCCGGATTGGCTTGTTTAT+AGG | + | chr6_3:7217941-7217960 | None:intergenic | 50.0% |
| AAACAAGCCAATCCGGCCTA+TGG | - | chr6_3:7217943-7217962 | Msa0936480:intron | 50.0% | |
| AAATGGCAGTCACGGTGGAA+TGG | + | chr6_3:7218031-7218050 | None:intergenic | 50.0% | |
| ! | TCAGGACAGGAGTGCAACAA+GGG | + | chr6_3:7218160-7218179 | None:intergenic | 50.0% |
| ! | ATCAGGACAGGAGTGCAACA+AGG | + | chr6_3:7218161-7218180 | None:intergenic | 50.0% |
| CTGTCCTGATGTTCAGTCCT+GGG | - | chr6_3:7218171-7218190 | Msa0936480:intron | 50.0% | |
| GAGAGTCTCACACAGTGTTG+TGG | - | chr6_3:7218219-7218238 | Msa0936480:CDS | 50.0% | |
| AGTCTCACACAGTGTTGTGG+AGG | - | chr6_3:7218222-7218241 | Msa0936480:CDS | 50.0% | |
| GTCTCACACAGTGTTGTGGA+GGG | - | chr6_3:7218223-7218242 | Msa0936480:CDS | 50.0% | |
| GTGTTGTGGAGGGTGGAATA+TGG | - | chr6_3:7218233-7218252 | Msa0936480:CDS | 50.0% | |
| TGGAGGGTGGAATATGGTGA+AGG | - | chr6_3:7218239-7218258 | Msa0936480:CDS | 50.0% | |
| GTCTACCATGGCAGTGACAT+AGG | + | chr6_3:7218298-7218317 | None:intergenic | 50.0% | |
| ! | ACATCAGGAGCACGACATGA+GGG | + | chr6_3:7218494-7218513 | None:intergenic | 50.0% |
| ! | AACATCAGGAGCACGACATG+AGG | + | chr6_3:7218495-7218514 | None:intergenic | 50.0% |
| GTGCTCCTGATGTTCAGTTC+TGG | - | chr6_3:7218501-7218520 | Msa0936480:intron | 50.0% | |
| CACACCCAGAACTGAACATC+AGG | + | chr6_3:7218509-7218528 | None:intergenic | 50.0% | |
| !! | TGATGGTGGTATATGGCGGA+AGG | - | chr6_3:7218548-7218567 | Msa0936480:intron | 50.0% |
| !! | CATGCAAAACTGGCTTGGTG+AGG | + | chr6_3:7218740-7218759 | None:intergenic | 50.0% |
| GGGTTATTGTGAAAGCTGGG+AGG | + | chr6_3:7219887-7219906 | None:intergenic | 50.0% | |
| TTGAAGCACGAATTGCCGCA+TGG | - | chr6_3:7220253-7220272 | Msa0936480:intron | 50.0% | |
| TACGGGAAGGAATGTCCATG+CGG | + | chr6_3:7220271-7220290 | None:intergenic | 50.0% | |
| !! | GTCGTTGATTAGCCTTGTCG+TGG | + | chr6_3:7220449-7220468 | None:intergenic | 50.0% |
| GAAAGTCTTACCTCGGCATG+AGG | + | chr6_3:7220543-7220562 | None:intergenic | 50.0% | |
| ATCTCTTGCTTCCACCTGCA+CGG | - | chr6_3:7220812-7220831 | Msa0936480:intron | 50.0% | |
| TAATCAAAACAGGCCCGTGC+AGG | + | chr6_3:7220829-7220848 | None:intergenic | 50.0% | |
| GGAAGCTGTCCAGTGATTGA+AGG | - | chr6_3:7221423-7221442 | Msa0936480:intron | 50.0% | |
| !! | ACCGATACGACAAGCATTGG+AGG | - | chr6_3:7221494-7221513 | Msa0936480:intron | 50.0% |
| !! | CGACAAGCATTGGAGGATGA+TGG | - | chr6_3:7221501-7221520 | Msa0936480:intron | 50.0% |
| !! | TGTGCTAGGTGGGCTAAAGT+TGG | - | chr6_3:7221549-7221568 | Msa0936480:CDS | 50.0% |
| ! | CACGTGTTACTCAGCTCTCG+TGG | - | chr6_3:7217347-7217366 | Msa0936480:CDS | 55.0% |
| CCAGGACTGAACATCAGGAC+AGG | + | chr6_3:7218173-7218192 | None:intergenic | 55.0% | |
| CCTGTCCTGATGTTCAGTCC+TGG | - | chr6_3:7218170-7218189 | Msa0936480:intron | 55.0% | |
| CACACCCAGGACTGAACATC+AGG | + | chr6_3:7218178-7218197 | None:intergenic | 55.0% | |
| TCACACAGTGTTGTGGAGGG+TGG | - | chr6_3:7218226-7218245 | Msa0936480:CDS | 55.0% | |
| GCAGTGACATAGGCCGCAAT+GGG | + | chr6_3:7218288-7218307 | None:intergenic | 55.0% | |
| TCCGCCATGCTGTTCCACTA+TGG | - | chr6_3:7218355-7218374 | Msa0936480:intron | 55.0% | |
| ! | GCCATAGTGGAACAGCATGG+CGG | + | chr6_3:7218359-7218378 | None:intergenic | 55.0% |
| ! | GCAGCCATAGTGGAACAGCA+TGG | + | chr6_3:7218362-7218381 | None:intergenic | 55.0% |
| ! | CATCAGGAGCACGACATGAG+GGG | + | chr6_3:7218493-7218512 | None:intergenic | 55.0% |
| CAGTGGCGTGTGTTATGAGG+CGG | + | chr6_3:7218582-7218601 | None:intergenic | 55.0% | |
| CTGCAGTGGCGTGTGTTATG+AGG | + | chr6_3:7218585-7218604 | None:intergenic | 55.0% | |
| ! | GCAGCCTTATGGCGCTGTTA+TGG | - | chr6_3:7218601-7218620 | Msa0936480:intron | 55.0% |
| GCCTTATGGCGCTGTTATGG+CGG | - | chr6_3:7218604-7218623 | Msa0936480:intron | 55.0% | |
| TCCGCCATAACAGCGCCATA+AGG | + | chr6_3:7218608-7218627 | None:intergenic | 55.0% | |
| GCTGGAGAAGTCTATGGTGG+CGG | - | chr6_3:7218967-7218986 | Msa0936480:intron | 55.0% | |
| TCACACGCGTCAGTGTCATG+CGG | + | chr6_3:7219964-7219983 | None:intergenic | 55.0% | |
| GCATGGACATTCCTTCCCGT+AGG | - | chr6_3:7220270-7220289 | Msa0936480:intron | 55.0% | |
| TCAGCACCGTTGCAACACGA+TGG | + | chr6_3:7220479-7220498 | None:intergenic | 55.0% | |
| CGCAGCCAAAAGATGAGAGC+TGG | - | chr6_3:7220662-7220681 | Msa0936480:intron | 55.0% | |
| TCTCTTGCTTCCACCTGCAC+GGG | - | chr6_3:7220813-7220832 | Msa0936480:intron | 55.0% | |
| CTCAGCTCTCGTGGAGTCCT+AGG | - | chr6_3:7217356-7217375 | Msa0936480:CDS | 60.0% | |
| !! | ACCATAAGGGCGCCATAGGC+CGG | + | chr6_3:7217958-7217977 | None:intergenic | 60.0% |
| !! | GTCCACCATAAGGGCGCCAT+AGG | + | chr6_3:7217962-7217981 | None:intergenic | 60.0% |
| ! | GGACAGGAGTGCAACAAGGG+TGG | + | chr6_3:7218157-7218176 | None:intergenic | 60.0% |
| GGCAGTGACATAGGCCGCAA+TGG | + | chr6_3:7218289-7218308 | None:intergenic | 60.0% | |
| TGCGGCCTATGTCACTGCCA+TGG | - | chr6_3:7218290-7218309 | Msa0936480:CDS | 60.0% | |
| CACACGCCACTGCAGCCTTA+TGG | - | chr6_3:7218590-7218609 | Msa0936480:intron | 60.0% | |
| ACAGCGCCATAAGGCTGCAG+TGG | + | chr6_3:7218599-7218618 | None:intergenic | 60.0% | |
| GAACAAGGACACGTCGGCAC+TGG | + | chr6_3:7220021-7220040 | None:intergenic | 60.0% | |
| TGGCGGCCATCGTGTTGCAA+CGG | - | chr6_3:7220470-7220489 | Msa0936480:intron | 60.0% | |
| TCAAAACAGGCCCGTGCAGG+TGG | + | chr6_3:7220826-7220845 | None:intergenic | 60.0% | |
| ! | AACAAGGCGTCACCCTTCCG+AGG | + | chr6_3:7221354-7221373 | None:intergenic | 60.0% |
| !! | AAGGGCGCCATAGGCCGGAT+TGG | + | chr6_3:7217953-7217972 | None:intergenic | 65.0% |
| TCCGGCCTATGGCGCCCTTA+TGG | - | chr6_3:7217954-7217973 | Msa0936480:intron | 65.0% | |
| GGCCTATGGCGCCCTTATGG+TGG | - | chr6_3:7217957-7217976 | Msa0936480:intron | 65.0% | |
| GCAGTCACGGTGGAATGGCG+TGG | + | chr6_3:7218026-7218045 | None:intergenic | 65.0% | |
| GCACGACATGAGGGGCTCGA+TGG | + | chr6_3:7218485-7218504 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 7216887 | 7221848 | 7216887 | ID=Msa0936480;Name=Msa0936480 |
| chr6_3 | mRNA | 7216887 | 7221848 | 7216887 | ID=Msa0936480-mRNA-1;Parent=Msa0936480;Name=Msa0936480-mRNA-1;_AED=0.15;_eAED=0.15;_QI=219|0.83|1|1|1|1|7|189|277 |
| chr6_3 | exon | 7216887 | 7217389 | 7216887 | ID=Msa0936480-mRNA-1:exon:2369;Parent=Msa0936480-mRNA-1 |
| chr6_3 | exon | 7218023 | 7218083 | 7218023 | ID=Msa0936480-mRNA-1:exon:2368;Parent=Msa0936480-mRNA-1 |
| chr6_3 | exon | 7218184 | 7218359 | 7218184 | ID=Msa0936480-mRNA-1:exon:2367;Parent=Msa0936480-mRNA-1 |
| chr6_3 | exon | 7218444 | 7218501 | 7218444 | ID=Msa0936480-mRNA-1:exon:2366;Parent=Msa0936480-mRNA-1 |
| chr6_3 | exon | 7221195 | 7221252 | 7221195 | ID=Msa0936480-mRNA-1:exon:2365;Parent=Msa0936480-mRNA-1 |
| chr6_3 | exon | 7221358 | 7221429 | 7221358 | ID=Msa0936480-mRNA-1:exon:2364;Parent=Msa0936480-mRNA-1 |
| chr6_3 | exon | 7221535 | 7221848 | 7221535 | ID=Msa0936480-mRNA-1:exon:2363;Parent=Msa0936480-mRNA-1 |
| chr6_3 | five_prime_UTR | 7221630 | 7221848 | 7221630 | ID=Msa0936480-mRNA-1:five_prime_utr;Parent=Msa0936480-mRNA-1 |
| chr6_3 | CDS | 7221535 | 7221629 | 7221535 | ID=Msa0936480-mRNA-1:cds;Parent=Msa0936480-mRNA-1 |
| chr6_3 | CDS | 7221358 | 7221429 | 7221358 | ID=Msa0936480-mRNA-1:cds;Parent=Msa0936480-mRNA-1 |
| chr6_3 | CDS | 7221195 | 7221252 | 7221195 | ID=Msa0936480-mRNA-1:cds;Parent=Msa0936480-mRNA-1 |
| chr6_3 | CDS | 7218444 | 7218501 | 7218444 | ID=Msa0936480-mRNA-1:cds;Parent=Msa0936480-mRNA-1 |
| chr6_3 | CDS | 7218184 | 7218359 | 7218184 | ID=Msa0936480-mRNA-1:cds;Parent=Msa0936480-mRNA-1 |
| chr6_3 | CDS | 7218023 | 7218083 | 7218023 | ID=Msa0936480-mRNA-1:cds;Parent=Msa0936480-mRNA-1 |
| chr6_3 | CDS | 7217076 | 7217389 | 7217076 | ID=Msa0936480-mRNA-1:cds;Parent=Msa0936480-mRNA-1 |
| chr6_3 | three_prime_UTR | 7216887 | 7217075 | 7216887 | ID=Msa0936480-mRNA-1:three_prime_utr;Parent=Msa0936480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
