Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0398660 | XP_013459093.2 | 98.010 | 603 | 11 | 1 | 1 | 602 | 1 | 603 | 0.0 | 1187 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0398660 | sp|Q9FNQ0|VIP4_ARATH | 53.165 | 632 | 247 | 18 | 5 | 602 | 5 | 621 | 2.31e-145 | 439 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0398660 | A0A396IKI1 | 98.010 | 603 | 11 | 1 | 1 | 602 | 1 | 603 | 0.0 | 1187 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007440 | Msa0398660 | 0.817263 | 3.610908e-52 | -8.615850e-47 |
| Msa0071250 | Msa0398660 | 0.822272 | 2.589017e-53 | -8.615850e-47 |
| Msa0190120 | Msa0398660 | 0.803039 | 4.217047e-49 | -8.615850e-47 |
| Msa0398660 | Msa0451120 | 0.802834 | 4.649199e-49 | -8.615850e-47 |
| Msa0398660 | Msa0457960 | 0.824986 | 5.995668e-54 | -8.615850e-47 |
| Msa0398660 | Msa0542290 | 0.809135 | 2.197245e-50 | -8.615850e-47 |
| Msa0398660 | Msa0542560 | 0.815090 | 1.104484e-51 | -8.615850e-47 |
| Msa0398660 | Msa0588260 | 0.807848 | 4.135467e-50 | -8.615850e-47 |
| Msa0398660 | Msa0603570 | 0.808796 | 2.597674e-50 | -8.615850e-47 |
| Msa0398660 | Msa0604290 | 0.825184 | 5.384252e-54 | -8.615850e-47 |
| Msa0398660 | Msa0629240 | 0.800178 | 1.628076e-48 | -8.615850e-47 |
| Msa0398660 | Msa0634890 | 0.811081 | 8.365842e-51 | -8.615850e-47 |
| Msa0398660 | Msa0672550 | 0.816024 | 6.845019e-52 | -8.615850e-47 |
| Msa0398660 | Msa0748170 | 0.808923 | 2.439187e-50 | -8.615850e-47 |
| Msa0398660 | Msa0800370 | 0.802173 | 6.360139e-49 | -8.615850e-47 |
| Msa0398660 | Msa0816730 | 0.801249 | 9.843711e-49 | -8.615850e-47 |
| Msa0398660 | Msa0860030 | -0.801654 | 8.129536e-49 | -8.615850e-47 |
| Msa0398660 | Msa0861570 | 0.807346 | 5.287074e-50 | -8.615850e-47 |
| Msa0398660 | Msa0887250 | 0.816731 | 4.753570e-52 | -8.615850e-47 |
| Msa0398660 | Msa0944200 | 0.808391 | 3.169003e-50 | -8.615850e-47 |
| Msa0398660 | Msa0969370 | 0.816932 | 4.286086e-52 | -8.615850e-47 |
| Msa0398660 | Msa1037420 | 0.800006 | 1.764671e-48 | -8.615850e-47 |
| Msa0398660 | Msa1071320 | 0.810891 | 9.198208e-51 | -8.615850e-47 |
| Msa0398660 | Msa1231840 | 0.807603 | 4.663435e-50 | -8.615850e-47 |
| Msa0398660 | Msa1274560 | 0.821757 | 3.407902e-53 | -8.615850e-47 |
| Msa0398660 | Msa1280320 | 0.806707 | 7.217458e-50 | -8.615850e-47 |
| Msa0398660 | Msa1336560 | 0.800666 | 1.295093e-48 | -8.615850e-47 |
| Msa0398660 | Msa1453880 | 0.802157 | 6.409660e-49 | -8.615850e-47 |
| Msa0398660 | Msa1458090 | 0.809745 | 1.625445e-50 | -8.615850e-47 |
| Msa0257490 | Msa0398660 | 0.801055 | 1.078527e-48 | -8.615850e-47 |
| Msa0281530 | Msa0398660 | 0.803971 | 2.702632e-49 | -8.615850e-47 |
| Msa0296790 | Msa0398660 | 0.802394 | 5.729172e-49 | -8.615850e-47 |
| Msa0320590 | Msa0398660 | 0.816129 | 6.482545e-52 | -8.615850e-47 |
| Msa0343850 | Msa0398660 | 0.811937 | 5.451510e-51 | -8.615850e-47 |
| Msa0358860 | Msa0398660 | 0.840305 | 9.421949e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0398660 | MtrunA17_Chr3g0086581 | 98.010 | 603 | 11 | 1 | 1 | 602 | 1 | 603 | 0.0 | 1187 |
| Msa0398660 | MtrunA17_Chr3g0086571 | 97.678 | 603 | 13 | 1 | 1 | 602 | 1 | 603 | 0.0 | 1183 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0398660 | AT5G61150.2 | 53.333 | 630 | 247 | 18 | 5 | 602 | 5 | 619 | 1.21e-146 | 439 |
| Msa0398660 | AT5G61150.1 | 53.165 | 632 | 247 | 18 | 5 | 602 | 5 | 621 | 2.35e-146 | 439 |
Find 172 sgRNAs with CRISPR-Local
Find 599 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGATCTTGCAATTGGAATT+TGG | 0.188152 | 3_2:-20574401 | Msa0398660:CDS |
| TCCCTCTATTCCATGCTTAT+TGG | 0.199766 | 3_2:-20574322 | Msa0398660:CDS |
| TGATGATGAAGAGGAGGATA+TGG | 0.211401 | 3_2:-20578665 | Msa0398660:CDS |
| TCTTCTTCTTCATATGTTCT+AGG | 0.236300 | 3_2:+20577885 | None:intergenic |
| GACTCTTCTCTCTCATCATC+TGG | 0.245899 | 3_2:+20576043 | None:intergenic |
| ACCTTCGTAACTGATGAATT+TGG | 0.248200 | 3_2:-20577861 | Msa0398660:CDS |
| ATTCTGATCTTTGTCATCTC+TGG | 0.249219 | 3_2:+20578735 | None:intergenic |
| CAAAAGAGTAAGAATTTAAA+AGG | 0.255676 | 3_2:-20574847 | Msa0398660:CDS |
| GTTCTAGGATCAAATGGTTT+TGG | 0.256215 | 3_2:+20577900 | None:intergenic |
| AATTCACCTTTCCATGTCTA+AGG | 0.291409 | 3_2:+20576923 | None:intergenic |
| AACACAAGGCAGACCTTTCC+TGG | 0.291986 | 3_2:+20578332 | None:intergenic |
| CCGGAAATTCGTGATGTATT+TGG | 0.297525 | 3_2:-20578694 | Msa0398660:CDS |
| CCAAATACATCACGAATTTC+CGG | 0.297709 | 3_2:+20578694 | None:intergenic |
| AGGCTGAAAGTCAGACTATC+AGG | 0.307554 | 3_2:-20576574 | Msa0398660:CDS |
| GGCTTACGAGGGATGCTCTT+TGG | 0.310503 | 3_2:+20576112 | None:intergenic |
| TGGATCAACTCCCATGATAT+TGG | 0.314016 | 3_2:+20577920 | None:intergenic |
| CAAAGATCAGAATCATGATT+TGG | 0.338229 | 3_2:-20578725 | Msa0398660:CDS |
| ATAATTCAGGATCTTGCAAT+TGG | 0.359118 | 3_2:-20574408 | Msa0398660:intron |
| AGGAGGCGTCAACTTTCTCC+TGG | 0.360444 | 3_2:-20576491 | Msa0398660:CDS |
| GGAAGCCTTCAGTTATTGAT+TGG | 0.366509 | 3_2:-20577003 | Msa0398660:CDS |
| GATGATGAAGAGGAGGATAT+GGG | 0.386378 | 3_2:-20578664 | Msa0398660:CDS |
| CTAACCGTCATTAGAAATAC+AGG | 0.386609 | 3_2:+20574273 | None:intergenic |
| CGTCCACCACCAGCTCTTCC+AGG | 0.388905 | 3_2:-20578350 | Msa0398660:CDS |
| AGTGAAGGTGAGAGGGAGGT+TGG | 0.389661 | 3_2:-20581532 | Msa0398660:CDS |
| GTCATTCGGCGATGGGTTGT+TGG | 0.403588 | 3_2:+20574769 | None:intergenic |
| GTTTAAAGTTTCCAATATCA+TGG | 0.404176 | 3_2:-20577931 | Msa0398660:CDS |
| CTTACAGATGTTGTGCCATC+AGG | 0.408963 | 3_2:+20577780 | None:intergenic |
| ATATGTTGTAAAATATTGTA+AGG | 0.416641 | 3_2:+20574163 | None:intergenic |
| GCAGGATGAAGGAGAGGGAG+GGG | 0.417436 | 3_2:-20581623 | Msa0398660:intron |
| CAAATACATCACGAATTTCC+GGG | 0.420870 | 3_2:+20578695 | None:intergenic |
| GAGGGAGGGGTAGGGCAAGA+AGG | 0.427109 | 3_2:-20581610 | Msa0398660:CDS |
| AAAGGCCTCGTTCTCGTATG+AGG | 0.428907 | 3_2:-20575988 | Msa0398660:CDS |
| TTGAGGATTGGATTCATGTT+CGG | 0.429047 | 3_2:+20581844 | None:intergenic |
| TTCTGATCTTTGTCATCTCT+GGG | 0.431966 | 3_2:+20578736 | None:intergenic |
| GGGTGGGAAAAGTGAAGAAA+AGG | 0.431969 | 3_2:+20581970 | None:intergenic |
| TACCAATAAGCATGGAATAG+AGG | 0.436825 | 3_2:+20574320 | None:intergenic |
| TACAGAATTGAGTTGAGGAT+TGG | 0.437265 | 3_2:+20581832 | None:intergenic |
| TCATATGTTCTAGGATCAAA+TGG | 0.439874 | 3_2:+20577894 | None:intergenic |
| GATGAAGGAGAGGGAGGGGT+AGG | 0.441542 | 3_2:-20581619 | Msa0398660:CDS |
| GGAAGAAGAGAGTGAAGGTA+GGG | 0.445901 | 3_2:-20581497 | Msa0398660:CDS |
| TCATAATCCGTTTCTCTGCT+CGG | 0.449720 | 3_2:+20576237 | None:intergenic |
| TGGATCTGATGATGATGAAC+AGG | 0.450572 | 3_2:-20581398 | Msa0398660:CDS |
| TGGAAGAAGAGAGTGAAGGT+AGG | 0.450961 | 3_2:-20581498 | Msa0398660:CDS |
| GAAGCCTTCAGTTATTGATT+GGG | 0.452323 | 3_2:-20577002 | Msa0398660:CDS |
| AAAGCAATGCTCGCTTTGTA+AGG | 0.456005 | 3_2:-20577035 | Msa0398660:CDS |
| CTGGGTAACCCACTTGGTGC+CGG | 0.457697 | 3_2:+20576062 | None:intergenic |
| AGCAGAGAGTGAAGGTGAGA+GGG | 0.458574 | 3_2:-20581539 | Msa0398660:CDS |
| AGAAGAGAGTGAAGGTAGGG+GGG | 0.466996 | 3_2:-20581494 | Msa0398660:CDS |
| AAGGGGTTTGATTCTGATGA+AGG | 0.470795 | 3_2:-20574811 | Msa0398660:CDS |
| ATTCCTCAGCTAGGTTCCCT+TGG | 0.471615 | 3_2:+20574198 | None:intergenic |
| AAGTTCATCTTCTTCCTCCT+CGG | 0.471897 | 3_2:+20581871 | None:intergenic |
| ACCAATAAGCATGGAATAGA+GGG | 0.472613 | 3_2:+20574321 | None:intergenic |
| GAGGGTGAAGGAGAAGTTGA+AGG | 0.474127 | 3_2:-20581583 | Msa0398660:CDS |
| AGAACAAGAAAATGATGCTT+CGG | 0.474694 | 3_2:-20575915 | Msa0398660:CDS |
| GAGTAAGAATTTAAAAGGTA+AGG | 0.475961 | 3_2:-20574842 | Msa0398660:CDS |
| CATCATCTGGGTAACCCACT+TGG | 0.477731 | 3_2:+20576056 | None:intergenic |
| ACATAATTGTCATTCGGCGA+TGG | 0.478658 | 3_2:+20574761 | None:intergenic |
| TACGCTCTCTCTGTTTGGGT+GGG | 0.484409 | 3_2:+20581954 | None:intergenic |
| GAAGAAGAGAGTGAAGGTAG+GGG | 0.484413 | 3_2:-20581496 | Msa0398660:CDS |
| GTAGGGCAAGAAGGTGAAGA+GGG | 0.486268 | 3_2:-20581601 | Msa0398660:CDS |
| CCTTGTCGTCGAATTCTCAT+CGG | 0.488466 | 3_2:-20576776 | Msa0398660:CDS |
| TTCATCAGCAAGTATATCCT+CGG | 0.493150 | 3_2:+20578463 | None:intergenic |
| AGAGAGTGAAGGTGAGAGGG+AGG | 0.495353 | 3_2:-20581536 | Msa0398660:CDS |
| AAGAAGAGAGTGAAGGTAGG+GGG | 0.497291 | 3_2:-20581495 | Msa0398660:CDS |
| CAGATGATGCAGAATCTCTT+CGG | 0.498212 | 3_2:-20581902 | Msa0398660:CDS |
| CATAATTGTCATTCGGCGAT+GGG | 0.499895 | 3_2:+20574762 | None:intergenic |
| CGTAGGGATGTCGTTGAAAG+TGG | 0.500557 | 3_2:-20581418 | Msa0398660:CDS |
| TATGGGGTACGCAGCTCAGC+AGG | 0.501010 | 3_2:-20578647 | Msa0398660:CDS |
| TGGGTAACCCACTTGGTGCC+GGG | 0.501264 | 3_2:+20576063 | None:intergenic |
| TTTAGAGGATGCTTTGGATG+AGG | 0.502707 | 3_2:-20576465 | Msa0398660:intron |
| GATATACTGCGGAGGAGGAA+GGG | 0.503732 | 3_2:-20578508 | Msa0398660:CDS |
| TAAGCCACTTGGGCCACCAT+TGG | 0.504404 | 3_2:-20578390 | Msa0398660:CDS |
| TTGCAGGATGAAGGAGAGGG+AGG | 0.504951 | 3_2:-20581625 | Msa0398660:intron |
| GGTAGGGCAAGAAGGTGAAG+AGG | 0.505125 | 3_2:-20581602 | Msa0398660:CDS |
| TCTTACCCGTAAGCGCGAAA+AGG | 0.506454 | 3_2:-20576540 | Msa0398660:CDS |
| GTTCCCTGTATTTCTAATGA+CGG | 0.509584 | 3_2:-20574277 | Msa0398660:CDS |
| AAGCAGAGAGTGAAGGTGAG+AGG | 0.510220 | 3_2:-20581540 | Msa0398660:CDS |
| TTTAAAGTTTCCAATATCAT+GGG | 0.510569 | 3_2:-20577930 | Msa0398660:CDS |
| TGCAGGATGAAGGAGAGGGA+GGG | 0.511951 | 3_2:-20581624 | Msa0398660:intron |
| CGCTTTGTAAGGTGGTCTGA+TGG | 0.512150 | 3_2:-20577024 | Msa0398660:CDS |
| AGATATACTGCGGAGGAGGA+AGG | 0.512709 | 3_2:-20578509 | Msa0398660:CDS |
| AGAAGTTGAAGGACAAGGAG+AGG | 0.513372 | 3_2:-20581572 | Msa0398660:CDS |
| AAAGATGTGCTTGATCATGC+TGG | 0.515881 | 3_2:+20576947 | None:intergenic |
| GGTGGGAAAAGTGAAGAAAA+GGG | 0.516791 | 3_2:+20581971 | None:intergenic |
| CAGAAGTCCGAGCAGAGAAA+CGG | 0.518664 | 3_2:-20576244 | Msa0398660:CDS |
| ACGGATTATGAATGCTAAGA+AGG | 0.519536 | 3_2:-20576225 | Msa0398660:intron |
| AAACAAGAAGCGCATACGCT+TGG | 0.520008 | 3_2:-20577838 | Msa0398660:CDS |
| TTACGCTCTCTCTGTTTGGG+TGG | 0.522910 | 3_2:+20581953 | None:intergenic |
| ATGAAGGAGAGGGAGGGGTA+GGG | 0.523344 | 3_2:-20581618 | Msa0398660:CDS |
| ACCTTTCCTGGAAGAGCTGG+TGG | 0.524128 | 3_2:+20578344 | None:intergenic |
| GGAGGTTGGTGATCAGAGAG+TGG | 0.525201 | 3_2:-20581518 | Msa0398660:CDS |
| ACTCTTCTCTCTCATCATCT+GGG | 0.528829 | 3_2:+20576044 | None:intergenic |
| CAGACCTTTCCTGGAAGAGC+TGG | 0.530664 | 3_2:+20578341 | None:intergenic |
| TGTCAGACATAATTGTCATT+CGG | 0.533240 | 3_2:+20574755 | None:intergenic |
| TTTCCTGGAAGAGCTGGTGG+TGG | 0.533508 | 3_2:+20578347 | None:intergenic |
| TCATGATTTGGATTCTGCCC+CGG | 0.536557 | 3_2:-20578713 | Msa0398660:CDS |
| AGAATTCGACGACAAGGAAG+AGG | 0.537175 | 3_2:+20576782 | None:intergenic |
| AGTTGACGCCTCCTCTCAGT+TGG | 0.539785 | 3_2:+20576500 | None:intergenic |
| TAACTGCAATTGTTGACTCA+AGG | 0.540824 | 3_2:-20576749 | Msa0398660:CDS |
| TGAGGCAGAATATGAGGATG+AGG | 0.541830 | 3_2:-20575954 | Msa0398660:CDS |
| CAAGAAGGTGAAGAGGGTGA+AGG | 0.544434 | 3_2:-20581595 | Msa0398660:CDS |
| ATGATGAAGAGGAGGATATG+GGG | 0.546074 | 3_2:-20578663 | Msa0398660:CDS |
| AGAACAATATTGTACGTTGG+AGG | 0.547091 | 3_2:-20577815 | Msa0398660:CDS |
| GGAGGCGTCAACTTTCTCCT+GGG | 0.547641 | 3_2:-20576490 | Msa0398660:CDS |
| TCGAACACAGCGTCACTATG+AGG | 0.549513 | 3_2:-20576279 | Msa0398660:CDS |
| GGTATTGCAGGATGAAGGAG+AGG | 0.549776 | 3_2:-20581629 | Msa0398660:intron |
| AGAAAATGATGCTTCGGATG+AGG | 0.553139 | 3_2:-20575909 | Msa0398660:CDS |
| AACTCCAATGGTGGCCCAAG+TGG | 0.555431 | 3_2:+20578386 | None:intergenic |
| TGATTCTGAGGCAGAATATG+AGG | 0.556925 | 3_2:-20575960 | Msa0398660:CDS |
| GGGAGGAACGATGGCTTACG+AGG | 0.557278 | 3_2:+20576100 | None:intergenic |
| AGACAAAATACCAATAAGCA+TGG | 0.560169 | 3_2:+20574312 | None:intergenic |
| GTAGAGATATACTGCGGAGG+AGG | 0.561855 | 3_2:-20578513 | Msa0398660:intron |
| TCCAAATTCATCAGTTACGA+AGG | 0.563033 | 3_2:+20577860 | None:intergenic |
| TCCCACCAGCAAAATCCTCC+CGG | 0.563107 | 3_2:-20576081 | Msa0398660:CDS |
| AATCTTACAGAATTGAGTTG+AGG | 0.563407 | 3_2:+20581827 | None:intergenic |
| GAAGAAGAAGCAGAGAGTGA+AGG | 0.568085 | 3_2:-20581547 | Msa0398660:CDS |
| ACCACCAGCTCTTCCAGGAA+AGG | 0.568476 | 3_2:-20578345 | Msa0398660:intron |
| CGTTCCCAATCAATAACTGA+AGG | 0.569620 | 3_2:+20576998 | None:intergenic |
| GTAAGCGCGAAAAGGTGAAT+CGG | 0.570993 | 3_2:-20576532 | Msa0398660:CDS |
| TCATCAGCAAGTATATCCTC+GGG | 0.580662 | 3_2:+20578464 | None:intergenic |
| GTGTCGTTACAAGTAAGCGT+AGG | 0.580869 | 3_2:-20581435 | Msa0398660:CDS |
| AAGACGACGAGGAAGAAGAA+AGG | 0.582425 | 3_2:-20576006 | Msa0398660:CDS |
| AAAACTAAAGATAAGCCACT+TGG | 0.583846 | 3_2:-20578401 | Msa0398660:CDS |
| TTTGCTGGTGGGAGGAACGA+TGG | 0.583979 | 3_2:+20576091 | None:intergenic |
| AGAGCATCAGTATGAATCAG+AGG | 0.587246 | 3_2:-20578441 | Msa0398660:CDS |
| TGTTGACTCAAGGCAAAGGA+AGG | 0.588843 | 3_2:-20576739 | Msa0398660:CDS |
| GTATTGCAGGATGAAGGAGA+GGG | 0.588913 | 3_2:-20581628 | Msa0398660:intron |
| AGAGTGGAAGAAGAGAGTGA+AGG | 0.597932 | 3_2:-20581502 | Msa0398660:CDS |
| TGTCGTTACAAGTAAGCGTA+GGG | 0.601258 | 3_2:-20581434 | Msa0398660:CDS |
| AAGGCCTCGTTCTCGTATGA+GGG | 0.602890 | 3_2:-20575987 | Msa0398660:CDS |
| AAAATCCTCCCGGCACCAAG+TGG | 0.609142 | 3_2:-20576071 | Msa0398660:CDS |
| TATGTTGTAAAATATTGTAA+GGG | 0.611877 | 3_2:+20574164 | None:intergenic |
| CAGGGAATTCTGCAATCACA+AGG | 0.612303 | 3_2:-20576834 | Msa0398660:CDS |
| AGTGGAATTTCTAACTCCAA+TGG | 0.614685 | 3_2:+20578374 | None:intergenic |
| GCAATGCTCGCTTTGTAAGG+TGG | 0.615936 | 3_2:-20577032 | Msa0398660:CDS |
| TTTATGGAATTCTAGTCACA+GGG | 0.616797 | 3_2:-20576136 | Msa0398660:intron |
| AAGATGTGCTTGATCATGCT+GGG | 0.617257 | 3_2:+20576948 | None:intergenic |
| GAAGGAGAAGTTGAAGGACA+AGG | 0.620811 | 3_2:-20581577 | Msa0398660:CDS |
| TATGAGGGATGATGATTCTG+AGG | 0.620873 | 3_2:-20575972 | Msa0398660:CDS |
| TTCGGATGAGGACGAAGATG+AGG | 0.623505 | 3_2:-20575897 | Msa0398660:intron |
| TGGAGAACAATATTGTACGT+TGG | 0.625363 | 3_2:-20577818 | Msa0398660:CDS |
| CAATTGTTGACTCAAGGCAA+AGG | 0.626176 | 3_2:-20576743 | Msa0398660:CDS |
| AGAGCTGGTGGTGGACGTAG+TGG | 0.639818 | 3_2:+20578356 | None:intergenic |
| AAATCCTCCCGGCACCAAGT+GGG | 0.639942 | 3_2:-20576070 | Msa0398660:CDS |
| GGCTGAAAGTCAGACTATCA+GGG | 0.640361 | 3_2:-20576573 | Msa0398660:CDS |
| GAATTCGACGACAAGGAAGA+GGG | 0.641254 | 3_2:+20576783 | None:intergenic |
| AGGAAAGTCACAAATCCTGA+TGG | 0.643610 | 3_2:-20577795 | Msa0398660:CDS |
| AAACTAAAGATAAGCCACTT+GGG | 0.644064 | 3_2:-20578400 | Msa0398660:CDS |
| ACTCCAAGGGAACCTAGCTG+AGG | 0.649364 | 3_2:-20574201 | Msa0398660:three_prime_UTR |
| CCGATGAGAATTCGACGACA+AGG | 0.652415 | 3_2:+20576776 | None:intergenic |
| GCATCAGTATGAATCAGAGG+AGG | 0.652612 | 3_2:-20578438 | Msa0398660:CDS |
| TACAGACATTGATCCTGAGA+GGG | 0.652796 | 3_2:-20576694 | Msa0398660:CDS |
| GGAATTTCTAACTCCAATGG+TGG | 0.657203 | 3_2:+20578377 | None:intergenic |
| AATATACTCCAACTGAGAGG+AGG | 0.657581 | 3_2:-20576508 | Msa0398660:CDS |
| TGAAAAGAGCTTGAGACCCG+AGG | 0.658806 | 3_2:-20578480 | Msa0398660:CDS |
| TTACAGACATTGATCCTGAG+AGG | 0.665584 | 3_2:-20576695 | Msa0398660:CDS |
| GGAGGAACGATGGCTTACGA+GGG | 0.667853 | 3_2:+20576101 | None:intergenic |
| AATCACAAGGACAACTATCG+AGG | 0.669259 | 3_2:-20576821 | Msa0398660:CDS |
| AAATACATCACGAATTTCCG+GGG | 0.669442 | 3_2:+20578696 | None:intergenic |
| CACAAGTTCATAGCTCAGAA+CGG | 0.670262 | 3_2:-20582006 | Msa0398660:five_prime_UTR |
| AACACAGCGTCACTATGAGG+AGG | 0.677188 | 3_2:-20576276 | Msa0398660:CDS |
| CTTACGGGTAAGAAGTACGT+TGG | 0.682141 | 3_2:+20576550 | None:intergenic |
| TAACCGTCATTAGAAATACA+GGG | 0.684690 | 3_2:+20574274 | None:intergenic |
| TCATCCCTCATACGAGAACG+AGG | 0.687760 | 3_2:+20575983 | None:intergenic |
| GTAACCCACTTGGTGCCGGG+AGG | 0.688990 | 3_2:+20576066 | None:intergenic |
| GGAAATATACTCCAACTGAG+AGG | 0.696141 | 3_2:-20576511 | Msa0398660:CDS |
| GTTGTAGAGATATACTGCGG+AGG | 0.702989 | 3_2:-20578516 | Msa0398660:intron |
| CCTGTTGTAGAGATATACTG+CGG | 0.709987 | 3_2:-20578519 | Msa0398660:intron |
| CAGCAGCTAGAAGAAGCCTG+AGG | 0.712548 | 3_2:-20581366 | Msa0398660:intron |
| CTTCGGAGATCAATCCGAGG+AGG | 0.714867 | 3_2:-20581885 | Msa0398660:CDS |
| ATATGAAACTGAAGACGACG+AGG | 0.714895 | 3_2:-20576017 | Msa0398660:CDS |
| TCTCTTCGGAGATCAATCCG+AGG | 0.735019 | 3_2:-20581888 | Msa0398660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATAATAATAATTAAA+AGG | + | chr3_2:20576463-20576482 | None:intergenic | 0.0% |
| !! | TAAAAAAAATTATACGAATT+TGG | + | chr3_2:20575263-20575282 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTCTTATTTTAAG+AGG | - | chr3_2:20580875-20580894 | Msa0398660:intron | 10.0% |
| !! | ATGCAAAATAAATAAAAAAA+GGG | + | chr3_2:20581662-20581681 | None:intergenic | 10.0% |
| !! | AATGCAAAATAAATAAAAAA+AGG | + | chr3_2:20581663-20581682 | None:intergenic | 10.0% |
| !! | ATAATTGAGTAATCTTTATA+TGG | + | chr3_2:20576202-20576221 | None:intergenic | 15.0% |
| !! | AATCATATTAAAAACTTCAA+GGG | + | chr3_2:20577005-20577024 | None:intergenic | 15.0% |
| !! | AAATCATATTAAAAACTTCA+AGG | + | chr3_2:20577006-20577025 | None:intergenic | 15.0% |
| !! | AAAAAGTTATCTTAAATTAG+AGG | - | chr3_2:20577330-20577349 | Msa0398660:intron | 15.0% |
| !!! | TTTTTTTGGAAAAAAAATAG+TGG | - | chr3_2:20577454-20577473 | Msa0398660:intron | 15.0% |
| !!! | TTTTTTGGAAAAAAAATAGT+GGG | - | chr3_2:20577455-20577474 | Msa0398660:intron | 15.0% |
| !! | TATATGTTATTGTTAAAATG+AGG | - | chr3_2:20577922-20577941 | Msa0398660:CDS | 15.0% |
| !!! | TAATTTTAGATCTTTGTTAA+TGG | - | chr3_2:20578901-20578920 | Msa0398660:intron | 15.0% |
| !!! | CAATTTTATCTTTGTTTAAT+TGG | - | chr3_2:20580461-20580480 | Msa0398660:intron | 15.0% |
| !!! | AAATATTTTGTACAGATATT+AGG | - | chr3_2:20580594-20580613 | Msa0398660:intron | 15.0% |
| !! | ATAATTCATGTATTTATTCA+AGG | + | chr3_2:20581540-20581559 | None:intergenic | 15.0% |
| !! | TATGTTGTAAAATATTGTAA+GGG | + | chr3_2:20582056-20582075 | None:intergenic | 15.0% |
| !! | ATATGTTGTAAAATATTGTA+AGG | + | chr3_2:20582057-20582076 | None:intergenic | 15.0% |
| !!! | TACAATATTTTACAACATAT+AGG | - | chr3_2:20582057-20582076 | Msa0398660:five_prime_UTR | 15.0% |
| !!! | ACAATATTTTACAACATATA+GGG | - | chr3_2:20582058-20582077 | Msa0398660:five_prime_UTR | 15.0% |
| !! | TACAAATCAATTGAAATTTC+AGG | + | chr3_2:20574495-20574514 | None:intergenic | 20.0% |
| !!! | TATTCTTTTGTATATGCATT+TGG | - | chr3_2:20574524-20574543 | Msa0398660:intron | 20.0% |
| !!! | ATTTGAAATGGTGATTTTTT+TGG | - | chr3_2:20574567-20574586 | Msa0398660:intron | 20.0% |
| !!! | AAATTTTACAATGAAATTGC+TGG | - | chr3_2:20575116-20575135 | Msa0398660:intron | 20.0% |
| !!! | TTTATTTCTAAAAAACCTAG+TGG | + | chr3_2:20575417-20575436 | None:intergenic | 20.0% |
| !! | TAAAAAAAATAGCAGTAAAC+TGG | + | chr3_2:20575965-20575984 | None:intergenic | 20.0% |
| !! | ATAATTAAAAGGTCTAAGAA+AGG | - | chr3_2:20576027-20576046 | Msa0398660:CDS | 20.0% |
| !! | ATAATTAAAAGGTCTAAGAA+AGG | + | chr3_2:20576027-20576046 | None:intergenic | 20.0% |
| !!! | CTGTTTTTTTATAATAAGAG+AGG | + | chr3_2:20576515-20576534 | None:intergenic | 20.0% |
| !! | TTCTCATGGAATAATAAAAT+CGG | + | chr3_2:20576821-20576840 | None:intergenic | 20.0% |
| !! | TTTATTATTCCATGAGAAAA+AGG | - | chr3_2:20576823-20576842 | Msa0398660:CDS | 20.0% |
| !!! | TTTATCACTGTAATTGATTT+CGG | - | chr3_2:20577199-20577218 | Msa0398660:intron | 20.0% |
| !! | AACAATAACATATAGAACAT+AGG | + | chr3_2:20577916-20577935 | None:intergenic | 20.0% |
| !!! | ATTTTTTGTTAGTTCAAAGT+TGG | - | chr3_2:20577990-20578009 | Msa0398660:intron | 20.0% |
| !!! | CTGAATTTTGAAATGTTTAA+AGG | - | chr3_2:20578032-20578051 | Msa0398660:intron | 20.0% |
| !! | TTGTAAAATTCTCATCATTT+AGG | + | chr3_2:20578124-20578143 | None:intergenic | 20.0% |
| !! | GAATGCATATCATATTATAA+AGG | + | chr3_2:20578230-20578249 | None:intergenic | 20.0% |
| !!! | TTTAAAGTTTCCAATATCAT+GGG | - | chr3_2:20578287-20578306 | Msa0398660:intron | 20.0% |
| !!! | AAATGTTTTAAATGTAGACA+TGG | + | chr3_2:20578666-20578685 | None:intergenic | 20.0% |
| !! | TAATTCCAAATCTTTCTTAA+TGG | - | chr3_2:20578685-20578704 | Msa0398660:CDS | 20.0% |
| !!! | TTAAATGCCATTTCATAATT+AGG | + | chr3_2:20578949-20578968 | None:intergenic | 20.0% |
| !! | AATATGTATTACTGTTGATA+TGG | - | chr3_2:20578967-20578986 | Msa0398660:intron | 20.0% |
| !!! | CATTAATGAAGGTTATTTTA+TGG | - | chr3_2:20580065-20580084 | Msa0398660:intron | 20.0% |
| !!! | TGCTTTGGATTTAAAAAAAT+GGG | - | chr3_2:20580726-20580745 | Msa0398660:intron | 20.0% |
| !! | GTTATCAATTAACATTGTTA+TGG | - | chr3_2:20581309-20581328 | Msa0398660:intron | 20.0% |
| !! | CAAAAGAGTAAGAATTTAAA+AGG | - | chr3_2:20581370-20581389 | Msa0398660:CDS | 20.0% |
| !! | CAAAATAAATAAAAAAAGGG+AGG | + | chr3_2:20581659-20581678 | None:intergenic | 20.0% |
| ! | AAAAAGAAAAAAACTACCTC+AGG | + | chr3_2:20574870-20574889 | None:intergenic | 25.0% |
| ! | TCATTAATTAACCACATTGT+TGG | - | chr3_2:20574907-20574926 | Msa0398660:intron | 25.0% |
| ! | CATTAATTAACCACATTGTT+GGG | - | chr3_2:20574908-20574927 | Msa0398660:intron | 25.0% |
| ! | TTTACATCGAAATACATGTT+AGG | + | chr3_2:20574961-20574980 | None:intergenic | 25.0% |
| ! | AACAACATAGTTGTACTAAA+CGG | + | chr3_2:20575050-20575069 | None:intergenic | 25.0% |
| ! | TTAGTACAACTATGTTGTTA+TGG | - | chr3_2:20575051-20575070 | Msa0398660:intron | 25.0% |
| ! | TCATGTAAAAACAACTTTGT+TGG | - | chr3_2:20575307-20575326 | Msa0398660:intron | 25.0% |
| ! | TTTAGAAATAAAGAGTCCTT+TGG | - | chr3_2:20575425-20575444 | Msa0398660:intron | 25.0% |
| ! | TTCTTGAGGAATAATAGAAT+TGG | - | chr3_2:20575652-20575671 | Msa0398660:intron | 25.0% |
| ! | AATAATAGAATTGGCTACTT+TGG | - | chr3_2:20575661-20575680 | Msa0398660:intron | 25.0% |
| ! | ATCATTGGCAAATTATAAGA+AGG | - | chr3_2:20576070-20576089 | Msa0398660:CDS | 25.0% |
| ! | ATAAAAAAACAGCAGTGAAT+TGG | - | chr3_2:20576523-20576542 | Msa0398660:CDS | 25.0% |
| !! | GACATTTTCTATGTTCTATT+TGG | + | chr3_2:20577357-20577376 | None:intergenic | 25.0% |
| ! | TTGAGAAATTTCTGATGTTA+TGG | - | chr3_2:20578085-20578104 | Msa0398660:intron | 25.0% |
| !! | TGATGAGAATTTTACAAGTT+TGG | - | chr3_2:20578127-20578146 | Msa0398660:intron | 25.0% |
| !!! | GTTGAATAGATTTTGACATA+TGG | - | chr3_2:20578169-20578188 | Msa0398660:intron | 25.0% |
| !! | GTTTAAAGTTTCCAATATCA+TGG | - | chr3_2:20578286-20578305 | Msa0398660:intron | 25.0% |
| ! | CTTTAAATATGATTCATGAG+AGG | + | chr3_2:20578871-20578890 | None:intergenic | 25.0% |
| ! | GAAATAGCCTAATTATGAAA+TGG | - | chr3_2:20578939-20578958 | Msa0398660:intron | 25.0% |
| !! | AATGTTTTCCAACCTTTTAA+GGG | - | chr3_2:20579093-20579112 | Msa0398660:intron | 25.0% |
| ! | AAAAAATCTTGTTCATGATC+AGG | - | chr3_2:20579156-20579175 | Msa0398660:intron | 25.0% |
| ! | TTTGGATGAGGTATAAATTT+AGG | - | chr3_2:20579764-20579783 | Msa0398660:intron | 25.0% |
| ! | TTGGATGAGGTATAAATTTA+GGG | - | chr3_2:20579765-20579784 | Msa0398660:intron | 25.0% |
| !!! | GGTATTATTATTTTGTCTCT+AGG | - | chr3_2:20580013-20580032 | Msa0398660:intron | 25.0% |
| !! | TTTTGCGTTAACATTAATGA+AGG | - | chr3_2:20580054-20580073 | Msa0398660:intron | 25.0% |
| !!! | TAATTGGTTTTCTTTTACTC+TGG | - | chr3_2:20580477-20580496 | Msa0398660:intron | 25.0% |
| !! | CTGCTTTGGATTTAAAAAAA+TGG | - | chr3_2:20580725-20580744 | Msa0398660:intron | 25.0% |
| ! | AACAGTCAATAATAGGTATT+CGG | + | chr3_2:20580975-20580994 | None:intergenic | 25.0% |
| ! | AGTCTACAAATTCACTTTAA+AGG | + | chr3_2:20581034-20581053 | None:intergenic | 25.0% |
| ! | AAATGTTAAGAGCAATATTC+AGG | + | chr3_2:20581116-20581135 | None:intergenic | 25.0% |
| !! | ACATTTCCATTTTGTTCATT+TGG | - | chr3_2:20581130-20581149 | Msa0398660:intron | 25.0% |
| !! | CATTTCCATTTTGTTCATTT+GGG | - | chr3_2:20581131-20581150 | Msa0398660:intron | 25.0% |
| ! | AAAAAAACAAGGATAGTGTT+AGG | + | chr3_2:20581213-20581232 | None:intergenic | 25.0% |
| ! | AATACCAGAACAAAAAAACA+AGG | + | chr3_2:20581224-20581243 | None:intergenic | 25.0% |
| ! | TTCTTCTTTACATATCTGTT+AGG | - | chr3_2:20581251-20581270 | Msa0398660:intron | 25.0% |
| ! | GAGTAAGAATTTAAAAGGTA+AGG | - | chr3_2:20581375-20581394 | Msa0398660:CDS | 25.0% |
| ! | CAAAATGAAAATCTGACTTA+CGG | + | chr3_2:20581506-20581525 | None:intergenic | 25.0% |
| ! | CATGTATTTATTCAAGGTTA+AGG | + | chr3_2:20581534-20581553 | None:intergenic | 25.0% |
| ! | ATAAATAAAAAAAGGGAGGA+AGG | + | chr3_2:20581655-20581674 | None:intergenic | 25.0% |
| !! | ATTTTCGTTATCAGTTTTCA+AGG | - | chr3_2:20581680-20581699 | Msa0398660:intron | 25.0% |
| ! | ATTGAAAATCCTACATATGA+TGG | + | chr3_2:20581723-20581742 | None:intergenic | 25.0% |
| !! | AAATTTACTGAGCTTTTCTA+GGG | - | chr3_2:20581747-20581766 | Msa0398660:intron | 25.0% |
| ! | AATCTTACAGAATTGAGTTG+AGG | + | chr3_2:20574393-20574412 | None:intergenic | 30.0% |
| AATTTGAATGAAGCTAGCTA+GGG | + | chr3_2:20574469-20574488 | None:intergenic | 30.0% | |
| ! | ATCGTATTGGCAATTTGAAA+TGG | - | chr3_2:20574555-20574574 | Msa0398660:intron | 30.0% |
| TTTCCTTCTTTCTTTCTGTA+TGG | - | chr3_2:20574999-20575018 | Msa0398660:intron | 30.0% | |
| TTTCCATACAGAAAGAAAGA+AGG | + | chr3_2:20575005-20575024 | None:intergenic | 30.0% | |
| ACAACATAGTTGTACTAAAC+GGG | + | chr3_2:20575049-20575068 | None:intergenic | 30.0% | |
| ! | TTTTACAATGAAATTGCTGG+AGG | - | chr3_2:20575119-20575138 | Msa0398660:intron | 30.0% |
| TATGTGGTTGTTAATTGAAC+TGG | - | chr3_2:20575152-20575171 | Msa0398660:intron | 30.0% | |
| ATGTGGTTGTTAATTGAACT+GGG | - | chr3_2:20575153-20575172 | Msa0398660:intron | 30.0% | |
| ! | CAAAAGCATAAGAATCAAGA+AGG | + | chr3_2:20575457-20575476 | None:intergenic | 30.0% |
| ! | TGCAAGTTAATTTTTCCTGA+TGG | - | chr3_2:20575843-20575862 | Msa0398660:intron | 30.0% |
| ! | AAATAGCAGTAAACTGGTTT+GGG | + | chr3_2:20575959-20575978 | None:intergenic | 30.0% |
| AAAATAGCAGTAAACTGGTT+TGG | + | chr3_2:20575960-20575979 | None:intergenic | 30.0% | |
| AAAAGGTCTAAGAAAGGAAT+TGG | - | chr3_2:20576033-20576052 | Msa0398660:CDS | 30.0% | |
| AAAGGTCTAAGAAAGGAATT+GGG | - | chr3_2:20576034-20576053 | Msa0398660:CDS | 30.0% | |
| AAAGGTCTAAGAAAGGAATT+GGG | + | chr3_2:20576034-20576053 | None:intergenic | 30.0% | |
| AAAAGGTCTAAGAAAGGAAT+TGG | + | chr3_2:20576033-20576052 | None:intergenic | 30.0% | |
| ! | TGCAAGTTAATTTTTCCTGA+TGG | + | chr3_2:20575843-20575862 | None:intergenic | 30.0% |
| ATAATAAAATCGGCTACTTC+TGG | + | chr3_2:20576811-20576830 | None:intergenic | 30.0% | |
| ! | AAATTTGCACCTTTTTCTCA+TGG | + | chr3_2:20576835-20576854 | None:intergenic | 30.0% |
| CACATCCTATAAATCATGAT+CGG | + | chr3_2:20577257-20577276 | None:intergenic | 30.0% | |
| AGTTTCTGATTCTCAATGTT+GGG | + | chr3_2:20577421-20577440 | None:intergenic | 30.0% | |
| CAAAGATCAGAATCATGATT+TGG | - | chr3_2:20577492-20577511 | Msa0398660:intron | 30.0% | |
| AAAACTAAAGATAAGCCACT+TGG | - | chr3_2:20577816-20577835 | Msa0398660:CDS | 30.0% | |
| AAACTAAAGATAAGCCACTT+GGG | - | chr3_2:20577817-20577836 | Msa0398660:CDS | 30.0% | |
| GAACACCAACATATCTTTAA+GGG | - | chr3_2:20578054-20578073 | Msa0398660:intron | 30.0% | |
| AACTTCCCTTAAAGATATGT+TGG | + | chr3_2:20578062-20578081 | None:intergenic | 30.0% | |
| GAAATTTCTGATGTTATGGT+TGG | - | chr3_2:20578089-20578108 | Msa0398660:intron | 30.0% | |
| !! | TCATATGTTCTAGGATCAAA+TGG | + | chr3_2:20578326-20578345 | None:intergenic | 30.0% |
| TCTTCTTCTTCATATGTTCT+AGG | + | chr3_2:20578335-20578354 | None:intergenic | 30.0% | |
| ! | TGTTACAACTAAGAGTGTAA+TGG | + | chr3_2:20578550-20578569 | None:intergenic | 30.0% |
| CCAAACCATTAAGAAAGATT+TGG | + | chr3_2:20578693-20578712 | None:intergenic | 30.0% | |
| CCAAATCTTTCTTAATGGTT+TGG | - | chr3_2:20578690-20578709 | Msa0398660:CDS | 30.0% | |
| ! | ATTCTTCTCCCTTTTACTAA+TGG | - | chr3_2:20578730-20578749 | Msa0398660:CDS | 30.0% |
| AGACCAAACCATTAGTAAAA+GGG | + | chr3_2:20578741-20578760 | None:intergenic | 30.0% | |
| AAGACCAAACCATTAGTAAA+AGG | + | chr3_2:20578742-20578761 | None:intergenic | 30.0% | |
| ! | ACTTAAACCTTTTTCCTGTT+AGG | - | chr3_2:20578809-20578828 | Msa0398660:intron | 30.0% |
| !!! | CTGTTTTTGAGTAAGAGTAT+TGG | - | chr3_2:20579038-20579057 | Msa0398660:intron | 30.0% |
| ! | GAATGTTTTCCAACCTTTTA+AGG | - | chr3_2:20579092-20579111 | Msa0398660:intron | 30.0% |
| GAAATTATTCTGCCCTTAAA+AGG | + | chr3_2:20579108-20579127 | None:intergenic | 30.0% | |
| GGTGAATTTCATTATTCTCA+TGG | - | chr3_2:20579309-20579328 | Msa0398660:intron | 30.0% | |
| GGAAAAAGAAGAAAAGGAAA+AGG | - | chr3_2:20579544-20579563 | Msa0398660:intron | 30.0% | |
| CCTGAAAATGATAGAGAAAT+TGG | + | chr3_2:20579626-20579645 | None:intergenic | 30.0% | |
| ! | CCAATTTCTCTATCATTTTC+AGG | - | chr3_2:20579623-20579642 | Msa0398660:intron | 30.0% |
| TAAAAGACAATAGTGTCTCT+AGG | + | chr3_2:20579798-20579817 | None:intergenic | 30.0% | |
| !! | CATTTGCTGCAATATTTTCT+AGG | - | chr3_2:20579827-20579846 | Msa0398660:intron | 30.0% |
| !! | AAGGGAGCATTGATAAATAA+TGG | + | chr3_2:20579882-20579901 | None:intergenic | 30.0% |
| ! | TTTTATGGAATTCTAGTCAC+AGG | - | chr3_2:20580080-20580099 | Msa0398660:intron | 30.0% |
| TTTATGGAATTCTAGTCACA+GGG | - | chr3_2:20580081-20580100 | Msa0398660:intron | 30.0% | |
| AGAACAAGAAAATGATGCTT+CGG | - | chr3_2:20580302-20580321 | Msa0398660:intron | 30.0% | |
| TGTGAACCAATAAATGGTAA+AGG | + | chr3_2:20580436-20580455 | None:intergenic | 30.0% | |
| GATTGTTGTGAACCAATAAA+TGG | + | chr3_2:20580442-20580461 | None:intergenic | 30.0% | |
| ! | ATGCTTGCAATATTTTGCAT+AGG | - | chr3_2:20580534-20580553 | Msa0398660:intron | 30.0% |
| GCAATCAAATGTTAATGGTT+TGG | + | chr3_2:20580706-20580725 | None:intergenic | 30.0% | |
| AAGCAGCAATCAAATGTTAA+TGG | + | chr3_2:20580711-20580730 | None:intergenic | 30.0% | |
| ! | TTAACATTTGATTGCTGCTT+TGG | - | chr3_2:20580711-20580730 | Msa0398660:intron | 30.0% |
| !! | AATAATGATTAGGTTGGTTC+TGG | + | chr3_2:20580759-20580778 | None:intergenic | 30.0% |
| AGAACCAACCTAATCATTAT+TGG | - | chr3_2:20580758-20580777 | Msa0398660:intron | 30.0% | |
| GAACCAACCTAATCATTATT+GGG | - | chr3_2:20580759-20580778 | Msa0398660:intron | 30.0% | |
| AAACCAACCCAATAATGATT+AGG | + | chr3_2:20580769-20580788 | None:intergenic | 30.0% | |
| TCAACACAACAGTCAATAAT+AGG | + | chr3_2:20580982-20581001 | None:intergenic | 30.0% | |
| CAAAACCCAAATGAACAAAA+TGG | + | chr3_2:20581139-20581158 | None:intergenic | 30.0% | |
| ACAAAGCTTAATAAGGAACT+CGG | + | chr3_2:20581165-20581184 | None:intergenic | 30.0% | |
| CACTGAAACAAAGCTTAATA+AGG | + | chr3_2:20581172-20581191 | None:intergenic | 30.0% | |
| !!! | CTATCCTTGTTTTTTTGTTC+TGG | - | chr3_2:20581217-20581236 | Msa0398660:intron | 30.0% |
| ACTATTTCATGTTTACTTGC+AGG | - | chr3_2:20581339-20581358 | Msa0398660:intron | 30.0% | |
| CTATTTCATGTTTACTTGCA+GGG | - | chr3_2:20581340-20581359 | Msa0398660:intron | 30.0% | |
| TGTCAGACATAATTGTCATT+CGG | + | chr3_2:20581465-20581484 | None:intergenic | 30.0% | |
| !! | GTTATTTTGCCATCATATGT+AGG | - | chr3_2:20581711-20581730 | Msa0398660:intron | 30.0% |
| ! | GAAATTTACTGAGCTTTTCT+AGG | - | chr3_2:20581746-20581765 | Msa0398660:intron | 30.0% |
| TGCTTCTTCTTCTATAATTC+AGG | - | chr3_2:20581796-20581815 | Msa0398660:intron | 30.0% | |
| ATAATTCAGGATCTTGCAAT+TGG | - | chr3_2:20581809-20581828 | Msa0398660:intron | 30.0% | |
| TTTGGAAAGAAAAATGCTCT+TGG | - | chr3_2:20581834-20581853 | Msa0398660:intron | 30.0% | |
| TTGGAAAGAAAAATGCTCTT+GGG | - | chr3_2:20581835-20581854 | Msa0398660:CDS | 30.0% | |
| AGACAAAATACCAATAAGCA+TGG | + | chr3_2:20581908-20581927 | None:intergenic | 30.0% | |
| TAACCGTCATTAGAAATACA+GGG | + | chr3_2:20581946-20581965 | None:intergenic | 30.0% | |
| !!! | TGTTCTAAAGTTTTACTCCA+AGG | - | chr3_2:20582002-20582021 | Msa0398660:five_prime_UTR | 30.0% |
| !!! | GTTCTAAAGTTTTACTCCAA+GGG | - | chr3_2:20582003-20582022 | Msa0398660:five_prime_UTR | 30.0% |
| ! | TTTTTACGCTCTCTCTGTTT+GGG | + | chr3_2:20574270-20574289 | None:intergenic | 35.0% |
| !!! | TTTTTTACGCTCTCTCTGTT+TGG | + | chr3_2:20574271-20574290 | None:intergenic | 35.0% |
| ! | ACAGAGAGAGCGTAAAAAAA+TGG | - | chr3_2:20574272-20574291 | Msa0398660:exon | 35.0% |
| ! | CAGAGAGAGCGTAAAAAAAT+GGG | - | chr3_2:20574273-20574292 | Msa0398660:CDS | 35.0% |
| ! | AGAGAGAGCGTAAAAAAATG+GGG | - | chr3_2:20574274-20574293 | Msa0398660:CDS | 35.0% |
| TTGAGGATTGGATTCATGTT+CGG | + | chr3_2:20574376-20574395 | None:intergenic | 35.0% | |
| !! | TACAGAATTGAGTTGAGGAT+TGG | + | chr3_2:20574388-20574407 | None:intergenic | 35.0% |
| GAATTTGAATGAAGCTAGCT+AGG | + | chr3_2:20574470-20574489 | None:intergenic | 35.0% | |
| TTTGGAAGATCGTATCGTAT+TGG | - | chr3_2:20574542-20574561 | Msa0398660:intron | 35.0% | |
| !!! | GGTGATTTTTTTGGTATTGC+AGG | - | chr3_2:20574576-20574595 | Msa0398660:intron | 35.0% |
| !! | TTTTTGGTATTGCAGGATGA+AGG | - | chr3_2:20574583-20574602 | Msa0398660:intron | 35.0% |
| AATTAACCACATTGTTGGGT+TGG | - | chr3_2:20574912-20574931 | Msa0398660:intron | 35.0% | |
| GTAGAGAAATGTGGAATCTT+GGG | + | chr3_2:20575373-20575392 | None:intergenic | 35.0% | |
| ATCTTAAGCGTAGAGAAATG+TGG | + | chr3_2:20575382-20575401 | None:intergenic | 35.0% | |
| AAATTTGCACGTGTTTCTTG+AGG | - | chr3_2:20575638-20575657 | Msa0398660:intron | 35.0% | |
| TTTCTCTTTCTCTCATTCTC+TGG | - | chr3_2:20575795-20575814 | Msa0398660:intron | 35.0% | |
| TTCTCTTTCTCTCATTCTCT+GGG | - | chr3_2:20575796-20575815 | Msa0398660:intron | 35.0% | |
| ATACACAAGATTGACGACAA+AGG | + | chr3_2:20576334-20576353 | None:intergenic | 35.0% | |
| TTGTCGTCAATCTTGTGTAT+CGG | - | chr3_2:20576334-20576353 | Msa0398660:intron | 35.0% | |
| AAAACAGCAGTGAATTGGTT+TGG | - | chr3_2:20576528-20576547 | Msa0398660:CDS | 35.0% | |
| ! | AAACAGCAGTGAATTGGTTT+GGG | - | chr3_2:20576529-20576548 | Msa0398660:CDS | 35.0% |
| ! | CCTCTTTTTCTCATTCTCTT+GGG | + | chr3_2:20576681-20576700 | None:intergenic | 35.0% |
| ! | TCCTCTTTTTCTCATTCTCT+TGG | + | chr3_2:20576682-20576701 | None:intergenic | 35.0% |
| !!! | TCCTCATTTTTTTTCCCTCT+TGG | - | chr3_2:20577113-20577132 | Msa0398660:intron | 35.0% |
| !!! | CCTCATTTTTTTTCCCTCTT+GGG | - | chr3_2:20577114-20577133 | Msa0398660:intron | 35.0% |
| !!! | CTCATTTTTTTTCCCTCTTG+GGG | - | chr3_2:20577115-20577134 | Msa0398660:intron | 35.0% |
| GATAATATGAATCCCCAAGA+GGG | + | chr3_2:20577130-20577149 | None:intergenic | 35.0% | |
| AGATAATATGAATCCCCAAG+AGG | + | chr3_2:20577131-20577150 | None:intergenic | 35.0% | |
| AACTTAGCTCAGCAGAAAAT+AGG | + | chr3_2:20577155-20577174 | None:intergenic | 35.0% | |
| TACGTCCGATCATGATTTAT+AGG | - | chr3_2:20577249-20577268 | Msa0398660:intron | 35.0% | |
| AGTATAGAACAGAATAGCAC+AGG | + | chr3_2:20577283-20577302 | None:intergenic | 35.0% | |
| AATTGTGCAAGCTGAATCTT+GGG | + | chr3_2:20577386-20577405 | None:intergenic | 35.0% | |
| AAATTGTGCAAGCTGAATCT+TGG | + | chr3_2:20577387-20577406 | None:intergenic | 35.0% | |
| CAGTTTCTGATTCTCAATGT+TGG | + | chr3_2:20577422-20577441 | None:intergenic | 35.0% | |
| TTCTGATCTTTGTCATCTCT+GGG | + | chr3_2:20577484-20577503 | None:intergenic | 35.0% | |
| ATTCTGATCTTTGTCATCTC+TGG | + | chr3_2:20577485-20577504 | None:intergenic | 35.0% | |
| AAATACATCACGAATTTCCG+GGG | + | chr3_2:20577524-20577543 | None:intergenic | 35.0% | |
| CAAATACATCACGAATTTCC+GGG | + | chr3_2:20577525-20577544 | None:intergenic | 35.0% | |
| CCAAATACATCACGAATTTC+CGG | + | chr3_2:20577526-20577545 | None:intergenic | 35.0% | |
| !!! | TGGTGATTTTGATGATGAAG+AGG | - | chr3_2:20577543-20577562 | Msa0398660:intron | 35.0% |
| !!! | TGATTTTGATGATGAAGAGG+AGG | - | chr3_2:20577546-20577565 | Msa0398660:intron | 35.0% |
| TTCATCAGCAAGTATATCCT+CGG | + | chr3_2:20577757-20577776 | None:intergenic | 35.0% | |
| AGTGGAATTTCTAACTCCAA+TGG | + | chr3_2:20577846-20577865 | None:intergenic | 35.0% | |
| GGAACACCAACATATCTTTA+AGG | - | chr3_2:20578053-20578072 | Msa0398660:intron | 35.0% | |
| GACATATGGTATCACTCTAT+TGG | - | chr3_2:20578183-20578202 | Msa0398660:intron | 35.0% | |
| ! | AAGGTGTTCTATGTGTAGTT+AGG | + | chr3_2:20578211-20578230 | None:intergenic | 35.0% |
| !!! | GTTCTAGGATCAAATGGTTT+TGG | + | chr3_2:20578320-20578339 | None:intergenic | 35.0% |
| ACCTTCGTAACTGATGAATT+TGG | - | chr3_2:20578356-20578375 | Msa0398660:CDS | 35.0% | |
| TCCAAATTCATCAGTTACGA+AGG | + | chr3_2:20578360-20578379 | None:intergenic | 35.0% | |
| TGGAGAACAATATTGTACGT+TGG | - | chr3_2:20578399-20578418 | Msa0398660:CDS | 35.0% | |
| AGAACAATATTGTACGTTGG+AGG | - | chr3_2:20578402-20578421 | Msa0398660:CDS | 35.0% | |
| ! | CTTTCCTTCTTTTACATCCA+TGG | - | chr3_2:20578514-20578533 | Msa0398660:intron | 35.0% |
| CTTACCATGGATGTAAAAGA+AGG | + | chr3_2:20578521-20578540 | None:intergenic | 35.0% | |
| ! | TCTTTTACATCCATGGTAAG+TGG | - | chr3_2:20578521-20578540 | Msa0398660:intron | 35.0% |
| !! | AAAGGCTTTATGGGATTTTG+TGG | + | chr3_2:20578578-20578597 | None:intergenic | 35.0% |
| ! | TCATTGGTCAAAGGCTTTAT+GGG | + | chr3_2:20578587-20578606 | None:intergenic | 35.0% |
| ! | TCTCCCTTTTACTAATGGTT+TGG | - | chr3_2:20578735-20578754 | Msa0398660:CDS | 35.0% |
| ATTTATTGACCAAGCCTAAC+AGG | + | chr3_2:20578826-20578845 | None:intergenic | 35.0% | |
| GCTTGGTCAATAAATGAATC+AGG | - | chr3_2:20578831-20578850 | Msa0398660:intron | 35.0% | |
| ! | GTATTGGCAAACTGAGTTAT+TGG | - | chr3_2:20579054-20579073 | Msa0398660:intron | 35.0% |
| TTATTCTGCCCTTAAAAGGT+TGG | + | chr3_2:20579104-20579123 | None:intergenic | 35.0% | |
| ! | GAAGCCTTCAGTTATTGATT+GGG | - | chr3_2:20579215-20579234 | Msa0398660:intron | 35.0% |
| ! | TCTTTTCCTTAGACATGGAA+AGG | - | chr3_2:20579288-20579307 | Msa0398660:intron | 35.0% |
| AATTCACCTTTCCATGTCTA+AGG | + | chr3_2:20579297-20579316 | None:intergenic | 35.0% | |
| ! | GATTTACTGTTTCTCCTCAA+TGG | - | chr3_2:20579342-20579361 | Msa0398660:intron | 35.0% |
| ACTATGTGCACTTGTTTACA+GGG | - | chr3_2:20579365-20579384 | Msa0398660:intron | 35.0% | |
| !! | TAACTGCAATTGTTGACTCA+AGG | - | chr3_2:20579468-20579487 | Msa0398660:intron | 35.0% |
| ! | TTTTCTTCTTTTTCCCTCTC+AGG | + | chr3_2:20579539-20579558 | None:intergenic | 35.0% |
| TGAGAGGGAAAAAGAAGAAA+AGG | - | chr3_2:20579538-20579557 | Msa0398660:intron | 35.0% | |
| ! | ACGGATTATGAATGCTAAGA+AGG | - | chr3_2:20579992-20580011 | Msa0398660:intron | 35.0% |
| TGCACTAACAGAAAGTAAAC+TGG | + | chr3_2:20580413-20580432 | None:intergenic | 35.0% | |
| AGTGCACCTTTACCATTTAT+TGG | - | chr3_2:20580427-20580446 | Msa0398660:intron | 35.0% | |
| !! | TTGGTTTTCTTTTACTCTGG+CGG | - | chr3_2:20580480-20580499 | Msa0398660:intron | 35.0% |
| CTTCTTGTCAGTTGTTAAAG+TGG | - | chr3_2:20580566-20580585 | Msa0398660:intron | 35.0% | |
| TTATGTGCCTTGATTCATGT+TGG | - | chr3_2:20580621-20580640 | Msa0398660:intron | 35.0% | |
| TATGTGCCTTGATTCATGTT+GGG | - | chr3_2:20580622-20580641 | Msa0398660:intron | 35.0% | |
| AAAGTTCCCAACATGAATCA+AGG | + | chr3_2:20580631-20580650 | None:intergenic | 35.0% | |
| TTGATTCATGTTGGGAACTT+TGG | - | chr3_2:20580630-20580649 | Msa0398660:intron | 35.0% | |
| CAACCCAATAATGATTAGGT+TGG | + | chr3_2:20580765-20580784 | None:intergenic | 35.0% | |
| CAACCTAATCATTATTGGGT+TGG | - | chr3_2:20580763-20580782 | Msa0398660:intron | 35.0% | |
| !! | ATTATTGGGTTGGTTTGAGT+TGG | - | chr3_2:20580773-20580792 | Msa0398660:intron | 35.0% |
| !! | TTATTGGGTTGGTTTGAGTT+GGG | - | chr3_2:20580774-20580793 | Msa0398660:intron | 35.0% |
| GTAGCTATATCTCATAGGAT+CGG | + | chr3_2:20580840-20580859 | None:intergenic | 35.0% | |
| CATCAGTAGCTATATCTCAT+AGG | + | chr3_2:20580845-20580864 | None:intergenic | 35.0% | |
| CTATGAGATATAGCTACTGA+TGG | - | chr3_2:20580843-20580862 | Msa0398660:intron | 35.0% | |
| TCGGTAATGCTAACAAATCT+TGG | + | chr3_2:20580956-20580975 | None:intergenic | 35.0% | |
| AAAAGGTAAGGCCAAAAAGA+AGG | - | chr3_2:20581387-20581406 | Msa0398660:CDS | 35.0% | |
| AAAGGTAAGGCCAAAAAGAA+GGG | - | chr3_2:20581388-20581407 | Msa0398660:CDS | 35.0% | |
| ! | AGAATCAAACCCCTTCTTTT+TGG | + | chr3_2:20581401-20581420 | None:intergenic | 35.0% |
| ACACATGGTTTATCATCTCA+TGG | + | chr3_2:20581578-20581597 | None:intergenic | 35.0% | |
| ! | CTTTTGCTAGCAAAAACACA+TGG | + | chr3_2:20581593-20581612 | None:intergenic | 35.0% |
| !! | TGTGTTTTTGCTAGCAAAAG+AGG | - | chr3_2:20581593-20581612 | Msa0398660:CDS | 35.0% |
| !! | GTGTTTTTGCTAGCAAAAGA+GGG | - | chr3_2:20581594-20581613 | Msa0398660:CDS | 35.0% |
| !! | TGTTTTTGCTAGCAAAAGAG+GGG | - | chr3_2:20581595-20581614 | Msa0398660:CDS | 35.0% |
| TAAAAAAAGGGAGGAAGGAA+GGG | + | chr3_2:20581650-20581669 | None:intergenic | 35.0% | |
| ATAAAAAAAGGGAGGAAGGA+AGG | + | chr3_2:20581651-20581670 | None:intergenic | 35.0% | |
| AGGATCTTGCAATTGGAATT+TGG | - | chr3_2:20581816-20581835 | Msa0398660:intron | 35.0% | |
| ACCAATAAGCATGGAATAGA+GGG | + | chr3_2:20581899-20581918 | None:intergenic | 35.0% | |
| TACCAATAAGCATGGAATAG+AGG | + | chr3_2:20581900-20581919 | None:intergenic | 35.0% | |
| ! | GCTTATTGGTATTTTGTCTC+AGG | - | chr3_2:20581909-20581928 | Msa0398660:CDS | 35.0% |
| ! | GTTCCCTGTATTTCTAATGA+CGG | - | chr3_2:20581940-20581959 | Msa0398660:exon | 35.0% |
| CTAACCGTCATTAGAAATAC+AGG | + | chr3_2:20581947-20581966 | None:intergenic | 35.0% | |
| CACAAGTTCATAGCTCAGAA+CGG | - | chr3_2:20574211-20574230 | Msa0398660:three_prime_UTR | 40.0% | |
| GGTGGGAAAAGTGAAGAAAA+GGG | + | chr3_2:20574249-20574268 | None:intergenic | 40.0% | |
| ! | GAGAGAGCGTAAAAAAATGG+GGG | - | chr3_2:20574275-20574294 | Msa0398660:CDS | 40.0% |
| ! | AGAGAGCGTAAAAAAATGGG+GGG | - | chr3_2:20574276-20574295 | Msa0398660:CDS | 40.0% |
| CAGATGATGCAGAATCTCTT+CGG | - | chr3_2:20574315-20574334 | Msa0398660:CDS | 40.0% | |
| AAGTTCATCTTCTTCCTCCT+CGG | + | chr3_2:20574349-20574368 | None:intergenic | 40.0% | |
| TGTCGTTACAAGTAAGCGTA+GGG | - | chr3_2:20574783-20574802 | Msa0398660:CDS | 40.0% | |
| ! | TGGATCTGATGATGATGAAC+AGG | - | chr3_2:20574819-20574838 | Msa0398660:CDS | 40.0% |
| CATAGTTGTACTAAACGGGT+AGG | + | chr3_2:20575045-20575064 | None:intergenic | 40.0% | |
| TAACCCGAGCTAATCATTGT+TGG | - | chr3_2:20575087-20575106 | Msa0398660:intron | 40.0% | |
| CAAATACCACTTTACGTTGC+AGG | + | chr3_2:20575216-20575235 | None:intergenic | 40.0% | |
| TGCAAAGATGTTGCTATGCA+GGG | - | chr3_2:20575334-20575353 | Msa0398660:intron | 40.0% | |
| CGTAGAGAAATGTGGAATCT+TGG | + | chr3_2:20575374-20575393 | None:intergenic | 40.0% | |
| GATTTGTGAGTCTAACCACT+AGG | - | chr3_2:20575399-20575418 | Msa0398660:intron | 40.0% | |
| ATCAAGAAGGACTACACCAA+AGG | + | chr3_2:20575444-20575463 | None:intergenic | 40.0% | |
| !!! | TTCCACTCAGTTGTTTTAGC+TGG | - | chr3_2:20575505-20575524 | Msa0398660:intron | 40.0% |
| !!! | TCCACTCAGTTGTTTTAGCT+GGG | - | chr3_2:20575506-20575525 | Msa0398660:intron | 40.0% |
| !! | TTTTCCTGATGGTGAGAAGA+TGG | - | chr3_2:20575854-20575873 | Msa0398660:intron | 40.0% |
| GGAGCATAGGGAATTGAAAA+CGG | - | chr3_2:20575875-20575894 | Msa0398660:intron | 40.0% | |
| GGTTAAAGAGTTCACTGAAG+AGG | - | chr3_2:20575905-20575924 | Msa0398660:CDS | 40.0% | |
| TAAAGAGTTCACTGAAGAGG+AGG | - | chr3_2:20575908-20575927 | Msa0398660:CDS | 40.0% | |
| AAAGAGTTCACTGAAGAGGA+GGG | - | chr3_2:20575909-20575928 | Msa0398660:CDS | 40.0% | |
| AAGAGGAATATTGGGCACTT+GGG | - | chr3_2:20575933-20575952 | Msa0398660:CDS | 40.0% | |
| GATGTGGTTGGAAATGAAAC+TGG | + | chr3_2:20576124-20576143 | None:intergenic | 40.0% | |
| ATACACGAGATTGACGACAA+AGG | - | chr3_2:20576145-20576164 | Msa0398660:intron | 40.0% | |
| TTTCAAATCCGACAAGCTTC+AGG | - | chr3_2:20576248-20576267 | Msa0398660:CDS | 40.0% | |
| TCTCTTAACCTGAAGCTTGT+CGG | + | chr3_2:20576259-20576278 | None:intergenic | 40.0% | |
| GTGTAGCTGGAAATGAAACT+GGG | - | chr3_2:20576356-20576375 | Msa0398660:intron | 40.0% | |
| ATTTCTTGATCTGAACACGC+TGG | + | chr3_2:20576382-20576401 | None:intergenic | 40.0% | |
| AAGAGGAATATTGGGCACTT+GGG | + | chr3_2:20575933-20575952 | None:intergenic | 40.0% | |
| GTTCGCTGAAGAGGAATATT+GGG | + | chr3_2:20576563-20576582 | None:intergenic | 40.0% | |
| AGTTCGCTGAAGAGGAATAT+TGG | + | chr3_2:20576564-20576583 | None:intergenic | 40.0% | |
| AGCATAGGGAATTGTAAACG+GGG | + | chr3_2:20576600-20576619 | None:intergenic | 40.0% | |
| GAGCATAGGGAATTGTAAAC+GGG | + | chr3_2:20576601-20576620 | None:intergenic | 40.0% | |
| GGAGCATAGGGAATTGTAAA+CGG | + | chr3_2:20576602-20576621 | None:intergenic | 40.0% | |
| !! | TTTTCCTGATGGTGAGAAGA+TGG | + | chr3_2:20575854-20575873 | None:intergenic | 40.0% |
| CCCAAGAGAATGAGAAAAAG+AGG | - | chr3_2:20576678-20576697 | Msa0398660:CDS | 40.0% | |
| ! | AAAAGGTGCAAATTTCACCC+TGG | - | chr3_2:20576840-20576859 | Msa0398660:intron | 40.0% |
| ATAAAGTGAGTCCTTGTTGC+GGG | + | chr3_2:20576927-20576946 | None:intergenic | 40.0% | |
| CATAAAGTGAGTCCTTGTTG+CGG | + | chr3_2:20576928-20576947 | None:intergenic | 40.0% | |
| CCCAAGAGGGAAAAAAAATG+AGG | + | chr3_2:20577117-20577136 | None:intergenic | 40.0% | |
| CCGGAAATTCGTGATGTATT+TGG | - | chr3_2:20577523-20577542 | Msa0398660:intron | 40.0% | |
| ! | TGATGATGAAGAGGAGGATA+TGG | - | chr3_2:20577552-20577571 | Msa0398660:intron | 40.0% |
| GATGATGAAGAGGAGGATAT+GGG | - | chr3_2:20577553-20577572 | Msa0398660:intron | 40.0% | |
| ATGATGAAGAGGAGGATATG+GGG | - | chr3_2:20577554-20577573 | Msa0398660:intron | 40.0% | |
| CCTGTTGTAGAGATATACTG+CGG | - | chr3_2:20577698-20577717 | Msa0398660:intron | 40.0% | |
| TCATCAGCAAGTATATCCTC+GGG | + | chr3_2:20577756-20577775 | None:intergenic | 40.0% | |
| ! | AGAGCATCAGTATGAATCAG+AGG | - | chr3_2:20577776-20577795 | Msa0398660:intron | 40.0% |
| GGAATTTCTAACTCCAATGG+TGG | + | chr3_2:20577843-20577862 | None:intergenic | 40.0% | |
| CACAAATGAGAGGCTGTTAT+AGG | + | chr3_2:20578252-20578271 | None:intergenic | 40.0% | |
| ATAACAGCCTCTCATTTGTG+TGG | - | chr3_2:20578252-20578271 | Msa0398660:intron | 40.0% | |
| TGGATCAACTCCCATGATAT+TGG | + | chr3_2:20578300-20578319 | None:intergenic | 40.0% | |
| AGGAAAGTCACAAATCCTGA+TGG | - | chr3_2:20578422-20578441 | Msa0398660:CDS | 40.0% | |
| GTCATTGGTCAAAGGCTTTA+TGG | + | chr3_2:20578588-20578607 | None:intergenic | 40.0% | |
| ! | AACCTTTTTCCTGTTAGGCT+TGG | - | chr3_2:20578814-20578833 | Msa0398660:intron | 40.0% |
| AAAGCAATGCTCGCTTTGTA+AGG | - | chr3_2:20579182-20579201 | Msa0398660:intron | 40.0% | |
| GGAAGCCTTCAGTTATTGAT+TGG | - | chr3_2:20579214-20579233 | Msa0398660:intron | 40.0% | |
| CGTTCCCAATCAATAACTGA+AGG | + | chr3_2:20579222-20579241 | None:intergenic | 40.0% | |
| AAGATGTGCTTGATCATGCT+GGG | + | chr3_2:20579272-20579291 | None:intergenic | 40.0% | |
| AAAGATGTGCTTGATCATGC+TGG | + | chr3_2:20579273-20579292 | None:intergenic | 40.0% | |
| ! | GCACATCTTTTCCTTAGACA+TGG | - | chr3_2:20579283-20579302 | Msa0398660:intron | 40.0% |
| GACTATGTGCACTTGTTTAC+AGG | - | chr3_2:20579364-20579383 | Msa0398660:intron | 40.0% | |
| AATCACAAGGACAACTATCG+AGG | - | chr3_2:20579396-20579415 | Msa0398660:intron | 40.0% | |
| !! | CAATTGTTGACTCAAGGCAA+AGG | - | chr3_2:20579474-20579493 | Msa0398660:intron | 40.0% |
| TTACAGACATTGATCCTGAG+AGG | - | chr3_2:20579522-20579541 | Msa0398660:intron | 40.0% | |
| TACAGACATTGATCCTGAGA+GGG | - | chr3_2:20579523-20579542 | Msa0398660:intron | 40.0% | |
| GGAAATATACTCCAACTGAG+AGG | - | chr3_2:20579706-20579725 | Msa0398660:intron | 40.0% | |
| AATATACTCCAACTGAGAGG+AGG | - | chr3_2:20579709-20579728 | Msa0398660:intron | 40.0% | |
| !! | ACTTTCTCCTGGGTTTTTAG+AGG | - | chr3_2:20579737-20579756 | Msa0398660:intron | 40.0% |
| ! | AAAGCATCCTCTAAAAACCC+AGG | + | chr3_2:20579747-20579766 | None:intergenic | 40.0% |
| !! | TGGGTTTTTAGAGGATGCTT+TGG | - | chr3_2:20579746-20579765 | Msa0398660:intron | 40.0% |
| ! | TTTAGAGGATGCTTTGGATG+AGG | - | chr3_2:20579752-20579771 | Msa0398660:intron | 40.0% |
| GGAACTGACACAGTTTAAGT+AGG | + | chr3_2:20579861-20579880 | None:intergenic | 40.0% | |
| TATCAATGCTCCCTTTCTTC+AGG | - | chr3_2:20579887-20579906 | Msa0398660:intron | 40.0% | |
| TCATAATCCGTTTCTCTGCT+CGG | + | chr3_2:20579983-20580002 | None:intergenic | 40.0% | |
| ACTCTTCTCTCTCATCATCT+GGG | + | chr3_2:20580176-20580195 | None:intergenic | 40.0% | |
| ATATGAAACTGAAGACGACG+AGG | - | chr3_2:20580200-20580219 | Msa0398660:intron | 40.0% | |
| TATGAGGGATGATGATTCTG+AGG | - | chr3_2:20580245-20580264 | Msa0398660:intron | 40.0% | |
| !! | TGATTCTGAGGCAGAATATG+AGG | - | chr3_2:20580257-20580276 | Msa0398660:intron | 40.0% |
| AGAAAATGATGCTTCGGATG+AGG | - | chr3_2:20580308-20580327 | Msa0398660:intron | 40.0% | |
| ! | ATGTTGGGAACTTTGGAAGT+AGG | - | chr3_2:20580637-20580656 | Msa0398660:intron | 40.0% |
| ! | TGTTGGGAACTTTGGAAGTA+GGG | - | chr3_2:20580638-20580657 | Msa0398660:intron | 40.0% |
| !!! | CCGTTGTTTTTCCTCATCAA+CGG | + | chr3_2:20580916-20580935 | None:intergenic | 40.0% |
| ! | CCGTTGATGAGGAAAAACAA+CGG | - | chr3_2:20580913-20580932 | Msa0398660:intron | 40.0% |
| CATACATTAGTGCATTCCGT+AGG | + | chr3_2:20581284-20581303 | None:intergenic | 40.0% | |
| AAGGTAAGGCCAAAAAGAAG+GGG | - | chr3_2:20581389-20581408 | Msa0398660:CDS | 40.0% | |
| AAGGGGTTTGATTCTGATGA+AGG | - | chr3_2:20581406-20581425 | Msa0398660:CDS | 40.0% | |
| !!! | GTTGTTGGTTTTTTAGGAGG+AGG | + | chr3_2:20581436-20581455 | None:intergenic | 40.0% |
| !!! | TGGGTTGTTGGTTTTTTAGG+AGG | + | chr3_2:20581439-20581458 | None:intergenic | 40.0% |
| !!! | CGATGGGTTGTTGGTTTTTT+AGG | + | chr3_2:20581442-20581461 | None:intergenic | 40.0% |
| CATAATTGTCATTCGGCGAT+GGG | + | chr3_2:20581458-20581477 | None:intergenic | 40.0% | |
| ACATAATTGTCATTCGGCGA+TGG | + | chr3_2:20581459-20581478 | None:intergenic | 40.0% | |
| ! | GTTTTTGCTAGCAAAAGAGG+GGG | - | chr3_2:20581596-20581615 | Msa0398660:CDS | 40.0% |
| AAGGAAGGGGAAATTGCAAA+AGG | + | chr3_2:20581636-20581655 | None:intergenic | 40.0% | |
| AAAAAAAGGGAGGAAGGAAG+GGG | + | chr3_2:20581649-20581668 | None:intergenic | 40.0% | |
| TCCCTCTATTCCATGCTTAT+TGG | - | chr3_2:20581895-20581914 | Msa0398660:CDS | 40.0% | |
| GACTGAAAAATTCCTCAGCT+AGG | + | chr3_2:20582031-20582050 | None:intergenic | 40.0% | |
| GGGTGGGAAAAGTGAAGAAA+AGG | + | chr3_2:20574250-20574269 | None:intergenic | 45.0% | |
| AAATGGGGGGTGAAGAGAAA+CGG | - | chr3_2:20574289-20574308 | Msa0398660:CDS | 45.0% | |
| GTATTGCAGGATGAAGGAGA+GGG | - | chr3_2:20574589-20574608 | Msa0398660:intron | 45.0% | |
| GAAGGAGAAGTTGAAGGACA+AGG | - | chr3_2:20574640-20574659 | Msa0398660:intron | 45.0% | |
| AGAAGTTGAAGGACAAGGAG+AGG | - | chr3_2:20574645-20574664 | Msa0398660:intron | 45.0% | |
| GAAGAAGAAGCAGAGAGTGA+AGG | - | chr3_2:20574670-20574689 | Msa0398660:intron | 45.0% | |
| AGAGTGGAAGAAGAGAGTGA+AGG | - | chr3_2:20574715-20574734 | Msa0398660:intron | 45.0% | |
| TGGAAGAAGAGAGTGAAGGT+AGG | - | chr3_2:20574719-20574738 | Msa0398660:intron | 45.0% | |
| GGAAGAAGAGAGTGAAGGTA+GGG | - | chr3_2:20574720-20574739 | Msa0398660:intron | 45.0% | |
| GAAGAAGAGAGTGAAGGTAG+GGG | - | chr3_2:20574721-20574740 | Msa0398660:intron | 45.0% | |
| AAGAAGAGAGTGAAGGTAGG+GGG | - | chr3_2:20574722-20574741 | Msa0398660:intron | 45.0% | |
| ! | GTGTCGTTACAAGTAAGCGT+AGG | - | chr3_2:20574782-20574801 | Msa0398660:CDS | 45.0% |
| CAATGAAATTGCTGGAGGAG+CGG | - | chr3_2:20575124-20575143 | Msa0398660:intron | 45.0% | |
| CTGCAAAGATGTTGCTATGC+AGG | - | chr3_2:20575333-20575352 | Msa0398660:intron | 45.0% | |
| GCAAAGATGTTGCTATGCAG+GGG | - | chr3_2:20575335-20575354 | Msa0398660:intron | 45.0% | |
| GGAATCTTGGGTTCAAACTC+AGG | + | chr3_2:20575361-20575380 | None:intergenic | 45.0% | |
| ACCCAGCTAAAACAACTGAG+TGG | + | chr3_2:20575510-20575529 | None:intergenic | 45.0% | |
| !!! | ACTCAGTTGTTTTAGCTGGG+TGG | - | chr3_2:20575509-20575528 | Msa0398660:intron | 45.0% |
| !!! | GTTGTTTTAGCTGGGTGGAT+TGG | - | chr3_2:20575514-20575533 | Msa0398660:intron | 45.0% |
| CATAAAGCGAGTCCTTGTTG+CGG | - | chr3_2:20575545-20575564 | Msa0398660:intron | 45.0% | |
| ATAAAGCGAGTCCTTGTTGC+GGG | - | chr3_2:20575546-20575565 | Msa0398660:intron | 45.0% | |
| CGGCCAATCAACAGAATTGT+AGG | - | chr3_2:20575605-20575624 | Msa0398660:intron | 45.0% | |
| GCGCCTACAATTCTGTTGAT+TGG | + | chr3_2:20575611-20575630 | None:intergenic | 45.0% | |
| AACACGTGCAAATTTCACCC+TGG | + | chr3_2:20575633-20575652 | None:intergenic | 45.0% | |
| !! | TTTGGTGATGTTGAGCTGCT+GGG | - | chr3_2:20575679-20575698 | Msa0398660:intron | 45.0% |
| ACTCGCACACAACACAAAGA+CGG | + | chr3_2:20575772-20575791 | None:intergenic | 45.0% | |
| ATGGTGAGAAGATGGAGCAT+AGG | - | chr3_2:20575862-20575881 | Msa0398660:intron | 45.0% | |
| TGGTGAGAAGATGGAGCATA+GGG | - | chr3_2:20575863-20575882 | Msa0398660:intron | 45.0% | |
| GGAATTGAAAACGGCGACTA+GGG | - | chr3_2:20575884-20575903 | Msa0398660:intron | 45.0% | |
| AAGAGTTCACTGAAGAGGAG+GGG | - | chr3_2:20575910-20575929 | Msa0398660:CDS | 45.0% | |
| AGGAGGGGAAGAGGAATATT+GGG | - | chr3_2:20575925-20575944 | Msa0398660:CDS | 45.0% | |
| GAAGAGGAATATTGGGCACT+TGG | - | chr3_2:20575932-20575951 | Msa0398660:CDS | 45.0% | |
| ATTTCTTGACCTGAACACGC+TGG | - | chr3_2:20576097-20576116 | Msa0398660:CDS | 45.0% | |
| ! | ATCTCGTGTATCGATGTGGT+TGG | + | chr3_2:20576136-20576155 | None:intergenic | 45.0% |
| ! | GTCAATCTCGTGTATCGATG+TGG | + | chr3_2:20576140-20576159 | None:intergenic | 45.0% |
| AGATTGACGACAAAGGACAG+AGG | - | chr3_2:20576152-20576171 | Msa0398660:intron | 45.0% | |
| GGACGAAAGTAGGTCTCAAA+AGG | + | chr3_2:20576306-20576325 | None:intergenic | 45.0% | |
| AAAGGACAGAGGACGAAAGT+AGG | + | chr3_2:20576163-20576182 | None:intergenic | 45.0% | |
| AGATTGACGACAAAGGACAG+AGG | + | chr3_2:20576152-20576171 | None:intergenic | 45.0% | |
| ! | ATCTTGTGTATCGGTGTAGC+TGG | - | chr3_2:20576343-20576362 | Msa0398660:intron | 45.0% |
| GGTGTAGCTGGAAATGAAAC+TGG | - | chr3_2:20576355-20576374 | Msa0398660:intron | 45.0% | |
| AGAAAGGAATTGGGCTGTCT+GGG | + | chr3_2:20576436-20576455 | None:intergenic | 45.0% | |
| AAGAAAGGAATTGGGCTGTC+TGG | + | chr3_2:20576437-20576456 | None:intergenic | 45.0% | |
| GAAGAGGAATATTGGGCACT+TGG | + | chr3_2:20575932-20575951 | None:intergenic | 45.0% | |
| GATTAGAGAGTTCGCTGAAG+AGG | + | chr3_2:20576572-20576591 | None:intergenic | 45.0% | |
| TGGTGAGAAGATGGAGCATA+GGG | + | chr3_2:20575863-20575882 | None:intergenic | 45.0% | |
| ATGGTGAGAAGATGGAGCAT+AGG | + | chr3_2:20575862-20575881 | None:intergenic | 45.0% | |
| ACATAGAGACGAAAGCAGAG+AGG | - | chr3_2:20576717-20576736 | Msa0398660:CDS | 45.0% | |
| !! | AGAGGAGCTTCTAGGATTCA+AGG | - | chr3_2:20576735-20576754 | Msa0398660:CDS | 45.0% |
| ATAATACTTGCGCTGTTGCC+GGG | + | chr3_2:20576967-20576986 | None:intergenic | 45.0% | |
| GATAATACTTGCGCTGTTGC+CGG | + | chr3_2:20576968-20576987 | None:intergenic | 45.0% | |
| ! | TCATGATTTGGATTCTGCCC+CGG | - | chr3_2:20577504-20577523 | Msa0398660:intron | 45.0% |
| CCGCAGTATATCTCTACAAC+AGG | + | chr3_2:20577701-20577720 | None:intergenic | 45.0% | |
| GTTGTAGAGATATACTGCGG+AGG | - | chr3_2:20577701-20577720 | Msa0398660:intron | 45.0% | |
| GCATCAGTATGAATCAGAGG+AGG | - | chr3_2:20577779-20577798 | Msa0398660:intron | 45.0% | |
| GAACATAGGTCTCCAACACA+AGG | + | chr3_2:20577902-20577921 | None:intergenic | 45.0% | |
| TCATCTGCCACACAAATGAG+AGG | + | chr3_2:20578262-20578281 | None:intergenic | 45.0% | |
| ! | AAACAAGAAGCGCATACGCT+TGG | - | chr3_2:20578379-20578398 | Msa0398660:CDS | 45.0% |
| CTTACAGATGTTGTGCCATC+AGG | + | chr3_2:20578440-20578459 | None:intergenic | 45.0% | |
| ! | GTAATGGTTGCCACTTACCA+TGG | + | chr3_2:20578534-20578553 | None:intergenic | 45.0% |
| ACCTAGTGGTCATTGGTCAA+AGG | + | chr3_2:20578596-20578615 | None:intergenic | 45.0% | |
| TTTGACCAATGACCACTAGG+TGG | - | chr3_2:20578595-20578614 | Msa0398660:intron | 45.0% | |
| TTGACCAATGACCACTAGGT+GGG | - | chr3_2:20578596-20578615 | Msa0398660:intron | 45.0% | |
| ATATATCCAACCCCACCTAG+TGG | + | chr3_2:20578610-20578629 | None:intergenic | 45.0% | |
| !! | CTAATGGTTTGGTCTTCCAG+CGG | - | chr3_2:20578746-20578765 | Msa0398660:CDS | 45.0% |
| !! | TAATGGTTTGGTCTTCCAGC+GGG | - | chr3_2:20578747-20578766 | Msa0398660:intron | 45.0% |
| GACCAAGCCTAACAGGAAAA+AGG | + | chr3_2:20578819-20578838 | None:intergenic | 45.0% | |
| CAAGTGCACATAGTCCATTG+AGG | + | chr3_2:20579359-20579378 | None:intergenic | 45.0% | |
| CAGGGAATTCTGCAATCACA+AGG | - | chr3_2:20579383-20579402 | Msa0398660:intron | 45.0% | |
| GAATTCGACGACAAGGAAGA+GGG | + | chr3_2:20579437-20579456 | None:intergenic | 45.0% | |
| AGAATTCGACGACAAGGAAG+AGG | + | chr3_2:20579438-20579457 | None:intergenic | 45.0% | |
| CCTTGTCGTCGAATTCTCAT+CGG | - | chr3_2:20579441-20579460 | Msa0398660:intron | 45.0% | |
| !! | TGTTGACTCAAGGCAAAGGA+AGG | - | chr3_2:20579478-20579497 | Msa0398660:intron | 45.0% |
| AGGCTGAAAGTCAGACTATC+AGG | - | chr3_2:20579643-20579662 | Msa0398660:intron | 45.0% | |
| GGCTGAAAGTCAGACTATCA+GGG | - | chr3_2:20579644-20579663 | Msa0398660:intron | 45.0% | |
| ! | CTTACGGGTAAGAAGTACGT+TGG | + | chr3_2:20579670-20579689 | None:intergenic | 45.0% |
| ! | ATTCACCTTTTCGCGCTTAC+GGG | + | chr3_2:20579685-20579704 | None:intergenic | 45.0% |
| ! | GATTCACCTTTTCGCGCTTA+CGG | + | chr3_2:20579686-20579705 | None:intergenic | 45.0% |
| GTAAGCGCGAAAAGGTGAAT+CGG | - | chr3_2:20579685-20579704 | Msa0398660:intron | 45.0% | |
| GCTTCCTCATCCTGAAGAAA+GGG | + | chr3_2:20579900-20579919 | None:intergenic | 45.0% | |
| TGCTTCCTCATCCTGAAGAA+AGG | + | chr3_2:20579901-20579920 | None:intergenic | 45.0% | |
| GACTCTTCTCTCTCATCATC+TGG | + | chr3_2:20580177-20580196 | None:intergenic | 45.0% | |
| AAGACGACGAGGAAGAAGAA+AGG | - | chr3_2:20580211-20580230 | Msa0398660:intron | 45.0% | |
| TGAGGCAGAATATGAGGATG+AGG | - | chr3_2:20580263-20580282 | Msa0398660:intron | 45.0% | |
| ! | GTTGGGAACTTTGGAAGTAG+GGG | - | chr3_2:20580639-20580658 | Msa0398660:intron | 45.0% |
| ! | TTGGGAACTTTGGAAGTAGG+GGG | - | chr3_2:20580640-20580659 | Msa0398660:intron | 45.0% |
| !! | GGTTGCGTTGGTTTCAGTTA+GGG | - | chr3_2:20580669-20580688 | Msa0398660:intron | 45.0% |
| ACATCTCTCAACCGTTGATG+AGG | - | chr3_2:20580902-20580921 | Msa0398660:intron | 45.0% | |
| TAGAGACCATGGCTGAAAGA+TGG | + | chr3_2:20581069-20581088 | None:intergenic | 45.0% | |
| ATCTTTCAGCCATGGTCTCT+AGG | - | chr3_2:20581068-20581087 | Msa0398660:intron | 45.0% | |
| CTAACTCTACCTAGAGACCA+TGG | + | chr3_2:20581080-20581099 | None:intergenic | 45.0% | |
| CATTAGTGCATTCCGTAGGT+GGG | + | chr3_2:20581280-20581299 | None:intergenic | 45.0% | |
| ACATTAGTGCATTCCGTAGG+TGG | + | chr3_2:20581281-20581300 | None:intergenic | 45.0% | |
| !! | AAGTAATAATAATAATTAAA+AGG | - | chr3_2:20576016-20576035 | Msa0398660:CDS | 5.0% |
| !!! | TGATTTTTTATTTTTTTTTT+TGG | - | chr3_2:20577440-20577459 | Msa0398660:intron | 5.0% |
| TACGCTCTCTCTGTTTGGGT+GGG | + | chr3_2:20574266-20574285 | None:intergenic | 50.0% | |
| TTACGCTCTCTCTGTTTGGG+TGG | + | chr3_2:20574267-20574286 | None:intergenic | 50.0% | |
| TCTCTTCGGAGATCAATCCG+AGG | - | chr3_2:20574329-20574348 | Msa0398660:CDS | 50.0% | |
| GGTATTGCAGGATGAAGGAG+AGG | - | chr3_2:20574588-20574607 | Msa0398660:intron | 50.0% | |
| GTAGGGCAAGAAGGTGAAGA+GGG | - | chr3_2:20574616-20574635 | Msa0398660:intron | 50.0% | |
| CAAGAAGGTGAAGAGGGTGA+AGG | - | chr3_2:20574622-20574641 | Msa0398660:intron | 50.0% | |
| GAGGGTGAAGGAGAAGTTGA+AGG | - | chr3_2:20574634-20574653 | Msa0398660:intron | 50.0% | |
| AAGCAGAGAGTGAAGGTGAG+AGG | - | chr3_2:20574677-20574696 | Msa0398660:intron | 50.0% | |
| AGCAGAGAGTGAAGGTGAGA+GGG | - | chr3_2:20574678-20574697 | Msa0398660:intron | 50.0% | |
| AGAAGAGAGTGAAGGTAGGG+GGG | - | chr3_2:20574723-20574742 | Msa0398660:intron | 50.0% | |
| CGTAGGGATGTCGTTGAAAG+TGG | - | chr3_2:20574799-20574818 | Msa0398660:CDS | 50.0% | |
| ACAGCACCAACCCAACAATG+TGG | + | chr3_2:20574921-20574940 | None:intergenic | 50.0% | |
| ! | GCGCCAACAATGATTAGCTC+GGG | + | chr3_2:20575093-20575112 | None:intergenic | 50.0% |
| ! | CGCGCCAACAATGATTAGCT+CGG | + | chr3_2:20575094-20575113 | None:intergenic | 50.0% |
| CGAGCTAATCATTGTTGGCG+CGG | - | chr3_2:20575092-20575111 | Msa0398660:intron | 50.0% | |
| AGTGTGCCTGCAACGTAAAG+TGG | - | chr3_2:20575207-20575226 | Msa0398660:intron | 50.0% | |
| TAAAGCGAGTCCTTGTTGCG+GGG | - | chr3_2:20575547-20575566 | Msa0398660:intron | 50.0% | |
| TCAACAGAATTGTAGGCGCC+AGG | - | chr3_2:20575612-20575631 | Msa0398660:intron | 50.0% | |
| CAACAGAATTGTAGGCGCCA+GGG | - | chr3_2:20575613-20575632 | Msa0398660:intron | 50.0% | |
| !! | CTTTGGTGATGTTGAGCTGC+TGG | - | chr3_2:20575678-20575697 | Msa0398660:intron | 50.0% |
| AGAGGAGCTTCTAGGTTGCA+AGG | + | chr3_2:20575743-20575762 | None:intergenic | 50.0% | |
| ACACAAAGACGGAAGCAGAG+AGG | + | chr3_2:20575761-20575780 | None:intergenic | 50.0% | |
| TGCTCCATCTTCTCACCATC+AGG | + | chr3_2:20576616-20576635 | None:intergenic | 50.0% | |
| GGGAATTGAAAACGGCGACT+AGG | - | chr3_2:20575883-20575902 | Msa0398660:intron | 50.0% | |
| GAGGAGGGGAAGAGGAATAT+TGG | - | chr3_2:20575924-20575943 | Msa0398660:CDS | 50.0% | |
| AAGAAAGGAATTGGGCCGTC+TGG | - | chr3_2:20576042-20576061 | Msa0398660:CDS | 50.0% | |
| AGAAAGGAATTGGGCCGTCT+GGG | - | chr3_2:20576043-20576062 | Msa0398660:CDS | 50.0% | |
| TGCCAATGATCTAGCCCAGA+CGG | + | chr3_2:20576060-20576079 | None:intergenic | 50.0% | |
| ! | GGCTGTCTGGGCTAGATTAT+TGG | + | chr3_2:20576424-20576443 | None:intergenic | 50.0% |
| GGGAATTGTAAACGGGGACT+AGG | + | chr3_2:20576594-20576613 | None:intergenic | 50.0% | |
| TGCTCCATCTTCTCACCATC+AGG | - | chr3_2:20576616-20576635 | Msa0398660:intron | 50.0% | |
| GAAAGCAGAGAGGAGCTTCT+AGG | - | chr3_2:20576727-20576746 | Msa0398660:CDS | 50.0% | |
| ! | TCTGGTGATGTTGAGCTGCT+GGG | + | chr3_2:20576793-20576812 | None:intergenic | 50.0% |
| ! | TTCTGGTGATGTTGAGCTGC+TGG | + | chr3_2:20576794-20576813 | None:intergenic | 50.0% |
| CGGCCAATCAGCAGAATTGT+GGG | + | chr3_2:20576868-20576887 | None:intergenic | 50.0% | |
| CTCGTAAATCTCCCGCAACA+AGG | - | chr3_2:20576913-20576932 | Msa0398660:intron | 50.0% | |
| TGTCTAAGTGCCAATCCACC+CGG | - | chr3_2:20576946-20576965 | Msa0398660:CDS | 50.0% | |
| GTAGAGATATACTGCGGAGG+AGG | - | chr3_2:20577704-20577723 | Msa0398660:intron | 50.0% | |
| AGATATACTGCGGAGGAGGA+AGG | - | chr3_2:20577708-20577727 | Msa0398660:intron | 50.0% | |
| GATATACTGCGGAGGAGGAA+GGG | - | chr3_2:20577709-20577728 | Msa0398660:intron | 50.0% | |
| TGAAAAGAGCTTGAGACCCG+AGG | - | chr3_2:20577737-20577756 | Msa0398660:intron | 50.0% | |
| AACACAAGGCAGACCTTTCC+TGG | + | chr3_2:20577888-20577907 | None:intergenic | 50.0% | |
| AGGAAAGGTCTGCCTTGTGT+TGG | - | chr3_2:20577887-20577906 | Msa0398660:CDS | 50.0% | |
| GCCTTTGACCAATGACCACT+AGG | - | chr3_2:20578592-20578611 | Msa0398660:intron | 50.0% | |
| TGACCAATGACCACTAGGTG+GGG | - | chr3_2:20578597-20578616 | Msa0398660:intron | 50.0% | |
| !! | GATGCCACTTTGCTCGATCA+TGG | - | chr3_2:20578639-20578658 | Msa0398660:CDS | 50.0% |
| TGGTCCATGATCGAGCAAAG+TGG | + | chr3_2:20578646-20578665 | None:intergenic | 50.0% | |
| ! | TTCCAGCGGGTCTTTTCTAC+AGG | - | chr3_2:20578760-20578779 | Msa0398660:intron | 50.0% |
| GCAATGCTCGCTTTGTAAGG+TGG | - | chr3_2:20579185-20579204 | Msa0398660:intron | 50.0% | |
| CGCTTTGTAAGGTGGTCTGA+TGG | - | chr3_2:20579193-20579212 | Msa0398660:intron | 50.0% | |
| CCGATGAGAATTCGACGACA+AGG | + | chr3_2:20579444-20579463 | None:intergenic | 50.0% | |
| TCTTACCCGTAAGCGCGAAA+AGG | - | chr3_2:20579677-20579696 | Msa0398660:intron | 50.0% | |
| TGCTCCCTTTCTTCAGGATG+AGG | - | chr3_2:20579893-20579912 | Msa0398660:intron | 50.0% | |
| TCGAACACAGCGTCACTATG+AGG | - | chr3_2:20579938-20579957 | Msa0398660:intron | 50.0% | |
| AACACAGCGTCACTATGAGG+AGG | - | chr3_2:20579941-20579960 | Msa0398660:intron | 50.0% | |
| CAGAAGTCCGAGCAGAGAAA+CGG | - | chr3_2:20579973-20579992 | Msa0398660:intron | 50.0% | |
| CATCATCTGGGTAACCCACT+TGG | + | chr3_2:20580164-20580183 | None:intergenic | 50.0% | |
| AAAGGCCTCGTTCTCGTATG+AGG | - | chr3_2:20580229-20580248 | Msa0398660:intron | 50.0% | |
| AAGGCCTCGTTCTCGTATGA+GGG | - | chr3_2:20580230-20580249 | Msa0398660:intron | 50.0% | |
| TCATCCCTCATACGAGAACG+AGG | + | chr3_2:20580237-20580256 | None:intergenic | 50.0% | |
| TTCGGATGAGGACGAAGATG+AGG | - | chr3_2:20580320-20580339 | Msa0398660:intron | 50.0% | |
| ! | TGGGAACTTTGGAAGTAGGG+GGG | - | chr3_2:20580641-20580660 | Msa0398660:intron | 50.0% |
| ACTGAAACCAACGCAACCCA+TGG | + | chr3_2:20580667-20580686 | None:intergenic | 50.0% | |
| !! | GGGTTGCGTTGGTTTCAGTT+AGG | - | chr3_2:20580668-20580687 | Msa0398660:intron | 50.0% |
| GAGTGACCATCTTTCAGCCA+TGG | - | chr3_2:20581060-20581079 | Msa0398660:intron | 50.0% | |
| ! | TCTGTTAGGTTGCCCACCTA+CGG | - | chr3_2:20581265-20581284 | Msa0398660:intron | 50.0% |
| ATTCCTCAGCTAGGTTCCCT+TGG | + | chr3_2:20582022-20582041 | None:intergenic | 50.0% | |
| CTTCGGAGATCAATCCGAGG+AGG | - | chr3_2:20574332-20574351 | Msa0398660:CDS | 55.0% | |
| TTGCAGGATGAAGGAGAGGG+AGG | - | chr3_2:20574592-20574611 | Msa0398660:intron | 55.0% | |
| TGCAGGATGAAGGAGAGGGA+GGG | - | chr3_2:20574593-20574612 | Msa0398660:intron | 55.0% | |
| ATGAAGGAGAGGGAGGGGTA+GGG | - | chr3_2:20574599-20574618 | Msa0398660:intron | 55.0% | |
| GGTAGGGCAAGAAGGTGAAG+AGG | - | chr3_2:20574615-20574634 | Msa0398660:intron | 55.0% | |
| AGAGAGTGAAGGTGAGAGGG+AGG | - | chr3_2:20574681-20574700 | Msa0398660:intron | 55.0% | |
| AGTGAAGGTGAGAGGGAGGT+TGG | - | chr3_2:20574685-20574704 | Msa0398660:intron | 55.0% | |
| !! | GGAGGTTGGTGATCAGAGAG+TGG | - | chr3_2:20574699-20574718 | Msa0398660:intron | 55.0% |
| CAGCAGCTAGAAGAAGCCTG+AGG | - | chr3_2:20574851-20574870 | Msa0398660:CDS | 55.0% | |
| AAAGCGAGTCCTTGTTGCGG+GGG | - | chr3_2:20575548-20575567 | Msa0398660:intron | 55.0% | |
| CTCATAAACCCCCCGCAACA+AGG | + | chr3_2:20575560-20575579 | None:intergenic | 55.0% | |
| ! | AGAACCGACTCTGACAGCTG+AGG | - | chr3_2:20575578-20575597 | Msa0398660:intron | 55.0% |
| CGATCCTCAGCTGTCAGAGT+CGG | + | chr3_2:20575585-20575604 | None:intergenic | 55.0% | |
| ACTCTGACAGCTGAGGATCG+CGG | - | chr3_2:20575585-20575604 | Msa0398660:intron | 55.0% | |
| GGAAGCAGAGAGGAGCTTCT+AGG | + | chr3_2:20575751-20575770 | None:intergenic | 55.0% | |
| TCACTGAAGAGGAGGGGAAG+AGG | - | chr3_2:20575916-20575935 | Msa0398660:CDS | 55.0% | |
| GAAACTGGACCAGCGTGTTC+AGG | + | chr3_2:20576109-20576128 | None:intergenic | 55.0% | |
| GCGCCCACAATTCTGCTGAT+TGG | - | chr3_2:20576862-20576881 | Msa0398660:intron | 55.0% | |
| GCGGCCAATCAGCAGAATTG+TGG | + | chr3_2:20576869-20576888 | None:intergenic | 55.0% | |
| TAAGCCACTTGGGCCACCAT+TGG | - | chr3_2:20577827-20577846 | Msa0398660:CDS | 55.0% | |
| AACTCCAATGGTGGCCCAAG+TGG | + | chr3_2:20577834-20577853 | None:intergenic | 55.0% | |
| TTTCCTGGAAGAGCTGGTGG+TGG | + | chr3_2:20577873-20577892 | None:intergenic | 55.0% | |
| ACCACCAGCTCTTCCAGGAA+AGG | - | chr3_2:20577872-20577891 | Msa0398660:CDS | 55.0% | |
| ACCTTTCCTGGAAGAGCTGG+TGG | + | chr3_2:20577876-20577895 | None:intergenic | 55.0% | |
| CAGACCTTTCCTGGAAGAGC+TGG | + | chr3_2:20577879-20577898 | None:intergenic | 55.0% | |
| CAACCCCACCTAGTGGTCAT+TGG | + | chr3_2:20578603-20578622 | None:intergenic | 55.0% | |
| CAATGACCACTAGGTGGGGT+TGG | - | chr3_2:20578601-20578620 | Msa0398660:intron | 55.0% | |
| CACCTGTAGAAAAGACCCGC+TGG | + | chr3_2:20578765-20578784 | None:intergenic | 55.0% | |
| ! | CGGGTCTTTTCTACAGGTGC+TGG | - | chr3_2:20578766-20578785 | Msa0398660:intron | 55.0% |
| AGTTGACGCCTCCTCTCAGT+TGG | + | chr3_2:20579720-20579739 | None:intergenic | 55.0% | |
| !! | AGGAGGCGTCAACTTTCTCC+TGG | - | chr3_2:20579726-20579745 | Msa0398660:intron | 55.0% |
| !! | GGAGGCGTCAACTTTCTCCT+GGG | - | chr3_2:20579727-20579746 | Msa0398660:intron | 55.0% |
| GGCTTACGAGGGATGCTCTT+TGG | + | chr3_2:20580108-20580127 | None:intergenic | 55.0% | |
| GGAGGAACGATGGCTTACGA+GGG | + | chr3_2:20580119-20580138 | None:intergenic | 55.0% | |
| TTTGCTGGTGGGAGGAACGA+TGG | + | chr3_2:20580129-20580148 | None:intergenic | 55.0% | |
| TCCCACCAGCAAAATCCTCC+CGG | - | chr3_2:20580136-20580155 | Msa0398660:intron | 55.0% | |
| AAAATCCTCCCGGCACCAAG+TGG | - | chr3_2:20580146-20580165 | Msa0398660:intron | 55.0% | |
| AAATCCTCCCGGCACCAAGT+GGG | - | chr3_2:20580147-20580166 | Msa0398660:intron | 55.0% | |
| TTTGGAAGTAGGGGGGCCAT+GGG | - | chr3_2:20580648-20580667 | Msa0398660:intron | 55.0% | |
| !! | GTCATTCGGCGATGGGTTGT+TGG | + | chr3_2:20581451-20581470 | None:intergenic | 55.0% |
| ACTCCAAGGGAACCTAGCTG+AGG | - | chr3_2:20582016-20582035 | Msa0398660:five_prime_UTR | 55.0% | |
| GCAGGATGAAGGAGAGGGAG+GGG | - | chr3_2:20574594-20574613 | Msa0398660:intron | 60.0% | |
| GATGAAGGAGAGGGAGGGGT+AGG | - | chr3_2:20574598-20574617 | Msa0398660:intron | 60.0% | |
| TGGAGGAGCGGCACACTATG+TGG | - | chr3_2:20575136-20575155 | Msa0398660:intron | 60.0% | |
| AAGCGAGTCCTTGTTGCGGG+GGG | - | chr3_2:20575549-20575568 | Msa0398660:intron | 60.0% | |
| TGATGTTGAGCTGCTGGGCG+TGG | - | chr3_2:20575684-20575703 | Msa0398660:intron | 60.0% | |
| ! | GGCCGTCTGGGCTAGATCAT+TGG | - | chr3_2:20576055-20576074 | Msa0398660:CDS | 60.0% |
| TGATGTTGAGCTGCTGGGCC+TGG | + | chr3_2:20576788-20576807 | None:intergenic | 60.0% | |
| CAGCAGAATTGTGGGCGCCA+GGG | + | chr3_2:20576860-20576879 | None:intergenic | 60.0% | |
| TCAGCAGAATTGTGGGCGCC+AGG | + | chr3_2:20576861-20576880 | None:intergenic | 60.0% | |
| ! | TGCTGATTGGCCGCGATCCT+CGG | - | chr3_2:20576875-20576894 | Msa0398660:intron | 60.0% |
| ACTCTGACAGCCGAGGATCG+CGG | + | chr3_2:20576888-20576907 | None:intergenic | 60.0% | |
| CGATCCTCGGCTGTCAGAGT+CGG | - | chr3_2:20576888-20576907 | Msa0398660:intron | 60.0% | |
| ! | AGAACCGACTCTGACAGCCG+AGG | + | chr3_2:20576895-20576914 | None:intergenic | 60.0% |
| ATACTTGCGCTGTTGCCGGG+TGG | + | chr3_2:20576964-20576983 | None:intergenic | 60.0% | |
| TATGGGGTACGCAGCTCAGC+AGG | - | chr3_2:20577570-20577589 | Msa0398660:intron | 60.0% | |
| !! | AGAGCTGGTGGTGGACGTAG+TGG | + | chr3_2:20577864-20577883 | None:intergenic | 60.0% |
| GGGAGGAACGATGGCTTACG+AGG | + | chr3_2:20580120-20580139 | None:intergenic | 60.0% | |
| ! | GGGAGGATTTTGCTGGTGGG+AGG | + | chr3_2:20580137-20580156 | None:intergenic | 60.0% |
| ! | GCCGGGAGGATTTTGCTGGT+GGG | + | chr3_2:20580140-20580159 | None:intergenic | 60.0% |
| ! | TGCCGGGAGGATTTTGCTGG+TGG | + | chr3_2:20580141-20580160 | None:intergenic | 60.0% |
| !! | TGGTGCCGGGAGGATTTTGC+TGG | + | chr3_2:20580144-20580163 | None:intergenic | 60.0% |
| !! | TGGGTAACCCACTTGGTGCC+GGG | + | chr3_2:20580157-20580176 | None:intergenic | 60.0% |
| !! | CTGGGTAACCCACTTGGTGC+CGG | + | chr3_2:20580158-20580177 | None:intergenic | 60.0% |
| ! | CTTTGGAAGTAGGGGGGCCA+TGG | - | chr3_2:20580647-20580666 | Msa0398660:intron | 60.0% |
| GAGGGAGGGGTAGGGCAAGA+AGG | - | chr3_2:20574607-20574626 | Msa0398660:intron | 65.0% | |
| CGCAGAGAGCAGCAGTGTCC+AGG | - | chr3_2:20576767-20576786 | Msa0398660:CDS | 65.0% | |
| TGCGCTGTTGCCGGGTGGAT+TGG | + | chr3_2:20576959-20576978 | None:intergenic | 65.0% | |
| CGTCCACCACCAGCTCTTCC+AGG | - | chr3_2:20577867-20577886 | Msa0398660:CDS | 65.0% | |
| !! | GTAACCCACTTGGTGCCGGG+AGG | + | chr3_2:20580154-20580173 | None:intergenic | 65.0% |
| ! | AGGGGGGCCATGGGTTGCGT+TGG | - | chr3_2:20580657-20580676 | Msa0398660:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 20574134 | 20582105 | 20574134 | ID=Msa0398660;Name=Msa0398660 |
| chr3_2 | mRNA | 20574134 | 20582105 | 20574134 | ID=Msa0398660-mRNA-1;Parent=Msa0398660;Name=Msa0398660-mRNA-1;_AED=0.08;_eAED=0.08;_QI=157|0.90|0.91|1|1|1|12|139|651 |
| chr3_2 | exon | 20574134 | 20574421 | 20574134 | ID=Msa0398660-mRNA-1:exon:4472;Parent=Msa0398660-mRNA-1 |
| chr3_2 | exon | 20574755 | 20574878 | 20574755 | ID=Msa0398660-mRNA-1:exon:4471;Parent=Msa0398660-mRNA-1 |
| chr3_2 | exon | 20575898 | 20576143 | 20575898 | ID=Msa0398660-mRNA-1:exon:4470;Parent=Msa0398660-mRNA-1 |
| chr3_2 | exon | 20576226 | 20576330 | 20576226 | ID=Msa0398660-mRNA-1:exon:4469;Parent=Msa0398660-mRNA-1 |
| chr3_2 | exon | 20576466 | 20576594 | 20576466 | ID=Msa0398660-mRNA-1:exon:4468;Parent=Msa0398660-mRNA-1 |
| chr3_2 | exon | 20576674 | 20576853 | 20576674 | ID=Msa0398660-mRNA-1:exon:4467;Parent=Msa0398660-mRNA-1 |
| chr3_2 | exon | 20576930 | 20577061 | 20576930 | ID=Msa0398660-mRNA-1:exon:4466;Parent=Msa0398660-mRNA-1 |
| chr3_2 | exon | 20577785 | 20577961 | 20577785 | ID=Msa0398660-mRNA-1:exon:4465;Parent=Msa0398660-mRNA-1 |
| chr3_2 | exon | 20578346 | 20578531 | 20578346 | ID=Msa0398660-mRNA-1:exon:4464;Parent=Msa0398660-mRNA-1 |
| chr3_2 | exon | 20578627 | 20578765 | 20578627 | ID=Msa0398660-mRNA-1:exon:4463;Parent=Msa0398660-mRNA-1 |
| chr3_2 | exon | 20581367 | 20581641 | 20581367 | ID=Msa0398660-mRNA-1:exon:4462;Parent=Msa0398660-mRNA-1 |
| chr3_2 | exon | 20581835 | 20582105 | 20581835 | ID=Msa0398660-mRNA-1:exon:4461;Parent=Msa0398660-mRNA-1 |
| chr3_2 | five_prime_UTR | 20581949 | 20582105 | 20581949 | ID=Msa0398660-mRNA-1:five_prime_utr;Parent=Msa0398660-mRNA-1 |
| chr3_2 | CDS | 20581835 | 20581948 | 20581835 | ID=Msa0398660-mRNA-1:cds;Parent=Msa0398660-mRNA-1 |
| chr3_2 | CDS | 20581367 | 20581641 | 20581367 | ID=Msa0398660-mRNA-1:cds;Parent=Msa0398660-mRNA-1 |
| chr3_2 | CDS | 20578627 | 20578765 | 20578627 | ID=Msa0398660-mRNA-1:cds;Parent=Msa0398660-mRNA-1 |
| chr3_2 | CDS | 20578346 | 20578531 | 20578346 | ID=Msa0398660-mRNA-1:cds;Parent=Msa0398660-mRNA-1 |
| chr3_2 | CDS | 20577785 | 20577961 | 20577785 | ID=Msa0398660-mRNA-1:cds;Parent=Msa0398660-mRNA-1 |
| chr3_2 | CDS | 20576930 | 20577061 | 20576930 | ID=Msa0398660-mRNA-1:cds;Parent=Msa0398660-mRNA-1 |
| chr3_2 | CDS | 20576674 | 20576853 | 20576674 | ID=Msa0398660-mRNA-1:cds;Parent=Msa0398660-mRNA-1 |
| chr3_2 | CDS | 20576466 | 20576594 | 20576466 | ID=Msa0398660-mRNA-1:cds;Parent=Msa0398660-mRNA-1 |
| chr3_2 | CDS | 20576226 | 20576330 | 20576226 | ID=Msa0398660-mRNA-1:cds;Parent=Msa0398660-mRNA-1 |
| chr3_2 | CDS | 20575898 | 20576143 | 20575898 | ID=Msa0398660-mRNA-1:cds;Parent=Msa0398660-mRNA-1 |
| chr3_2 | CDS | 20574755 | 20574878 | 20574755 | ID=Msa0398660-mRNA-1:cds;Parent=Msa0398660-mRNA-1 |
| chr3_2 | CDS | 20574273 | 20574421 | 20574273 | ID=Msa0398660-mRNA-1:cds;Parent=Msa0398660-mRNA-1 |
| chr3_2 | three_prime_UTR | 20574134 | 20574272 | 20574134 | ID=Msa0398660-mRNA-1:three_prime_utr;Parent=Msa0398660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
