Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0130340 | XP_003591770.1 | 93.243 | 296 | 8 | 2 | 1 | 296 | 1 | 284 | 0.0 | 563 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0130340 | sp|Q8L440|ORRM1_ARATH | 69.266 | 218 | 54 | 3 | 78 | 295 | 167 | 371 | 1.35e-103 | 310 |
Msa0130340 | sp|Q8L440|ORRM1_ARATH | 50.000 | 86 | 43 | 0 | 86 | 171 | 72 | 157 | 1.21e-25 | 107 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0130340 | G7I363 | 93.243 | 296 | 8 | 2 | 1 | 296 | 1 | 284 | 0.0 | 563 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000180 | Msa0130340 | 0.820222 | 7.688656e-53 | -8.615850e-47 |
Msa0008250 | Msa0130340 | 0.810555 | 1.087626e-50 | -8.615850e-47 |
Msa0028450 | Msa0130340 | 0.805203 | 1.494886e-49 | -8.615850e-47 |
Msa0030400 | Msa0130340 | 0.844243 | 8.530767e-59 | -8.615850e-47 |
Msa0032040 | Msa0130340 | 0.811492 | 6.815027e-51 | -8.615850e-47 |
Msa0036250 | Msa0130340 | 0.839374 | 1.646645e-57 | -8.615850e-47 |
Msa0036620 | Msa0130340 | 0.800298 | 1.539176e-48 | -8.615850e-47 |
Msa0044320 | Msa0130340 | 0.822902 | 1.846974e-53 | -8.615850e-47 |
Msa0056160 | Msa0130340 | 0.815875 | 7.389140e-52 | -8.615850e-47 |
Msa0065690 | Msa0130340 | 0.807392 | 5.168761e-50 | -8.615850e-47 |
Msa0070740 | Msa0130340 | 0.810350 | 1.204067e-50 | -8.615850e-47 |
Msa0070810 | Msa0130340 | 0.816766 | 4.668328e-52 | -8.615850e-47 |
Msa0072710 | Msa0130340 | 0.806727 | 7.148374e-50 | -8.615850e-47 |
Msa0072910 | Msa0130340 | 0.827560 | 1.462116e-54 | -8.615850e-47 |
Msa0083550 | Msa0130340 | 0.835636 | 1.494876e-56 | -8.615850e-47 |
Msa0089410 | Msa0130340 | 0.805198 | 1.498509e-49 | -8.615850e-47 |
Msa0090760 | Msa0130340 | 0.823478 | 1.355537e-53 | -8.615850e-47 |
Msa0092390 | Msa0130340 | 0.828906 | 6.927010e-55 | -8.615850e-47 |
Msa0093830 | Msa0130340 | 0.803876 | 2.827664e-49 | -8.615850e-47 |
Msa0094700 | Msa0130340 | 0.803177 | 3.948237e-49 | -8.615850e-47 |
Msa0094990 | Msa0130340 | 0.831011 | 2.125405e-55 | -8.615850e-47 |
Msa0115950 | Msa0130340 | 0.817821 | 2.703529e-52 | -8.615850e-47 |
Msa0120980 | Msa0130340 | 0.801006 | 1.103881e-48 | -8.615850e-47 |
Msa0121080 | Msa0130340 | 0.820746 | 5.827907e-53 | -8.615850e-47 |
Msa0127210 | Msa0130340 | 0.813681 | 2.263453e-51 | -8.615850e-47 |
Msa0130340 | Msa0135400 | 0.832292 | 1.027368e-55 | -8.615850e-47 |
Msa0130340 | Msa0136040 | 0.846595 | 1.968497e-59 | -8.615850e-47 |
Msa0130340 | Msa0136520 | 0.810695 | 1.014509e-50 | -8.615850e-47 |
Msa0130340 | Msa0137120 | -0.814208 | 1.731495e-51 | -8.615850e-47 |
Msa0130340 | Msa0164630 | 0.811745 | 6.003038e-51 | -8.615850e-47 |
Msa0130340 | Msa0168900 | 0.801381 | 9.249833e-49 | -8.615850e-47 |
Msa0130340 | Msa0173760 | 0.828867 | 7.079415e-55 | -8.615850e-47 |
Msa0130340 | Msa0173850 | 0.838995 | 2.064862e-57 | -8.615850e-47 |
Msa0130340 | Msa0179260 | 0.801770 | 7.697342e-49 | -8.615850e-47 |
Msa0130340 | Msa0190400 | 0.807822 | 4.188741e-50 | -8.615850e-47 |
Msa0130340 | Msa0199740 | 0.809356 | 1.970345e-50 | -8.615850e-47 |
Msa0130340 | Msa0206600 | 0.810161 | 1.322959e-50 | -8.615850e-47 |
Msa0130340 | Msa0207150 | 0.803343 | 3.648247e-49 | -8.615850e-47 |
Msa0130340 | Msa0251140 | 0.806791 | 6.928015e-50 | -8.615850e-47 |
Msa0130340 | Msa0258380 | 0.813264 | 2.795273e-51 | -8.615850e-47 |
Msa0130340 | Msa0258410 | 0.817409 | 3.347999e-52 | -8.615850e-47 |
Msa0130340 | Msa0265440 | 0.829512 | 4.939429e-55 | -8.615850e-47 |
Msa0130340 | Msa0269830 | 0.815330 | 9.772553e-52 | -8.615850e-47 |
Msa0130340 | Msa0270840 | 0.851145 | 1.074026e-60 | -8.615850e-47 |
Msa0130340 | Msa0272570 | 0.808364 | 3.212215e-50 | -8.615850e-47 |
Msa0130340 | Msa0274890 | 0.831131 | 1.985716e-55 | -8.615850e-47 |
Msa0130340 | Msa0275570 | -0.801508 | 8.711769e-49 | -8.615850e-47 |
Msa0130340 | Msa0279910 | 0.818050 | 2.399406e-52 | -8.615850e-47 |
Msa0130340 | Msa0281310 | 0.804545 | 2.052111e-49 | -8.615850e-47 |
Msa0130340 | Msa0288360 | 0.802352 | 5.843102e-49 | -8.615850e-47 |
Msa0130340 | Msa0304020 | 0.830653 | 2.602145e-55 | -8.615850e-47 |
Msa0130340 | Msa0305810 | 0.825487 | 4.564034e-54 | -8.615850e-47 |
Msa0130340 | Msa0309670 | 0.843876 | 1.069983e-58 | -8.615850e-47 |
Msa0130340 | Msa0315010 | 0.816454 | 5.483298e-52 | -8.615850e-47 |
Msa0130340 | Msa0323790 | 0.816205 | 6.236351e-52 | -8.615850e-47 |
Msa0130340 | Msa0327870 | 0.802412 | 5.678730e-49 | -8.615850e-47 |
Msa0130340 | Msa0327900 | 0.828283 | 9.800970e-55 | -8.615850e-47 |
Msa0130340 | Msa0330770 | 0.816013 | 6.882153e-52 | -8.615850e-47 |
Msa0130340 | Msa0341710 | 0.820898 | 5.378776e-53 | -8.615850e-47 |
Msa0130340 | Msa0361500 | 0.827333 | 1.657524e-54 | -8.615850e-47 |
Msa0130340 | Msa0365110 | 0.804540 | 2.057019e-49 | -8.615850e-47 |
Msa0130340 | Msa0367310 | 0.809420 | 1.909340e-50 | -8.615850e-47 |
Msa0130340 | Msa0370690 | 0.827982 | 1.158016e-54 | -8.615850e-47 |
Msa0130340 | Msa0378570 | 0.816539 | 5.249360e-52 | -8.615850e-47 |
Msa0130340 | Msa0383110 | 0.802132 | 6.487357e-49 | -8.615850e-47 |
Msa0130340 | Msa0387300 | -0.804818 | 1.799726e-49 | -8.615850e-47 |
Msa0130340 | Msa0409000 | 0.808255 | 3.388802e-50 | -8.615850e-47 |
Msa0130340 | Msa0424470 | 0.800696 | 1.277009e-48 | -8.615850e-47 |
Msa0130340 | Msa0427090 | 0.822865 | 1.884522e-53 | -8.615850e-47 |
Msa0130340 | Msa0438440 | 0.846972 | 1.552086e-59 | -8.615850e-47 |
Msa0130340 | Msa0456940 | 0.803421 | 3.514049e-49 | -8.615850e-47 |
Msa0130340 | Msa0471520 | 0.800635 | 1.313945e-48 | -8.615850e-47 |
Msa0130340 | Msa0473490 | 0.805273 | 1.445740e-49 | -8.615850e-47 |
Msa0130340 | Msa0475740 | 0.827302 | 1.686710e-54 | -8.615850e-47 |
Msa0130340 | Msa0476820 | 0.812846 | 3.452417e-51 | -8.615850e-47 |
Msa0130340 | Msa0510410 | 0.814413 | 1.560176e-51 | -8.615850e-47 |
Msa0130340 | Msa0516330 | 0.816285 | 5.982578e-52 | -8.615850e-47 |
Msa0130340 | Msa0516480 | 0.808668 | 2.765819e-50 | -8.615850e-47 |
Msa0130340 | Msa0524570 | 0.805771 | 1.136288e-49 | -8.615850e-47 |
Msa0130340 | Msa0533270 | 0.824296 | 8.714717e-54 | -8.615850e-47 |
Msa0130340 | Msa0550760 | 0.836620 | 8.412730e-57 | -8.615850e-47 |
Msa0130340 | Msa0559280 | 0.814878 | 1.231079e-51 | -8.615850e-47 |
Msa0130340 | Msa0559890 | 0.818923 | 1.521624e-52 | -8.615850e-47 |
Msa0130340 | Msa0561420 | 0.804056 | 2.594362e-49 | -8.615850e-47 |
Msa0130340 | Msa0562680 | 0.814110 | 1.820339e-51 | -8.615850e-47 |
Msa0130340 | Msa0565530 | 0.822366 | 2.461742e-53 | -8.615850e-47 |
Msa0130340 | Msa0568120 | 0.802436 | 5.616128e-49 | -8.615850e-47 |
Msa0130340 | Msa0568810 | 0.803084 | 4.127212e-49 | -8.615850e-47 |
Msa0130340 | Msa0569290 | 0.810614 | 1.055925e-50 | -8.615850e-47 |
Msa0130340 | Msa0572820 | 0.801149 | 1.032036e-48 | -8.615850e-47 |
Msa0130340 | Msa0573970 | 0.831715 | 1.426578e-55 | -8.615850e-47 |
Msa0130340 | Msa0574350 | 0.808510 | 2.989222e-50 | -8.615850e-47 |
Msa0130340 | Msa0575460 | 0.849930 | 2.356591e-60 | -8.615850e-47 |
Msa0130340 | Msa0581190 | 0.800795 | 1.218658e-48 | -8.615850e-47 |
Msa0130340 | Msa0597300 | 0.846008 | 2.844967e-59 | -8.615850e-47 |
Msa0130340 | Msa0607440 | 0.809338 | 1.988245e-50 | -8.615850e-47 |
Msa0130340 | Msa0612730 | 0.802250 | 6.133495e-49 | -8.615850e-47 |
Msa0130340 | Msa0616000 | 0.804219 | 2.399861e-49 | -8.615850e-47 |
Msa0130340 | Msa0618260 | 0.808993 | 2.356562e-50 | -8.615850e-47 |
Msa0130340 | Msa0619460 | 0.810792 | 9.666912e-51 | -8.615850e-47 |
Msa0130340 | Msa0619520 | 0.819278 | 1.263266e-52 | -8.615850e-47 |
Msa0130340 | Msa0621870 | 0.813206 | 2.878348e-51 | -8.615850e-47 |
Msa0130340 | Msa0629500 | 0.808617 | 2.836236e-50 | -8.615850e-47 |
Msa0130340 | Msa0629820 | 0.853095 | 2.996481e-61 | -8.615850e-47 |
Msa0130340 | Msa0629980 | 0.862204 | 5.981661e-64 | -8.615850e-47 |
Msa0130340 | Msa0654880 | 0.802244 | 6.151828e-49 | -8.615850e-47 |
Msa0130340 | Msa0657820 | 0.823907 | 1.075839e-53 | -8.615850e-47 |
Msa0130340 | Msa0659590 | 0.810319 | 1.222722e-50 | -8.615850e-47 |
Msa0130340 | Msa0705710 | 0.817372 | 3.411999e-52 | -8.615850e-47 |
Msa0130340 | Msa0707270 | 0.809401 | 1.926738e-50 | -8.615850e-47 |
Msa0130340 | Msa0710950 | 0.802638 | 5.102406e-49 | -8.615850e-47 |
Msa0130340 | Msa0715180 | 0.802723 | 4.898955e-49 | -8.615850e-47 |
Msa0130340 | Msa0749900 | 0.807865 | 4.102934e-50 | -8.615850e-47 |
Msa0130340 | Msa0766030 | 0.821736 | 3.445881e-53 | -8.615850e-47 |
Msa0130340 | Msa0781030 | 0.803559 | 3.290824e-49 | -8.615850e-47 |
Msa0130340 | Msa0789800 | 0.800091 | 1.695536e-48 | -8.615850e-47 |
Msa0130340 | Msa0805320 | 0.803710 | 3.061912e-49 | -8.615850e-47 |
Msa0130340 | Msa0807950 | 0.813831 | 2.097756e-51 | -8.615850e-47 |
Msa0130340 | Msa0829430 | 0.839230 | 1.794141e-57 | -8.615850e-47 |
Msa0130340 | Msa0830120 | 0.809497 | 1.837945e-50 | -8.615850e-47 |
Msa0130340 | Msa0830450 | 0.810570 | 1.079479e-50 | -8.615850e-47 |
Msa0130340 | Msa0833150 | 0.805315 | 1.416225e-49 | -8.615850e-47 |
Msa0130340 | Msa0840630 | 0.830595 | 2.687612e-55 | -8.615850e-47 |
Msa0130340 | Msa0846180 | 0.816092 | 6.607552e-52 | -8.615850e-47 |
Msa0130340 | Msa0881050 | 0.823107 | 1.655357e-53 | -8.615850e-47 |
Msa0130340 | Msa0882430 | -0.804179 | 2.445407e-49 | -8.615850e-47 |
Msa0130340 | Msa0884590 | 0.825989 | 3.468824e-54 | -8.615850e-47 |
Msa0130340 | Msa0902810 | 0.828670 | 7.903657e-55 | -8.615850e-47 |
Msa0130340 | Msa0906150 | 0.807282 | 5.454486e-50 | -8.615850e-47 |
Msa0130340 | Msa0917630 | 0.804570 | 2.027195e-49 | -8.615850e-47 |
Msa0130340 | Msa0937350 | 0.804884 | 1.743615e-49 | -8.615850e-47 |
Msa0130340 | Msa0967670 | 0.808673 | 2.758973e-50 | -8.615850e-47 |
Msa0130340 | Msa0967940 | 0.805340 | 1.399679e-49 | -8.615850e-47 |
Msa0130340 | Msa0968010 | 0.801722 | 7.873418e-49 | -8.615850e-47 |
Msa0130340 | Msa1011060 | 0.805526 | 1.279451e-49 | -8.615850e-47 |
Msa0130340 | Msa1014530 | 0.822904 | 1.845071e-53 | -8.615850e-47 |
Msa0130340 | Msa1015020 | 0.816245 | 6.108746e-52 | -8.615850e-47 |
Msa0130340 | Msa1024120 | 0.804028 | 2.628822e-49 | -8.615850e-47 |
Msa0130340 | Msa1035790 | 0.807756 | 4.326327e-50 | -8.615850e-47 |
Msa0130340 | Msa1038820 | 0.814196 | 1.742181e-51 | -8.615850e-47 |
Msa0130340 | Msa1050320 | 0.804241 | 2.373705e-49 | -8.615850e-47 |
Msa0130340 | Msa1055490 | 0.819317 | 1.237602e-52 | -8.615850e-47 |
Msa0130340 | Msa1083930 | 0.809043 | 2.299753e-50 | -8.615850e-47 |
Msa0130340 | Msa1092430 | 0.805073 | 1.591509e-49 | -8.615850e-47 |
Msa0130340 | Msa1096280 | 0.813911 | 2.013653e-51 | -8.615850e-47 |
Msa0130340 | Msa1107950 | 0.807136 | 5.858299e-50 | -8.615850e-47 |
Msa0130340 | Msa1113210 | 0.813562 | 2.403384e-51 | -8.615850e-47 |
Msa0130340 | Msa1117280 | 0.829470 | 5.055477e-55 | -8.615850e-47 |
Msa0130340 | Msa1120320 | -0.828518 | 8.596967e-55 | -8.615850e-47 |
Msa0130340 | Msa1144470 | 0.806475 | 8.080873e-50 | -8.615850e-47 |
Msa0130340 | Msa1145370 | 0.802734 | 4.875553e-49 | -8.615850e-47 |
Msa0130340 | Msa1151970 | 0.800824 | 1.202531e-48 | -8.615850e-47 |
Msa0130340 | Msa1166020 | 0.801949 | 7.073131e-49 | -8.615850e-47 |
Msa0130340 | Msa1198870 | 0.817572 | 3.075381e-52 | -8.615850e-47 |
Msa0130340 | Msa1205560 | 0.803578 | 3.261122e-49 | -8.615850e-47 |
Msa0130340 | Msa1208250 | 0.810926 | 9.039713e-51 | -8.615850e-47 |
Msa0130340 | Msa1215790 | 0.814441 | 1.538303e-51 | -8.615850e-47 |
Msa0130340 | Msa1223600 | 0.814102 | 1.827506e-51 | -8.615850e-47 |
Msa0130340 | Msa1228880 | 0.817411 | 3.343630e-52 | -8.615850e-47 |
Msa0130340 | Msa1233770 | 0.803689 | 3.092149e-49 | -8.615850e-47 |
Msa0130340 | Msa1254990 | 0.826051 | 3.353373e-54 | -8.615850e-47 |
Msa0130340 | Msa1258770 | 0.810997 | 8.726296e-51 | -8.615850e-47 |
Msa0130340 | Msa1265990 | 0.814989 | 1.162984e-51 | -8.615850e-47 |
Msa0130340 | Msa1269370 | 0.805989 | 1.022565e-49 | -8.615850e-47 |
Msa0130340 | Msa1293060 | 0.835168 | 1.962845e-56 | -8.615850e-47 |
Msa0130340 | Msa1297720 | 0.810291 | 1.240284e-50 | -8.615850e-47 |
Msa0130340 | Msa1303030 | 0.844729 | 6.310448e-59 | -8.615850e-47 |
Msa0130340 | Msa1326800 | 0.809779 | 1.598092e-50 | -8.615850e-47 |
Msa0130340 | Msa1329290 | 0.804552 | 2.045167e-49 | -8.615850e-47 |
Msa0130340 | Msa1330280 | 0.804981 | 1.664100e-49 | -8.615850e-47 |
Msa0130340 | Msa1339520 | 0.828745 | 7.577644e-55 | -8.615850e-47 |
Msa0130340 | Msa1344940 | 0.805618 | 1.223892e-49 | -8.615850e-47 |
Msa0130340 | Msa1351370 | 0.807611 | 4.643820e-50 | -8.615850e-47 |
Msa0130340 | Msa1353270 | 0.806370 | 8.501269e-50 | -8.615850e-47 |
Msa0130340 | Msa1357380 | 0.809967 | 1.456202e-50 | -8.615850e-47 |
Msa0130340 | Msa1357760 | 0.802585 | 5.232173e-49 | -8.615850e-47 |
Msa0130340 | Msa1366700 | 0.804762 | 1.848698e-49 | -8.615850e-47 |
Msa0130340 | Msa1368800 | 0.815525 | 8.843454e-52 | -8.615850e-47 |
Msa0130340 | Msa1369900 | 0.811409 | 7.102711e-51 | -8.615850e-47 |
Msa0130340 | Msa1372570 | 0.828702 | 7.761818e-55 | -8.615850e-47 |
Msa0130340 | Msa1376230 | 0.809657 | 1.697763e-50 | -8.615850e-47 |
Msa0130340 | Msa1391600 | 0.820190 | 7.819468e-53 | -8.615850e-47 |
Msa0130340 | Msa1393550 | 0.819586 | 1.074467e-52 | -8.615850e-47 |
Msa0130340 | Msa1397550 | 0.809821 | 1.565905e-50 | -8.615850e-47 |
Msa0130340 | Msa1406550 | 0.808366 | 3.208830e-50 | -8.615850e-47 |
Msa0130340 | Msa1412830 | 0.805140 | 1.540955e-49 | -8.615850e-47 |
Msa0130340 | Msa1414280 | 0.826766 | 2.265874e-54 | -8.615850e-47 |
Msa0130340 | Msa1422900 | 0.827323 | 1.666795e-54 | -8.615850e-47 |
Msa0130340 | Msa1425510 | 0.800955 | 1.130360e-48 | -8.615850e-47 |
Msa0130340 | Msa1426310 | 0.820904 | 5.361742e-53 | -8.615850e-47 |
Msa0130340 | Msa1437650 | 0.808745 | 2.662879e-50 | -8.615850e-47 |
Msa0130340 | Msa1438780 | 0.827384 | 1.612100e-54 | -8.615850e-47 |
Msa0130340 | Msa1444500 | 0.814662 | 1.374645e-51 | -8.615850e-47 |
Msa0130340 | Msa1449510 | 0.811971 | 5.359783e-51 | -8.615850e-47 |
Msa0130340 | Msa1451480 | 0.812191 | 4.801201e-51 | -8.615850e-47 |
Msa0130340 | Msa1465380 | 0.805505 | 1.292222e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0130340 | MtrunA17_Chr1g0198431 | 93.243 | 296 | 8 | 2 | 1 | 296 | 1 | 284 | 0.0 | 563 |
Msa0130340 | MtrunA17_Chr1g0166671 | 43.220 | 118 | 65 | 2 | 56 | 171 | 52 | 169 | 5.93e-27 | 105 |
Msa0130340 | MtrunA17_Chr1g0187251 | 33.793 | 145 | 95 | 1 | 55 | 198 | 70 | 214 | 2.12e-23 | 95.9 |
Msa0130340 | MtrunA17_Chr2g0280611 | 29.570 | 186 | 128 | 1 | 1 | 183 | 1 | 186 | 2.40e-20 | 87.8 |
Msa0130340 | MtrunA17_Chr7g0266751 | 47.191 | 89 | 40 | 1 | 198 | 286 | 33 | 114 | 5.80e-20 | 84.3 |
Msa0130340 | MtrunA17_Chr6g0481071 | 44.048 | 84 | 40 | 1 | 198 | 281 | 96 | 172 | 3.81e-19 | 83.2 |
Msa0130340 | MtrunA17_Chr7g0263001 | 44.211 | 95 | 46 | 1 | 192 | 286 | 30 | 117 | 1.15e-18 | 80.9 |
Msa0130340 | MtrunA17_Chr4g0042161 | 41.379 | 87 | 44 | 1 | 199 | 285 | 53 | 132 | 1.86e-17 | 77.4 |
Msa0130340 | MtrunA17_Chr4g0042151 | 37.778 | 90 | 46 | 2 | 199 | 288 | 46 | 125 | 3.23e-15 | 72.4 |
Msa0130340 | MtrunA17_Chr4g0031091 | 42.169 | 83 | 41 | 1 | 198 | 280 | 34 | 109 | 1.38e-14 | 68.9 |
Msa0130340 | MtrunA17_Chr4g0050781 | 41.667 | 84 | 42 | 2 | 198 | 281 | 8 | 84 | 1.67e-14 | 71.2 |
Msa0130340 | MtrunA17_Chr3g0121631 | 36.782 | 87 | 51 | 1 | 179 | 261 | 18 | 104 | 2.85e-14 | 68.9 |
Msa0130340 | MtrunA17_Chr7g0219031 | 36.842 | 95 | 58 | 1 | 175 | 269 | 20 | 112 | 3.61e-14 | 67.8 |
Msa0130340 | MtrunA17_Chr2g0278661 | 40.476 | 84 | 43 | 2 | 198 | 281 | 8 | 84 | 5.62e-14 | 70.1 |
Msa0130340 | MtrunA17_Chr4g0067641 | 30.841 | 107 | 74 | 0 | 67 | 173 | 72 | 178 | 6.60e-14 | 70.1 |
Msa0130340 | MtrunA17_Chr3g0119311 | 45.312 | 64 | 35 | 0 | 198 | 261 | 37 | 100 | 1.01e-13 | 67.0 |
Msa0130340 | MtrunA17_Chr7g0219021 | 35.294 | 102 | 51 | 2 | 193 | 294 | 36 | 122 | 1.13e-13 | 69.3 |
Msa0130340 | MtrunA17_Chr4g0061451 | 33.696 | 92 | 54 | 1 | 193 | 284 | 38 | 122 | 2.78e-13 | 68.6 |
Msa0130340 | MtrunA17_Chr2g0327921 | 40.476 | 84 | 43 | 1 | 198 | 281 | 8 | 84 | 3.70e-13 | 64.3 |
Msa0130340 | MtrunA17_Chr6g0467031 | 34.737 | 95 | 61 | 1 | 83 | 176 | 74 | 168 | 5.68e-13 | 66.2 |
Msa0130340 | MtrunA17_Chr3g0088511 | 34.000 | 100 | 56 | 2 | 196 | 295 | 31 | 120 | 1.05e-12 | 64.3 |
Msa0130340 | MtrunA17_Chr4g0065741 | 37.624 | 101 | 45 | 2 | 181 | 281 | 66 | 148 | 1.11e-12 | 64.7 |
Msa0130340 | MtrunA17_Chr3g0086861 | 40.000 | 70 | 42 | 0 | 192 | 261 | 39 | 108 | 1.30e-12 | 67.8 |
Msa0130340 | MtrunA17_Chr2g0316311 | 30.400 | 125 | 86 | 1 | 67 | 191 | 78 | 201 | 1.32e-12 | 67.4 |
Msa0130340 | MtrunA17_Chr4g0045921 | 44.048 | 84 | 39 | 1 | 197 | 280 | 76 | 151 | 2.92e-12 | 66.2 |
Msa0130340 | MtrunA17_Chr8g0346011 | 45.455 | 66 | 36 | 0 | 198 | 263 | 38 | 103 | 3.19e-11 | 62.8 |
Msa0130340 | MtrunA17_Chr7g0276531 | 36.585 | 82 | 48 | 1 | 184 | 261 | 5 | 86 | 5.06e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0130340 | AT3G20930.1 | 69.266 | 218 | 54 | 3 | 78 | 295 | 167 | 371 | 1.37e-104 | 310 |
Msa0130340 | AT3G20930.1 | 50.000 | 86 | 43 | 0 | 86 | 171 | 72 | 157 | 1.23e-26 | 107 |
Msa0130340 | AT3G20930.2 | 67.713 | 223 | 54 | 4 | 78 | 295 | 167 | 376 | 4.09e-102 | 304 |
Msa0130340 | AT3G20930.2 | 50.000 | 86 | 43 | 0 | 86 | 171 | 72 | 157 | 1.33e-26 | 107 |
Msa0130340 | AT1G32580.1 | 47.872 | 94 | 49 | 0 | 78 | 171 | 87 | 180 | 2.39e-26 | 103 |
Msa0130340 | AT2G35240.1 | 36.765 | 136 | 85 | 1 | 56 | 190 | 67 | 202 | 2.22e-24 | 99.0 |
Msa0130340 | AT1G73530.1 | 44.330 | 97 | 44 | 2 | 198 | 294 | 78 | 164 | 1.17e-18 | 82.0 |
Msa0130340 | AT4G13850.4 | 37.838 | 111 | 61 | 2 | 174 | 284 | 13 | 115 | 1.20e-16 | 75.1 |
Msa0130340 | AT4G13850.3 | 38.261 | 115 | 61 | 3 | 174 | 286 | 13 | 119 | 1.30e-16 | 75.5 |
Msa0130340 | AT4G13850.2 | 38.261 | 115 | 61 | 3 | 174 | 286 | 13 | 119 | 1.61e-16 | 75.5 |
Msa0130340 | AT4G13850.1 | 38.261 | 115 | 61 | 3 | 174 | 286 | 13 | 119 | 1.80e-16 | 75.5 |
Msa0130340 | AT1G11430.1 | 31.532 | 111 | 76 | 0 | 73 | 183 | 76 | 186 | 2.67e-16 | 77.0 |
Msa0130340 | AT5G06210.1 | 39.286 | 112 | 56 | 4 | 173 | 281 | 9 | 111 | 4.18e-16 | 74.3 |
Msa0130340 | AT3G23830.2 | 39.785 | 93 | 47 | 2 | 196 | 286 | 34 | 119 | 5.53e-16 | 73.6 |
Msa0130340 | AT3G23830.1 | 39.785 | 93 | 47 | 2 | 196 | 286 | 34 | 119 | 5.53e-16 | 73.6 |
Msa0130340 | AT2G37510.1 | 42.529 | 87 | 43 | 1 | 192 | 278 | 29 | 108 | 8.07e-16 | 73.6 |
Msa0130340 | AT4G20030.1 | 44.048 | 84 | 40 | 1 | 198 | 281 | 41 | 117 | 2.66e-15 | 72.4 |
Msa0130340 | AT2G27330.1 | 37.778 | 90 | 46 | 2 | 199 | 285 | 23 | 105 | 7.08e-15 | 70.1 |
Msa0130340 | AT3G46020.1 | 40.476 | 84 | 43 | 1 | 198 | 281 | 8 | 84 | 1.31e-14 | 68.9 |
Msa0130340 | AT5G54580.1 | 38.554 | 83 | 44 | 1 | 199 | 281 | 58 | 133 | 1.72e-14 | 70.1 |
Msa0130340 | AT3G26420.1 | 40.476 | 84 | 43 | 1 | 198 | 281 | 8 | 84 | 7.71e-14 | 70.1 |
Msa0130340 | AT5G47320.1 | 34.821 | 112 | 65 | 2 | 173 | 284 | 8 | 111 | 1.56e-13 | 68.9 |
Msa0130340 | AT5G61030.2 | 38.235 | 68 | 42 | 0 | 194 | 261 | 37 | 104 | 3.59e-13 | 68.9 |
Msa0130340 | AT5G61030.1 | 38.235 | 68 | 42 | 0 | 194 | 261 | 37 | 104 | 3.59e-13 | 68.9 |
Msa0130340 | AT2G46780.1 | 39.806 | 103 | 56 | 2 | 194 | 293 | 19 | 118 | 5.82e-13 | 68.6 |
Msa0130340 | AT2G46780.2 | 39.806 | 103 | 56 | 2 | 194 | 293 | 19 | 118 | 5.82e-13 | 68.6 |
Msa0130340 | AT3G15000.1 | 33.645 | 107 | 70 | 1 | 67 | 173 | 80 | 185 | 1.01e-12 | 68.2 |
Msa0130340 | AT1G74230.1 | 42.857 | 63 | 36 | 0 | 194 | 256 | 31 | 93 | 6.67e-12 | 65.1 |
Msa0130340 | AT3G06790.2 | 30.631 | 111 | 68 | 2 | 67 | 173 | 77 | 182 | 1.09e-11 | 63.9 |
Msa0130340 | AT3G08000.1 | 43.750 | 64 | 36 | 0 | 198 | 261 | 42 | 105 | 1.65e-11 | 61.6 |
Msa0130340 | AT4G39260.3 | 34.118 | 85 | 49 | 1 | 198 | 282 | 7 | 84 | 1.76e-11 | 60.1 |
Msa0130340 | AT3G06790.1 | 29.730 | 111 | 69 | 2 | 67 | 173 | 77 | 182 | 3.35e-11 | 62.8 |
Msa0130340 | AT2G22090.2 | 43.750 | 64 | 36 | 0 | 194 | 257 | 101 | 164 | 5.39e-11 | 62.8 |
Msa0130340 | AT3G15010.1 | 36.709 | 79 | 50 | 0 | 185 | 263 | 63 | 141 | 5.59e-11 | 63.2 |
Msa0130340 | AT3G15010.2 | 36.709 | 79 | 50 | 0 | 185 | 263 | 63 | 141 | 5.59e-11 | 63.2 |
Msa0130340 | AT2G22090.1 | 43.750 | 64 | 36 | 0 | 194 | 257 | 101 | 164 | 6.03e-11 | 62.8 |
Msa0130340 | AT4G39260.2 | 39.062 | 64 | 39 | 0 | 198 | 261 | 7 | 70 | 7.53e-11 | 59.3 |
Msa0130340 | AT1G72530.1 | 29.600 | 125 | 83 | 2 | 53 | 173 | 19 | 142 | 8.50e-11 | 60.5 |
Msa0130340 | AT1G22910.2 | 43.939 | 66 | 37 | 0 | 198 | 263 | 14 | 79 | 9.13e-11 | 61.2 |
Msa0130340 | AT1G22910.1 | 43.939 | 66 | 37 | 0 | 198 | 263 | 14 | 79 | 9.91e-11 | 61.2 |
Find 103 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTTCATGGAAAACCAATTT+TGG | 0.112663 | 1_3:-60525017 | Msa0130340:CDS |
AGAGGAAAAGGTTTGAAATT+TGG | 0.197528 | 1_3:+60525483 | None:intergenic |
TACTTACTTTCCCATGATTT+TGG | 0.210808 | 1_3:+60525177 | None:intergenic |
AGATCTATTTGCAAAATCTT+TGG | 0.212636 | 1_3:+60522489 | None:intergenic |
TTATTGGAAGTTGGTGAATT+TGG | 0.216606 | 1_3:+60525440 | None:intergenic |
TTCACAACAAAACCCAAAAT+TGG | 0.220232 | 1_3:+60525004 | None:intergenic |
CATATGTTCAGGTAGAAATT+TGG | 0.220805 | 1_3:-60523972 | Msa0130340:intron |
TGACTTGCTTCAGAAGAATT+TGG | 0.222835 | 1_3:+60523932 | None:intergenic |
AAAATACTAAAATTTAATTT+TGG | 0.239857 | 1_3:-60522332 | Msa0130340:three_prime_UTR |
CAATAATAAATCTTTAACTA+TGG | 0.241661 | 1_3:-60522364 | Msa0130340:three_prime_UTR |
AACATCTCCGGAGAATATTA+TGG | 0.243718 | 1_3:+60522707 | None:intergenic |
TTGTGCGTGCAGATTATTAA+TGG | 0.253086 | 1_3:-60523284 | Msa0130340:intron |
CAATGCTTTGAATTTCCATT+AGG | 0.287884 | 1_3:+60525277 | None:intergenic |
TATTGGAAGTTGGTGAATTT+GGG | 0.309594 | 1_3:+60525441 | None:intergenic |
GATATGTTGTTGTTCCCTAA+TGG | 0.313873 | 1_3:-60525292 | Msa0130340:CDS |
GTATCTTGGTGGGGTGGTCT+TGG | 0.320085 | 1_3:+60523238 | None:intergenic |
GATCTATTTGCAAAATCTTT+GGG | 0.333253 | 1_3:+60522490 | None:intergenic |
GCTTGGACGATGATGTTATA+AGG | 0.335303 | 1_3:-60522846 | Msa0130340:three_prime_UTR |
TCTGTCCAACAGGCTTGTTC+TGG | 0.336939 | 1_3:-60522420 | Msa0130340:three_prime_UTR |
AAATGTAAATGTAGGGATAT+TGG | 0.346471 | 1_3:+60522547 | None:intergenic |
AATGCTTTGAATTTCCATTA+GGG | 0.351537 | 1_3:+60525278 | None:intergenic |
CGCGCCGCATTTGAAGGCTT+TGG | 0.352596 | 1_3:-60523641 | Msa0130340:CDS |
TGGTCAAAATTTGAGCATAA+TGG | 0.352734 | 1_3:+60525197 | None:intergenic |
TGTGTATATATCATGTTTCA+TGG | 0.359894 | 1_3:-60525031 | Msa0130340:CDS |
ATGGTCAACAATTTGAGCTT+TGG | 0.361173 | 1_3:+60525216 | None:intergenic |
AAAAGAGGAATTACATGAAA+TGG | 0.362195 | 1_3:+60525360 | None:intergenic |
TTATAACCACACATGCTCTT+AGG | 0.374255 | 1_3:-60522668 | Msa0130340:three_prime_UTR |
AACACAATCCTAAGGTTTCA+TGG | 0.386887 | 1_3:+60525543 | None:intergenic |
TCAGACTCAAAATTGTCATC+TGG | 0.388385 | 1_3:+60524839 | None:intergenic |
GCACGACCCTTGTTGTATCT+TGG | 0.392813 | 1_3:+60523224 | None:intergenic |
ACCTTACGCGCCGCATTTGA+AGG | 0.398224 | 1_3:-60523647 | Msa0130340:CDS |
GATAGAGAAGTAACTTGGTC+AGG | 0.399152 | 1_3:+60522808 | None:intergenic |
TTCTTATCAAGCAGATGGTC+TGG | 0.401047 | 1_3:+60523202 | None:intergenic |
AAAGCATTGGGTTGTTAGAA+TGG | 0.404538 | 1_3:-60525263 | Msa0130340:CDS |
CCTCTGACATCTTTATGAAA+TGG | 0.404893 | 1_3:-60522460 | Msa0130340:three_prime_UTR |
TAATGGAAATTCAAAGCATT+GGG | 0.410201 | 1_3:-60525275 | Msa0130340:CDS |
TGTCTTTGATTCATTCTCAA+TGG | 0.412062 | 1_3:+60525588 | None:intergenic |
ACTTCTTCCCATGAAACCTT+AGG | 0.417081 | 1_3:-60525551 | Msa0130340:five_prime_UTR |
CTTGGACGATGATGTTATAA+GGG | 0.423624 | 1_3:-60522845 | Msa0130340:three_prime_UTR |
TATGTTCAAAATGTAAATGT+AGG | 0.426220 | 1_3:+60522539 | None:intergenic |
TGCTGAAATTCTAGTAAAAG+AGG | 0.428882 | 1_3:+60525345 | None:intergenic |
TTAAAGATTTATTATTGTAC+AGG | 0.432425 | 1_3:+60522370 | None:intergenic |
TGAAGATAAGTTGAATCAAA+TGG | 0.435228 | 1_3:+60522754 | None:intergenic |
GATTGTGTTGCAGGTGTGCC+TGG | 0.437556 | 1_3:-60524878 | Msa0130340:intron |
ACATCTCCGGAGAATATTAT+GGG | 0.438627 | 1_3:+60522708 | None:intergenic |
AAATTCTTCTGAAGCAAGTC+AGG | 0.439004 | 1_3:-60523930 | Msa0130340:CDS |
GCCTTCAAATGCGGCGCGTA+AGG | 0.441311 | 1_3:+60523646 | None:intergenic |
CTAATGGAAATTCAAAGCAT+TGG | 0.444153 | 1_3:-60525276 | Msa0130340:CDS |
CGACCCTTGTTGTATCTTGG+TGG | 0.456934 | 1_3:+60523227 | None:intergenic |
TTATAGATAAAATTTCAAAA+AGG | 0.469097 | 1_3:-60523512 | Msa0130340:CDS |
TTACATACATGAAAGAAAGA+TGG | 0.469881 | 1_3:+60523408 | None:intergenic |
TTGCAAAATCTTTGGGCCAA+AGG | 0.474574 | 1_3:+60522497 | None:intergenic |
TTGAAATTTGGTGAATGTAA+CGG | 0.475852 | 1_3:+60525495 | None:intergenic |
TCTGAAAATAAGGATTATGA+AGG | 0.486651 | 1_3:-60524821 | Msa0130340:intron |
TGAAATGGAACAAGAAGAAG+AGG | 0.487089 | 1_3:+60525375 | None:intergenic |
CTCTTTGAGTGCTGCACTTG+CGG | 0.491061 | 1_3:+60523449 | None:intergenic |
GACCCTTGTTGTATCTTGGT+GGG | 0.491716 | 1_3:+60523228 | None:intergenic |
GATAAGAAAAGAAGTCTGTA+AGG | 0.503154 | 1_3:-60523187 | Msa0130340:intron |
TTCAATGAATGCATAACCCT+TGG | 0.504848 | 1_3:+60523488 | None:intergenic |
ATGCTTCATTCAACAAGGCT+TGG | 0.523221 | 1_3:-60522863 | Msa0130340:three_prime_UTR |
ATGTTTGTAACACAATCCTA+AGG | 0.525771 | 1_3:+60525535 | None:intergenic |
TATTAATGGCTGGATGATAG+TGG | 0.526032 | 1_3:-60523270 | Msa0130340:CDS |
GGCTTTGGTGAGCTTGTTGA+AGG | 0.526097 | 1_3:-60523626 | Msa0130340:intron |
TTTGAAAGTTCAGTGTGTGC+AGG | 0.552838 | 1_3:+60522577 | None:intergenic |
TTGGTAACAACACCAACAGC+AGG | 0.553041 | 1_3:+60525235 | None:intergenic |
ACACAATCCTAAGGTTTCAT+GGG | 0.554807 | 1_3:+60525544 | None:intergenic |
TTGAATCAAATGGAGACAGA+GGG | 0.557854 | 1_3:+60522764 | None:intergenic |
TGCACTTGCGGCCTCCTCTG+TGG | 0.559303 | 1_3:+60523461 | None:intergenic |
ATGTTCAAAATGTAAATGTA+GGG | 0.567495 | 1_3:+60522540 | None:intergenic |
CTTGTTGTATCTTGGTGGGG+TGG | 0.570175 | 1_3:+60523232 | None:intergenic |
TCACTTCCTAAGAGCATGTG+TGG | 0.571599 | 1_3:+60522662 | None:intergenic |
GCAGCACTCAAAGAGATGAA+TGG | 0.574975 | 1_3:-60523441 | Msa0130340:CDS |
ATAGAGAAGTAACTTGGTCA+GGG | 0.575323 | 1_3:+60522809 | None:intergenic |
TAGACACCCATAATATTCTC+CGG | 0.577652 | 1_3:-60522714 | Msa0130340:three_prime_UTR |
GCCTACCAGAACAAGCCTGT+TGG | 0.582157 | 1_3:+60522415 | None:intergenic |
GGCTGAACAGACAAGACACC+AGG | 0.582996 | 1_3:+60524860 | None:intergenic |
TCCAACAGGCTTGTTCTGGT+AGG | 0.584549 | 1_3:-60522416 | Msa0130340:three_prime_UTR |
GCGTGCAGATTATTAATGGC+TGG | 0.585212 | 1_3:-60523280 | Msa0130340:intron |
GGTGTTTGTTTGCAGTGAGA+AGG | 0.587961 | 1_3:-60525063 | Msa0130340:intron |
CACGTACCAGCGATCACTAG+AGG | 0.589950 | 1_3:-60522628 | Msa0130340:three_prime_UTR |
GAAATGATAGAGAAGTAACT+TGG | 0.590055 | 1_3:+60522803 | None:intergenic |
GATTCGCCTCTAGTGATCGC+TGG | 0.591786 | 1_3:+60522622 | None:intergenic |
TCAAATGGAGACAGAGGGGA+AGG | 0.593229 | 1_3:+60522769 | None:intergenic |
ACCCTTGTTGTATCTTGGTG+GGG | 0.593877 | 1_3:+60523229 | None:intergenic |
CACCCCACCAAGATACAACA+AGG | 0.594378 | 1_3:-60523231 | Msa0130340:CDS |
GATTGTGCACATGAGCTAGC+TGG | 0.605037 | 1_3:-60524972 | Msa0130340:intron |
CTCACCAAAGCCTTCAAATG+CGG | 0.607563 | 1_3:+60523637 | None:intergenic |
TTAGGATTGTGTTACAAACA+TGG | 0.629521 | 1_3:-60525533 | Msa0130340:exon |
GGCGAATCTAGTGTATCATG+AGG | 0.630993 | 1_3:-60522607 | Msa0130340:three_prime_UTR |
GTTGAATCAAATGGAGACAG+AGG | 0.631897 | 1_3:+60522763 | None:intergenic |
CCATTTCATAAAGATGTCAG+AGG | 0.632361 | 1_3:+60522460 | None:intergenic |
AGTCATATCCTCAAAACCCA+AGG | 0.656073 | 1_3:+60525625 | None:intergenic |
TTGGACGATGATGTTATAAG+GGG | 0.661225 | 1_3:-60522844 | Msa0130340:three_prime_UTR |
AGAATGGATAAACCTGCTGT+TGG | 0.670334 | 1_3:-60525247 | Msa0130340:CDS |
AATGCATGCTTCATTCAACA+AGG | 0.670821 | 1_3:-60522868 | Msa0130340:three_prime_UTR |
GAAATGGAACAAGAAGAAGA+GGG | 0.676478 | 1_3:+60525376 | None:intergenic |
ACTCAAAGAGATGAATGGCA+AGG | 0.678432 | 1_3:-60523436 | Msa0130340:CDS |
CATTGAATACACCACAGAGG+AGG | 0.681799 | 1_3:-60523472 | Msa0130340:CDS |
GCGAATCTAGTGTATCATGA+GGG | 0.682810 | 1_3:-60522606 | Msa0130340:three_prime_UTR |
TAGAGAAGTAACTTGGTCAG+GGG | 0.693220 | 1_3:+60522810 | None:intergenic |
TGAATCAAATGGAGACAGAG+GGG | 0.733687 | 1_3:+60522765 | None:intergenic |
ACCCCACCAAGATACAACAA+GGG | 0.762422 | 1_3:-60523230 | Msa0130340:CDS |
ATTCATTGAATACACCACAG+AGG | 0.811623 | 1_3:-60523475 | Msa0130340:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATAATATATTAGCAAAAA+CGG | + | chr1_3:60523160-60523179 | None:intergenic | 10.0% |
!! | AATATATTATAAATTTACCT+AGG | - | chr1_3:60523168-60523187 | Msa0130340:intron | 10.0% |
!! | TATGTTAATTTATATTTCAT+TGG | - | chr1_3:60523248-60523267 | Msa0130340:CDS | 10.0% |
!! | ATAAATAAATATGTATGTAT+TGG | - | chr1_3:60523624-60523643 | Msa0130340:intron | 10.0% |
!! | TTATAGATAAAATTTCAAAA+AGG | - | chr1_3:60524439-60524458 | Msa0130340:intron | 10.0% |
!! | AGATAAATAATTGAATTATA+TGG | + | chr1_3:60524903-60524922 | None:intergenic | 10.0% |
!! | TTAAAGATTTATTATTGTAC+AGG | + | chr1_3:60525584-60525603 | None:intergenic | 15.0% |
!! | CAATAATAAATCTTTAACTA+TGG | - | chr1_3:60525587-60525606 | Msa0130340:five_prime_UTR | 15.0% |
!! | GAAGCATAAATAAATACTTT+GGG | - | chr1_3:60524201-60524220 | Msa0130340:intron | 20.0% |
!!! | CGCTTTTACTAATAAATAAA+TGG | - | chr1_3:60524394-60524413 | Msa0130340:intron | 20.0% |
!!! | ATTTTTATATCTTCCAGATT+TGG | - | chr1_3:60525049-60525068 | Msa0130340:CDS | 20.0% |
!!! | TTTTTATATCTTCCAGATTT+GGG | - | chr1_3:60525050-60525069 | Msa0130340:CDS | 20.0% |
!! | ATGTTCAAAATGTAAATGTA+GGG | + | chr1_3:60525414-60525433 | None:intergenic | 20.0% |
!! | TATGTTCAAAATGTAAATGT+AGG | + | chr1_3:60525415-60525434 | None:intergenic | 20.0% |
!! | TTGAAATTTGGTGAATGTAA+CGG | + | chr1_3:60522459-60522478 | None:intergenic | 25.0% |
!!! | GTTTTGTTTTTATTGGAAGT+TGG | + | chr1_3:60522523-60522542 | None:intergenic | 25.0% |
!!! | TTAGAGTGATTGTTTTTGTT+GGG | + | chr1_3:60522548-60522567 | None:intergenic | 25.0% |
!!! | ATTAGAGTGATTGTTTTTGT+TGG | + | chr1_3:60522549-60522568 | None:intergenic | 25.0% |
! | AAAAGAGGAATTACATGAAA+TGG | + | chr1_3:60522594-60522613 | None:intergenic | 25.0% |
!! | AATGCTTTGAATTTCCATTA+GGG | + | chr1_3:60522676-60522695 | None:intergenic | 25.0% |
!! | TAATGGAAATTCAAAGCATT+GGG | - | chr1_3:60522676-60522695 | Msa0130340:three_prime_UTR | 25.0% |
!!! | TCAAATTTTGACCAAAATCA+TGG | - | chr1_3:60522763-60522782 | Msa0130340:three_prime_UTR | 25.0% |
!!! | CAAATTTTGACCAAAATCAT+GGG | - | chr1_3:60522764-60522783 | Msa0130340:three_prime_UTR | 25.0% |
! | TGTGTATATATCATGTTTCA+TGG | - | chr1_3:60522920-60522939 | Msa0130340:intron | 25.0% |
!! | TTTCATGGAAAACCAATTTT+GGG | - | chr1_3:60522935-60522954 | Msa0130340:intron | 25.0% |
! | CATTAACATGTTTGATTCAA+AGG | + | chr1_3:60523025-60523044 | None:intergenic | 25.0% |
!!! | CAATTTTGAGTCTGAAAATA+AGG | - | chr1_3:60523120-60523139 | Msa0130340:intron | 25.0% |
! | TCTGAAAATAAGGATTATGA+AGG | - | chr1_3:60523130-60523149 | Msa0130340:intron | 25.0% |
! | ACATAACTTAACTTATACCT+AGG | + | chr1_3:60523188-60523207 | None:intergenic | 25.0% |
! | TAGGTATAAGTTAAGTTATG+TGG | - | chr1_3:60523187-60523206 | Msa0130340:intron | 25.0% |
! | AAAATATCATCCTAGATACA+AGG | + | chr1_3:60523229-60523248 | None:intergenic | 25.0% |
! | ATTATCTTTGAGCAATCAAT+TGG | + | chr1_3:60523582-60523601 | None:intergenic | 25.0% |
!! | TAAATATGTATGTATTGGTG+TGG | - | chr1_3:60523629-60523648 | Msa0130340:CDS | 25.0% |
!! | AAATATGTATGTATTGGTGT+GGG | - | chr1_3:60523630-60523649 | Msa0130340:CDS | 25.0% |
! | TTGTAGTTCATTGACATAAA+TGG | - | chr1_3:60523727-60523746 | Msa0130340:intron | 25.0% |
! | ATGTTTCAATAGAAACTACT+TGG | - | chr1_3:60523848-60523867 | Msa0130340:intron | 25.0% |
!! | GGAAGCATAAATAAATACTT+TGG | - | chr1_3:60524200-60524219 | Msa0130340:intron | 25.0% |
! | TAAAATTTCAAAAAGGTCCA+AGG | - | chr1_3:60524446-60524465 | Msa0130340:intron | 25.0% |
! | AAAATTTCAAAAAGGTCCAA+GGG | - | chr1_3:60524447-60524466 | Msa0130340:intron | 25.0% |
! | TTACATACATGAAAGAAAGA+TGG | + | chr1_3:60524546-60524565 | None:intergenic | 25.0% |
! | ATGTAGGAAGAAAAAGAATA+TGG | - | chr1_3:60524607-60524626 | Msa0130340:intron | 25.0% |
! | TGTAGGAAGAAAAAGAATAT+GGG | - | chr1_3:60524608-60524627 | Msa0130340:intron | 25.0% |
! | GATACAGTCTATATCTTAAA+TGG | - | chr1_3:60524875-60524894 | Msa0130340:intron | 25.0% |
!!! | ATAAACTTCCAATTTGTTGT+GGG | - | chr1_3:60524940-60524959 | Msa0130340:intron | 25.0% |
!!! | ATTTGCTATGTTAAGAACAA+TGG | + | chr1_3:60525031-60525050 | None:intergenic | 25.0% |
!! | TGAAGATAAGTTGAATCAAA+TGG | + | chr1_3:60525200-60525219 | None:intergenic | 25.0% |
! | AAATGTAAATGTAGGGATAT+TGG | + | chr1_3:60525407-60525426 | None:intergenic | 25.0% |
!!! | AACATTTTAATTTGCACCTT+TGG | - | chr1_3:60525438-60525457 | Msa0130340:CDS | 25.0% |
! | GATCTATTTGCAAAATCTTT+GGG | + | chr1_3:60525464-60525483 | None:intergenic | 25.0% |
! | AGATCTATTTGCAAAATCTT+TGG | + | chr1_3:60525465-60525484 | None:intergenic | 25.0% |
TGTCTTTGATTCATTCTCAA+TGG | + | chr1_3:60522366-60522385 | None:intergenic | 30.0% | |
ATGTTTGTAACACAATCCTA+AGG | + | chr1_3:60522419-60522438 | None:intergenic | 30.0% | |
TTAGGATTGTGTTACAAACA+TGG | - | chr1_3:60522418-60522437 | Msa0130340:three_prime_UTR | 30.0% | |
! | AGAGGAAAAGGTTTGAAATT+TGG | + | chr1_3:60522471-60522490 | None:intergenic | 30.0% |
!!! | TTTTGGTTTGAAAGAGGAAA+AGG | + | chr1_3:60522483-60522502 | None:intergenic | 30.0% |
!!! | TGTGTTTTTTGGTTTGAAAG+AGG | + | chr1_3:60522489-60522508 | None:intergenic | 30.0% |
!!! | TGAATTTGGGTTGTGTTTTT+TGG | + | chr1_3:60522500-60522519 | None:intergenic | 30.0% |
!! | TATTGGAAGTTGGTGAATTT+GGG | + | chr1_3:60522513-60522532 | None:intergenic | 30.0% |
!! | TTATTGGAAGTTGGTGAATT+TGG | + | chr1_3:60522514-60522533 | None:intergenic | 30.0% |
!!! | TTGGGCAGTTTTGTTTTTAT+TGG | + | chr1_3:60522530-60522549 | None:intergenic | 30.0% |
TGCTGAAATTCTAGTAAAAG+AGG | + | chr1_3:60522609-60522628 | None:intergenic | 30.0% | |
! | AACAACAACATATCGTTTTG+TGG | + | chr1_3:60522653-60522672 | None:intergenic | 30.0% |
! | CAATGCTTTGAATTTCCATT+AGG | + | chr1_3:60522677-60522696 | None:intergenic | 30.0% |
CTAATGGAAATTCAAAGCAT+TGG | - | chr1_3:60522675-60522694 | Msa0130340:three_prime_UTR | 30.0% | |
TGGTCAAAATTTGAGCATAA+TGG | + | chr1_3:60522757-60522776 | None:intergenic | 30.0% | |
! | TACTTACTTTCCCATGATTT+TGG | + | chr1_3:60522777-60522796 | None:intergenic | 30.0% |
AAATCATGGGAAAGTAAGTA+AGG | - | chr1_3:60522777-60522796 | Msa0130340:three_prime_UTR | 30.0% | |
!! | GCTTTGAAATTTGATGACAA+TGG | - | chr1_3:60522867-60522886 | Msa0130340:three_prime_UTR | 30.0% |
! | GTTTCATGGAAAACCAATTT+TGG | - | chr1_3:60522934-60522953 | Msa0130340:intron | 30.0% |
TTCACAACAAAACCCAAAAT+TGG | + | chr1_3:60522950-60522969 | None:intergenic | 30.0% | |
! | TTATGTGGTATGTGTGATTT+TGG | - | chr1_3:60523202-60523221 | Msa0130340:exon | 30.0% |
TTGATAGAAACTAGTTCAGA+AGG | - | chr1_3:60523751-60523770 | Msa0130340:intron | 30.0% | |
CATATGTTCAGGTAGAAATT+TGG | - | chr1_3:60523979-60523998 | Msa0130340:intron | 30.0% | |
! | ACAAAGAAACTTTTTGTGAC+AGG | - | chr1_3:60524058-60524077 | Msa0130340:intron | 30.0% |
!! | ACGACATAACATTGATTCTA+AGG | - | chr1_3:60524088-60524107 | Msa0130340:intron | 30.0% |
! | ACTTTTATCTCCTATTCATC+TGG | - | chr1_3:60524127-60524146 | Msa0130340:intron | 30.0% |
AGTTATTTGTCTCTTGAACA+GGG | - | chr1_3:60524257-60524276 | Msa0130340:intron | 30.0% | |
ATTCATTGTTCTCTTGTAGA+AGG | - | chr1_3:60524361-60524380 | Msa0130340:intron | 30.0% | |
! | TTCTTTTCTTATCAAGCAGA+TGG | + | chr1_3:60524757-60524776 | None:intergenic | 30.0% |
GATAAGAAAAGAAGTCTGTA+AGG | - | chr1_3:60524764-60524783 | Msa0130340:intron | 30.0% | |
!! | CATAAACTTCCAATTTGTTG+TGG | - | chr1_3:60524939-60524958 | Msa0130340:intron | 30.0% |
GAAATGATAGAGAAGTAACT+TGG | + | chr1_3:60525151-60525170 | None:intergenic | 30.0% | |
TAACTACTGAAAAACATCTC+CGG | + | chr1_3:60525259-60525278 | None:intergenic | 30.0% | |
ACACAATCCTAAGGTTTCAT+GGG | + | chr1_3:60522410-60522429 | None:intergenic | 35.0% | |
AACACAATCCTAAGGTTTCA+TGG | + | chr1_3:60522411-60522430 | None:intergenic | 35.0% | |
GAAATGGAACAAGAAGAAGA+GGG | + | chr1_3:60522578-60522597 | None:intergenic | 35.0% | |
TGAAATGGAACAAGAAGAAG+AGG | + | chr1_3:60522579-60522598 | None:intergenic | 35.0% | |
! | CGTTTTGTGGAATTGATGTT+TGG | + | chr1_3:60522640-60522659 | None:intergenic | 35.0% |
! | GATATGTTGTTGTTCCCTAA+TGG | - | chr1_3:60522659-60522678 | Msa0130340:three_prime_UTR | 35.0% |
!! | AAAGCATTGGGTTGTTAGAA+TGG | - | chr1_3:60522688-60522707 | Msa0130340:three_prime_UTR | 35.0% |
ATGGTCAACAATTTGAGCTT+TGG | + | chr1_3:60522738-60522757 | None:intergenic | 35.0% | |
!! | GTTTTGTTGTGAACTTGATG+AGG | - | chr1_3:60522957-60522976 | Msa0130340:intron | 35.0% |
TCAGACTCAAAATTGTCATC+TGG | + | chr1_3:60523115-60523134 | None:intergenic | 35.0% | |
!! | TGATTTTGGTCCTTGTATCT+AGG | - | chr1_3:60523216-60523235 | Msa0130340:CDS | 35.0% |
GAAGTAGTGATGATCAATGA+AGG | - | chr1_3:60523457-60523476 | Msa0130340:CDS | 35.0% | |
!! | TGACTTGCTTCAGAAGAATT+TGG | + | chr1_3:60524022-60524041 | None:intergenic | 35.0% |
!! | AAATTCTTCTGAAGCAAGTC+AGG | - | chr1_3:60524021-60524040 | Msa0130340:intron | 35.0% |
GTAAGAACATCCAGATGAAT+AGG | + | chr1_3:60524140-60524159 | None:intergenic | 35.0% | |
TGTGTGAATTACTCTCTCAA+TGG | - | chr1_3:60524179-60524198 | Msa0130340:intron | 35.0% | |
CAGTTATTTGTCTCTTGAAC+AGG | - | chr1_3:60524256-60524275 | Msa0130340:intron | 35.0% | |
TTCAATGAATGCATAACCCT+TGG | + | chr1_3:60524466-60524485 | None:intergenic | 35.0% | |
ATTCATTGAATACACCACAG+AGG | - | chr1_3:60524476-60524495 | Msa0130340:intron | 35.0% | |
TTGTGCGTGCAGATTATTAA+TGG | - | chr1_3:60524667-60524686 | Msa0130340:intron | 35.0% | |
TATTAATGGCTGGATGATAG+TGG | - | chr1_3:60524681-60524700 | Msa0130340:intron | 35.0% | |
AATGCATGCTTCATTCAACA+AGG | - | chr1_3:60525083-60525102 | Msa0130340:intron | 35.0% | |
CTTGGACGATGATGTTATAA+GGG | - | chr1_3:60525106-60525125 | Msa0130340:intron | 35.0% | |
TTGGACGATGATGTTATAAG+GGG | - | chr1_3:60525107-60525126 | Msa0130340:intron | 35.0% | |
ATAGAGAAGTAACTTGGTCA+GGG | + | chr1_3:60525145-60525164 | None:intergenic | 35.0% | |
TTGAATCAAATGGAGACAGA+GGG | + | chr1_3:60525190-60525209 | None:intergenic | 35.0% | |
TAGACACCCATAATATTCTC+CGG | - | chr1_3:60525237-60525256 | Msa0130340:CDS | 35.0% | |
ACATCTCCGGAGAATATTAT+GGG | + | chr1_3:60525246-60525265 | None:intergenic | 35.0% | |
AACATCTCCGGAGAATATTA+TGG | + | chr1_3:60525247-60525266 | None:intergenic | 35.0% | |
TTATAACCACACATGCTCTT+AGG | - | chr1_3:60525283-60525302 | Msa0130340:CDS | 35.0% | |
CCATTTCATAAAGATGTCAG+AGG | + | chr1_3:60525494-60525513 | None:intergenic | 35.0% | |
CCTCTGACATCTTTATGAAA+TGG | - | chr1_3:60525491-60525510 | Msa0130340:CDS | 35.0% | |
AGTCATATCCTCAAAACCCA+AGG | + | chr1_3:60522329-60522348 | None:intergenic | 40.0% | |
ACTTCTTCCCATGAAACCTT+AGG | - | chr1_3:60522400-60522419 | Msa0130340:three_prime_UTR | 40.0% | |
AGAATGGATAAACCTGCTGT+TGG | - | chr1_3:60522704-60522723 | Msa0130340:three_prime_UTR | 40.0% | |
TGAACTTGTGATTGTGTTGC+AGG | - | chr1_3:60523064-60523083 | Msa0130340:intron | 40.0% | |
AGACACTTGTCTAACACATG+TGG | + | chr1_3:60523342-60523361 | None:intergenic | 40.0% | |
!! | TCATAGTCATAGAAGTGTCG+GGG | + | chr1_3:60523421-60523440 | None:intergenic | 40.0% |
!! | CTCATAGTCATAGAAGTGTC+GGG | + | chr1_3:60523422-60523441 | None:intergenic | 40.0% |
! | CCTCATAGTCATAGAAGTGT+CGG | + | chr1_3:60523423-60523442 | None:intergenic | 40.0% |
CCTGAACATATGTAGTTAGC+AGG | + | chr1_3:60523971-60523990 | None:intergenic | 40.0% | |
CCTGCTAACTACATATGTTC+AGG | - | chr1_3:60523968-60523987 | Msa0130340:intron | 40.0% | |
! | GGAGAACATTTTTGCTTGCA+GGG | - | chr1_3:60524222-60524241 | Msa0130340:intron | 40.0% |
ACTCAAAGAGATGAATGGCA+AGG | - | chr1_3:60524515-60524534 | Msa0130340:intron | 40.0% | |
! | AATGCAATTTTGCTTTGCGC+TGG | - | chr1_3:60524566-60524585 | Msa0130340:intron | 40.0% |
TTCTTATCAAGCAGATGGTC+TGG | + | chr1_3:60524752-60524771 | None:intergenic | 40.0% | |
CGAAGACTGAATTCATTCCA+CGG | + | chr1_3:60524812-60524831 | None:intergenic | 40.0% | |
! | TTGCATTTAGCTCCCAAATC+TGG | + | chr1_3:60525065-60525084 | None:intergenic | 40.0% |
ATGCTTCATTCAACAAGGCT+TGG | - | chr1_3:60525088-60525107 | Msa0130340:intron | 40.0% | |
GCTTGGACGATGATGTTATA+AGG | - | chr1_3:60525105-60525124 | Msa0130340:intron | 40.0% | |
TAGAGAAGTAACTTGGTCAG+GGG | + | chr1_3:60525144-60525163 | None:intergenic | 40.0% | |
GATAGAGAAGTAACTTGGTC+AGG | + | chr1_3:60525146-60525165 | None:intergenic | 40.0% | |
TGAATCAAATGGAGACAGAG+GGG | + | chr1_3:60525189-60525208 | None:intergenic | 40.0% | |
GTTGAATCAAATGGAGACAG+AGG | + | chr1_3:60525191-60525210 | None:intergenic | 40.0% | |
GCGAATCTAGTGTATCATGA+GGG | - | chr1_3:60525345-60525364 | Msa0130340:CDS | 40.0% | |
TTTGAAAGTTCAGTGTGTGC+AGG | + | chr1_3:60525377-60525396 | None:intergenic | 40.0% | |
TTGCAAAATCTTTGGGCCAA+AGG | + | chr1_3:60525457-60525476 | None:intergenic | 40.0% | |
! | CACATACTTTTCTGTCCAAC+AGG | - | chr1_3:60525521-60525540 | Msa0130340:exon | 40.0% |
! | ACACTACACCTTGGGTTTTG+AGG | - | chr1_3:60522318-60522337 | Msa0130340:three_prime_UTR | 45.0% |
! | TTGGTAACAACACCAACAGC+AGG | + | chr1_3:60522719-60522738 | None:intergenic | 45.0% |
GGTGTTTGTTTGCAGTGAGA+AGG | - | chr1_3:60522888-60522907 | Msa0130340:three_prime_UTR | 45.0% | |
ATTAAGCATGTCCTGGTGAC+CGG | - | chr1_3:60523291-60523310 | Msa0130340:intron | 45.0% | |
TTGTCTAACACATGTGGCAC+GGG | + | chr1_3:60523336-60523355 | None:intergenic | 45.0% | |
CTTGTCTAACACATGTGGCA+CGG | + | chr1_3:60523337-60523356 | None:intergenic | 45.0% | |
CCGACACTTCTATGACTATG+AGG | - | chr1_3:60523420-60523439 | Msa0130340:CDS | 45.0% | |
ACGCGGACACGTTGAAATAA+AGG | + | chr1_3:60523659-60523678 | None:intergenic | 45.0% | |
ATGAAGCACAGACTTTGACG+CGG | + | chr1_3:60523682-60523701 | None:intergenic | 45.0% | |
! | GGGAGAACATTTTTGCTTGC+AGG | - | chr1_3:60524221-60524240 | Msa0130340:intron | 45.0% |
CTCACCAAAGCCTTCAAATG+CGG | + | chr1_3:60524317-60524336 | None:intergenic | 45.0% | |
CATTGAATACACCACAGAGG+AGG | - | chr1_3:60524479-60524498 | Msa0130340:intron | 45.0% | |
GCAGCACTCAAAGAGATGAA+TGG | - | chr1_3:60524510-60524529 | Msa0130340:intron | 45.0% | |
CTGCTTCGTGATTGTCATGT+AGG | - | chr1_3:60524591-60524610 | Msa0130340:intron | 45.0% | |
GCGTGCAGATTATTAATGGC+TGG | - | chr1_3:60524671-60524690 | Msa0130340:intron | 45.0% | |
ACCCCACCAAGATACAACAA+GGG | - | chr1_3:60524721-60524740 | Msa0130340:intron | 45.0% | |
! | ACCCTTGTTGTATCTTGGTG+GGG | + | chr1_3:60524725-60524744 | None:intergenic | 45.0% |
! | GACCCTTGTTGTATCTTGGT+GGG | + | chr1_3:60524726-60524745 | None:intergenic | 45.0% |
GCTATTAATTACCAGCTCCG+TGG | - | chr1_3:60524792-60524811 | Msa0130340:intron | 45.0% | |
!! | CTTCCAATTTGTTGTGGGTG+TGG | - | chr1_3:60524945-60524964 | Msa0130340:intron | 45.0% |
TGTCCACACCCACAACAAAT+TGG | + | chr1_3:60524951-60524970 | None:intergenic | 45.0% | |
ACAATGGCATGAGTGAACAC+TGG | + | chr1_3:60525015-60525034 | None:intergenic | 45.0% | |
! | TCACTTCCTAAGAGCATGTG+TGG | + | chr1_3:60525292-60525311 | None:intergenic | 45.0% |
GGCGAATCTAGTGTATCATG+AGG | - | chr1_3:60525344-60525363 | Msa0130340:CDS | 45.0% | |
!!! | TTTTTTTTTTTCTTTTTTAT+TGG | - | chr1_3:60522833-60522852 | Msa0130340:three_prime_UTR | 5.0% |
!!! | TTTTTTTTTTCTTTTTTATT+GGG | - | chr1_3:60522834-60522853 | Msa0130340:three_prime_UTR | 5.0% |
!!! | AAAATACTAAAATTTAATTT+TGG | - | chr1_3:60525619-60525638 | Msa0130340:five_prime_UTR | 5.0% |
GATTGTGCACATGAGCTAGC+TGG | - | chr1_3:60522979-60522998 | Msa0130340:intron | 50.0% | |
! | ATGCTTAATGCCAGAGGCGT+CGG | + | chr1_3:60523280-60523299 | None:intergenic | 50.0% |
CAGGACATGCTTAATGCCAG+AGG | + | chr1_3:60523286-60523305 | None:intergenic | 50.0% | |
CTCTGGCATTAAGCATGTCC+TGG | - | chr1_3:60523284-60523303 | Msa0130340:intron | 50.0% | |
!! | AAGTGTCGGGGATGTGTCTA+AGG | + | chr1_3:60523409-60523428 | None:intergenic | 50.0% |
!! | GGCTTTGGTGAGCTTGTTGA+AGG | - | chr1_3:60524325-60524344 | Msa0130340:intron | 50.0% |
! | CTCTTTGAGTGCTGCACTTG+CGG | + | chr1_3:60524505-60524524 | None:intergenic | 50.0% |
! | CTTGTTGTATCTTGGTGGGG+TGG | + | chr1_3:60524722-60524741 | None:intergenic | 50.0% |
CACCCCACCAAGATACAACA+AGG | - | chr1_3:60524720-60524739 | Msa0130340:intron | 50.0% | |
! | CGACCCTTGTTGTATCTTGG+TGG | + | chr1_3:60524727-60524746 | None:intergenic | 50.0% |
! | GCACGACCCTTGTTGTATCT+TGG | + | chr1_3:60524730-60524749 | None:intergenic | 50.0% |
CTGAATTCATTCCACGGAGC+TGG | + | chr1_3:60524806-60524825 | None:intergenic | 50.0% | |
TCAAATGGAGACAGAGGGGA+AGG | + | chr1_3:60525185-60525204 | None:intergenic | 50.0% | |
! | TCTGTCCAACAGGCTTGTTC+TGG | - | chr1_3:60525531-60525550 | Msa0130340:exon | 50.0% |
! | TCCAACAGGCTTGTTCTGGT+AGG | - | chr1_3:60525535-60525554 | Msa0130340:exon | 50.0% |
GATTGTGTTGCAGGTGTGCC+TGG | - | chr1_3:60523073-60523092 | Msa0130340:intron | 55.0% | |
GGCTGAACAGACAAGACACC+AGG | + | chr1_3:60523094-60523113 | None:intergenic | 55.0% | |
AACACATGTGGCACGGGTGT+CGG | + | chr1_3:60523330-60523349 | None:intergenic | 55.0% | |
ACCTTACGCGCCGCATTTGA+AGG | - | chr1_3:60524304-60524323 | Msa0130340:intron | 55.0% | |
GTATCTTGGTGGGGTGGTCT+TGG | + | chr1_3:60524716-60524735 | None:intergenic | 55.0% | |
CACGTACCAGCGATCACTAG+AGG | - | chr1_3:60525323-60525342 | Msa0130340:CDS | 55.0% | |
GATTCGCCTCTAGTGATCGC+TGG | + | chr1_3:60525332-60525351 | None:intergenic | 55.0% | |
GCCTACCAGAACAAGCCTGT+TGG | + | chr1_3:60525539-60525558 | None:intergenic | 55.0% | |
TCCTGGTGACCGGCACACAT+CGG | - | chr1_3:60523301-60523320 | Msa0130340:intron | 60.0% | |
TGTCGGACACCGATGTGTGC+CGG | + | chr1_3:60523313-60523332 | None:intergenic | 60.0% | |
CACAGACTTTGACGCGGACG+CGG | + | chr1_3:60523676-60523695 | None:intergenic | 60.0% | |
GCCTTCAAATGCGGCGCGTA+AGG | + | chr1_3:60524308-60524327 | None:intergenic | 60.0% | |
CGCGCCGCATTTGAAGGCTT+TGG | - | chr1_3:60524310-60524329 | Msa0130340:intron | 60.0% | |
TTGGTCAGCTCCGACGCCTC+TGG | - | chr1_3:60523267-60523286 | Msa0130340:CDS | 65.0% | |
! | ACCGATGTGTGCCGGTCACC+AGG | + | chr1_3:60523305-60523324 | None:intergenic | 65.0% |
TGCACTTGCGGCCTCCTCTG+TGG | + | chr1_3:60524493-60524512 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 60522318 | 60525655 | 60522318 | ID=Msa0130340;Name=Msa0130340 |
chr1_3 | mRNA | 60522318 | 60525655 | 60522318 | ID=Msa0130340-mRNA-1;Parent=Msa0130340;Name=Msa0130340-mRNA-1;_AED=0.02;_eAED=0.02;_QI=119|0.85|0.87|1|0.85|0.75|8|610|296 |
chr1_3 | exon | 60522318 | 60522907 | 60522318 | ID=Msa0130340-mRNA-1:exon:19961;Parent=Msa0130340-mRNA-1 |
chr1_3 | exon | 60523188 | 60523294 | 60523188 | ID=Msa0130340-mRNA-1:exon:19960;Parent=Msa0130340-mRNA-1 |
chr1_3 | exon | 60523416 | 60523543 | 60523416 | ID=Msa0130340-mRNA-1:exon:19959;Parent=Msa0130340-mRNA-1 |
chr1_3 | exon | 60523627 | 60523695 | 60523627 | ID=Msa0130340-mRNA-1:exon:19958;Parent=Msa0130340-mRNA-1 |
chr1_3 | exon | 60523894 | 60523983 | 60523894 | ID=Msa0130340-mRNA-1:exon:19957;Parent=Msa0130340-mRNA-1 |
chr1_3 | exon | 60524822 | 60524887 | 60524822 | ID=Msa0130340-mRNA-1:exon:19956;Parent=Msa0130340-mRNA-1 |
chr1_3 | exon | 60524973 | 60525070 | 60524973 | ID=Msa0130340-mRNA-1:exon:19955;Parent=Msa0130340-mRNA-1 |
chr1_3 | exon | 60525184 | 60525655 | 60525184 | ID=Msa0130340-mRNA-1:exon:19954;Parent=Msa0130340-mRNA-1 |
chr1_3 | five_prime_UTR | 60525537 | 60525655 | 60525537 | ID=Msa0130340-mRNA-1:five_prime_utr;Parent=Msa0130340-mRNA-1 |
chr1_3 | CDS | 60525184 | 60525536 | 60525184 | ID=Msa0130340-mRNA-1:cds;Parent=Msa0130340-mRNA-1 |
chr1_3 | CDS | 60524973 | 60525070 | 60524973 | ID=Msa0130340-mRNA-1:cds;Parent=Msa0130340-mRNA-1 |
chr1_3 | CDS | 60524822 | 60524887 | 60524822 | ID=Msa0130340-mRNA-1:cds;Parent=Msa0130340-mRNA-1 |
chr1_3 | CDS | 60523894 | 60523983 | 60523894 | ID=Msa0130340-mRNA-1:cds;Parent=Msa0130340-mRNA-1 |
chr1_3 | CDS | 60523627 | 60523695 | 60523627 | ID=Msa0130340-mRNA-1:cds;Parent=Msa0130340-mRNA-1 |
chr1_3 | CDS | 60523416 | 60523543 | 60523416 | ID=Msa0130340-mRNA-1:cds;Parent=Msa0130340-mRNA-1 |
chr1_3 | CDS | 60523208 | 60523294 | 60523208 | ID=Msa0130340-mRNA-1:cds;Parent=Msa0130340-mRNA-1 |
chr1_3 | three_prime_UTR | 60523188 | 60523207 | 60523188 | ID=Msa0130340-mRNA-1:three_prime_utr;Parent=Msa0130340-mRNA-1 |
chr1_3 | three_prime_UTR | 60522318 | 60522907 | 60522318 | ID=Msa0130340-mRNA-1:three_prime_utr;Parent=Msa0130340-mRNA-1 |
Gene Sequence |
Protein sequence |