Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369660 | XP_003601018.2 | 98.630 | 438 | 6 | 0 | 1 | 438 | 1 | 438 | 0.0 | 858 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369660 | sp|Q9LYM2|AVT6C_ARATH | 59.069 | 408 | 167 | 0 | 25 | 432 | 24 | 431 | 3.49e-173 | 495 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369660 | G7J2G3 | 98.630 | 438 | 6 | 0 | 1 | 438 | 1 | 438 | 0.0 | 858 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa0369660 | -0.810361 | 1.197812e-50 | -8.615850e-47 |
| Msa0003370 | Msa0369660 | -0.828210 | 1.020527e-54 | -8.615850e-47 |
| Msa0025060 | Msa0369660 | -0.822043 | 2.925174e-53 | -8.615850e-47 |
| Msa0025340 | Msa0369660 | -0.805658 | 1.200491e-49 | -8.615850e-47 |
| Msa0028410 | Msa0369660 | -0.816786 | 4.622189e-52 | -8.615850e-47 |
| Msa0028450 | Msa0369660 | -0.833024 | 6.763303e-56 | -8.615850e-47 |
| Msa0030710 | Msa0369660 | -0.814946 | 1.188983e-51 | -8.615850e-47 |
| Msa0032040 | Msa0369660 | -0.806864 | 6.688565e-50 | -8.615850e-47 |
| Msa0033970 | Msa0369660 | 0.800639 | 1.311280e-48 | -8.615850e-47 |
| Msa0034590 | Msa0369660 | -0.804227 | 2.390374e-49 | -8.615850e-47 |
| Msa0034800 | Msa0369660 | -0.830157 | 3.438898e-55 | -8.615850e-47 |
| Msa0036560 | Msa0369660 | -0.816991 | 4.156886e-52 | -8.615850e-47 |
| Msa0042130 | Msa0369660 | -0.817304 | 3.534125e-52 | -8.615850e-47 |
| Msa0046090 | Msa0369660 | -0.810804 | 9.607743e-51 | -8.615850e-47 |
| Msa0050850 | Msa0369660 | -0.814027 | 1.898903e-51 | -8.615850e-47 |
| Msa0072910 | Msa0369660 | -0.802943 | 4.412655e-49 | -8.615850e-47 |
| Msa0079550 | Msa0369660 | -0.819370 | 1.203284e-52 | -8.615850e-47 |
| Msa0081920 | Msa0369660 | 0.821206 | 4.566521e-53 | -8.615850e-47 |
| Msa0089410 | Msa0369660 | -0.803070 | 4.154279e-49 | -8.615850e-47 |
| Msa0093830 | Msa0369660 | -0.801424 | 9.064215e-49 | -8.615850e-47 |
| Msa0097470 | Msa0369660 | -0.801506 | 8.720440e-49 | -8.615850e-47 |
| Msa0097490 | Msa0369660 | -0.800568 | 1.356068e-48 | -8.615850e-47 |
| Msa0114960 | Msa0369660 | -0.826327 | 2.883784e-54 | -8.615850e-47 |
| Msa0118250 | Msa0369660 | -0.818054 | 2.394939e-52 | -8.615850e-47 |
| Msa0121080 | Msa0369660 | -0.820138 | 8.035822e-53 | -8.615850e-47 |
| Msa0124070 | Msa0369660 | -0.831327 | 1.777373e-55 | -8.615850e-47 |
| Msa0128030 | Msa0369660 | 0.810080 | 1.376789e-50 | -8.615850e-47 |
| Msa0136040 | Msa0369660 | -0.823003 | 1.750394e-53 | -8.615850e-47 |
| Msa0136520 | Msa0369660 | -0.809566 | 1.775821e-50 | -8.615850e-47 |
| Msa0138340 | Msa0369660 | -0.828429 | 9.034046e-55 | -8.615850e-47 |
| Msa0139280 | Msa0369660 | -0.815762 | 7.831037e-52 | -8.615850e-47 |
| Msa0146570 | Msa0369660 | -0.834717 | 2.550353e-56 | -8.615850e-47 |
| Msa0147070 | Msa0369660 | -0.803377 | 3.589584e-49 | -8.615850e-47 |
| Msa0147960 | Msa0369660 | -0.832206 | 1.078755e-55 | -8.615850e-47 |
| Msa0160080 | Msa0369660 | -0.811245 | 7.709171e-51 | -8.615850e-47 |
| Msa0164310 | Msa0369660 | -0.805456 | 1.323108e-49 | -8.615850e-47 |
| Msa0164580 | Msa0369660 | -0.801278 | 9.709364e-49 | -8.615850e-47 |
| Msa0170550 | Msa0369660 | -0.807280 | 5.460413e-50 | -8.615850e-47 |
| Msa0174800 | Msa0369660 | -0.811769 | 5.931546e-51 | -8.615850e-47 |
| Msa0176610 | Msa0369660 | -0.820891 | 5.396348e-53 | -8.615850e-47 |
| Msa0177570 | Msa0369660 | -0.813511 | 2.466450e-51 | -8.615850e-47 |
| Msa0184320 | Msa0369660 | 0.832963 | 7.001528e-56 | -8.615850e-47 |
| Msa0186380 | Msa0369660 | -0.832142 | 1.118949e-55 | -8.615850e-47 |
| Msa0190400 | Msa0369660 | -0.818705 | 1.705044e-52 | -8.615850e-47 |
| Msa0191470 | Msa0369660 | 0.843034 | 1.795803e-58 | -8.615850e-47 |
| Msa0192890 | Msa0369660 | 0.808058 | 3.732880e-50 | -8.615850e-47 |
| Msa0206600 | Msa0369660 | -0.801980 | 6.968518e-49 | -8.615850e-47 |
| Msa0219140 | Msa0369660 | -0.823212 | 1.564009e-53 | -8.615850e-47 |
| Msa0224980 | Msa0369660 | -0.821033 | 5.006649e-53 | -8.615850e-47 |
| Msa0225030 | Msa0369660 | -0.821810 | 3.312845e-53 | -8.615850e-47 |
| Msa0225050 | Msa0369660 | -0.813179 | 2.917305e-51 | -8.615850e-47 |
| Msa0236100 | Msa0369660 | -0.820189 | 7.823099e-53 | -8.615850e-47 |
| Msa0238140 | Msa0369660 | 0.812245 | 4.672407e-51 | -8.615850e-47 |
| Msa0365350 | Msa0369660 | -0.823044 | 1.711747e-53 | -8.615850e-47 |
| Msa0367350 | Msa0369660 | 0.819804 | 9.581115e-53 | -8.615850e-47 |
| Msa0368620 | Msa0369660 | 0.830909 | 2.251324e-55 | -8.615850e-47 |
| Msa0369660 | Msa0371050 | -0.808579 | 2.889830e-50 | -8.615850e-47 |
| Msa0369660 | Msa0378390 | 0.801270 | 9.744886e-49 | -8.615850e-47 |
| Msa0369660 | Msa0378570 | -0.817764 | 2.784167e-52 | -8.615850e-47 |
| Msa0369660 | Msa0383110 | -0.816352 | 5.779706e-52 | -8.615850e-47 |
| Msa0369660 | Msa0385870 | -0.833186 | 6.162048e-56 | -8.615850e-47 |
| Msa0369660 | Msa0386390 | -0.836112 | 1.132555e-56 | -8.615850e-47 |
| Msa0369660 | Msa0387180 | 0.836366 | 9.758972e-57 | -8.615850e-47 |
| Msa0369660 | Msa0387300 | 0.818069 | 2.375888e-52 | -8.615850e-47 |
| Msa0369660 | Msa0389710 | 0.830182 | 3.391263e-55 | -8.615850e-47 |
| Msa0369660 | Msa0390350 | -0.811940 | 5.443342e-51 | -8.615850e-47 |
| Msa0369660 | Msa0403670 | -0.809501 | 1.834448e-50 | -8.615850e-47 |
| Msa0369660 | Msa0405040 | -0.809081 | 2.256571e-50 | -8.615850e-47 |
| Msa0369660 | Msa0415860 | -0.807565 | 4.749777e-50 | -8.615850e-47 |
| Msa0369660 | Msa0416040 | 0.813842 | 2.085525e-51 | -8.615850e-47 |
| Msa0369660 | Msa0417060 | 0.937600 | 2.660628e-98 | -8.615850e-47 |
| Msa0369660 | Msa0421690 | 0.838521 | 2.737256e-57 | -8.615850e-47 |
| Msa0369660 | Msa0423690 | 0.815235 | 1.025541e-51 | -8.615850e-47 |
| Msa0369660 | Msa0424930 | -0.824487 | 7.858912e-54 | -8.615850e-47 |
| Msa0369660 | Msa0427740 | 0.807469 | 4.977827e-50 | -8.615850e-47 |
| Msa0369660 | Msa0427850 | 0.812760 | 3.604333e-51 | -8.615850e-47 |
| Msa0369660 | Msa0431310 | -0.810405 | 1.171869e-50 | -8.615850e-47 |
| Msa0369660 | Msa0432390 | -0.818371 | 2.029653e-52 | -8.615850e-47 |
| Msa0369660 | Msa0434140 | 0.837237 | 5.853140e-57 | -8.615850e-47 |
| Msa0369660 | Msa0436430 | -0.818684 | 1.724264e-52 | -8.615850e-47 |
| Msa0369660 | Msa0463890 | 0.961807 | 3.929186e-120 | -8.615850e-47 |
| Msa0369660 | Msa0465420 | 0.807169 | 5.762624e-50 | -8.615850e-47 |
| Msa0369660 | Msa0468050 | 0.820962 | 5.198393e-53 | -8.615850e-47 |
| Msa0369660 | Msa0470440 | 0.808478 | 3.036186e-50 | -8.615850e-47 |
| Msa0369660 | Msa0474080 | 0.800274 | 1.556351e-48 | -8.615850e-47 |
| Msa0369660 | Msa0475080 | -0.825374 | 4.854501e-54 | -8.615850e-47 |
| Msa0369660 | Msa0477660 | 0.839761 | 1.306272e-57 | -8.615850e-47 |
| Msa0369660 | Msa0479790 | -0.834886 | 2.312913e-56 | -8.615850e-47 |
| Msa0369660 | Msa0480260 | 0.833423 | 5.378907e-56 | -8.615850e-47 |
| Msa0369660 | Msa0481580 | -0.833478 | 5.210714e-56 | -8.615850e-47 |
| Msa0369660 | Msa0482020 | -0.800326 | 1.518957e-48 | -8.615850e-47 |
| Msa0369660 | Msa0482360 | 0.837888 | 3.984931e-57 | -8.615850e-47 |
| Msa0369660 | Msa0484240 | 0.831782 | 1.373344e-55 | -8.615850e-47 |
| Msa0369660 | Msa0498320 | -0.846788 | 1.742411e-59 | -8.615850e-47 |
| Msa0369660 | Msa0508160 | 0.831210 | 1.898860e-55 | -8.615850e-47 |
| Msa0369660 | Msa0509420 | 0.832466 | 9.304262e-56 | -8.615850e-47 |
| Msa0369660 | Msa0511280 | 0.800139 | 1.657691e-48 | -8.615850e-47 |
| Msa0369660 | Msa0511380 | 0.802712 | 4.926433e-49 | -8.615850e-47 |
| Msa0369660 | Msa0513500 | -0.818883 | 1.553671e-52 | -8.615850e-47 |
| Msa0369660 | Msa0518570 | 0.811003 | 8.698197e-51 | -8.615850e-47 |
| Msa0369660 | Msa0521720 | 0.840102 | 1.064350e-57 | -8.615850e-47 |
| Msa0369660 | Msa0523400 | -0.822748 | 2.006713e-53 | -8.615850e-47 |
| Msa0369660 | Msa0524570 | -0.811607 | 6.434389e-51 | -8.615850e-47 |
| Msa0369660 | Msa0525460 | 0.810610 | 1.057962e-50 | -8.615850e-47 |
| Msa0369660 | Msa0527210 | -0.829936 | 3.895234e-55 | -8.615850e-47 |
| Msa0369660 | Msa0532310 | 0.811270 | 7.612770e-51 | -8.615850e-47 |
| Msa0369660 | Msa0532910 | -0.828097 | 1.086546e-54 | -8.615850e-47 |
| Msa0369660 | Msa0533140 | -0.824328 | 8.564958e-54 | -8.615850e-47 |
| Msa0369660 | Msa0550820 | -0.812494 | 4.122171e-51 | -8.615850e-47 |
| Msa0369660 | Msa0553940 | -0.808229 | 3.432025e-50 | -8.615850e-47 |
| Msa0369660 | Msa0565930 | -0.829040 | 6.430065e-55 | -8.615850e-47 |
| Msa0369660 | Msa0568810 | -0.806172 | 9.358118e-50 | -8.615850e-47 |
| Msa0369660 | Msa0571220 | -0.806932 | 6.470440e-50 | -8.615850e-47 |
| Msa0369660 | Msa0572370 | -0.822165 | 2.741390e-53 | -8.615850e-47 |
| Msa0369660 | Msa0572700 | 0.835725 | 1.419617e-56 | -8.615850e-47 |
| Msa0369660 | Msa0583810 | -0.818352 | 2.049750e-52 | -8.615850e-47 |
| Msa0369660 | Msa0584250 | -0.804395 | 2.205200e-49 | -8.615850e-47 |
| Msa0369660 | Msa0585720 | -0.831598 | 1.524459e-55 | -8.615850e-47 |
| Msa0369660 | Msa0587060 | -0.823802 | 1.138392e-53 | -8.615850e-47 |
| Msa0369660 | Msa0592020 | 0.844544 | 7.079669e-59 | -8.615850e-47 |
| Msa0369660 | Msa0598610 | -0.855443 | 6.288040e-62 | -8.615850e-47 |
| Msa0369660 | Msa0598680 | -0.837902 | 3.951928e-57 | -8.615850e-47 |
| Msa0369660 | Msa0619450 | -0.805228 | 1.477564e-49 | -8.615850e-47 |
| Msa0369660 | Msa0619460 | -0.816845 | 4.482981e-52 | -8.615850e-47 |
| Msa0369660 | Msa0619520 | -0.801481 | 8.824714e-49 | -8.615850e-47 |
| Msa0369660 | Msa0621870 | -0.868364 | 6.897920e-66 | -8.615850e-47 |
| Msa0369660 | Msa0622190 | 0.824063 | 9.888987e-54 | -8.615850e-47 |
| Msa0369660 | Msa0622800 | -0.812836 | 3.468755e-51 | -8.615850e-47 |
| Msa0369660 | Msa0625900 | -0.820105 | 8.174789e-53 | -8.615850e-47 |
| Msa0369660 | Msa0648410 | -0.815378 | 9.535431e-52 | -8.615850e-47 |
| Msa0369660 | Msa0657260 | 0.807721 | 4.401100e-50 | -8.615850e-47 |
| Msa0369660 | Msa0659580 | -0.803711 | 3.059708e-49 | -8.615850e-47 |
| Msa0369660 | Msa0659590 | -0.807380 | 5.200028e-50 | -8.615850e-47 |
| Msa0369660 | Msa0660160 | -0.818770 | 1.648186e-52 | -8.615850e-47 |
| Msa0369660 | Msa0663580 | -0.837515 | 4.967136e-57 | -8.615850e-47 |
| Msa0369660 | Msa0663690 | -0.823730 | 1.183340e-53 | -8.615850e-47 |
| Msa0369660 | Msa0665010 | -0.823007 | 1.746001e-53 | -8.615850e-47 |
| Msa0369660 | Msa0667240 | 0.828663 | 7.930456e-55 | -8.615850e-47 |
| Msa0369660 | Msa0667710 | -0.824044 | 9.990463e-54 | -8.615850e-47 |
| Msa0369660 | Msa0677590 | -0.820429 | 6.893468e-53 | -8.615850e-47 |
| Msa0369660 | Msa0690920 | -0.815726 | 7.975014e-52 | -8.615850e-47 |
| Msa0369660 | Msa0692710 | -0.805612 | 1.227497e-49 | -8.615850e-47 |
| Msa0369660 | Msa0697230 | -0.805381 | 1.372220e-49 | -8.615850e-47 |
| Msa0369660 | Msa0701490 | 0.840318 | 9.343741e-58 | -8.615850e-47 |
| Msa0369660 | Msa0701560 | 0.844919 | 5.608834e-59 | -8.615850e-47 |
| Msa0369660 | Msa0703010 | 0.814923 | 1.203177e-51 | -8.615850e-47 |
| Msa0369660 | Msa0704750 | -0.804191 | 2.431871e-49 | -8.615850e-47 |
| Msa0369660 | Msa0712920 | 0.812040 | 5.178366e-51 | -8.615850e-47 |
| Msa0369660 | Msa0719160 | -0.818854 | 1.577646e-52 | -8.615850e-47 |
| Msa0369660 | Msa0721260 | 0.827335 | 1.656402e-54 | -8.615850e-47 |
| Msa0369660 | Msa0727230 | 0.829615 | 4.662830e-55 | -8.615850e-47 |
| Msa0369660 | Msa0735340 | 0.802645 | 5.084742e-49 | -8.615850e-47 |
| Msa0369660 | Msa0742690 | -0.801416 | 9.096224e-49 | -8.615850e-47 |
| Msa0369660 | Msa0743630 | -0.864528 | 1.139902e-64 | -8.615850e-47 |
| Msa0369660 | Msa0747500 | 0.815451 | 9.184669e-52 | -8.615850e-47 |
| Msa0369660 | Msa0748470 | -0.806108 | 9.653333e-50 | -8.615850e-47 |
| Msa0369660 | Msa0751510 | 0.809631 | 1.720310e-50 | -8.615850e-47 |
| Msa0369660 | Msa0753410 | 0.853893 | 1.768166e-61 | -8.615850e-47 |
| Msa0369660 | Msa0758000 | 0.802263 | 6.096272e-49 | -8.615850e-47 |
| Msa0369660 | Msa0761930 | -0.806166 | 9.387178e-50 | -8.615850e-47 |
| Msa0369660 | Msa0762480 | -0.804725 | 1.881997e-49 | -8.615850e-47 |
| Msa0369660 | Msa0766540 | -0.812425 | 4.267921e-51 | -8.615850e-47 |
| Msa0369660 | Msa0766900 | -0.802680 | 5.000627e-49 | -8.615850e-47 |
| Msa0369660 | Msa0777210 | 0.810460 | 1.140332e-50 | -8.615850e-47 |
| Msa0369660 | Msa0779830 | -0.800568 | 1.356230e-48 | -8.615850e-47 |
| Msa0369660 | Msa0788490 | -0.825152 | 5.476539e-54 | -8.615850e-47 |
| Msa0369660 | Msa0795330 | 0.841073 | 5.927533e-58 | -8.615850e-47 |
| Msa0369660 | Msa0814350 | 0.802109 | 6.556601e-49 | -8.615850e-47 |
| Msa0369660 | Msa0824750 | -0.857643 | 1.419600e-62 | -8.615850e-47 |
| Msa0369660 | Msa0827560 | -0.808423 | 3.120369e-50 | -8.615850e-47 |
| Msa0369660 | Msa0842370 | -0.804751 | 1.858217e-49 | -8.615850e-47 |
| Msa0369660 | Msa0846180 | -0.817970 | 2.501966e-52 | -8.615850e-47 |
| Msa0369660 | Msa0854860 | 0.825045 | 5.806752e-54 | -8.615850e-47 |
| Msa0369660 | Msa0856790 | -0.812525 | 4.058325e-51 | -8.615850e-47 |
| Msa0369660 | Msa0862750 | -0.801235 | 9.908183e-49 | -8.615850e-47 |
| Msa0369660 | Msa0863780 | -0.863108 | 3.149106e-64 | -8.615850e-47 |
| Msa0369660 | Msa0865830 | 0.800736 | 1.252884e-48 | -8.615850e-47 |
| Msa0369660 | Msa0871910 | -0.809747 | 1.624258e-50 | -8.615850e-47 |
| Msa0369660 | Msa0875130 | -0.824405 | 8.215305e-54 | -8.615850e-47 |
| Msa0369660 | Msa0879820 | -0.810220 | 1.284506e-50 | -8.615850e-47 |
| Msa0369660 | Msa0880200 | -0.807590 | 4.691654e-50 | -8.615850e-47 |
| Msa0369660 | Msa0880370 | -0.829074 | 6.308575e-55 | -8.615850e-47 |
| Msa0369660 | Msa0882340 | -0.809909 | 1.499106e-50 | -8.615850e-47 |
| Msa0369660 | Msa0882360 | 0.818971 | 1.483356e-52 | -8.615850e-47 |
| Msa0369660 | Msa0883880 | -0.815964 | 7.058659e-52 | -8.615850e-47 |
| Msa0369660 | Msa0896990 | 0.809281 | 2.045215e-50 | -8.615850e-47 |
| Msa0369660 | Msa0907520 | -0.822064 | 2.892882e-53 | -8.615850e-47 |
| Msa0369660 | Msa0911440 | -0.803047 | 4.201125e-49 | -8.615850e-47 |
| Msa0369660 | Msa0911490 | -0.806216 | 9.159515e-50 | -8.615850e-47 |
| Msa0369660 | Msa0917630 | -0.803457 | 3.455265e-49 | -8.615850e-47 |
| Msa0369660 | Msa0930150 | -0.806969 | 6.352672e-50 | -8.615850e-47 |
| Msa0369660 | Msa0932040 | -0.842621 | 2.311842e-58 | -8.615850e-47 |
| Msa0369660 | Msa0932050 | -0.803437 | 3.487146e-49 | -8.615850e-47 |
| Msa0369660 | Msa0933050 | -0.823549 | 1.304391e-53 | -8.615850e-47 |
| Msa0369660 | Msa0933500 | -0.811928 | 5.476223e-51 | -8.615850e-47 |
| Msa0369660 | Msa0937270 | -0.811998 | 5.288613e-51 | -8.615850e-47 |
| Msa0369660 | Msa0946570 | -0.821525 | 3.854997e-53 | -8.615850e-47 |
| Msa0369660 | Msa0947420 | 0.812303 | 4.536740e-51 | -8.615850e-47 |
| Msa0369660 | Msa0970160 | -0.839545 | 1.486425e-57 | -8.615850e-47 |
| Msa0369660 | Msa0970940 | -0.822016 | 2.967954e-53 | -8.615850e-47 |
| Msa0369660 | Msa0974570 | -0.801837 | 7.458625e-49 | -8.615850e-47 |
| Msa0369660 | Msa0976950 | -0.830718 | 2.508132e-55 | -8.615850e-47 |
| Msa0369660 | Msa0982340 | 0.809831 | 1.557948e-50 | -8.615850e-47 |
| Msa0369660 | Msa1014530 | -0.853596 | 2.151894e-61 | -8.615850e-47 |
| Msa0369660 | Msa1015020 | -0.817508 | 3.179612e-52 | -8.615850e-47 |
| Msa0369660 | Msa1030380 | 0.803082 | 4.131437e-49 | -8.615850e-47 |
| Msa0369660 | Msa1031620 | -0.805259 | 1.455461e-49 | -8.615850e-47 |
| Msa0369660 | Msa1034870 | 0.823593 | 1.274233e-53 | -8.615850e-47 |
| Msa0369660 | Msa1038040 | -0.818137 | 2.293735e-52 | -8.615850e-47 |
| Msa0369660 | Msa1039730 | 0.801518 | 8.668760e-49 | -8.615850e-47 |
| Msa0369660 | Msa1040030 | -0.805845 | 1.096587e-49 | -8.615850e-47 |
| Msa0369660 | Msa1041620 | -0.855397 | 6.484353e-62 | -8.615850e-47 |
| Msa0369660 | Msa1049850 | 0.809556 | 1.785093e-50 | -8.615850e-47 |
| Msa0369660 | Msa1055490 | -0.828356 | 9.410863e-55 | -8.615850e-47 |
| Msa0369660 | Msa1056790 | -0.803962 | 2.714061e-49 | -8.615850e-47 |
| Msa0369660 | Msa1077940 | 0.810982 | 8.790463e-51 | -8.615850e-47 |
| Msa0369660 | Msa1081650 | -0.854050 | 1.592831e-61 | -8.615850e-47 |
| Msa0369660 | Msa1093250 | -0.808915 | 2.449110e-50 | -8.615850e-47 |
| Msa0369660 | Msa1096280 | -0.836768 | 7.711546e-57 | -8.615850e-47 |
| Msa0369660 | Msa1101480 | -0.805888 | 1.073679e-49 | -8.615850e-47 |
| Msa0369660 | Msa1107510 | 0.805750 | 1.148303e-49 | -8.615850e-47 |
| Msa0369660 | Msa1118890 | -0.813729 | 2.209261e-51 | -8.615850e-47 |
| Msa0369660 | Msa1126980 | -0.814710 | 1.341240e-51 | -8.615850e-47 |
| Msa0369660 | Msa1129540 | 0.813384 | 2.630478e-51 | -8.615850e-47 |
| Msa0369660 | Msa1134830 | -0.803879 | 2.823426e-49 | -8.615850e-47 |
| Msa0369660 | Msa1136770 | -0.807621 | 4.622097e-50 | -8.615850e-47 |
| Msa0369660 | Msa1157200 | 0.840093 | 1.069821e-57 | -8.615850e-47 |
| Msa0369660 | Msa1158540 | -0.807987 | 3.864911e-50 | -8.615850e-47 |
| Msa0369660 | Msa1164670 | 0.815865 | 7.428017e-52 | -8.615850e-47 |
| Msa0369660 | Msa1166520 | -0.846774 | 1.758854e-59 | -8.615850e-47 |
| Msa0369660 | Msa1174450 | 0.852112 | 5.716178e-61 | -8.615850e-47 |
| Msa0369660 | Msa1177300 | -0.803754 | 2.997716e-49 | -8.615850e-47 |
| Msa0369660 | Msa1187160 | 0.836293 | 1.018544e-56 | -8.615850e-47 |
| Msa0369660 | Msa1192790 | -0.811002 | 8.705224e-51 | -8.615850e-47 |
| Msa0369660 | Msa1197210 | -0.815622 | 8.410987e-52 | -8.615850e-47 |
| Msa0369660 | Msa1198280 | -0.834755 | 2.494147e-56 | -8.615850e-47 |
| Msa0369660 | Msa1207000 | 0.817444 | 3.286941e-52 | -8.615850e-47 |
| Msa0369660 | Msa1207090 | 0.807138 | 5.851187e-50 | -8.615850e-47 |
| Msa0369660 | Msa1209390 | -0.800156 | 1.644914e-48 | -8.615850e-47 |
| Msa0369660 | Msa1209650 | -0.811754 | 5.976635e-51 | -8.615850e-47 |
| Msa0369660 | Msa1223520 | -0.808765 | 2.636616e-50 | -8.615850e-47 |
| Msa0369660 | Msa1223600 | -0.852524 | 4.364355e-61 | -8.615850e-47 |
| Msa0369660 | Msa1224310 | -0.808894 | 2.474332e-50 | -8.615850e-47 |
| Msa0369660 | Msa1227090 | -0.815973 | 7.026232e-52 | -8.615850e-47 |
| Msa0369660 | Msa1228600 | -0.803784 | 2.954706e-49 | -8.615850e-47 |
| Msa0369660 | Msa1229880 | -0.843165 | 1.657482e-58 | -8.615850e-47 |
| Msa0369660 | Msa1235960 | -0.842135 | 3.111188e-58 | -8.615850e-47 |
| Msa0369660 | Msa1235990 | -0.850930 | 1.235058e-60 | -8.615850e-47 |
| Msa0369660 | Msa1236090 | -0.818484 | 1.913605e-52 | -8.615850e-47 |
| Msa0369660 | Msa1239190 | 0.816794 | 4.601188e-52 | -8.615850e-47 |
| Msa0369660 | Msa1251830 | -0.814712 | 1.339671e-51 | -8.615850e-47 |
| Msa0369660 | Msa1251890 | -0.844274 | 8.370100e-59 | -8.615850e-47 |
| Msa0369660 | Msa1252220 | -0.860757 | 1.653758e-63 | -8.615850e-47 |
| Msa0369660 | Msa1257170 | 0.815406 | 9.395245e-52 | -8.615850e-47 |
| Msa0369660 | Msa1258600 | 0.865714 | 4.832361e-65 | -8.615850e-47 |
| Msa0369660 | Msa1258770 | -0.803541 | 3.318561e-49 | -8.615850e-47 |
| Msa0369660 | Msa1263460 | -0.800982 | 1.116249e-48 | -8.615850e-47 |
| Msa0369660 | Msa1263500 | 0.803582 | 3.254849e-49 | -8.615850e-47 |
| Msa0369660 | Msa1263600 | -0.806661 | 7.381995e-50 | -8.615850e-47 |
| Msa0369660 | Msa1265990 | -0.870529 | 1.362164e-66 | -8.615850e-47 |
| Msa0369660 | Msa1267800 | -0.841530 | 4.494720e-58 | -8.615850e-47 |
| Msa0369660 | Msa1269370 | -0.825923 | 3.597105e-54 | -8.615850e-47 |
| Msa0369660 | Msa1279240 | -0.804634 | 1.966116e-49 | -8.615850e-47 |
| Msa0369660 | Msa1282640 | 0.816138 | 6.454447e-52 | -8.615850e-47 |
| Msa0369660 | Msa1292560 | 0.828493 | 8.718965e-55 | -8.615850e-47 |
| Msa0369660 | Msa1293030 | -0.824536 | 7.655997e-54 | -8.615850e-47 |
| Msa0369660 | Msa1298440 | 0.876655 | 1.174816e-68 | -8.615850e-47 |
| Msa0369660 | Msa1298740 | -0.813720 | 2.218543e-51 | -8.615850e-47 |
| Msa0369660 | Msa1302120 | 0.820016 | 8.569281e-53 | -8.615850e-47 |
| Msa0369660 | Msa1304870 | 0.811784 | 5.886794e-51 | -8.615850e-47 |
| Msa0369660 | Msa1304980 | 0.839941 | 1.172528e-57 | -8.615850e-47 |
| Msa0369660 | Msa1310620 | -0.842762 | 2.121292e-58 | -8.615850e-47 |
| Msa0369660 | Msa1314810 | 0.832474 | 9.261860e-56 | -8.615850e-47 |
| Msa0369660 | Msa1316090 | -0.850542 | 1.587533e-60 | -8.615850e-47 |
| Msa0369660 | Msa1317090 | -0.821036 | 4.997594e-53 | -8.615850e-47 |
| Msa0369660 | Msa1327400 | -0.814291 | 1.660068e-51 | -8.615850e-47 |
| Msa0369660 | Msa1327420 | -0.812478 | 4.155690e-51 | -8.615850e-47 |
| Msa0369660 | Msa1331490 | -0.803383 | 3.578653e-49 | -8.615850e-47 |
| Msa0369660 | Msa1336130 | 0.833039 | 6.705009e-56 | -8.615850e-47 |
| Msa0369660 | Msa1339520 | -0.842554 | 2.408710e-58 | -8.615850e-47 |
| Msa0369660 | Msa1342460 | -0.810036 | 1.407202e-50 | -8.615850e-47 |
| Msa0369660 | Msa1344940 | -0.801493 | 8.772385e-49 | -8.615850e-47 |
| Msa0369660 | Msa1345390 | 0.815627 | 8.389879e-52 | -8.615850e-47 |
| Msa0369660 | Msa1348340 | -0.802662 | 5.044138e-49 | -8.615850e-47 |
| Msa0369660 | Msa1350350 | -0.806632 | 7.484300e-50 | -8.615850e-47 |
| Msa0369660 | Msa1356500 | -0.843367 | 1.463888e-58 | -8.615850e-47 |
| Msa0369660 | Msa1357090 | -0.821898 | 3.161129e-53 | -8.615850e-47 |
| Msa0369660 | Msa1357760 | -0.848420 | 6.201287e-60 | -8.615850e-47 |
| Msa0369660 | Msa1361090 | -0.836588 | 8.568941e-57 | -8.615850e-47 |
| Msa0369660 | Msa1368800 | -0.828909 | 6.916381e-55 | -8.615850e-47 |
| Msa0369660 | Msa1370830 | -0.813448 | 2.546678e-51 | -8.615850e-47 |
| Msa0369660 | Msa1371540 | -0.821889 | 3.176021e-53 | -8.615850e-47 |
| Msa0369660 | Msa1372570 | -0.825885 | 3.672635e-54 | -8.615850e-47 |
| Msa0369660 | Msa1375640 | 0.819706 | 1.008726e-52 | -8.615850e-47 |
| Msa0369660 | Msa1376520 | 0.838784 | 2.340249e-57 | -8.615850e-47 |
| Msa0369660 | Msa1378020 | 0.814913 | 1.209522e-51 | -8.615850e-47 |
| Msa0369660 | Msa1378840 | -0.823401 | 1.412637e-53 | -8.615850e-47 |
| Msa0369660 | Msa1379930 | -0.824186 | 9.250627e-54 | -8.615850e-47 |
| Msa0369660 | Msa1382100 | -0.801012 | 1.100485e-48 | -8.615850e-47 |
| Msa0369660 | Msa1386150 | 0.828520 | 8.589917e-55 | -8.615850e-47 |
| Msa0369660 | Msa1387650 | -0.800492 | 1.405192e-48 | -8.615850e-47 |
| Msa0369660 | Msa1395090 | 0.816594 | 5.103275e-52 | -8.615850e-47 |
| Msa0369660 | Msa1395700 | -0.812505 | 4.099697e-51 | -8.615850e-47 |
| Msa0369660 | Msa1397550 | -0.807066 | 6.059498e-50 | -8.615850e-47 |
| Msa0369660 | Msa1398110 | 0.822479 | 2.317011e-53 | -8.615850e-47 |
| Msa0369660 | Msa1398120 | 0.806273 | 8.909552e-50 | -8.615850e-47 |
| Msa0369660 | Msa1398150 | -0.803607 | 3.216374e-49 | -8.615850e-47 |
| Msa0369660 | Msa1400700 | 0.808496 | 3.010358e-50 | -8.615850e-47 |
| Msa0369660 | Msa1400940 | 0.869802 | 2.355622e-66 | -8.615850e-47 |
| Msa0369660 | Msa1408320 | 0.816056 | 6.731238e-52 | -8.615850e-47 |
| Msa0369660 | Msa1414790 | -0.806272 | 8.916903e-50 | -8.615850e-47 |
| Msa0369660 | Msa1418010 | -0.816544 | 5.235107e-52 | -8.615850e-47 |
| Msa0369660 | Msa1420630 | -0.827687 | 1.363016e-54 | -8.615850e-47 |
| Msa0369660 | Msa1425570 | -0.829098 | 6.224665e-55 | -8.615850e-47 |
| Msa0369660 | Msa1426690 | -0.801060 | 1.075973e-48 | -8.615850e-47 |
| Msa0369660 | Msa1428990 | -0.818854 | 1.576923e-52 | -8.615850e-47 |
| Msa0369660 | Msa1429190 | 0.823791 | 1.145375e-53 | -8.615850e-47 |
| Msa0369660 | Msa1431050 | 0.836153 | 1.105362e-56 | -8.615850e-47 |
| Msa0369660 | Msa1449470 | 0.803977 | 2.694441e-49 | -8.615850e-47 |
| Msa0369660 | Msa1449510 | -0.848966 | 4.376614e-60 | -8.615850e-47 |
| Msa0369660 | Msa1452080 | -0.811589 | 6.491432e-51 | -8.615850e-47 |
| Msa0369660 | Msa1453890 | 0.811309 | 7.467735e-51 | -8.615850e-47 |
| Msa0369660 | Msa1459930 | 0.818000 | 2.462965e-52 | -8.615850e-47 |
| Msa0369660 | Msa1465380 | -0.817447 | 3.281523e-52 | -8.615850e-47 |
| Msa0369660 | Msa1465950 | -0.805300 | 1.427048e-49 | -8.615850e-47 |
| Msa0369660 | Msa1466170 | -0.801734 | 7.830282e-49 | -8.615850e-47 |
| Msa0249670 | Msa0369660 | -0.837989 | 3.753953e-57 | -8.615850e-47 |
| Msa0258960 | Msa0369660 | -0.812603 | 3.900938e-51 | -8.615850e-47 |
| Msa0269660 | Msa0369660 | -0.805745 | 1.150781e-49 | -8.615850e-47 |
| Msa0274000 | Msa0369660 | -0.805298 | 1.428410e-49 | -8.615850e-47 |
| Msa0285510 | Msa0369660 | -0.814959 | 1.181066e-51 | -8.615850e-47 |
| Msa0305810 | Msa0369660 | -0.834935 | 2.247402e-56 | -8.615850e-47 |
| Msa0311130 | Msa0369660 | -0.825270 | 5.137631e-54 | -8.615850e-47 |
| Msa0312300 | Msa0369660 | 0.831245 | 1.861697e-55 | -8.615850e-47 |
| Msa0314620 | Msa0369660 | -0.805564 | 1.255863e-49 | -8.615850e-47 |
| Msa0314980 | Msa0369660 | -0.803231 | 3.848196e-49 | -8.615850e-47 |
| Msa0319060 | Msa0369660 | -0.814783 | 1.292502e-51 | -8.615850e-47 |
| Msa0327870 | Msa0369660 | -0.806428 | 8.266813e-50 | -8.615850e-47 |
| Msa0336550 | Msa0369660 | -0.811379 | 7.211190e-51 | -8.615850e-47 |
| Msa0341710 | Msa0369660 | -0.815413 | 9.364174e-52 | -8.615850e-47 |
| Msa0361040 | Msa0369660 | -0.805114 | 1.560973e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369660 | MtrunA17_Chr3g0114351 | 98.630 | 438 | 6 | 0 | 1 | 438 | 1 | 438 | 0.0 | 858 |
| Msa0369660 | MtrunA17_Chr5g0437961 | 73.412 | 425 | 113 | 0 | 8 | 432 | 3 | 427 | 0.0 | 648 |
| Msa0369660 | MtrunA17_Chr5g0437951 | 54.691 | 437 | 185 | 4 | 12 | 436 | 11 | 446 | 9.63e-173 | 491 |
| Msa0369660 | MtrunA17_Chr7g0220531 | 47.196 | 428 | 220 | 1 | 10 | 431 | 29 | 456 | 6.13e-137 | 401 |
| Msa0369660 | MtrunA17_Chr8g0366021 | 46.763 | 417 | 219 | 1 | 25 | 438 | 48 | 464 | 1.20e-129 | 382 |
| Msa0369660 | MtrunA17_Chr6g0455911 | 44.165 | 437 | 234 | 4 | 10 | 438 | 20 | 454 | 1.02e-120 | 359 |
| Msa0369660 | MtrunA17_Chr6g0455951 | 42.237 | 438 | 243 | 4 | 9 | 438 | 24 | 459 | 3.94e-119 | 355 |
| Msa0369660 | MtrunA17_Chr6g0455981 | 42.523 | 428 | 237 | 3 | 10 | 429 | 22 | 448 | 4.46e-119 | 355 |
| Msa0369660 | MtrunA17_Chr6g0455941 | 43.510 | 416 | 232 | 2 | 25 | 438 | 48 | 462 | 5.48e-115 | 345 |
| Msa0369660 | MtrunA17_Chr2g0333321 | 39.815 | 432 | 251 | 5 | 10 | 438 | 62 | 487 | 1.50e-107 | 327 |
| Msa0369660 | MtrunA17_Chr8g0366001 | 45.896 | 268 | 142 | 1 | 174 | 438 | 4 | 271 | 6.31e-78 | 243 |
| Msa0369660 | MtrunA17_Chr6g0459871 | 40.449 | 267 | 156 | 2 | 174 | 438 | 50 | 315 | 6.33e-61 | 201 |
| Msa0369660 | MtrunA17_Chr3g0114341 | 77.982 | 109 | 24 | 0 | 4 | 112 | 2 | 110 | 7.08e-49 | 162 |
| Msa0369660 | MtrunA17_Chr8g0365971 | 46.296 | 162 | 86 | 1 | 25 | 186 | 52 | 212 | 1.36e-39 | 141 |
| Msa0369660 | MtrunA17_Chr8g0365991 | 50.467 | 107 | 53 | 0 | 25 | 131 | 48 | 154 | 4.63e-25 | 101 |
| Msa0369660 | MtrunA17_Chr4g0022261 | 21.991 | 432 | 296 | 13 | 14 | 436 | 124 | 523 | 3.94e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369660 | AT3G56200.1 | 59.069 | 408 | 167 | 0 | 25 | 432 | 24 | 431 | 3.54e-174 | 495 |
| Msa0369660 | AT2G40420.1 | 58.237 | 431 | 175 | 2 | 6 | 431 | 2 | 432 | 5.32e-171 | 487 |
| Msa0369660 | AT3G30390.1 | 45.642 | 436 | 231 | 1 | 2 | 431 | 15 | 450 | 4.64e-132 | 389 |
| Msa0369660 | AT3G30390.3 | 45.642 | 436 | 231 | 1 | 2 | 431 | 15 | 450 | 4.64e-132 | 389 |
| Msa0369660 | AT3G30390.2 | 45.642 | 436 | 231 | 1 | 2 | 431 | 15 | 450 | 4.64e-132 | 389 |
| Msa0369660 | AT5G38820.1 | 44.393 | 428 | 230 | 2 | 12 | 431 | 17 | 444 | 1.83e-128 | 379 |
| Msa0369660 | AT5G38820.3 | 44.393 | 428 | 230 | 2 | 12 | 431 | 17 | 444 | 1.83e-128 | 379 |
| Msa0369660 | AT5G38820.2 | 44.393 | 428 | 230 | 2 | 12 | 431 | 22 | 449 | 2.61e-128 | 379 |
| Msa0369660 | AT1G80510.1 | 40.460 | 435 | 245 | 6 | 10 | 438 | 62 | 488 | 1.38e-97 | 301 |
| Msa0369660 | AT2G39130.2 | 23.611 | 432 | 271 | 13 | 19 | 435 | 155 | 542 | 8.11e-11 | 64.3 |
| Msa0369660 | AT2G39130.1 | 23.611 | 432 | 271 | 13 | 19 | 435 | 155 | 542 | 8.11e-11 | 64.3 |
Find 122 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTTACAATCGGTCTATT+TGG | 0.154949 | 3_1:+66998415 | Msa0369660:CDS |
| GCATTTGTTGCCATCTGTTC+TGG | 0.170280 | 3_1:+66998039 | Msa0369660:CDS |
| GTCATTATCTTGTCAAATAA+AGG | 0.232314 | 3_1:+66999399 | Msa0369660:three_prime_UTR |
| TGAAAGAAGTACCAAATATC+TGG | 0.234058 | 3_1:-66998712 | None:intergenic |
| GGTTCTAACCAATGATAATT+AGG | 0.245044 | 3_1:-66997214 | None:intergenic |
| GTGGCTAGCAGAGGCTTCTT+AGG | 0.255194 | 3_1:-66998619 | None:intergenic |
| TGGTACTTCTTTCAGTTTCT+AGG | 0.268753 | 3_1:+66998721 | Msa0369660:CDS |
| TCTAATCGAGGAACCAGTTT+AGG | 0.280409 | 3_1:-66998102 | None:intergenic |
| TCAAATCCGGCGGCGGTTCC+TGG | 0.299360 | 3_1:+66996909 | Msa0369660:CDS |
| CTATAGCAATCCCAGATATT+TGG | 0.301975 | 3_1:+66998701 | Msa0369660:CDS |
| GTGTTATAATCACAAACTTT+GGG | 0.314828 | 3_1:+66997177 | Msa0369660:CDS |
| AACAGTGGTTTGGGGTTCAT+TGG | 0.328083 | 3_1:+66997560 | Msa0369660:CDS |
| TGGGTTGGCTGTTGTTGCTT+TGG | 0.328665 | 3_1:+66998059 | Msa0369660:CDS |
| GGGGAGTTGGGGCGTGGAAG+GGG | 0.330652 | 3_1:+66999118 | Msa0369660:three_prime_UTR |
| CTAATCGAGGAACCAGTTTA+GGG | 0.333126 | 3_1:-66998101 | None:intergenic |
| TTACTTGCAGTACATCCTAT+TGG | 0.338534 | 3_1:+66998322 | Msa0369660:intron |
| TACTTGCAGTACATCCTATT+GGG | 0.340851 | 3_1:+66998323 | Msa0369660:intron |
| CATTTGTTGCCATCTGTTCT+GGG | 0.345258 | 3_1:+66998040 | Msa0369660:CDS |
| CTCAAAGAGAAATTTATAAG+AGG | 0.349290 | 3_1:-66998571 | None:intergenic |
| GGTTCTTGTTATGCTTCCTT+TGG | 0.349741 | 3_1:+66997618 | Msa0369660:CDS |
| GGTGTTATGAAGGAAGCTTT+TGG | 0.378184 | 3_1:+66997125 | Msa0369660:CDS |
| GCATTCACATTTCATTTCAA+TGG | 0.380536 | 3_1:+66998177 | Msa0369660:CDS |
| GTTCTCTTCCTAATTATCAT+TGG | 0.381754 | 3_1:+66997206 | Msa0369660:CDS |
| CAGAAACGTGTGACAAAGTT+GGG | 0.381818 | 3_1:+66999268 | Msa0369660:three_prime_UTR |
| ACAAAATTCATATAAATAGA+TGG | 0.383381 | 3_1:+66996766 | None:intergenic |
| CTCCGGAATCATGTCAATTC+CGG | 0.385246 | 3_1:+66996977 | Msa0369660:CDS |
| TGTGTTATAATCACAAACTT+TGG | 0.385504 | 3_1:+66997176 | Msa0369660:CDS |
| AATGTCGCCACCAGCATAAT+CGG | 0.388972 | 3_1:+66996954 | Msa0369660:CDS |
| GAATCCTTGAAGTACAGTTC+TGG | 0.395671 | 3_1:+66997994 | Msa0369660:intron |
| CGCCGGAATTGACATGATTC+CGG | 0.403675 | 3_1:-66996979 | None:intergenic |
| TATTCCAGAACTGTACTTCA+AGG | 0.410500 | 3_1:-66997998 | None:intergenic |
| GCAGAGGCTTCTTAGGGAAT+AGG | 0.417972 | 3_1:-66998612 | None:intergenic |
| GGGTTCATTGGTGGAATTCA+AGG | 0.420529 | 3_1:+66997572 | Msa0369660:CDS |
| GATTGCTATAGCAGCAAGAT+AGG | 0.434216 | 3_1:-66998689 | None:intergenic |
| CCGGCGATTCTCAAAGTTCT+CGG | 0.438035 | 3_1:+66996996 | Msa0369660:CDS |
| CAGAATGCTGATTCTGCTGT+TGG | 0.441483 | 3_1:+66998490 | Msa0369660:CDS |
| AGAAAGCAACAACAAAAGAA+TGG | 0.451699 | 3_1:-66999075 | None:intergenic |
| TCATTATCTTGTCAAATAAA+GGG | 0.451856 | 3_1:+66999400 | Msa0369660:three_prime_UTR |
| GCGGTTCCTGGTTCAATCCC+TGG | 0.452034 | 3_1:+66996921 | Msa0369660:CDS |
| AACAGCCAACCCAGAACAGA+TGG | 0.458807 | 3_1:-66998049 | None:intergenic |
| TGTTGCCATCTGTTCTGGGT+TGG | 0.462578 | 3_1:+66998044 | Msa0369660:CDS |
| GCGACATTGAATACGGCGCC+AGG | 0.467060 | 3_1:-66996939 | None:intergenic |
| CTTGCAAGCTCAAACCCAAT+AGG | 0.469781 | 3_1:-66998337 | None:intergenic |
| ACAAATCAAAGAATGATGTT+TGG | 0.480585 | 3_1:-66998128 | None:intergenic |
| TAAGTAGCAAGTCATAAAGT+TGG | 0.482289 | 3_1:+66999040 | Msa0369660:exon |
| AACCGCCGCCGGATTTGATC+CGG | 0.483830 | 3_1:-66996904 | None:intergenic |
| GCTGTTGTTGCTTTGGTGCA+AGG | 0.485497 | 3_1:+66998066 | Msa0369660:CDS |
| GAAAGCAACAACAAAAGAAT+GGG | 0.486157 | 3_1:-66999074 | None:intergenic |
| GAGAGTTGAGAAAGGAAATG+TGG | 0.487737 | 3_1:-66996818 | None:intergenic |
| AGTGGTTTGGGGTTCATTGG+TGG | 0.490922 | 3_1:+66997563 | Msa0369660:CDS |
| TACCTTAAAACAATAGTGCC+AGG | 0.490928 | 3_1:-66998778 | None:intergenic |
| TAAAGGGTCCCATGCGATGA+TGG | 0.491518 | 3_1:+66999416 | Msa0369660:three_prime_UTR |
| TGGCTAGCAGAGGCTTCTTA+GGG | 0.492601 | 3_1:-66998618 | None:intergenic |
| GTGAATGCTGTGACTACAAC+AGG | 0.493679 | 3_1:-66998162 | None:intergenic |
| GCTGTAGTCTACTTTACAAT+CGG | 0.495082 | 3_1:+66998406 | Msa0369660:CDS |
| GGTGTAACCACGACGTACTC+TGG | 0.498670 | 3_1:+66997104 | Msa0369660:CDS |
| ATCAACAACAGCACTATGCC+TGG | 0.499325 | 3_1:+66998744 | Msa0369660:CDS |
| AAGTGGAGGTGAAGTGCACT+TGG | 0.500293 | 3_1:+66997528 | Msa0369660:CDS |
| ATAAGAATCAAGGCGAAAGA+AGG | 0.506142 | 3_1:-66997026 | None:intergenic |
| TAAAGCATTGTATATGTTGG+TGG | 0.512729 | 3_1:-66999019 | None:intergenic |
| TCTCTTGACCGGATCAAATC+CGG | 0.513994 | 3_1:+66996896 | Msa0369660:CDS |
| GCTGGTGGCGACATTGAATA+CGG | 0.515321 | 3_1:-66996946 | None:intergenic |
| TCTAATGACAGGGATGCTCT+TGG | 0.515706 | 3_1:+66998919 | Msa0369660:intron |
| TTCTTATTACCATCATCGCA+TGG | 0.519491 | 3_1:-66999425 | None:intergenic |
| CACAACCAACAAAATGAGCC+TGG | 0.520269 | 3_1:-66999149 | None:intergenic |
| GTCAACGTCCCTCTCTTGAC+CGG | 0.521264 | 3_1:+66996885 | Msa0369660:CDS |
| GAGAAAATCAACAGAAACTT+CGG | 0.523044 | 3_1:-66997063 | None:intergenic |
| ACAGAAACGTGTGACAAAGT+TGG | 0.523459 | 3_1:+66999267 | Msa0369660:three_prime_UTR |
| GAAAGAAGTACCAAATATCT+GGG | 0.527104 | 3_1:-66998711 | None:intergenic |
| ATACTAACTAGCTAGGTTCA+CGG | 0.528827 | 3_1:-66999334 | None:intergenic |
| GACCGGATCAAATCCGGCGG+CGG | 0.531549 | 3_1:+66996902 | Msa0369660:CDS |
| AACAGAAACTTCGGCGAGCA+CGG | 0.535273 | 3_1:-66997054 | None:intergenic |
| TTATTTGACAAGATAATGAC+AGG | 0.536409 | 3_1:-66999396 | None:intergenic |
| TTAAACAATACTAACTAGCT+AGG | 0.536478 | 3_1:-66999341 | None:intergenic |
| GAATAGGAGTTCATCAATGT+TGG | 0.539647 | 3_1:-66998596 | None:intergenic |
| GTGTTGAATCTCCAAACAAA+AGG | 0.542964 | 3_1:-66998441 | None:intergenic |
| TCAAAGAGAAATTTATAAGA+GGG | 0.545469 | 3_1:-66998570 | None:intergenic |
| GACGTACTCTGGTGTTATGA+AGG | 0.546221 | 3_1:+66997115 | Msa0369660:CDS |
| TTGTTGTCTGTGGCTAGCAG+AGG | 0.547461 | 3_1:-66998628 | None:intergenic |
| CAAGAGAGGGACGTTGACTC+CGG | 0.550502 | 3_1:-66996880 | None:intergenic |
| GCCACCAGCATAATCGGCTC+CGG | 0.553474 | 3_1:+66996960 | Msa0369660:CDS |
| TGCCAGGGAAAATAAAAGCC+AGG | 0.554102 | 3_1:-66998762 | None:intergenic |
| ATTGAACCAGGAACCGCCGC+CGG | 0.560640 | 3_1:-66996915 | None:intergenic |
| TGTTATAATCACAAACTTTG+GGG | 0.562562 | 3_1:+66997178 | Msa0369660:CDS |
| ACAGGACAAAATTATAGCAC+TGG | 0.566982 | 3_1:+66998954 | Msa0369660:CDS |
| GATTCCGGAGCCGATTATGC+TGG | 0.567198 | 3_1:-66996964 | None:intergenic |
| ATGTCACCAACACCGTCTGC+CGG | 0.570180 | 3_1:+66996861 | Msa0369660:CDS |
| CACAAATCTCTTGTTGTCTG+TGG | 0.572225 | 3_1:-66998638 | None:intergenic |
| CACGGCGACGATAAGAATCA+AGG | 0.576008 | 3_1:-66997036 | None:intergenic |
| GGTTCATTGGTGGAATTCAA+GGG | 0.580061 | 3_1:+66997573 | Msa0369660:CDS |
| CTATGCACTCCACATTATGT+TGG | 0.580938 | 3_1:+66998543 | Msa0369660:CDS |
| CCGAGAACTTTGAGAATCGC+CGG | 0.581794 | 3_1:-66996996 | None:intergenic |
| AGACGGTGTTGGTGACATCC+CGG | 0.584616 | 3_1:-66996856 | None:intergenic |
| TCTTATTACCATCATCGCAT+GGG | 0.595325 | 3_1:-66999424 | None:intergenic |
| TTGACTCCGGCAGACGGTGT+TGG | 0.599042 | 3_1:-66996867 | None:intergenic |
| ACTTAAAGCATTGTATATGT+TGG | 0.600971 | 3_1:-66999022 | None:intergenic |
| GAGGGAATACCAACATAATG+TGG | 0.601359 | 3_1:-66998552 | None:intergenic |
| TTTGTGGATTGCACGACAGG+GGG | 0.601459 | 3_1:-66999448 | None:intergenic |
| TCTTGGCATATCAACAAGAC+AGG | 0.602838 | 3_1:+66998936 | Msa0369660:CDS |
| GATTTGATCCGGTCAAGAGA+GGG | 0.609106 | 3_1:-66996893 | None:intergenic |
| TTGGTCTTGTACAAACGTGT+AGG | 0.611958 | 3_1:+66997637 | Msa0369660:CDS |
| TCCGGAGCCGATTATGCTGG+TGG | 0.619780 | 3_1:-66996961 | None:intergenic |
| GGATTTGATCCGGTCAAGAG+AGG | 0.624870 | 3_1:-66996894 | None:intergenic |
| ACCTTAAAACAATAGTGCCA+GGG | 0.625989 | 3_1:-66998777 | None:intergenic |
| AATATCAACTCTTCTTGCTG+TGG | 0.627616 | 3_1:+66998017 | Msa0369660:CDS |
| GGGACGTTGACTCCGGCAGA+CGG | 0.628323 | 3_1:-66996873 | None:intergenic |
| ACGGCGCCAGGGATTGAACC+AGG | 0.629078 | 3_1:-66996927 | None:intergenic |
| CGACATTGAATACGGCGCCA+GGG | 0.630121 | 3_1:-66996938 | None:intergenic |
| TTGAGCGCTTAAAGCTCCAA+CGG | 0.631364 | 3_1:-66997150 | None:intergenic |
| TTATCTGGAAAGGAAAGTGG+AGG | 0.631552 | 3_1:+66997514 | Msa0369660:CDS |
| TAATCGAGGAACCAGTTTAG+GGG | 0.641606 | 3_1:-66998100 | None:intergenic |
| AGAGTACGTCGTGGTTACAC+CGG | 0.641853 | 3_1:-66997102 | None:intergenic |
| GTTATAATCACAAACTTTGG+GGG | 0.644288 | 3_1:+66997179 | Msa0369660:CDS |
| AGTGGAGGTGAAGTGCACTT+GGG | 0.652737 | 3_1:+66997529 | Msa0369660:CDS |
| ACACGTTTGTACAAGACCAA+AGG | 0.661754 | 3_1:-66997634 | None:intergenic |
| GATGTTTGGTAGTCTAATCG+AGG | 0.668855 | 3_1:-66998114 | None:intergenic |
| AGGAAGCATAACAAGAACCA+AGG | 0.686365 | 3_1:-66997614 | None:intergenic |
| TCCATCTCATATGAAAACAG+CGG | 0.700147 | 3_1:+66998360 | Msa0369660:CDS |
| AGAAACGTGTGACAAAGTTG+GGG | 0.706721 | 3_1:+66999269 | Msa0369660:three_prime_UTR |
| CTTGACCGGATCAAATCCGG+CGG | 0.711799 | 3_1:+66996899 | Msa0369660:CDS |
| CATAACACCAGAGTACGTCG+TGG | 0.777944 | 3_1:-66997111 | None:intergenic |
| CGGTGTTGGTGACATCCCGG+CGG | 0.797506 | 3_1:-66996853 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTAATTATTATTCTATTAA+AGG | + | chr3_1:66998824-66998843 | Msa0369660:intron | 10.0% |
| !! | ATAAAAGAAACAGATTAAAT+TGG | - | chr3_1:66997238-66997257 | None:intergenic | 15.0% |
| !! | AAACAAAAAATTAATCCAAA+AGG | - | chr3_1:66997306-66997325 | None:intergenic | 15.0% |
| !! | TATTTATGAAAGTTTGAATT+TGG | + | chr3_1:66997332-66997351 | Msa0369660:intron | 15.0% |
| !! | ATTTATGAAAGTTTGAATTT+GGG | + | chr3_1:66997333-66997352 | Msa0369660:intron | 15.0% |
| !!! | ATTATTTGTTCCTTTTTTAA+GGG | + | chr3_1:66998216-66998235 | Msa0369660:intron | 15.0% |
| !!! | ATCTTTTATCAAAATCACAT+CGG | - | chr3_1:66997812-66997831 | None:intergenic | 20.0% |
| !!! | ACTTTTTTCGTTTTGAATTA+AGG | + | chr3_1:66997903-66997922 | Msa0369660:intron | 20.0% |
| !!! | CATTATTTGTTCCTTTTTTA+AGG | + | chr3_1:66998215-66998234 | Msa0369660:intron | 20.0% |
| !! | TCAAAGAGAAATTTATAAGA+GGG | - | chr3_1:66998573-66998592 | None:intergenic | 20.0% |
| !! | ATTAGAAACAAAGCAAATTT+AGG | - | chr3_1:66998905-66998924 | None:intergenic | 20.0% |
| !!! | TCTACTACAAAAAGTTTTAT+TGG | + | chr3_1:66999095-66999114 | Msa0369660:three_prime_UTR | 20.0% |
| !!! | CTACTACAAAAAGTTTTATT+GGG | + | chr3_1:66999096-66999115 | Msa0369660:three_prime_UTR | 20.0% |
| !!! | TACTACAAAAAGTTTTATTG+GGG | + | chr3_1:66999097-66999116 | Msa0369660:three_prime_UTR | 20.0% |
| !! | TCATTATCTTGTCAAATAAA+GGG | + | chr3_1:66999400-66999419 | Msa0369660:three_prime_UTR | 20.0% |
| !!! | ATTTTTTAGAGAGTTGAGAA+AGG | - | chr3_1:66996829-66996848 | None:intergenic | 25.0% |
| ! | TGTGTTATAATCACAAACTT+TGG | + | chr3_1:66997176-66997195 | Msa0369660:CDS | 25.0% |
| ! | GTGTTATAATCACAAACTTT+GGG | + | chr3_1:66997177-66997196 | Msa0369660:CDS | 25.0% |
| ! | TGTTATAATCACAAACTTTG+GGG | + | chr3_1:66997178-66997197 | Msa0369660:CDS | 25.0% |
| !!! | AAGTTTTGCACTTTAAAGTT+TGG | + | chr3_1:66997389-66997408 | Msa0369660:intron | 25.0% |
| !! | AAAGATAGGTTTTTGAATGA+TGG | + | chr3_1:66997434-66997453 | Msa0369660:intron | 25.0% |
| !! | AAGATAGGTTTTTGAATGAT+GGG | + | chr3_1:66997435-66997454 | Msa0369660:intron | 25.0% |
| ! | CACTAAGAATTAAGATATCA+TGG | - | chr3_1:66997682-66997701 | None:intergenic | 25.0% |
| ! | TTGATAAAAGATATACTCTG+AGG | + | chr3_1:66997820-66997839 | Msa0369660:intron | 25.0% |
| ! | TTTGAATTAAGGAGATTAAG+TGG | + | chr3_1:66997914-66997933 | Msa0369660:intron | 25.0% |
| ! | ACAAATCAAAGAATGATGTT+TGG | - | chr3_1:66998131-66998150 | None:intergenic | 25.0% |
| ! | CTCAAAGAGAAATTTATAAG+AGG | - | chr3_1:66998574-66998593 | None:intergenic | 25.0% |
| !!! | ACTTAAAGCATTGTATATGT+TGG | - | chr3_1:66999025-66999044 | None:intergenic | 25.0% |
| !!! | ACTACAAAAAGTTTTATTGG+GGG | + | chr3_1:66999098-66999117 | Msa0369660:three_prime_UTR | 25.0% |
| ! | TTAAACAATACTAACTAGCT+AGG | - | chr3_1:66999344-66999363 | None:intergenic | 25.0% |
| ! | TTATTTGACAAGATAATGAC+AGG | - | chr3_1:66999399-66999418 | None:intergenic | 25.0% |
| ! | GTCATTATCTTGTCAAATAA+AGG | + | chr3_1:66999399-66999418 | Msa0369660:three_prime_UTR | 25.0% |
| GAGAAAATCAACAGAAACTT+CGG | - | chr3_1:66997066-66997085 | None:intergenic | 30.0% | |
| GTTATAATCACAAACTTTGG+GGG | + | chr3_1:66997179-66997198 | Msa0369660:CDS | 30.0% | |
| GTTCTCTTCCTAATTATCAT+TGG | + | chr3_1:66997206-66997225 | Msa0369660:CDS | 30.0% | |
| ! | GGTTCTAACCAATGATAATT+AGG | - | chr3_1:66997217-66997236 | None:intergenic | 30.0% |
| ! | GAAAGTTTGAATTTGGGATT+TGG | + | chr3_1:66997339-66997358 | Msa0369660:intron | 30.0% |
| GTTTGTGATGTTGAAAAGAT+AGG | + | chr3_1:66997420-66997439 | Msa0369660:intron | 30.0% | |
| CTTAATTCTTAGTGCTTGTT+TGG | + | chr3_1:66997688-66997707 | Msa0369660:intron | 30.0% | |
| ! | AAACGAAAAAAGTGCATGTT+CGG | - | chr3_1:66997896-66997915 | None:intergenic | 30.0% |
| GCATTCACATTTCATTTCAA+TGG | + | chr3_1:66998177-66998196 | Msa0369660:CDS | 30.0% | |
| TACTTTACAATCGGTCTATT+TGG | + | chr3_1:66998415-66998434 | Msa0369660:CDS | 30.0% | |
| !! | GAAAGAAGTACCAAATATCT+GGG | - | chr3_1:66998714-66998733 | None:intergenic | 30.0% |
| !! | TGAAAGAAGTACCAAATATC+TGG | - | chr3_1:66998715-66998734 | None:intergenic | 30.0% |
| TTCTATTAAAGGTGACGAAT+TGG | + | chr3_1:66998835-66998854 | Msa0369660:intron | 30.0% | |
| ACGAATTGGAAACAGAATAA+AGG | + | chr3_1:66998849-66998868 | Msa0369660:intron | 30.0% | |
| AATCATGAATGAATAAAGCC+AGG | + | chr3_1:66998877-66998896 | Msa0369660:intron | 30.0% | |
| !! | TTTGCTTTGTTTCTAATGAC+AGG | + | chr3_1:66998908-66998927 | Msa0369660:intron | 30.0% |
| !! | TTGCTTTGTTTCTAATGACA+GGG | + | chr3_1:66998909-66998928 | Msa0369660:intron | 30.0% |
| !! | TAAAGCATTGTATATGTTGG+TGG | - | chr3_1:66999022-66999041 | None:intergenic | 30.0% |
| TAAGTAGCAAGTCATAAAGT+TGG | + | chr3_1:66999040-66999059 | Msa0369660:exon | 30.0% | |
| GAAAGCAACAACAAAAGAAT+GGG | - | chr3_1:66999077-66999096 | None:intergenic | 30.0% | |
| AGAAAGCAACAACAAAAGAA+TGG | - | chr3_1:66999078-66999097 | None:intergenic | 30.0% | |
| !!! | CTACAAAAAGTTTTATTGGG+GGG | + | chr3_1:66999099-66999118 | Msa0369660:three_prime_UTR | 30.0% |
| ! | CTTGCAAGATTTTTACAACA+AGG | - | chr3_1:66999196-66999215 | None:intergenic | 30.0% |
| ! | CTTGTTGTAAAAATCTTGCA+AGG | + | chr3_1:66999194-66999213 | Msa0369660:three_prime_UTR | 30.0% |
| ATAAGAATCAAGGCGAAAGA+AGG | - | chr3_1:66997029-66997048 | None:intergenic | 35.0% | |
| ! | GAGCTAAATATGACACCTTT+TGG | + | chr3_1:66997288-66997307 | Msa0369660:intron | 35.0% |
| ! | GTTTTATCTGGAAAGGAAAG+TGG | + | chr3_1:66997511-66997530 | Msa0369660:CDS | 35.0% |
| TTAGTGCTTGTTTGGTATGA+CGG | + | chr3_1:66997696-66997715 | Msa0369660:intron | 35.0% | |
| TACGTGTATGTTTGGTATCA+CGG | - | chr3_1:66997747-66997766 | None:intergenic | 35.0% | |
| CTGAGGTTTCATCAAAATCA+TGG | + | chr3_1:66997837-66997856 | Msa0369660:intron | 35.0% | |
| TATTCCAGAACTGTACTTCA+AGG | - | chr3_1:66998001-66998020 | None:intergenic | 35.0% | |
| AATATCAACTCTTCTTGCTG+TGG | + | chr3_1:66998017-66998036 | Msa0369660:CDS | 35.0% | |
| AAAAACACAAACCCCTAAAC+TGG | + | chr3_1:66998089-66998108 | Msa0369660:CDS | 35.0% | |
| TCTAGCAACACCCTTAAAAA+AGG | - | chr3_1:66998229-66998248 | None:intergenic | 35.0% | |
| TTACTTGCAGTACATCCTAT+TGG | + | chr3_1:66998322-66998341 | Msa0369660:intron | 35.0% | |
| TACTTGCAGTACATCCTATT+GGG | + | chr3_1:66998323-66998342 | Msa0369660:intron | 35.0% | |
| TCCATCTCATATGAAAACAG+CGG | + | chr3_1:66998360-66998379 | Msa0369660:CDS | 35.0% | |
| GCTGTAGTCTACTTTACAAT+CGG | + | chr3_1:66998406-66998425 | Msa0369660:CDS | 35.0% | |
| ! | CTATTTGGCTACCTTTTGTT+TGG | + | chr3_1:66998430-66998449 | Msa0369660:CDS | 35.0% |
| GTGTTGAATCTCCAAACAAA+AGG | - | chr3_1:66998444-66998463 | None:intergenic | 35.0% | |
| GAATAGGAGTTCATCAATGT+TGG | - | chr3_1:66998599-66998618 | None:intergenic | 35.0% | |
| CTATAGCAATCCCAGATATT+TGG | + | chr3_1:66998701-66998720 | Msa0369660:CDS | 35.0% | |
| TGGTACTTCTTTCAGTTTCT+AGG | + | chr3_1:66998721-66998740 | Msa0369660:CDS | 35.0% | |
| ACCTTAAAACAATAGTGCCA+GGG | - | chr3_1:66998780-66998799 | None:intergenic | 35.0% | |
| TACCTTAAAACAATAGTGCC+AGG | - | chr3_1:66998781-66998800 | None:intergenic | 35.0% | |
| ACAGGACAAAATTATAGCAC+TGG | + | chr3_1:66998954-66998973 | Msa0369660:CDS | 35.0% | |
| ! | AAATTCCAGGCTCATTTTGT+TGG | + | chr3_1:66999144-66999163 | Msa0369660:three_prime_UTR | 35.0% |
| ATACTAACTAGCTAGGTTCA+CGG | - | chr3_1:66999337-66999356 | None:intergenic | 35.0% | |
| TCTTATTACCATCATCGCAT+GGG | - | chr3_1:66999427-66999446 | None:intergenic | 35.0% | |
| TTCTTATTACCATCATCGCA+TGG | - | chr3_1:66999428-66999447 | None:intergenic | 35.0% | |
| GAGAGTTGAGAAAGGAAATG+TGG | - | chr3_1:66996821-66996840 | None:intergenic | 40.0% | |
| ! | TCTCTAAAAAATCTCACCGC+CGG | + | chr3_1:66996837-66996856 | Msa0369660:five_prime_UTR | 40.0% |
| !! | GGTGTTATGAAGGAAGCTTT+TGG | + | chr3_1:66997125-66997144 | Msa0369660:CDS | 40.0% |
| CAAAACTTCACCACTCAACT+TGG | - | chr3_1:66997377-66997396 | None:intergenic | 40.0% | |
| !! | TTGTTGCTGTTTGTGTGTGA+TGG | + | chr3_1:66997475-66997494 | Msa0369660:intron | 40.0% |
| ! | TTTGTGTGTGATGGAACAAC+AGG | + | chr3_1:66997484-66997503 | Msa0369660:intron | 40.0% |
| ! | TTGTGTGTGATGGAACAACA+GGG | + | chr3_1:66997485-66997504 | Msa0369660:intron | 40.0% |
| ! | ACAACAGGGGATGTTTTATC+TGG | + | chr3_1:66997499-66997518 | Msa0369660:intron | 40.0% |
| ! | AGGGGATGTTTTATCTGGAA+AGG | + | chr3_1:66997504-66997523 | Msa0369660:intron | 40.0% |
| TTATCTGGAAAGGAAAGTGG+AGG | + | chr3_1:66997514-66997533 | Msa0369660:CDS | 40.0% | |
| ! | GACTTTTGCAACAGTGGTTT+GGG | + | chr3_1:66997551-66997570 | Msa0369660:CDS | 40.0% |
| ! | ACTTTTGCAACAGTGGTTTG+GGG | + | chr3_1:66997552-66997571 | Msa0369660:CDS | 40.0% |
| GGTTCATTGGTGGAATTCAA+GGG | + | chr3_1:66997573-66997592 | Msa0369660:CDS | 40.0% | |
| ! | AGTTGCTCTTTTCATCACCT+TGG | + | chr3_1:66997597-66997616 | Msa0369660:CDS | 40.0% |
| ! | AGGAAGCATAACAAGAACCA+AGG | - | chr3_1:66997617-66997636 | None:intergenic | 40.0% |
| ! | GGTTCTTGTTATGCTTCCTT+TGG | + | chr3_1:66997618-66997637 | Msa0369660:CDS | 40.0% |
| ACACGTTTGTACAAGACCAA+AGG | - | chr3_1:66997637-66997656 | None:intergenic | 40.0% | |
| !! | TTGGTCTTGTACAAACGTGT+AGG | + | chr3_1:66997637-66997656 | Msa0369660:CDS | 40.0% |
| TAGTGCTTGTTTGGTATGAC+GGG | + | chr3_1:66997697-66997716 | Msa0369660:intron | 40.0% | |
| ! | ACATGGACTACGTGTATGTT+TGG | - | chr3_1:66997755-66997774 | None:intergenic | 40.0% |
| ACATACACGTAGTCCATGTT+CGG | + | chr3_1:66997756-66997775 | Msa0369660:intron | 40.0% | |
| !!! | TCGGATTGGCAGTGAATTTT+CGG | + | chr3_1:66997775-66997794 | Msa0369660:intron | 40.0% |
| GAATCCTTGAAGTACAGTTC+TGG | + | chr3_1:66997994-66998013 | Msa0369660:intron | 40.0% | |
| ! | CATTTGTTGCCATCTGTTCT+GGG | + | chr3_1:66998040-66998059 | Msa0369660:CDS | 40.0% |
| TAATCGAGGAACCAGTTTAG+GGG | - | chr3_1:66998103-66998122 | None:intergenic | 40.0% | |
| CTAATCGAGGAACCAGTTTA+GGG | - | chr3_1:66998104-66998123 | None:intergenic | 40.0% | |
| TCTAATCGAGGAACCAGTTT+AGG | - | chr3_1:66998105-66998124 | None:intergenic | 40.0% | |
| ! | GATGTTTGGTAGTCTAATCG+AGG | - | chr3_1:66998117-66998136 | None:intergenic | 40.0% |
| !! | ACCGCTGTTTTCATATGAGA+TGG | - | chr3_1:66998364-66998383 | None:intergenic | 40.0% |
| CTATGCACTCCACATTATGT+TGG | + | chr3_1:66998543-66998562 | Msa0369660:CDS | 40.0% | |
| GAGGGAATACCAACATAATG+TGG | - | chr3_1:66998555-66998574 | None:intergenic | 40.0% | |
| ! | CACAAATCTCTTGTTGTCTG+TGG | - | chr3_1:66998641-66998660 | None:intergenic | 40.0% |
| GATTGCTATAGCAGCAAGAT+AGG | - | chr3_1:66998692-66998711 | None:intergenic | 40.0% | |
| !! | TCCCTGGCACTATTGTTTTA+AGG | + | chr3_1:66998776-66998795 | Msa0369660:CDS | 40.0% |
| ACAAAGCAAATTTAGGAGCC+TGG | - | chr3_1:66998898-66998917 | None:intergenic | 40.0% | |
| TCTTGGCATATCAACAAGAC+AGG | + | chr3_1:66998936-66998955 | Msa0369660:CDS | 40.0% | |
| !!! | AAAGTTTTATTGGGGGGAGT+TGG | + | chr3_1:66999105-66999124 | Msa0369660:three_prime_UTR | 40.0% |
| !!! | AAGTTTTATTGGGGGGAGTT+GGG | + | chr3_1:66999106-66999125 | Msa0369660:three_prime_UTR | 40.0% |
| ACAGAAACGTGTGACAAAGT+TGG | + | chr3_1:66999267-66999286 | Msa0369660:three_prime_UTR | 40.0% | |
| CAGAAACGTGTGACAAAGTT+GGG | + | chr3_1:66999268-66999287 | Msa0369660:three_prime_UTR | 40.0% | |
| AGAAACGTGTGACAAAGTTG+GGG | + | chr3_1:66999269-66999288 | Msa0369660:three_prime_UTR | 40.0% | |
| GACAAGATAATGACAGGACA+TGG | - | chr3_1:66999393-66999412 | None:intergenic | 40.0% | |
| ! | CTCTAAAAAATCTCACCGCC+GGG | + | chr3_1:66996838-66996857 | Msa0369660:five_prime_UTR | 45.0% |
| GATTTGATCCGGTCAAGAGA+GGG | - | chr3_1:66996896-66996915 | None:intergenic | 45.0% | |
| TCTCTTGACCGGATCAAATC+CGG | + | chr3_1:66996896-66996915 | Msa0369660:CDS | 45.0% | |
| AATGTCGCCACCAGCATAAT+CGG | + | chr3_1:66996954-66996973 | Msa0369660:CDS | 45.0% | |
| CTCCGGAATCATGTCAATTC+CGG | + | chr3_1:66996977-66996996 | Msa0369660:CDS | 45.0% | |
| ! | CTCATGCGTTTTACACATGC+CGG | + | chr3_1:66997083-66997102 | Msa0369660:CDS | 45.0% |
| !! | GACGTACTCTGGTGTTATGA+AGG | + | chr3_1:66997115-66997134 | Msa0369660:CDS | 45.0% |
| !!! | AAGGAAGCTTTTGGTTCCGT+TGG | + | chr3_1:66997134-66997153 | Msa0369660:CDS | 45.0% |
| TTGAGCGCTTAAAGCTCCAA+CGG | - | chr3_1:66997153-66997172 | None:intergenic | 45.0% | |
| ! | GTTGAGCAAACCAAGTTGAG+TGG | + | chr3_1:66997364-66997383 | Msa0369660:intron | 45.0% |
| ! | TGTGTGTGATGGAACAACAG+GGG | + | chr3_1:66997486-66997505 | Msa0369660:intron | 45.0% |
| ! | ACTTGGGACTTTTGCAACAG+TGG | + | chr3_1:66997545-66997564 | Msa0369660:CDS | 45.0% |
| ! | GGACTTTTGCAACAGTGGTT+TGG | + | chr3_1:66997550-66997569 | Msa0369660:CDS | 45.0% |
| ! | AACAGTGGTTTGGGGTTCAT+TGG | + | chr3_1:66997560-66997579 | Msa0369660:CDS | 45.0% |
| GGGTTCATTGGTGGAATTCA+AGG | + | chr3_1:66997572-66997591 | Msa0369660:CDS | 45.0% | |
| ATTCACTGCCAATCCGAACA+TGG | - | chr3_1:66997772-66997791 | None:intergenic | 45.0% | |
| ! | GCATTTGTTGCCATCTGTTC+TGG | + | chr3_1:66998039-66998058 | Msa0369660:CDS | 45.0% |
| GTGAATGCTGTGACTACAAC+AGG | - | chr3_1:66998165-66998184 | None:intergenic | 45.0% | |
| CTTGCAAGCTCAAACCCAAT+AGG | - | chr3_1:66998340-66998359 | None:intergenic | 45.0% | |
| !! | CAGAATGCTGATTCTGCTGT+TGG | + | chr3_1:66998490-66998509 | Msa0369660:CDS | 45.0% |
| ATCAACAACAGCACTATGCC+TGG | + | chr3_1:66998744-66998763 | Msa0369660:CDS | 45.0% | |
| !!! | TGCCTGGCTTTTATTTTCCC+TGG | + | chr3_1:66998760-66998779 | Msa0369660:CDS | 45.0% |
| TGCCAGGGAAAATAAAAGCC+AGG | - | chr3_1:66998765-66998784 | None:intergenic | 45.0% | |
| TCTAATGACAGGGATGCTCT+TGG | + | chr3_1:66998919-66998938 | Msa0369660:intron | 45.0% | |
| !!! | AGTTTTATTGGGGGGAGTTG+GGG | + | chr3_1:66999107-66999126 | Msa0369660:three_prime_UTR | 45.0% |
| CACAACCAACAAAATGAGCC+TGG | - | chr3_1:66999152-66999171 | None:intergenic | 45.0% | |
| GGATTTGATCCGGTCAAGAG+AGG | - | chr3_1:66996897-66996916 | None:intergenic | 50.0% | |
| ! | GCTGGTGGCGACATTGAATA+CGG | - | chr3_1:66996949-66996968 | None:intergenic | 50.0% |
| CGCCGGAATTGACATGATTC+CGG | - | chr3_1:66996982-66997001 | None:intergenic | 50.0% | |
| ! | CCGAGAACTTTGAGAATCGC+CGG | - | chr3_1:66996999-66997018 | None:intergenic | 50.0% |
| CCGGCGATTCTCAAAGTTCT+CGG | + | chr3_1:66996996-66997015 | Msa0369660:CDS | 50.0% | |
| CACGGCGACGATAAGAATCA+AGG | - | chr3_1:66997039-66997058 | None:intergenic | 50.0% | |
| AACAGAAACTTCGGCGAGCA+CGG | - | chr3_1:66997057-66997076 | None:intergenic | 50.0% | |
| AGAGTACGTCGTGGTTACAC+CGG | - | chr3_1:66997105-66997124 | None:intergenic | 50.0% | |
| CATAACACCAGAGTACGTCG+TGG | - | chr3_1:66997114-66997133 | None:intergenic | 50.0% | |
| AAGTGGAGGTGAAGTGCACT+TGG | + | chr3_1:66997528-66997547 | Msa0369660:CDS | 50.0% | |
| AGTGGAGGTGAAGTGCACTT+GGG | + | chr3_1:66997529-66997548 | Msa0369660:CDS | 50.0% | |
| ! | AGTGGTTTGGGGTTCATTGG+TGG | + | chr3_1:66997563-66997582 | Msa0369660:CDS | 50.0% |
| CACGTAGTCCATGTTCGGAT+TGG | + | chr3_1:66997761-66997780 | Msa0369660:intron | 50.0% | |
| ! | TGTTGCCATCTGTTCTGGGT+TGG | + | chr3_1:66998044-66998063 | Msa0369660:CDS | 50.0% |
| AACAGCCAACCCAGAACAGA+TGG | - | chr3_1:66998052-66998071 | None:intergenic | 50.0% | |
| !! | TGGGTTGGCTGTTGTTGCTT+TGG | + | chr3_1:66998059-66998078 | Msa0369660:CDS | 50.0% |
| !! | GCTGTTGTTGCTTTGGTGCA+AGG | + | chr3_1:66998066-66998085 | Msa0369660:CDS | 50.0% |
| GCAGAGGCTTCTTAGGGAAT+AGG | - | chr3_1:66998615-66998634 | None:intergenic | 50.0% | |
| TGGCTAGCAGAGGCTTCTTA+GGG | - | chr3_1:66998621-66998640 | None:intergenic | 50.0% | |
| TTGTTGTCTGTGGCTAGCAG+AGG | - | chr3_1:66998631-66998650 | None:intergenic | 50.0% | |
| GTGGAAGGGGCAAAAATTCC+AGG | + | chr3_1:66999131-66999150 | Msa0369660:three_prime_UTR | 50.0% | |
| TAAAGGGTCCCATGCGATGA+TGG | + | chr3_1:66999416-66999435 | Msa0369660:three_prime_UTR | 50.0% | |
| !! | AGACGGTGTTGGTGACATCC+CGG | - | chr3_1:66996859-66996878 | None:intergenic | 55.0% |
| ATGTCACCAACACCGTCTGC+CGG | + | chr3_1:66996861-66996880 | Msa0369660:CDS | 55.0% | |
| !! | CAAGAGAGGGACGTTGACTC+CGG | - | chr3_1:66996883-66996902 | None:intergenic | 55.0% |
| GTCAACGTCCCTCTCTTGAC+CGG | + | chr3_1:66996885-66996904 | Msa0369660:CDS | 55.0% | |
| CTTGACCGGATCAAATCCGG+CGG | + | chr3_1:66996899-66996918 | Msa0369660:CDS | 55.0% | |
| CGACATTGAATACGGCGCCA+GGG | - | chr3_1:66996941-66996960 | None:intergenic | 55.0% | |
| GATTCCGGAGCCGATTATGC+TGG | - | chr3_1:66996967-66996986 | None:intergenic | 55.0% | |
| GGTGTAACCACGACGTACTC+TGG | + | chr3_1:66997104-66997123 | Msa0369660:CDS | 55.0% | |
| GTGGCTAGCAGAGGCTTCTT+AGG | - | chr3_1:66998622-66998641 | None:intergenic | 55.0% | |
| TTGACTCCGGCAGACGGTGT+TGG | - | chr3_1:66996870-66996889 | None:intergenic | 60.0% | |
| AACCGCCGCCGGATTTGATC+CGG | - | chr3_1:66996907-66996926 | None:intergenic | 60.0% | |
| ATTGAACCAGGAACCGCCGC+CGG | - | chr3_1:66996918-66996937 | None:intergenic | 60.0% | |
| GCGGTTCCTGGTTCAATCCC+TGG | + | chr3_1:66996921-66996940 | Msa0369660:CDS | 60.0% | |
| GCGACATTGAATACGGCGCC+AGG | - | chr3_1:66996942-66996961 | None:intergenic | 60.0% | |
| ! | GCCACCAGCATAATCGGCTC+CGG | + | chr3_1:66996960-66996979 | Msa0369660:CDS | 60.0% |
| TCCGGAGCCGATTATGCTGG+TGG | - | chr3_1:66996964-66996983 | None:intergenic | 60.0% | |
| !! | CGGTGTTGGTGACATCCCGG+CGG | - | chr3_1:66996856-66996875 | None:intergenic | 65.0% |
| !! | GGGACGTTGACTCCGGCAGA+CGG | - | chr3_1:66996876-66996895 | None:intergenic | 65.0% |
| GACCGGATCAAATCCGGCGG+CGG | + | chr3_1:66996902-66996921 | Msa0369660:CDS | 65.0% | |
| TCAAATCCGGCGGCGGTTCC+TGG | + | chr3_1:66996909-66996928 | Msa0369660:CDS | 65.0% | |
| ACGGCGCCAGGGATTGAACC+AGG | - | chr3_1:66996930-66996949 | None:intergenic | 65.0% | |
| TATTGGGGGGAGTTGGGGCG+TGG | + | chr3_1:66999112-66999131 | Msa0369660:three_prime_UTR | 65.0% | |
| GGGGGAGTTGGGGCGTGGAA+GGG | + | chr3_1:66999117-66999136 | Msa0369660:three_prime_UTR | 70.0% | |
| GGGGAGTTGGGGCGTGGAAG+GGG | + | chr3_1:66999118-66999137 | Msa0369660:three_prime_UTR | 70.0% | |
| GGGGGGAGTTGGGGCGTGGA+AGG | + | chr3_1:66999116-66999135 | Msa0369660:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 66996777 | 66999461 | 66996777 | ID=Msa0369660;Name=Msa0369660 |
| chr3_1 | mRNA | 66996777 | 66999461 | 66996777 | ID=Msa0369660-mRNA-1;Parent=Msa0369660;Name=Msa0369660-mRNA-1;_AED=0.21;_eAED=0.21;_QI=84|1|1|1|0.8|0.66|6|384|438 |
| chr3_1 | exon | 66996777 | 66997227 | 66996777 | ID=Msa0369660-mRNA-1:exon:13701;Parent=Msa0369660-mRNA-1 |
| chr3_1 | exon | 66997506 | 66997658 | 66997506 | ID=Msa0369660-mRNA-1:exon:13702;Parent=Msa0369660-mRNA-1 |
| chr3_1 | exon | 66997995 | 66998198 | 66997995 | ID=Msa0369660-mRNA-1:exon:13703;Parent=Msa0369660-mRNA-1 |
| chr3_1 | exon | 66998332 | 66998797 | 66998332 | ID=Msa0369660-mRNA-1:exon:13704;Parent=Msa0369660-mRNA-1 |
| chr3_1 | exon | 66998930 | 66999372 | 66998930 | ID=Msa0369660-mRNA-1:exon:13705;Parent=Msa0369660-mRNA-1 |
| chr3_1 | exon | 66999394 | 66999461 | 66999394 | ID=Msa0369660-mRNA-1:exon:13706;Parent=Msa0369660-mRNA-1 |
| chr3_1 | five_prime_UTR | 66996777 | 66996860 | 66996777 | ID=Msa0369660-mRNA-1:five_prime_utr;Parent=Msa0369660-mRNA-1 |
| chr3_1 | CDS | 66996861 | 66997227 | 66996861 | ID=Msa0369660-mRNA-1:cds;Parent=Msa0369660-mRNA-1 |
| chr3_1 | CDS | 66997506 | 66997658 | 66997506 | ID=Msa0369660-mRNA-1:cds;Parent=Msa0369660-mRNA-1 |
| chr3_1 | CDS | 66997995 | 66998198 | 66997995 | ID=Msa0369660-mRNA-1:cds;Parent=Msa0369660-mRNA-1 |
| chr3_1 | CDS | 66998332 | 66998797 | 66998332 | ID=Msa0369660-mRNA-1:cds;Parent=Msa0369660-mRNA-1 |
| chr3_1 | CDS | 66998930 | 66999056 | 66998930 | ID=Msa0369660-mRNA-1:cds;Parent=Msa0369660-mRNA-1 |
| chr3_1 | three_prime_UTR | 66999057 | 66999372 | 66999057 | ID=Msa0369660-mRNA-1:three_prime_utr;Parent=Msa0369660-mRNA-1 |
| chr3_1 | three_prime_UTR | 66999394 | 66999461 | 66999394 | ID=Msa0369660-mRNA-1:three_prime_utr;Parent=Msa0369660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
