Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0816730 | XP_003616416.1 | 91.615 | 644 | 19 | 2 | 1 | 637 | 1 | 616 | 0.0 | 1141 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0816730 | sp|Q9FFY9|TRP4_ARATH | 42.836 | 670 | 297 | 15 | 1 | 627 | 1 | 627 | 1.66e-144 | 437 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0816730 | G7KBS1 | 91.615 | 644 | 19 | 2 | 1 | 637 | 1 | 616 | 0.0 | 1141 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015930 | Msa0816730 | 0.816197 | 6.261070e-52 | -8.615850e-47 |
| Msa0018070 | Msa0816730 | 0.803159 | 3.981075e-49 | -8.615850e-47 |
| Msa0020390 | Msa0816730 | 0.854435 | 1.233537e-61 | -8.615850e-47 |
| Msa0026710 | Msa0816730 | 0.810399 | 1.174926e-50 | -8.615850e-47 |
| Msa0027260 | Msa0816730 | 0.805216 | 1.485661e-49 | -8.615850e-47 |
| Msa0037540 | Msa0816730 | -0.812107 | 5.007719e-51 | -8.615850e-47 |
| Msa0037590 | Msa0816730 | -0.808201 | 3.479089e-50 | -8.615850e-47 |
| Msa0038870 | Msa0816730 | 0.807981 | 3.876106e-50 | -8.615850e-47 |
| Msa0055180 | Msa0816730 | 0.801526 | 8.637897e-49 | -8.615850e-47 |
| Msa0058300 | Msa0816730 | 0.806092 | 9.727262e-50 | -8.615850e-47 |
| Msa0059040 | Msa0816730 | 0.800397 | 1.468854e-48 | -8.615850e-47 |
| Msa0059110 | Msa0816730 | 0.806885 | 6.619214e-50 | -8.615850e-47 |
| Msa0065950 | Msa0816730 | 0.802831 | 4.655331e-49 | -8.615850e-47 |
| Msa0075500 | Msa0816730 | 0.803980 | 2.689954e-49 | -8.615850e-47 |
| Msa0090520 | Msa0816730 | 0.816867 | 4.431300e-52 | -8.615850e-47 |
| Msa0090570 | Msa0816730 | 0.816947 | 4.252726e-52 | -8.615850e-47 |
| Msa0100740 | Msa0816730 | 0.813728 | 2.210347e-51 | -8.615850e-47 |
| Msa0105620 | Msa0816730 | 0.800600 | 1.335932e-48 | -8.615850e-47 |
| Msa0115190 | Msa0816730 | 0.817239 | 3.655945e-52 | -8.615850e-47 |
| Msa0115390 | Msa0816730 | 0.800032 | 1.742965e-48 | -8.615850e-47 |
| Msa0118540 | Msa0816730 | 0.820032 | 8.495669e-53 | -8.615850e-47 |
| Msa0604290 | Msa0816730 | 0.815488 | 9.009352e-52 | -8.615850e-47 |
| Msa0610430 | Msa0816730 | 0.803801 | 2.931456e-49 | -8.615850e-47 |
| Msa0620620 | Msa0816730 | 0.808284 | 3.340030e-50 | -8.615850e-47 |
| Msa0631350 | Msa0816730 | 0.813834 | 2.093785e-51 | -8.615850e-47 |
| Msa0642970 | Msa0816730 | 0.815726 | 7.974064e-52 | -8.615850e-47 |
| Msa0643570 | Msa0816730 | 0.803613 | 3.206361e-49 | -8.615850e-47 |
| Msa0672550 | Msa0816730 | 0.840910 | 6.539222e-58 | -8.615850e-47 |
| Msa0689260 | Msa0816730 | 0.804176 | 2.449534e-49 | -8.615850e-47 |
| Msa0692830 | Msa0816730 | 0.828631 | 8.077269e-55 | -8.615850e-47 |
| Msa0692950 | Msa0816730 | 0.817482 | 3.223623e-52 | -8.615850e-47 |
| Msa0698540 | Msa0816730 | 0.814667 | 1.370851e-51 | -8.615850e-47 |
| Msa0715700 | Msa0816730 | 0.807255 | 5.526239e-50 | -8.615850e-47 |
| Msa0719420 | Msa0816730 | 0.811255 | 7.672404e-51 | -8.615850e-47 |
| Msa0737600 | Msa0816730 | 0.912959 | 1.070508e-83 | -8.615850e-47 |
| Msa0746210 | Msa0816730 | 0.801345 | 9.409448e-49 | -8.615850e-47 |
| Msa0751010 | Msa0816730 | 0.812841 | 3.460788e-51 | -8.615850e-47 |
| Msa0779360 | Msa0816730 | 0.847535 | 1.087437e-59 | -8.615850e-47 |
| Msa0784860 | Msa0816730 | 0.810362 | 1.197139e-50 | -8.615850e-47 |
| Msa0789680 | Msa0816730 | 0.810824 | 9.511768e-51 | -8.615850e-47 |
| Msa0800370 | Msa0816730 | 0.844533 | 7.129570e-59 | -8.615850e-47 |
| Msa0802410 | Msa0816730 | 0.807989 | 3.859856e-50 | -8.615850e-47 |
| Msa0816730 | Msa0818750 | 0.813420 | 2.583331e-51 | -8.615850e-47 |
| Msa0816730 | Msa0822500 | 0.808438 | 3.097287e-50 | -8.615850e-47 |
| Msa0816730 | Msa0826760 | 0.821650 | 3.607805e-53 | -8.615850e-47 |
| Msa0816730 | Msa0856960 | 0.879012 | 1.763718e-69 | -8.615850e-47 |
| Msa0816730 | Msa0887250 | 0.813540 | 2.430994e-51 | -8.615850e-47 |
| Msa0816730 | Msa0900110 | 0.803310 | 3.705629e-49 | -8.615850e-47 |
| Msa0816730 | Msa0944870 | 0.803425 | 3.507305e-49 | -8.615850e-47 |
| Msa0816730 | Msa0969370 | 0.801177 | 1.018235e-48 | -8.615850e-47 |
| Msa0816730 | Msa0969810 | 0.800995 | 1.109522e-48 | -8.615850e-47 |
| Msa0816730 | Msa0987370 | 0.810114 | 1.353756e-50 | -8.615850e-47 |
| Msa0816730 | Msa0997970 | 0.801118 | 1.046797e-48 | -8.615850e-47 |
| Msa0816730 | Msa0999970 | 0.810328 | 1.217514e-50 | -8.615850e-47 |
| Msa0816730 | Msa1009820 | 0.809220 | 2.107215e-50 | -8.615850e-47 |
| Msa0816730 | Msa1023180 | 0.810138 | 1.337777e-50 | -8.615850e-47 |
| Msa0816730 | Msa1029070 | 0.801094 | 1.058885e-48 | -8.615850e-47 |
| Msa0816730 | Msa1030620 | 0.834168 | 3.503070e-56 | -8.615850e-47 |
| Msa0816730 | Msa1037420 | 0.859829 | 3.155260e-63 | -8.615850e-47 |
| Msa0816730 | Msa1043050 | 0.810418 | 1.164328e-50 | -8.615850e-47 |
| Msa0816730 | Msa1045050 | 0.804489 | 2.108310e-49 | -8.615850e-47 |
| Msa0816730 | Msa1051200 | 0.821168 | 4.660002e-53 | -8.615850e-47 |
| Msa0816730 | Msa1072900 | 0.802343 | 5.867706e-49 | -8.615850e-47 |
| Msa0816730 | Msa1080290 | 0.837399 | 5.318592e-57 | -8.615850e-47 |
| Msa0816730 | Msa1089320 | 0.821959 | 3.058799e-53 | -8.615850e-47 |
| Msa0816730 | Msa1089460 | 0.801727 | 7.856088e-49 | -8.615850e-47 |
| Msa0816730 | Msa1091940 | 0.812429 | 4.259747e-51 | -8.615850e-47 |
| Msa0816730 | Msa1106700 | 0.810546 | 1.092277e-50 | -8.615850e-47 |
| Msa0816730 | Msa1122820 | 0.800012 | 1.759479e-48 | -8.615850e-47 |
| Msa0816730 | Msa1123810 | 0.840753 | 7.191342e-58 | -8.615850e-47 |
| Msa0816730 | Msa1126830 | 0.808207 | 3.468357e-50 | -8.615850e-47 |
| Msa0816730 | Msa1129550 | 0.809788 | 1.591343e-50 | -8.615850e-47 |
| Msa0816730 | Msa1133230 | 0.840875 | 6.680017e-58 | -8.615850e-47 |
| Msa0816730 | Msa1133250 | 0.850560 | 1.568812e-60 | -8.615850e-47 |
| Msa0816730 | Msa1137700 | 0.834774 | 2.467347e-56 | -8.615850e-47 |
| Msa0816730 | Msa1150710 | 0.820107 | 8.169363e-53 | -8.615850e-47 |
| Msa0816730 | Msa1156160 | 0.808919 | 2.444471e-50 | -8.615850e-47 |
| Msa0816730 | Msa1160590 | 0.805905 | 1.065208e-49 | -8.615850e-47 |
| Msa0816730 | Msa1165780 | 0.819588 | 1.073500e-52 | -8.615850e-47 |
| Msa0816730 | Msa1180500 | 0.860802 | 1.601725e-63 | -8.615850e-47 |
| Msa0816730 | Msa1181250 | 0.806229 | 9.105264e-50 | -8.615850e-47 |
| Msa0816730 | Msa1204630 | 0.804192 | 2.430404e-49 | -8.615850e-47 |
| Msa0816730 | Msa1206270 | 0.827624 | 1.411317e-54 | -8.615850e-47 |
| Msa0816730 | Msa1206290 | 0.817510 | 3.176975e-52 | -8.615850e-47 |
| Msa0816730 | Msa1211230 | -0.824879 | 6.354817e-54 | -8.615850e-47 |
| Msa0816730 | Msa1211420 | -0.828182 | 1.036134e-54 | -8.615850e-47 |
| Msa0816730 | Msa1224810 | 0.825796 | 3.856136e-54 | -8.615850e-47 |
| Msa0816730 | Msa1231840 | 0.857805 | 1.270930e-62 | -8.615850e-47 |
| Msa0816730 | Msa1232740 | 0.801853 | 7.401800e-49 | -8.615850e-47 |
| Msa0816730 | Msa1254730 | 0.843147 | 1.674915e-58 | -8.615850e-47 |
| Msa0816730 | Msa1256810 | 0.823885 | 1.088451e-53 | -8.615850e-47 |
| Msa0816730 | Msa1262720 | 0.813405 | 2.602816e-51 | -8.615850e-47 |
| Msa0816730 | Msa1265590 | 0.824116 | 9.610242e-54 | -8.615850e-47 |
| Msa0816730 | Msa1274560 | 0.882636 | 8.820553e-71 | -8.615850e-47 |
| Msa0816730 | Msa1275110 | 0.807165 | 5.775906e-50 | -8.615850e-47 |
| Msa0816730 | Msa1287460 | 0.808708 | 2.712535e-50 | -8.615850e-47 |
| Msa0816730 | Msa1293520 | 0.809687 | 1.672734e-50 | -8.615850e-47 |
| Msa0816730 | Msa1294820 | 0.826899 | 2.105998e-54 | -8.615850e-47 |
| Msa0816730 | Msa1306560 | 0.800152 | 1.648021e-48 | -8.615850e-47 |
| Msa0816730 | Msa1307600 | 0.800806 | 1.212744e-48 | -8.615850e-47 |
| Msa0816730 | Msa1312520 | 0.865951 | 4.067735e-65 | -8.615850e-47 |
| Msa0816730 | Msa1313320 | 0.800387 | 1.475829e-48 | -8.615850e-47 |
| Msa0816730 | Msa1316360 | 0.808516 | 2.980691e-50 | -8.615850e-47 |
| Msa0816730 | Msa1331050 | -0.824155 | 9.409496e-54 | -8.615850e-47 |
| Msa0816730 | Msa1332590 | 0.805561 | 1.257721e-49 | -8.615850e-47 |
| Msa0816730 | Msa1336560 | 0.839820 | 1.260730e-57 | -8.615850e-47 |
| Msa0816730 | Msa1342410 | 0.837242 | 5.834887e-57 | -8.615850e-47 |
| Msa0816730 | Msa1347830 | 0.811288 | 7.546000e-51 | -8.615850e-47 |
| Msa0816730 | Msa1351540 | 0.837772 | 4.266965e-57 | -8.615850e-47 |
| Msa0816730 | Msa1358250 | 0.803557 | 3.292735e-49 | -8.615850e-47 |
| Msa0816730 | Msa1364210 | 0.822993 | 1.759035e-53 | -8.615850e-47 |
| Msa0816730 | Msa1385770 | 0.831543 | 1.573142e-55 | -8.615850e-47 |
| Msa0816730 | Msa1392780 | 0.802050 | 6.742724e-49 | -8.615850e-47 |
| Msa0816730 | Msa1406070 | 0.800643 | 1.308955e-48 | -8.615850e-47 |
| Msa0816730 | Msa1409240 | 0.828627 | 8.093308e-55 | -8.615850e-47 |
| Msa0816730 | Msa1419870 | 0.818831 | 1.596607e-52 | -8.615850e-47 |
| Msa0816730 | Msa1434140 | 0.824695 | 7.021989e-54 | -8.615850e-47 |
| Msa0816730 | Msa1448630 | 0.801013 | 1.099833e-48 | -8.615850e-47 |
| Msa0816730 | Msa1454680 | 0.812792 | 3.547574e-51 | -8.615850e-47 |
| Msa0816730 | Msa1458090 | 0.810458 | 1.141233e-50 | -8.615850e-47 |
| Msa0127020 | Msa0816730 | 0.813475 | 2.511507e-51 | -8.615850e-47 |
| Msa0129190 | Msa0816730 | -0.814459 | 1.523982e-51 | -8.615850e-47 |
| Msa0137990 | Msa0816730 | 0.814753 | 1.312417e-51 | -8.615850e-47 |
| Msa0145730 | Msa0816730 | 0.811989 | 5.311945e-51 | -8.615850e-47 |
| Msa0150820 | Msa0816730 | 0.809273 | 2.052496e-50 | -8.615850e-47 |
| Msa0156370 | Msa0816730 | 0.822496 | 2.296424e-53 | -8.615850e-47 |
| Msa0159170 | Msa0816730 | 0.801151 | 1.030915e-48 | -8.615850e-47 |
| Msa0159420 | Msa0816730 | 0.817604 | 3.025167e-52 | -8.615850e-47 |
| Msa0167980 | Msa0816730 | 0.820501 | 6.634686e-53 | -8.615850e-47 |
| Msa0169280 | Msa0816730 | 0.815125 | 1.084878e-51 | -8.615850e-47 |
| Msa0172970 | Msa0816730 | 0.803162 | 3.976035e-49 | -8.615850e-47 |
| Msa0183850 | Msa0816730 | 0.827099 | 1.885888e-54 | -8.615850e-47 |
| Msa0183900 | Msa0816730 | 0.817230 | 3.673114e-52 | -8.615850e-47 |
| Msa0187120 | Msa0816730 | 0.809296 | 2.029382e-50 | -8.615850e-47 |
| Msa0188350 | Msa0816730 | 0.813825 | 2.103991e-51 | -8.615850e-47 |
| Msa0189520 | Msa0816730 | 0.805364 | 1.383637e-49 | -8.615850e-47 |
| Msa0199880 | Msa0816730 | 0.811975 | 5.350126e-51 | -8.615850e-47 |
| Msa0202410 | Msa0816730 | 0.822311 | 2.535554e-53 | -8.615850e-47 |
| Msa0212930 | Msa0816730 | 0.811769 | 5.931546e-51 | -8.615850e-47 |
| Msa0233370 | Msa0816730 | 0.838603 | 2.606918e-57 | -8.615850e-47 |
| Msa0372340 | Msa0816730 | 0.823212 | 1.564191e-53 | -8.615850e-47 |
| Msa0382370 | Msa0816730 | 0.807277 | 5.468870e-50 | -8.615850e-47 |
| Msa0385490 | Msa0816730 | 0.841612 | 4.275799e-58 | -8.615850e-47 |
| Msa0385500 | Msa0816730 | 0.803001 | 4.293584e-49 | -8.615850e-47 |
| Msa0387750 | Msa0816730 | 0.804705 | 1.900531e-49 | -8.615850e-47 |
| Msa0388700 | Msa0816730 | 0.817214 | 3.702964e-52 | -8.615850e-47 |
| Msa0398660 | Msa0816730 | 0.801249 | 9.843711e-49 | -8.615850e-47 |
| Msa0402790 | Msa0816730 | 0.819463 | 1.146165e-52 | -8.615850e-47 |
| Msa0445330 | Msa0816730 | 0.835815 | 1.347301e-56 | -8.615850e-47 |
| Msa0450480 | Msa0816730 | 0.816782 | 4.631218e-52 | -8.615850e-47 |
| Msa0453350 | Msa0816730 | 0.806952 | 6.407531e-50 | -8.615850e-47 |
| Msa0455760 | Msa0816730 | 0.801838 | 7.452921e-49 | -8.615850e-47 |
| Msa0241470 | Msa0816730 | 0.810140 | 1.336655e-50 | -8.615850e-47 |
| Msa0242410 | Msa0816730 | 0.811398 | 7.140708e-51 | -8.615850e-47 |
| Msa0253200 | Msa0816730 | 0.814061 | 1.865933e-51 | -8.615850e-47 |
| Msa0256840 | Msa0816730 | 0.823423 | 1.396419e-53 | -8.615850e-47 |
| Msa0257490 | Msa0816730 | 0.827043 | 1.945701e-54 | -8.615850e-47 |
| Msa0257500 | Msa0816730 | 0.816641 | 4.981074e-52 | -8.615850e-47 |
| Msa0259210 | Msa0816730 | 0.807774 | 4.288286e-50 | -8.615850e-47 |
| Msa0261550 | Msa0816730 | 0.813391 | 2.620655e-51 | -8.615850e-47 |
| Msa0271360 | Msa0816730 | 0.819415 | 1.175595e-52 | -8.615850e-47 |
| Msa0274040 | Msa0816730 | -0.803841 | 2.875700e-49 | -8.615850e-47 |
| Msa0278580 | Msa0816730 | 0.802982 | 4.332131e-49 | -8.615850e-47 |
| Msa0279220 | Msa0816730 | 0.810427 | 1.159199e-50 | -8.615850e-47 |
| Msa0281530 | Msa0816730 | 0.828711 | 7.721958e-55 | -8.615850e-47 |
| Msa0292030 | Msa0816730 | 0.817938 | 2.543479e-52 | -8.615850e-47 |
| Msa0295540 | Msa0816730 | 0.808885 | 2.485766e-50 | -8.615850e-47 |
| Msa0296790 | Msa0816730 | 0.801624 | 8.246425e-49 | -8.615850e-47 |
| Msa0296820 | Msa0816730 | 0.841608 | 4.285617e-58 | -8.615850e-47 |
| Msa0306710 | Msa0816730 | 0.811851 | 5.692196e-51 | -8.615850e-47 |
| Msa0309880 | Msa0816730 | 0.819423 | 1.170485e-52 | -8.615850e-47 |
| Msa0311720 | Msa0816730 | 0.801453 | 8.940840e-49 | -8.615850e-47 |
| Msa0320590 | Msa0816730 | 0.829156 | 6.026557e-55 | -8.615850e-47 |
| Msa0322240 | Msa0816730 | 0.803471 | 3.432232e-49 | -8.615850e-47 |
| Msa0330310 | Msa0816730 | 0.829791 | 4.224925e-55 | -8.615850e-47 |
| Msa0492890 | Msa0816730 | 0.820609 | 6.265447e-53 | -8.615850e-47 |
| Msa0493410 | Msa0816730 | 0.809386 | 1.941633e-50 | -8.615850e-47 |
| Msa0506400 | Msa0816730 | 0.802439 | 5.607012e-49 | -8.615850e-47 |
| Msa0510840 | Msa0816730 | 0.800076 | 1.707373e-48 | -8.615850e-47 |
| Msa0534900 | Msa0816730 | 0.821750 | 3.419225e-53 | -8.615850e-47 |
| Msa0542290 | Msa0816730 | 0.820375 | 7.089931e-53 | -8.615850e-47 |
| Msa0545080 | Msa0816730 | 0.824704 | 6.986925e-54 | -8.615850e-47 |
| Msa0556060 | Msa0816730 | 0.840825 | 6.886366e-58 | -8.615850e-47 |
| Msa0557480 | Msa0816730 | 0.811715 | 6.095724e-51 | -8.615850e-47 |
| Msa0581110 | Msa0816730 | 0.807090 | 5.989303e-50 | -8.615850e-47 |
| Msa0588260 | Msa0816730 | 0.814692 | 1.353355e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0816730 | MtrunA17_Chr5g0435351 | 91.615 | 644 | 19 | 2 | 1 | 637 | 1 | 616 | 0.0 | 1141 |
| Msa0816730 | MtrunA17_Chr3g0111941 | 51.662 | 662 | 248 | 15 | 1 | 627 | 1 | 625 | 0.0 | 575 |
| Msa0816730 | MtrunA17_Chr2g0328331 | 42.041 | 490 | 219 | 8 | 157 | 616 | 253 | 707 | 7.45e-105 | 333 |
| Msa0816730 | MtrunA17_Chr7g0238741 | 35.417 | 672 | 324 | 19 | 1 | 625 | 1 | 609 | 2.22e-99 | 316 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0816730 | AT5G13820.2 | 42.836 | 670 | 297 | 15 | 1 | 627 | 1 | 627 | 1.69e-145 | 437 |
| Msa0816730 | AT5G13820.1 | 42.836 | 670 | 297 | 15 | 1 | 627 | 1 | 627 | 1.69e-145 | 437 |
| Msa0816730 | AT3G12560.1 | 41.026 | 663 | 289 | 14 | 1 | 625 | 1 | 599 | 2.83e-134 | 407 |
| Msa0816730 | AT3G12560.2 | 41.026 | 663 | 289 | 14 | 1 | 625 | 1 | 599 | 2.83e-134 | 407 |
| Msa0816730 | AT3G46590.1 | 37.821 | 661 | 267 | 24 | 1 | 633 | 1 | 545 | 1.00e-96 | 308 |
| Msa0816730 | AT3G46590.2 | 37.613 | 662 | 268 | 25 | 1 | 633 | 1 | 546 | 6.34e-96 | 305 |
| Msa0816730 | AT3G46590.3 | 37.311 | 662 | 264 | 24 | 1 | 633 | 1 | 540 | 3.03e-95 | 303 |
| Msa0816730 | AT1G07540.1 | 43.596 | 445 | 190 | 11 | 189 | 624 | 225 | 617 | 1.88e-91 | 296 |
| Msa0816730 | AT3G46590.5 | 37.903 | 620 | 241 | 24 | 42 | 633 | 2 | 505 | 1.47e-89 | 288 |
| Msa0816730 | AT5G59430.3 | 47.634 | 317 | 136 | 8 | 317 | 624 | 261 | 556 | 4.84e-76 | 253 |
| Msa0816730 | AT5G59430.2 | 49.147 | 293 | 123 | 6 | 330 | 616 | 277 | 549 | 5.56e-75 | 251 |
| Msa0816730 | AT5G59430.1 | 49.147 | 293 | 123 | 6 | 330 | 616 | 277 | 549 | 5.56e-75 | 251 |
| Msa0816730 | AT5G59430.5 | 49.147 | 293 | 123 | 6 | 330 | 616 | 277 | 549 | 5.56e-75 | 251 |
| Msa0816730 | AT5G59430.4 | 49.147 | 293 | 123 | 6 | 330 | 616 | 276 | 548 | 5.85e-75 | 251 |
| Msa0816730 | AT3G53790.1 | 42.857 | 336 | 128 | 7 | 287 | 616 | 119 | 396 | 1.60e-66 | 223 |
| Msa0816730 | AT3G46590.4 | 31.991 | 447 | 203 | 18 | 1 | 427 | 1 | 366 | 6.35e-37 | 142 |
Find 170 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCAACCTGTTTAAATTTA+AGG | 0.068365 | 5_3:-51314013 | None:intergenic |
| TTTCCTCCAATTACTTTCTT+AGG | 0.109494 | 5_3:-51311598 | None:intergenic |
| TGCAACTGTTGCTTCATTAA+AGG | 0.170101 | 5_3:+51311812 | Msa0816730:CDS |
| TAAAATTGTCACCAACTAAA+AGG | 0.227932 | 5_3:-51311344 | None:intergenic |
| ATGATGACGAAAACTTTATT+AGG | 0.242004 | 5_3:+51311023 | Msa0816730:CDS |
| TTTAAGGCCAGCAAAGAATT+TGG | 0.244729 | 5_3:-51313997 | None:intergenic |
| GGAGCTATTGGATAGGGTTT+TGG | 0.246722 | 5_3:+51313807 | Msa0816730:CDS |
| AATTACTTTCTTAGGGGAAT+TGG | 0.254177 | 5_3:-51311590 | None:intergenic |
| GGAAACAATTCCCCACAAAA+TGG | 0.254603 | 5_3:-51310947 | None:intergenic |
| TGACAGCATAATGAAGAAAA+AGG | 0.275761 | 5_3:+51314250 | Msa0816730:three_prime_UTR |
| TTCCTTACCAAATTCTTTGC+TGG | 0.276724 | 5_3:+51313990 | Msa0816730:three_prime_UTR |
| AATTCCCCTAAGAAAGTAAT+TGG | 0.278506 | 5_3:+51311592 | Msa0816730:CDS |
| AGAGACTTGGTAATGGATTC+AGG | 0.281628 | 5_3:+51310388 | Msa0816730:CDS |
| GAAGCAACAGTTGCAGTTTC+GGG | 0.282983 | 5_3:-51311804 | None:intergenic |
| TGCAAAAGTTCGCGTTTCTA+AGG | 0.302423 | 5_3:+51311636 | Msa0816730:CDS |
| TTACTTACTCTTACAGATCT+TGG | 0.307105 | 5_3:-51310441 | None:intergenic |
| TGGCAACTTGTAACTAAATA+AGG | 0.308979 | 5_3:+51314031 | Msa0816730:three_prime_UTR |
| TGGTTTGTGTGCAGGATAAA+TGG | 0.309116 | 5_3:+51313722 | Msa0816730:intron |
| TGAAGCAACAGTTGCAGTTT+CGG | 0.311212 | 5_3:-51311805 | None:intergenic |
| CGAAATCGCTCTTCTGTTAA+CGG | 0.314885 | 5_3:-51310668 | None:intergenic |
| AGTTTCGCATCGAGTCATTC+AGG | 0.318139 | 5_3:+51311757 | Msa0816730:CDS |
| TTCAAATTGGAGAATAGGTT+TGG | 0.318263 | 5_3:+51310797 | Msa0816730:CDS |
| CTAACCTATCACCCTTTGTT+TGG | 0.323196 | 5_3:-51309571 | None:intergenic |
| TCCTCCTTGCTTACAAATAC+TGG | 0.330363 | 5_3:+51312706 | Msa0816730:CDS |
| ACATTGCACGCAAAATAATT+AGG | 0.331937 | 5_3:+51311092 | Msa0816730:CDS |
| AAAATGCAAAAGAAAATCTA+TGG | 0.338430 | 5_3:-51309465 | None:intergenic |
| ACGCTGTTGACTTGTAACTA+TGG | 0.340082 | 5_3:+51313926 | Msa0816730:three_prime_UTR |
| GAGGCGGTGATGACTATAAT+AGG | 0.341788 | 5_3:+51311998 | Msa0816730:CDS |
| GGGAGGAATGCTAGTAAGTT+AGG | 0.342627 | 5_3:+51310992 | Msa0816730:CDS |
| AGGGATTTCTGTTGCCAAAC+AGG | 0.342636 | 5_3:+51312681 | Msa0816730:CDS |
| GGAACTCCCTCCATAGATTC+AGG | 0.342756 | 5_3:+51312661 | Msa0816730:CDS |
| TGGAGCAACCTTCCAGTGTT+TGG | 0.343786 | 5_3:-51311134 | None:intergenic |
| TTCCTCCAATTACTTTCTTA+GGG | 0.346950 | 5_3:-51311597 | None:intergenic |
| GCCAGTTCCTCAGGAGCTAT+TGG | 0.348630 | 5_3:+51313795 | Msa0816730:CDS |
| CTTGGACATCTAGGTACCTT+AGG | 0.349158 | 5_3:-51310423 | None:intergenic |
| TCAACTTCAGACACAGAAAA+TGG | 0.357936 | 5_3:-51312913 | None:intergenic |
| CTAGATTGCTGTAATGTAAC+TGG | 0.358462 | 5_3:+51314056 | Msa0816730:three_prime_UTR |
| TGCTGGCCTTAAATTTAAAC+AGG | 0.360046 | 5_3:+51314007 | Msa0816730:three_prime_UTR |
| GCATGTTGGTGTTCTTGTTA+AGG | 0.368440 | 5_3:+51312030 | Msa0816730:CDS |
| AACCTTCCAGTGTTTGGAAT+TGG | 0.390971 | 5_3:-51311128 | None:intergenic |
| CGCGTTTCTAAGGATTCTAA+TGG | 0.394563 | 5_3:+51311646 | Msa0816730:CDS |
| TCCAATAGCTCCTGAGGAAC+TGG | 0.395946 | 5_3:-51313796 | None:intergenic |
| TTCAGACTTCACATTATTGT+TGG | 0.402330 | 5_3:-51310771 | None:intergenic |
| GCTTCTCCAGTTGTTTGTGC+TGG | 0.408670 | 5_3:+51312157 | Msa0816730:CDS |
| AAGCAAGGAGGAACCCTGTT+TGG | 0.410467 | 5_3:-51312695 | None:intergenic |
| TGTTCACAATCTTTCAACTT+TGG | 0.411776 | 5_3:-51311154 | None:intergenic |
| AACAGAAATCCCTGAATCTA+TGG | 0.411949 | 5_3:-51312671 | None:intergenic |
| GGATCACCAGCACAAACAAC+TGG | 0.414617 | 5_3:-51312163 | None:intergenic |
| TCAACCAAACAAAGGGTGAT+AGG | 0.416597 | 5_3:+51309567 | Msa0816730:five_prime_UTR |
| CATGTTGGTGTTCTTGTTAA+GGG | 0.416802 | 5_3:+51312031 | Msa0816730:CDS |
| GCTTGACATGCTGCTTGGAT+TGG | 0.423506 | 5_3:-51313855 | None:intergenic |
| TGACATGCTGCTTGGATTGG+TGG | 0.426360 | 5_3:-51313852 | None:intergenic |
| GAAACAATTCCCCACAAAAT+GGG | 0.429990 | 5_3:-51310946 | None:intergenic |
| GGAACGTCAACGTAAAGTTC+TGG | 0.430171 | 5_3:-51311783 | None:intergenic |
| CATCACGAGGCTGACAGTTC+AGG | 0.432205 | 5_3:+51310860 | Msa0816730:CDS |
| TAATGGATTCAGGGACTATC+AGG | 0.432252 | 5_3:+51310398 | Msa0816730:CDS |
| GAGAGGACAGCCAGTTCCTC+AGG | 0.432830 | 5_3:+51313786 | Msa0816730:CDS |
| TTGATGCTTGACATGCTGCT+TGG | 0.441541 | 5_3:-51313860 | None:intergenic |
| GGCCTTAAATTTAAACAGGT+TGG | 0.445616 | 5_3:+51314011 | Msa0816730:three_prime_UTR |
| GATAAACTAACACAAGATTC+CGG | 0.452961 | 5_3:+51312787 | Msa0816730:CDS |
| CTTACAGATCTTGGACATCT+AGG | 0.453561 | 5_3:-51310432 | None:intergenic |
| GTTCATGCAGTTGAGGAAGT+TGG | 0.454012 | 5_3:+51312943 | Msa0816730:CDS |
| CAAGGGAAGAAGCTGATTCA+TGG | 0.454467 | 5_3:-51312750 | None:intergenic |
| TTCCTTGAAAAGGAAGCATT+GGG | 0.461169 | 5_3:-51310968 | None:intergenic |
| ACAGAAGAGCGATTTCGAAA+TGG | 0.464717 | 5_3:+51310674 | Msa0816730:CDS |
| AAAATTGTCACCAACTAAAA+GGG | 0.465765 | 5_3:-51311343 | None:intergenic |
| TCCTCAGGAGCTATTGGATA+GGG | 0.470302 | 5_3:+51313801 | Msa0816730:CDS |
| ATTCCTCCCATTCCTTGAAA+AGG | 0.474110 | 5_3:-51310978 | None:intergenic |
| TAGGACTTATGTAGACTTGA+AGG | 0.479281 | 5_3:+51313091 | Msa0816730:CDS |
| GGCTGTCCTCTCCTTTGTTG+AGG | 0.480024 | 5_3:-51313775 | None:intergenic |
| ATTCCTTGAAAAGGAAGCAT+TGG | 0.481452 | 5_3:-51310969 | None:intergenic |
| TTGGATTTGTCTAGGTCTCT+AGG | 0.484229 | 5_3:+51312640 | Msa0816730:intron |
| GCAGTTGAGGAAGTTGGAAC+TGG | 0.488859 | 5_3:+51312949 | Msa0816730:CDS |
| AGAGGAAGAAATTATCAGAC+AGG | 0.491022 | 5_3:+51311521 | Msa0816730:CDS |
| GAACTACTTGCATCTTTAGC+CGG | 0.491484 | 5_3:+51310590 | Msa0816730:CDS |
| CGTAAATTCAACCAAACAAA+GGG | 0.494861 | 5_3:+51309560 | Msa0816730:five_prime_UTR |
| GAGAAACATCTTGAGAGTGC+TGG | 0.500393 | 5_3:+51310719 | Msa0816730:CDS |
| CGTGAAGGTCTAAAAGCCTT+CGG | 0.501813 | 5_3:-51311067 | None:intergenic |
| GTGAGAGGAACAGTAAGAAC+AGG | 0.506109 | 5_3:-51311300 | None:intergenic |
| TGGTCCAGTGTTCTGATTCA+CGG | 0.506571 | 5_3:-51312860 | None:intergenic |
| AGACACAGAAAATGGTCTCC+TGG | 0.509618 | 5_3:-51312905 | None:intergenic |
| AGCTTGTACAGCGTCGAACC+AGG | 0.512219 | 5_3:+51312887 | Msa0816730:CDS |
| AACAGAACTCTTCGTCAGAC+TGG | 0.514395 | 5_3:+51312073 | Msa0816730:CDS |
| CCGCTCAAGTTGGCTAAAGA+AGG | 0.515374 | 5_3:-51310911 | None:intergenic |
| CAAGAGTGGCCATCCTCGAC+TGG | 0.517246 | 5_3:-51310560 | None:intergenic |
| TGCGACCCTCGAGTCATAAG+AGG | 0.517455 | 5_3:+51311452 | Msa0816730:CDS |
| TTGAAGAAGAGACTTGGTAA+TGG | 0.519239 | 5_3:+51310381 | Msa0816730:CDS |
| GGTGCAAAGAAAAGCTGTCT+TGG | 0.520276 | 5_3:-51311322 | None:intergenic |
| AGAAACATCTTGAGAGTGCT+GGG | 0.523924 | 5_3:+51310720 | Msa0816730:CDS |
| AGCAAAGAATTTGGTAAGGA+AGG | 0.526965 | 5_3:-51313988 | None:intergenic |
| GAACTCCCTCCATAGATTCA+GGG | 0.526972 | 5_3:+51312662 | Msa0816730:CDS |
| GAGACTTGGTAATGGATTCA+GGG | 0.529036 | 5_3:+51310389 | Msa0816730:CDS |
| GATTGTGAACATTCTCGCTA+TGG | 0.532088 | 5_3:+51311166 | Msa0816730:CDS |
| CACAAGTGGTTGGACAACAT+TGG | 0.539637 | 5_3:-51313884 | None:intergenic |
| GGCCAGCAAAGAATTTGGTA+AGG | 0.540195 | 5_3:-51313992 | None:intergenic |
| TCAAGTCTACATAAGTCCTA+TGG | 0.543438 | 5_3:-51313088 | None:intergenic |
| GGTCCAGTGTTCTGATTCAC+GGG | 0.543575 | 5_3:-51312859 | None:intergenic |
| TGAACATTCTCGCTATGGTA+AGG | 0.546372 | 5_3:+51311171 | Msa0816730:CDS |
| AATGCCTCAGTACTATGAGC+TGG | 0.546437 | 5_3:-51312826 | None:intergenic |
| AGGTCTAAAAGCCTTCGGTT+TGG | 0.548415 | 5_3:-51311062 | None:intergenic |
| GGGATTTCTGTTGCCAAACA+GGG | 0.550679 | 5_3:+51312682 | Msa0816730:CDS |
| TTGGACATCTAGGTACCTTA+GGG | 0.553309 | 5_3:-51310422 | None:intergenic |
| AGATAAACTCGGTTTCGTGT+TGG | 0.553459 | 5_3:+51312117 | Msa0816730:CDS |
| ATGTAGCATCTCAGCCTACC+AGG | 0.553875 | 5_3:+51312194 | Msa0816730:CDS |
| AGTGTCACACTCTGTTGAAG+AGG | 0.554973 | 5_3:+51311503 | Msa0816730:CDS |
| TCTACATAATCACAAGTGGT+TGG | 0.557057 | 5_3:-51313894 | None:intergenic |
| TTTAATGTTACCGCTCAAGT+TGG | 0.557954 | 5_3:-51310921 | None:intergenic |
| AGCACTTGTTCATGCAGTTG+AGG | 0.558933 | 5_3:+51312936 | Msa0816730:CDS |
| TTCCAATTCCAAACACTGGA+AGG | 0.567244 | 5_3:+51311126 | Msa0816730:CDS |
| ACTCTCCTTCAGCAACTCAC+CGG | 0.568548 | 5_3:-51310609 | None:intergenic |
| TGGAACAGAAACTAGCGCTC+CGG | 0.569116 | 5_3:-51312806 | None:intergenic |
| GGTTCGACGCTGTACAAGCT+CGG | 0.569476 | 5_3:-51312884 | None:intergenic |
| TTTAGCCGGTGAGTTGCTGA+AGG | 0.574743 | 5_3:+51310604 | Msa0816730:CDS |
| CAGGGACTATCAGGTCCCTA+AGG | 0.575068 | 5_3:+51310407 | Msa0816730:CDS |
| TCGTAAATTCAACCAAACAA+AGG | 0.575442 | 5_3:+51309559 | Msa0816730:five_prime_UTR |
| TCAACTTTCGCTCACCTGGT+AGG | 0.576936 | 5_3:-51312208 | None:intergenic |
| ACCGCCAGTATTTGTAAGCA+AGG | 0.577016 | 5_3:-51312710 | None:intergenic |
| TCCCCTAAGAAAGTAATTGG+AGG | 0.577061 | 5_3:+51311595 | Msa0816730:CDS |
| GCAAAATAATTAGGAAGCGG+TGG | 0.577586 | 5_3:+51311101 | Msa0816730:CDS |
| GTCTTCCTCTTATGACTCGA+GGG | 0.577638 | 5_3:-51311457 | None:intergenic |
| AGTCTTCCTCTTATGACTCG+AGG | 0.577787 | 5_3:-51311458 | None:intergenic |
| AGTGATAAATGTTCATGCTA+TGG | 0.579354 | 5_3:+51310356 | Msa0816730:exon |
| CACGCAAAATAATTAGGAAG+CGG | 0.581824 | 5_3:+51311098 | Msa0816730:CDS |
| GTGATGACTATAATAGGAGG+TGG | 0.582455 | 5_3:+51312004 | Msa0816730:CDS |
| GGAGAAGCTTGAGAAGAGCT+AGG | 0.582931 | 5_3:-51312142 | None:intergenic |
| CGACGCTGTACAAGCTCGGA+TGG | 0.583494 | 5_3:-51312880 | None:intergenic |
| AGAAAAGCTGTCTTGGTGAG+AGG | 0.584501 | 5_3:-51311315 | None:intergenic |
| TCCTCCAATTACTTTCTTAG+GGG | 0.586162 | 5_3:-51311596 | None:intergenic |
| TGAGATGCTACATGGTGAGA+AGG | 0.589368 | 5_3:-51312184 | None:intergenic |
| TTCAAGAAACCAGTCGAGGA+TGG | 0.590011 | 5_3:+51310551 | Msa0816730:CDS |
| ATCAGATGCATTGCTAGAGG+TGG | 0.590241 | 5_3:-51310639 | None:intergenic |
| ATCTCTCCTCAACAAAGGAG+AGG | 0.592039 | 5_3:+51313769 | Msa0816730:CDS |
| CAAAGTTTGCACCAAACCGA+AGG | 0.594191 | 5_3:+51311051 | Msa0816730:CDS |
| TTCCTCAGGAGCTATTGGAT+AGG | 0.595354 | 5_3:+51313800 | Msa0816730:CDS |
| TATCAGATATAGTGTCAGCA+AGG | 0.595686 | 5_3:-51312768 | None:intergenic |
| TTTATAGAGGACAGTTATGG+AGG | 0.597438 | 5_3:+51311979 | Msa0816730:intron |
| AGAAATCCCTGAATCTATGG+AGG | 0.598839 | 5_3:-51312668 | None:intergenic |
| AACATCAGATGCATTGCTAG+AGG | 0.601082 | 5_3:-51310642 | None:intergenic |
| CTGAACTGTCAGCCTCGTGA+TGG | 0.601669 | 5_3:-51310859 | None:intergenic |
| GAGGAAGAAATTATCAGACA+GGG | 0.603590 | 5_3:+51311522 | Msa0816730:CDS |
| AAACAATTCCCCACAAAATG+GGG | 0.608737 | 5_3:-51310945 | None:intergenic |
| GGACTTCCAATTCCAAACAC+TGG | 0.611770 | 5_3:+51311122 | Msa0816730:CDS |
| ATAGAGGACAGTTATGGAGG+CGG | 0.617071 | 5_3:+51311982 | Msa0816730:intron |
| TTGAGGAAGTTGGAACTGGA+AGG | 0.620909 | 5_3:+51312953 | Msa0816730:CDS |
| ACCCTATCCAATAGCTCCTG+AGG | 0.621261 | 5_3:-51313802 | None:intergenic |
| TCGATGCTAACTCATGGTGG+AGG | 0.623580 | 5_3:+51311547 | Msa0816730:CDS |
| TCTTTCTACATAATCACAAG+TGG | 0.623634 | 5_3:-51313898 | None:intergenic |
| TTGCGTGCAATGTATCGTGA+AGG | 0.623664 | 5_3:-51311082 | None:intergenic |
| TGGTAGGCTGAGATGCTACA+TGG | 0.626444 | 5_3:-51312192 | None:intergenic |
| CCTTCTTTAGCCAACTTGAG+CGG | 0.626589 | 5_3:+51310911 | Msa0816730:CDS |
| ATGTTGGTGTTCTTGTTAAG+GGG | 0.626831 | 5_3:+51312032 | Msa0816730:CDS |
| AGGGGTTCGATGCTAACTCA+TGG | 0.630655 | 5_3:+51311541 | Msa0816730:CDS |
| GTAGTTCAAAAGCACAAGAG+TGG | 0.631884 | 5_3:-51310574 | None:intergenic |
| ATCAGATATAGTGTCAGCAA+GGG | 0.636117 | 5_3:-51312767 | None:intergenic |
| TATCCAACTGAAGAAAAGCA+AGG | 0.636708 | 5_3:-51314283 | None:intergenic |
| AAAGAAAATATAGATAAACT+CGG | 0.652207 | 5_3:+51312106 | Msa0816730:CDS |
| TCCTTGCTTACAAATACTGG+CGG | 0.652781 | 5_3:+51312709 | Msa0816730:CDS |
| AACAGTAAGAACAGGACTTG+CGG | 0.653828 | 5_3:-51311292 | None:intergenic |
| GTTCCCGTGAATCAGAACAC+TGG | 0.655650 | 5_3:+51312856 | Msa0816730:CDS |
| GAAATCCCTGAATCTATGGA+GGG | 0.665973 | 5_3:-51312667 | None:intergenic |
| ATAGGAGGTGGAGTGCATGT+TGG | 0.667170 | 5_3:+51312016 | Msa0816730:CDS |
| GCGGTGATGACTATAATAGG+AGG | 0.667399 | 5_3:+51312001 | Msa0816730:CDS |
| TGTTCCAGCTCATAGTACTG+AGG | 0.671950 | 5_3:+51312822 | Msa0816730:CDS |
| TGCGTTCAAGAAACCAGTCG+AGG | 0.672753 | 5_3:+51310547 | Msa0816730:CDS |
| ATGGTGTTGAAGAAGAGACT+TGG | 0.697633 | 5_3:+51310375 | Msa0816730:CDS |
| AGGAAGAAATTATCAGACAG+GGG | 0.702812 | 5_3:+51311523 | Msa0816730:CDS |
| GGTTCGATGCTAACTCATGG+TGG | 0.706099 | 5_3:+51311544 | Msa0816730:CDS |
| GTAATTGGAGGAAATAACCG+TGG | 0.709826 | 5_3:+51311607 | Msa0816730:CDS |
| GCCAGTATTTGTAAGCAAGG+AGG | 0.726150 | 5_3:-51312707 | None:intergenic |
| AGAAGTTTCAAACCATCACG+AGG | 0.743753 | 5_3:+51310847 | Msa0816730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTTTTTTTATGTAATT+GGG | + | chr5_3:51309633-51309652 | Msa0816730:intron | 10.0% |
| !! | TTTCAGTTAAAAAAAAAAAA+AGG | - | chr5_3:51311405-51311424 | None:intergenic | 10.0% |
| !!! | GTTTTGTTTTTTTATGTAAT+TGG | + | chr5_3:51309632-51309651 | Msa0816730:intron | 15.0% |
| !!! | TAAAAGTACAAAGAATTATA+AGG | - | chr5_3:51309962-51309981 | None:intergenic | 15.0% |
| !! | TATTATCGAAAAAAATTATG+TGG | + | chr5_3:51310227-51310246 | Msa0816730:intron | 15.0% |
| !! | AAAAAAAAAGGAAAAAACTT+GGG | - | chr5_3:51311393-51311412 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAGGAAAAAACT+TGG | - | chr5_3:51311394-51311413 | None:intergenic | 15.0% |
| !!! | ATTGTTTAACTTTTTTATAG+AGG | + | chr5_3:51311966-51311985 | Msa0816730:intron | 15.0% |
| !! | AAAGAAAATATAGATAAACT+CGG | + | chr5_3:51312106-51312125 | Msa0816730:CDS | 15.0% |
| !! | ATAAGAATTATTCAATTGAA+TGG | - | chr5_3:51312599-51312618 | None:intergenic | 15.0% |
| !! | AAAATGCAAAAGAAAATCTA+TGG | - | chr5_3:51309468-51309487 | None:intergenic | 20.0% |
| !! | ATTTGCAAGAAAAAACATTT+GGG | - | chr5_3:51309527-51309546 | None:intergenic | 20.0% |
| !! | AATTTGCAAGAAAAAACATT+TGG | - | chr5_3:51309528-51309547 | None:intergenic | 20.0% |
| !!! | GTTAGTTTCTTGTTATTTTA+AGG | + | chr5_3:51309589-51309608 | Msa0816730:intron | 20.0% |
| !!! | TTGATTTTTTTCTTTCTTTC+TGG | + | chr5_3:51309745-51309764 | Msa0816730:intron | 20.0% |
| !!! | TGATTTTTTTCTTTCTTTCT+GGG | + | chr5_3:51309746-51309765 | Msa0816730:intron | 20.0% |
| !!! | TTTTCTTCATGTTGTTAATT+TGG | + | chr5_3:51309787-51309806 | Msa0816730:intron | 20.0% |
| !!! | AAATTTTCAAATTGGAGAAT+AGG | + | chr5_3:51310792-51310811 | Msa0816730:CDS | 20.0% |
| !!! | AATGTGTAATTTGTAGATAA+TGG | + | chr5_3:51311427-51311446 | Msa0816730:intron | 20.0% |
| !!! | ATTTAGTTTCATCAATAGTT+TGG | + | chr5_3:51311901-51311920 | Msa0816730:intron | 20.0% |
| !! | ATAGCTTATATTAAAACAGT+TGG | - | chr5_3:51312356-51312375 | None:intergenic | 20.0% |
| !!! | CTTTATCTAATTTTTGCAAT+TGG | + | chr5_3:51312621-51312640 | Msa0816730:intron | 20.0% |
| !! | AGAATTAAGATATGATAGAA+GGG | - | chr5_3:51313121-51313140 | None:intergenic | 20.0% |
| !! | AAGAATTAAGATATGATAGA+AGG | - | chr5_3:51313122-51313141 | None:intergenic | 20.0% |
| !! | TAAATTTAAAGAGAAAGATG+AGG | + | chr5_3:51313172-51313191 | Msa0816730:intron | 20.0% |
| !!! | TCTTAGTTTTAAGTTAGATT+TGG | - | chr5_3:51313368-51313387 | None:intergenic | 20.0% |
| !! | GTGAAAGAACAATAAATTTA+AGG | - | chr5_3:51313424-51313443 | None:intergenic | 20.0% |
| !! | TCAAAATAAGGAAAATGTTA+TGG | - | chr5_3:51313465-51313484 | None:intergenic | 20.0% |
| !! | TTTATCATAAATATCAGACT+CGG | + | chr5_3:51313604-51313623 | Msa0816730:intron | 20.0% |
| ! | AACTTGAAACAGAGTAAAAA+AGG | + | chr5_3:51309425-51309444 | Msa0816730:five_prime_UTR | 25.0% |
| !! | ACAGAGTAAAAAAGGATTTT+TGG | + | chr5_3:51309433-51309452 | Msa0816730:five_prime_UTR | 25.0% |
| !! | CAGAGTAAAAAAGGATTTTT+GGG | + | chr5_3:51309434-51309453 | Msa0816730:five_prime_UTR | 25.0% |
| !!! | TCTTGTTATTTTAAGGATTC+TGG | + | chr5_3:51309596-51309615 | Msa0816730:intron | 25.0% |
| !!! | GATTTTTTTCTTTCTTTCTG+GGG | + | chr5_3:51309747-51309766 | Msa0816730:intron | 25.0% |
| !!! | TTAATTTGGCTTGAAATTCA+AGG | + | chr5_3:51309801-51309820 | Msa0816730:intron | 25.0% |
| !!! | TAATTTGGCTTGAAATTCAA+GGG | + | chr5_3:51309802-51309821 | Msa0816730:intron | 25.0% |
| !!! | TGTTGACTTTTTTCATCATA+TGG | + | chr5_3:51309986-51310005 | Msa0816730:intron | 25.0% |
| ! | ATCTTAGCAAATAGAGAAAT+CGG | - | chr5_3:51310161-51310180 | None:intergenic | 25.0% |
| !!! | TTCTCTATTTGCTAAGATTT+TGG | + | chr5_3:51310163-51310182 | Msa0816730:intron | 25.0% |
| ! | AAAAAAATTATGTGGACGAT+TGG | + | chr5_3:51310235-51310254 | Msa0816730:intron | 25.0% |
| !! | TTTTTATGACAGAGATAGAT+AGG | + | chr5_3:51310300-51310319 | Msa0816730:intron | 25.0% |
| ! | AAAATCAATTGCAAGAATTG+CGG | - | chr5_3:51310470-51310489 | None:intergenic | 25.0% |
| !!! | GATTTTTACCTGTTTTTGTT+TGG | + | chr5_3:51310484-51310503 | Msa0816730:intron | 25.0% |
| !!! | GAAGTCTGAAATTTTCAAAT+TGG | + | chr5_3:51310784-51310803 | Msa0816730:CDS | 25.0% |
| !! | ATGATGACGAAAACTTTATT+AGG | + | chr5_3:51311023-51311042 | Msa0816730:CDS | 25.0% |
| ! | AAAATTGTCACCAACTAAAA+GGG | - | chr5_3:51311346-51311365 | None:intergenic | 25.0% |
| ! | TAAAATTGTCACCAACTAAA+AGG | - | chr5_3:51311347-51311366 | None:intergenic | 25.0% |
| !! | TTAAAGGTATGATGATTGAA+TGG | + | chr5_3:51311828-51311847 | Msa0816730:intron | 25.0% |
| !!! | TTTTTTATAGAGGACAGTTA+TGG | + | chr5_3:51311976-51311995 | Msa0816730:intron | 25.0% |
| !!! | GTTGTTTTTATAAGCTATCA+TGG | + | chr5_3:51312378-51312397 | Msa0816730:intron | 25.0% |
| ! | ACTTAGTTTATTGCCATTAA+AGG | - | chr5_3:51312522-51312541 | None:intergenic | 25.0% |
| ! | TTTAATGGCAATAAACTAAG+TGG | + | chr5_3:51312521-51312540 | Msa0816730:intron | 25.0% |
| ! | ATCCTGAAGAAATTTGATTA+CGG | + | chr5_3:51312566-51312585 | Msa0816730:intron | 25.0% |
| !!! | GACATTTTTTTAAACTATGC+AGG | + | chr5_3:51313027-51313046 | Msa0816730:intron | 25.0% |
| !!! | ATTTTTTTAAACTATGCAGG+TGG | + | chr5_3:51313030-51313049 | Msa0816730:intron | 25.0% |
| !!! | TAGAATTATGCAGTTGTTTT+TGG | + | chr5_3:51313549-51313568 | Msa0816730:intron | 25.0% |
| !!! | TTGCTGCATTATTTTATTAC+TGG | + | chr5_3:51314318-51314337 | Msa0816730:three_prime_UTR | 25.0% |
| TCGTAAATTCAACCAAACAA+AGG | + | chr5_3:51309559-51309578 | Msa0816730:five_prime_UTR | 30.0% | |
| CGTAAATTCAACCAAACAAA+GGG | + | chr5_3:51309560-51309579 | Msa0816730:five_prime_UTR | 30.0% | |
| ATTCCAAATCTTTCCATCAT+GGG | - | chr5_3:51309661-51309680 | None:intergenic | 30.0% | |
| AATTCCAAATCTTTCCATCA+TGG | - | chr5_3:51309662-51309681 | None:intergenic | 30.0% | |
| !!! | CATTATGTACTGATTTTGGA+TGG | + | chr5_3:51310067-51310086 | Msa0816730:intron | 30.0% |
| TCAAGTCGATTATCACAAAT+TGG | - | chr5_3:51310265-51310284 | None:intergenic | 30.0% | |
| AGTGATAAATGTTCATGCTA+TGG | + | chr5_3:51310356-51310375 | Msa0816730:exon | 30.0% | |
| TTACTTACTCTTACAGATCT+TGG | - | chr5_3:51310444-51310463 | None:intergenic | 30.0% | |
| !!! | TTTACCTGTTTTTGTTTGGA+TGG | + | chr5_3:51310488-51310507 | Msa0816730:intron | 30.0% |
| ! | TTGAGTTTGAAATTCTTCAG+AGG | + | chr5_3:51310519-51310538 | Msa0816730:intron | 30.0% |
| TTCAGACTTCACATTATTGT+TGG | - | chr5_3:51310774-51310793 | None:intergenic | 30.0% | |
| TTCAAATTGGAGAATAGGTT+TGG | + | chr5_3:51310797-51310816 | Msa0816730:CDS | 30.0% | |
| ! | AACATTAAATCCCCATTTTG+TGG | + | chr5_3:51310935-51310954 | Msa0816730:CDS | 30.0% |
| ! | ACATTAAATCCCCATTTTGT+GGG | + | chr5_3:51310936-51310955 | Msa0816730:CDS | 30.0% |
| ACATTGCACGCAAAATAATT+AGG | + | chr5_3:51311092-51311111 | Msa0816730:CDS | 30.0% | |
| TGTTCACAATCTTTCAACTT+TGG | - | chr5_3:51311157-51311176 | None:intergenic | 30.0% | |
| CACATATATGTCTATGAGTT+AGG | + | chr5_3:51311235-51311254 | Msa0816730:intron | 30.0% | |
| AATTACTTTCTTAGGGGAAT+TGG | - | chr5_3:51311593-51311612 | None:intergenic | 30.0% | |
| AATTCCCCTAAGAAAGTAAT+TGG | + | chr5_3:51311592-51311611 | Msa0816730:CDS | 30.0% | |
| TTCCTCCAATTACTTTCTTA+GGG | - | chr5_3:51311600-51311619 | None:intergenic | 30.0% | |
| TTTCCTCCAATTACTTTCTT+AGG | - | chr5_3:51311601-51311620 | None:intergenic | 30.0% | |
| TCTAATGGTAATTTATTGCG+TGG | + | chr5_3:51311661-51311680 | Msa0816730:intron | 30.0% | |
| TAGTTTCATCAATAGTTTGG+AGG | + | chr5_3:51311904-51311923 | Msa0816730:intron | 30.0% | |
| AGTTTCATCAATAGTTTGGA+GGG | + | chr5_3:51311905-51311924 | Msa0816730:intron | 30.0% | |
| CTAGTACATGAACTCAAATA+AGG | + | chr5_3:51312483-51312502 | Msa0816730:intron | 30.0% | |
| AACCGTAATCAAATTTCTTC+AGG | - | chr5_3:51312571-51312590 | None:intergenic | 30.0% | |
| ! | TTTTGCAATTGGATTTGTCT+AGG | + | chr5_3:51312632-51312651 | Msa0816730:intron | 30.0% |
| GATAAACTAACACAAGATTC+CGG | + | chr5_3:51312787-51312806 | Msa0816730:CDS | 30.0% | |
| ! | TAACACCTATAATGGAAAAG+TGG | + | chr5_3:51313195-51313214 | Msa0816730:intron | 30.0% |
| !!! | TGATGGGACATTTTAGTTTA+AGG | + | chr5_3:51313241-51313260 | Msa0816730:intron | 30.0% |
| GATCATTATTTGACATGCTT+AGG | + | chr5_3:51313315-51313334 | Msa0816730:intron | 30.0% | |
| ATGCAACTACGATCAAAATA+AGG | - | chr5_3:51313477-51313496 | None:intergenic | 30.0% | |
| ! | TTCCTAATGACTTGAACTTT+TGG | + | chr5_3:51313702-51313721 | Msa0816730:intron | 30.0% |
| AACCAAAAGTTCAAGTCATT+AGG | - | chr5_3:51313707-51313726 | None:intergenic | 30.0% | |
| TCTTTCTACATAATCACAAG+TGG | - | chr5_3:51313901-51313920 | None:intergenic | 30.0% | |
| TGCCAACCTGTTTAAATTTA+AGG | - | chr5_3:51314016-51314035 | None:intergenic | 30.0% | |
| TGGCAACTTGTAACTAAATA+AGG | + | chr5_3:51314031-51314050 | Msa0816730:three_prime_UTR | 30.0% | |
| TGACAGCATAATGAAGAAAA+AGG | + | chr5_3:51314250-51314269 | Msa0816730:three_prime_UTR | 30.0% | |
| GCAAGAAAAAACATTTGGGT+TGG | - | chr5_3:51309523-51309542 | None:intergenic | 35.0% | |
| ! | GGATTCTGGATTCTCAATTT+TGG | + | chr5_3:51309610-51309629 | Msa0816730:intron | 35.0% |
| AACCAGTTTCACAACAAACA+TGG | - | chr5_3:51309709-51309728 | None:intergenic | 35.0% | |
| !!! | GGCTCATTATGTACTGATTT+TGG | + | chr5_3:51310063-51310082 | Msa0816730:intron | 35.0% |
| ! | ACAGGTTGAGATGAATTACA+AGG | - | chr5_3:51310107-51310126 | None:intergenic | 35.0% |
| AATTCATCTCAACCTGTGTT+AGG | + | chr5_3:51310110-51310129 | Msa0816730:intron | 35.0% | |
| ! | TTGAAGAAGAGACTTGGTAA+TGG | + | chr5_3:51310381-51310400 | Msa0816730:CDS | 35.0% |
| AACACCATCCAAACAAAAAC+AGG | - | chr5_3:51310495-51310514 | None:intergenic | 35.0% | |
| ! | GTTTGAAATTCTTCAGAGGA+CGG | + | chr5_3:51310523-51310542 | Msa0816730:intron | 35.0% |
| TTTAATGTTACCGCTCAAGT+TGG | - | chr5_3:51310924-51310943 | None:intergenic | 35.0% | |
| ! | CATTAAATCCCCATTTTGTG+GGG | + | chr5_3:51310937-51310956 | Msa0816730:CDS | 35.0% |
| AAACAATTCCCCACAAAATG+GGG | - | chr5_3:51310948-51310967 | None:intergenic | 35.0% | |
| GAAACAATTCCCCACAAAAT+GGG | - | chr5_3:51310949-51310968 | None:intergenic | 35.0% | |
| !! | TTCCTTGAAAAGGAAGCATT+GGG | - | chr5_3:51310971-51310990 | None:intergenic | 35.0% |
| ! | ATTCCTTGAAAAGGAAGCAT+TGG | - | chr5_3:51310972-51310991 | None:intergenic | 35.0% |
| !! | AATGCTTCCTTTTCAAGGAA+TGG | + | chr5_3:51310971-51310990 | Msa0816730:CDS | 35.0% |
| !! | ATGCTTCCTTTTCAAGGAAT+GGG | + | chr5_3:51310972-51310991 | Msa0816730:CDS | 35.0% |
| CACGCAAAATAATTAGGAAG+CGG | + | chr5_3:51311098-51311117 | Msa0816730:CDS | 35.0% | |
| !!! | GAGTTAGGCTGTTCTTTTTT+TGG | + | chr5_3:51311250-51311269 | Msa0816730:intron | 35.0% |
| ! | TTTCTTTGCACCCTTTTAGT+TGG | + | chr5_3:51311333-51311352 | Msa0816730:CDS | 35.0% |
| AGAGGAAGAAATTATCAGAC+AGG | + | chr5_3:51311521-51311540 | Msa0816730:CDS | 35.0% | |
| GAGGAAGAAATTATCAGACA+GGG | + | chr5_3:51311522-51311541 | Msa0816730:CDS | 35.0% | |
| AGGAAGAAATTATCAGACAG+GGG | + | chr5_3:51311523-51311542 | Msa0816730:CDS | 35.0% | |
| TCCTCCAATTACTTTCTTAG+GGG | - | chr5_3:51311599-51311618 | None:intergenic | 35.0% | |
| ATATGTTCTTTGCATCCTAC+TGG | + | chr5_3:51311705-51311724 | Msa0816730:intron | 35.0% | |
| ! | TGCAACTGTTGCTTCATTAA+AGG | + | chr5_3:51311812-51311831 | Msa0816730:CDS | 35.0% |
| GTTTCATCAATAGTTTGGAG+GGG | + | chr5_3:51311906-51311925 | Msa0816730:intron | 35.0% | |
| TTTATAGAGGACAGTTATGG+AGG | + | chr5_3:51311979-51311998 | Msa0816730:intron | 35.0% | |
| ! | CATGTTGGTGTTCTTGTTAA+GGG | + | chr5_3:51312031-51312050 | Msa0816730:CDS | 35.0% |
| ! | ATGTTGGTGTTCTTGTTAAG+GGG | + | chr5_3:51312032-51312051 | Msa0816730:CDS | 35.0% |
| CTTGTTAAGGGGAAAAAAGT+TGG | + | chr5_3:51312043-51312062 | Msa0816730:CDS | 35.0% | |
| AACAGAAATCCCTGAATCTA+TGG | - | chr5_3:51312674-51312693 | None:intergenic | 35.0% | |
| ATCAGATATAGTGTCAGCAA+GGG | - | chr5_3:51312770-51312789 | None:intergenic | 35.0% | |
| TATCAGATATAGTGTCAGCA+AGG | - | chr5_3:51312771-51312790 | None:intergenic | 35.0% | |
| TCAACTTCAGACACAGAAAA+TGG | - | chr5_3:51312916-51312935 | None:intergenic | 35.0% | |
| TCAAGTCTACATAAGTCCTA+TGG | - | chr5_3:51313091-51313110 | None:intergenic | 35.0% | |
| TAGGACTTATGTAGACTTGA+AGG | + | chr5_3:51313091-51313110 | Msa0816730:CDS | 35.0% | |
| AGATGAGGTAACACCTATAA+TGG | + | chr5_3:51313187-51313206 | Msa0816730:intron | 35.0% | |
| !! | TCGTACCACTTTTCCATTAT+AGG | - | chr5_3:51313203-51313222 | None:intergenic | 35.0% |
| !! | ATTGCCTTTAGAGGTTTTGA+TGG | + | chr5_3:51313224-51313243 | Msa0816730:intron | 35.0% |
| !! | TTGCCTTTAGAGGTTTTGAT+GGG | + | chr5_3:51313225-51313244 | Msa0816730:intron | 35.0% |
| !!! | GGGACATTTTAGTTTAAGGT+TGG | + | chr5_3:51313245-51313264 | Msa0816730:intron | 35.0% |
| !! | GTTGGATTCACTTTTGTTAC+AGG | + | chr5_3:51313263-51313282 | Msa0816730:intron | 35.0% |
| CCATTACAACGTATAGCTAA+TGG | - | chr5_3:51313669-51313688 | None:intergenic | 35.0% | |
| CCATTAGCTATACGTTGTAA+TGG | + | chr5_3:51313666-51313685 | Msa0816730:intron | 35.0% | |
| CAAAAATCTCTCCTCAACAA+AGG | + | chr5_3:51313764-51313783 | Msa0816730:CDS | 35.0% | |
| TCTACATAATCACAAGTGGT+TGG | - | chr5_3:51313897-51313916 | None:intergenic | 35.0% | |
| AGCAAAGAATTTGGTAAGGA+AGG | - | chr5_3:51313991-51314010 | None:intergenic | 35.0% | |
| TTCCTTACCAAATTCTTTGC+TGG | + | chr5_3:51313990-51314009 | Msa0816730:three_prime_UTR | 35.0% | |
| ! | TTTAAGGCCAGCAAAGAATT+TGG | - | chr5_3:51314000-51314019 | None:intergenic | 35.0% |
| !! | TGCTGGCCTTAAATTTAAAC+AGG | + | chr5_3:51314007-51314026 | Msa0816730:three_prime_UTR | 35.0% |
| GGCCTTAAATTTAAACAGGT+TGG | + | chr5_3:51314011-51314030 | Msa0816730:three_prime_UTR | 35.0% | |
| CTAGATTGCTGTAATGTAAC+TGG | + | chr5_3:51314056-51314075 | Msa0816730:three_prime_UTR | 35.0% | |
| TATCCAACTGAAGAAAAGCA+AGG | - | chr5_3:51314286-51314305 | None:intergenic | 35.0% | |
| TCAACCAAACAAAGGGTGAT+AGG | + | chr5_3:51309567-51309586 | Msa0816730:five_prime_UTR | 40.0% | |
| CTAACCTATCACCCTTTGTT+TGG | - | chr5_3:51309574-51309593 | None:intergenic | 40.0% | |
| ATGTAATTGGGTACCCATGA+TGG | + | chr5_3:51309645-51309664 | Msa0816730:intron | 40.0% | |
| ! | GTACCCATGATGGAAAGATT+TGG | + | chr5_3:51309655-51309674 | Msa0816730:intron | 40.0% |
| !!! | TTCTGGGGTGTTGAATTTTG+AGG | + | chr5_3:51309762-51309781 | Msa0816730:intron | 40.0% |
| TGGCTTGAAATTCAAGGGTT+TGG | + | chr5_3:51309807-51309826 | Msa0816730:intron | 40.0% | |
| !! | AAGAAGCACTATCCTAACAC+AGG | - | chr5_3:51310125-51310144 | None:intergenic | 40.0% |
| ! | ATGGTGTTGAAGAAGAGACT+TGG | + | chr5_3:51310375-51310394 | Msa0816730:CDS | 40.0% |
| !! | AGAGACTTGGTAATGGATTC+AGG | + | chr5_3:51310388-51310407 | Msa0816730:CDS | 40.0% |
| !! | GAGACTTGGTAATGGATTCA+GGG | + | chr5_3:51310389-51310408 | Msa0816730:CDS | 40.0% |
| !! | TAATGGATTCAGGGACTATC+AGG | + | chr5_3:51310398-51310417 | Msa0816730:CDS | 40.0% |
| TTGGACATCTAGGTACCTTA+GGG | - | chr5_3:51310425-51310444 | None:intergenic | 40.0% | |
| CTTACAGATCTTGGACATCT+AGG | - | chr5_3:51310435-51310454 | None:intergenic | 40.0% | |
| ! | GTAGTTCAAAAGCACAAGAG+TGG | - | chr5_3:51310577-51310596 | None:intergenic | 40.0% |
| GAACTACTTGCATCTTTAGC+CGG | + | chr5_3:51310590-51310609 | Msa0816730:CDS | 40.0% | |
| AACATCAGATGCATTGCTAG+AGG | - | chr5_3:51310645-51310664 | None:intergenic | 40.0% | |
| CGAAATCGCTCTTCTGTTAA+CGG | - | chr5_3:51310671-51310690 | None:intergenic | 40.0% | |
| ACAGAAGAGCGATTTCGAAA+TGG | + | chr5_3:51310674-51310693 | Msa0816730:CDS | 40.0% | |
| !! | AGAAACATCTTGAGAGTGCT+GGG | + | chr5_3:51310720-51310739 | Msa0816730:CDS | 40.0% |
| AGAAGTTTCAAACCATCACG+AGG | + | chr5_3:51310847-51310866 | Msa0816730:CDS | 40.0% | |
| GGAAACAATTCCCCACAAAA+TGG | - | chr5_3:51310950-51310969 | None:intergenic | 40.0% | |
| ! | TTCCCAATGCTTCCTTTTCA+AGG | + | chr5_3:51310966-51310985 | Msa0816730:CDS | 40.0% |
| ATTCCTCCCATTCCTTGAAA+AGG | - | chr5_3:51310981-51311000 | None:intergenic | 40.0% | |
| GCAAAATAATTAGGAAGCGG+TGG | + | chr5_3:51311101-51311120 | Msa0816730:CDS | 40.0% | |
| TTCCAATTCCAAACACTGGA+AGG | + | chr5_3:51311126-51311145 | Msa0816730:CDS | 40.0% | |
| ! | AACCTTCCAGTGTTTGGAAT+TGG | - | chr5_3:51311131-51311150 | None:intergenic | 40.0% |
| GATTGTGAACATTCTCGCTA+TGG | + | chr5_3:51311166-51311185 | Msa0816730:CDS | 40.0% | |
| TGAACATTCTCGCTATGGTA+AGG | + | chr5_3:51311171-51311190 | Msa0816730:CDS | 40.0% | |
| AACAGTAAGAACAGGACTTG+CGG | - | chr5_3:51311295-51311314 | None:intergenic | 40.0% | |
| TCCCCTAAGAAAGTAATTGG+AGG | + | chr5_3:51311595-51311614 | Msa0816730:CDS | 40.0% | |
| GTAATTGGAGGAAATAACCG+TGG | + | chr5_3:51311607-51311626 | Msa0816730:CDS | 40.0% | |
| TGCAAAAGTTCGCGTTTCTA+AGG | + | chr5_3:51311636-51311655 | Msa0816730:CDS | 40.0% | |
| ! | CGCGTTTCTAAGGATTCTAA+TGG | + | chr5_3:51311646-51311665 | Msa0816730:CDS | 40.0% |
| !! | TGCGTGGAGTTCATTAGTTT+TGG | + | chr5_3:51311677-51311696 | Msa0816730:intron | 40.0% |
| GACAAATCATCAATGCCAGT+AGG | - | chr5_3:51311723-51311742 | None:intergenic | 40.0% | |
| TGAAGCAACAGTTGCAGTTT+CGG | - | chr5_3:51311808-51311827 | None:intergenic | 40.0% | |
| GTGATGACTATAATAGGAGG+TGG | + | chr5_3:51312004-51312023 | Msa0816730:CDS | 40.0% | |
| ! | GCATGTTGGTGTTCTTGTTA+AGG | + | chr5_3:51312030-51312049 | Msa0816730:CDS | 40.0% |
| AGATAAACTCGGTTTCGTGT+TGG | + | chr5_3:51312117-51312136 | Msa0816730:CDS | 40.0% | |
| CTCTTAGCTTAGACTCTGTT+TGG | + | chr5_3:51312238-51312257 | Msa0816730:intron | 40.0% | |
| TCAAATAAGGCAATCCGAAC+AGG | + | chr5_3:51312496-51312515 | Msa0816730:intron | 40.0% | |
| ATTGCCATTAAAGGCCTGTT+CGG | - | chr5_3:51312513-51312532 | None:intergenic | 40.0% | |
| GCAATAAACTAAGTGGCTTG+TGG | + | chr5_3:51312528-51312547 | Msa0816730:intron | 40.0% | |
| !! | AACTAAGTGGCTTGTGGTTT+TGG | + | chr5_3:51312534-51312553 | Msa0816730:intron | 40.0% |
| TTGGATTTGTCTAGGTCTCT+AGG | + | chr5_3:51312640-51312659 | Msa0816730:intron | 40.0% | |
| GAAATCCCTGAATCTATGGA+GGG | - | chr5_3:51312670-51312689 | None:intergenic | 40.0% | |
| AGAAATCCCTGAATCTATGG+AGG | - | chr5_3:51312671-51312690 | None:intergenic | 40.0% | |
| TCCTCCTTGCTTACAAATAC+TGG | + | chr5_3:51312706-51312725 | Msa0816730:CDS | 40.0% | |
| TCCTTGCTTACAAATACTGG+CGG | + | chr5_3:51312709-51312728 | Msa0816730:CDS | 40.0% | |
| ! | ATCAGCTTCACCGTCTTTTT+AGG | + | chr5_3:51312986-51313005 | Msa0816730:intron | 40.0% |
| ACTTTCGCTGCCTAAAAAGA+CGG | - | chr5_3:51312999-51313018 | None:intergenic | 40.0% | |
| !! | TCTTTTTAGGCAGCGAAAGT+GGG | + | chr5_3:51312999-51313018 | Msa0816730:intron | 40.0% |
| !!! | GTTTTGAGAATGCAGACCAT+AGG | + | chr5_3:51313072-51313091 | Msa0816730:CDS | 40.0% |
| TGGTACGATATTGCCTTTAG+AGG | + | chr5_3:51313215-51313234 | Msa0816730:intron | 40.0% | |
| TGTCCCATCAAAACCTCTAA+AGG | - | chr5_3:51313231-51313250 | None:intergenic | 40.0% | |
| ! | AATATCAGACTCGGTACTTG+CGG | + | chr5_3:51313613-51313632 | Msa0816730:intron | 40.0% |
| TACAACGTATAGCTAATGGC+CGG | - | chr5_3:51313665-51313684 | None:intergenic | 40.0% | |
| !!! | TGAACTTTTGGTTTGTGTGC+AGG | + | chr5_3:51313714-51313733 | Msa0816730:intron | 40.0% |
| ! | TGGTTTGTGTGCAGGATAAA+TGG | + | chr5_3:51313722-51313741 | Msa0816730:intron | 40.0% |
| !! | TTTTGGCTGCACATGCTTAT+TGG | + | chr5_3:51313824-51313843 | Msa0816730:CDS | 40.0% |
| !! | ACGCTGTTGACTTGTAACTA+TGG | + | chr5_3:51313926-51313945 | Msa0816730:three_prime_UTR | 40.0% |
| !! | TCTCCTTGCTTTTCTTCAGT+TGG | + | chr5_3:51314280-51314299 | Msa0816730:three_prime_UTR | 40.0% |
| ! | TGGAATTTGAGATCCGATCG+TGG | + | chr5_3:51309675-51309694 | Msa0816730:intron | 45.0% |
| GAGATCCGATCGTGGAAATT+AGG | + | chr5_3:51309683-51309702 | Msa0816730:intron | 45.0% | |
| CATGGCCTAATTTCCACGAT+CGG | - | chr5_3:51309691-51309710 | None:intergenic | 45.0% | |
| !! | GGCCATGTTTGTTGTGAAAC+TGG | + | chr5_3:51309704-51309723 | Msa0816730:intron | 45.0% |
| CTTGGACATCTAGGTACCTT+AGG | - | chr5_3:51310426-51310445 | None:intergenic | 45.0% | |
| TTCAAGAAACCAGTCGAGGA+TGG | + | chr5_3:51310551-51310570 | Msa0816730:CDS | 45.0% | |
| ATCAGATGCATTGCTAGAGG+TGG | - | chr5_3:51310642-51310661 | None:intergenic | 45.0% | |
| ! | GAGAAACATCTTGAGAGTGC+TGG | + | chr5_3:51310719-51310738 | Msa0816730:CDS | 45.0% |
| CCTTCTTTAGCCAACTTGAG+CGG | + | chr5_3:51310911-51310930 | Msa0816730:CDS | 45.0% | |
| !! | CTTCCTTTTCAAGGAATGGG+AGG | + | chr5_3:51310975-51310994 | Msa0816730:CDS | 45.0% |
| GGGAGGAATGCTAGTAAGTT+AGG | + | chr5_3:51310992-51311011 | Msa0816730:CDS | 45.0% | |
| CAAAGTTTGCACCAAACCGA+AGG | + | chr5_3:51311051-51311070 | Msa0816730:CDS | 45.0% | |
| AGGTCTAAAAGCCTTCGGTT+TGG | - | chr5_3:51311065-51311084 | None:intergenic | 45.0% | |
| CGTGAAGGTCTAAAAGCCTT+CGG | - | chr5_3:51311070-51311089 | None:intergenic | 45.0% | |
| TTGCGTGCAATGTATCGTGA+AGG | - | chr5_3:51311085-51311104 | None:intergenic | 45.0% | |
| GGACTTCCAATTCCAAACAC+TGG | + | chr5_3:51311122-51311141 | Msa0816730:CDS | 45.0% | |
| GTGAGAGGAACAGTAAGAAC+AGG | - | chr5_3:51311303-51311322 | None:intergenic | 45.0% | |
| AGAAAAGCTGTCTTGGTGAG+AGG | - | chr5_3:51311318-51311337 | None:intergenic | 45.0% | |
| GGTGCAAAGAAAAGCTGTCT+TGG | - | chr5_3:51311325-51311344 | None:intergenic | 45.0% | |
| GTCTTCCTCTTATGACTCGA+GGG | - | chr5_3:51311460-51311479 | None:intergenic | 45.0% | |
| AGTCTTCCTCTTATGACTCG+AGG | - | chr5_3:51311461-51311480 | None:intergenic | 45.0% | |
| AGTGTCACACTCTGTTGAAG+AGG | + | chr5_3:51311503-51311522 | Msa0816730:CDS | 45.0% | |
| ! | GAACTTTTGCAGATGAGCCA+CGG | - | chr5_3:51311627-51311646 | None:intergenic | 45.0% |
| GCGAAACTTTACTGTACGCA+AGG | - | chr5_3:51311745-51311764 | None:intergenic | 45.0% | |
| AGTTTCGCATCGAGTCATTC+AGG | + | chr5_3:51311757-51311776 | Msa0816730:CDS | 45.0% | |
| GGAACGTCAACGTAAAGTTC+TGG | - | chr5_3:51311786-51311805 | None:intergenic | 45.0% | |
| GAAGCAACAGTTGCAGTTTC+GGG | - | chr5_3:51311807-51311826 | None:intergenic | 45.0% | |
| ATAGAGGACAGTTATGGAGG+CGG | + | chr5_3:51311982-51312001 | Msa0816730:intron | 45.0% | |
| GAGGCGGTGATGACTATAAT+AGG | + | chr5_3:51311998-51312017 | Msa0816730:CDS | 45.0% | |
| GCGGTGATGACTATAATAGG+AGG | + | chr5_3:51312001-51312020 | Msa0816730:CDS | 45.0% | |
| AACAGAACTCTTCGTCAGAC+TGG | + | chr5_3:51312073-51312092 | Msa0816730:CDS | 45.0% | |
| TGAGATGCTACATGGTGAGA+AGG | - | chr5_3:51312187-51312206 | None:intergenic | 45.0% | |
| CAATCCGAACAGGCCTTTAA+TGG | + | chr5_3:51312506-51312525 | Msa0816730:intron | 45.0% | |
| GAACTCCCTCCATAGATTCA+GGG | + | chr5_3:51312662-51312681 | Msa0816730:CDS | 45.0% | |
| AGGGATTTCTGTTGCCAAAC+AGG | + | chr5_3:51312681-51312700 | Msa0816730:CDS | 45.0% | |
| GGGATTTCTGTTGCCAAACA+GGG | + | chr5_3:51312682-51312701 | Msa0816730:CDS | 45.0% | |
| GCCAGTATTTGTAAGCAAGG+AGG | - | chr5_3:51312710-51312729 | None:intergenic | 45.0% | |
| ACCGCCAGTATTTGTAAGCA+AGG | - | chr5_3:51312713-51312732 | None:intergenic | 45.0% | |
| ! | CAAGGGAAGAAGCTGATTCA+TGG | - | chr5_3:51312753-51312772 | None:intergenic | 45.0% |
| TGTTCCAGCTCATAGTACTG+AGG | + | chr5_3:51312822-51312841 | Msa0816730:CDS | 45.0% | |
| AATGCCTCAGTACTATGAGC+TGG | - | chr5_3:51312829-51312848 | None:intergenic | 45.0% | |
| TGGTCCAGTGTTCTGATTCA+CGG | - | chr5_3:51312863-51312882 | None:intergenic | 45.0% | |
| AGACACAGAAAATGGTCTCC+TGG | - | chr5_3:51312908-51312927 | None:intergenic | 45.0% | |
| AGCACTTGTTCATGCAGTTG+AGG | + | chr5_3:51312936-51312955 | Msa0816730:CDS | 45.0% | |
| GTTCATGCAGTTGAGGAAGT+TGG | + | chr5_3:51312943-51312962 | Msa0816730:CDS | 45.0% | |
| TTGAGGAAGTTGGAACTGGA+AGG | + | chr5_3:51312953-51312972 | Msa0816730:CDS | 45.0% | |
| !! | GTTGGAACTGGAAGGTACTA+TGG | + | chr5_3:51312961-51312980 | Msa0816730:intron | 45.0% |
| !! | GTCTTTTTAGGCAGCGAAAG+TGG | + | chr5_3:51312998-51313017 | Msa0816730:intron | 45.0% |
| ATCTCTCCTCAACAAAGGAG+AGG | + | chr5_3:51313769-51313788 | Msa0816730:CDS | 45.0% | |
| TTCCTCAGGAGCTATTGGAT+AGG | + | chr5_3:51313800-51313819 | Msa0816730:CDS | 45.0% | |
| TCCTCAGGAGCTATTGGATA+GGG | + | chr5_3:51313801-51313820 | Msa0816730:CDS | 45.0% | |
| ! | GGAGCTATTGGATAGGGTTT+TGG | + | chr5_3:51313807-51313826 | Msa0816730:CDS | 45.0% |
| TTGATGCTTGACATGCTGCT+TGG | - | chr5_3:51313863-51313882 | None:intergenic | 45.0% | |
| CACAAGTGGTTGGACAACAT+TGG | - | chr5_3:51313887-51313906 | None:intergenic | 45.0% | |
| GGCCAGCAAAGAATTTGGTA+AGG | - | chr5_3:51313995-51314014 | None:intergenic | 45.0% | |
| !!! | TTAATTAATTAGTTTAAAAT+TGG | + | chr5_3:51310042-51310061 | Msa0816730:intron | 5.0% |
| TGCGTTCAAGAAACCAGTCG+AGG | + | chr5_3:51310547-51310566 | Msa0816730:CDS | 50.0% | |
| TTTAGCCGGTGAGTTGCTGA+AGG | + | chr5_3:51310604-51310623 | Msa0816730:CDS | 50.0% | |
| ACTCTCCTTCAGCAACTCAC+CGG | - | chr5_3:51310612-51310631 | None:intergenic | 50.0% | |
| !! | CCGCTCAAGTTGGCTAAAGA+AGG | - | chr5_3:51310914-51310933 | None:intergenic | 50.0% |
| TGGAGCAACCTTCCAGTGTT+TGG | - | chr5_3:51311137-51311156 | None:intergenic | 50.0% | |
| AGGGGTTCGATGCTAACTCA+TGG | + | chr5_3:51311541-51311560 | Msa0816730:CDS | 50.0% | |
| GGTTCGATGCTAACTCATGG+TGG | + | chr5_3:51311544-51311563 | Msa0816730:CDS | 50.0% | |
| TCGATGCTAACTCATGGTGG+AGG | + | chr5_3:51311547-51311566 | Msa0816730:CDS | 50.0% | |
| ATAGGAGGTGGAGTGCATGT+TGG | + | chr5_3:51312016-51312035 | Msa0816730:CDS | 50.0% | |
| GGAGAAGCTTGAGAAGAGCT+AGG | - | chr5_3:51312145-51312164 | None:intergenic | 50.0% | |
| GCTTCTCCAGTTGTTTGTGC+TGG | + | chr5_3:51312157-51312176 | Msa0816730:CDS | 50.0% | |
| GGATCACCAGCACAAACAAC+TGG | - | chr5_3:51312166-51312185 | None:intergenic | 50.0% | |
| TGGTAGGCTGAGATGCTACA+TGG | - | chr5_3:51312195-51312214 | None:intergenic | 50.0% | |
| ATGTAGCATCTCAGCCTACC+AGG | + | chr5_3:51312194-51312213 | Msa0816730:CDS | 50.0% | |
| TCAACTTTCGCTCACCTGGT+AGG | - | chr5_3:51312211-51312230 | None:intergenic | 50.0% | |
| CTGTTCAACTTTCGCTCACC+TGG | - | chr5_3:51312215-51312234 | None:intergenic | 50.0% | |
| GGAACTCCCTCCATAGATTC+AGG | + | chr5_3:51312661-51312680 | Msa0816730:CDS | 50.0% | |
| AAGCAAGGAGGAACCCTGTT+TGG | - | chr5_3:51312698-51312717 | None:intergenic | 50.0% | |
| TGGAACAGAAACTAGCGCTC+CGG | - | chr5_3:51312809-51312828 | None:intergenic | 50.0% | |
| GTTCCCGTGAATCAGAACAC+TGG | + | chr5_3:51312856-51312875 | Msa0816730:CDS | 50.0% | |
| GGTCCAGTGTTCTGATTCAC+GGG | - | chr5_3:51312862-51312881 | None:intergenic | 50.0% | |
| GCAGTTGAGGAAGTTGGAAC+TGG | + | chr5_3:51312949-51312968 | Msa0816730:CDS | 50.0% | |
| TCCAATAGCTCCTGAGGAAC+TGG | - | chr5_3:51313799-51313818 | None:intergenic | 50.0% | |
| ACCCTATCCAATAGCTCCTG+AGG | - | chr5_3:51313805-51313824 | None:intergenic | 50.0% | |
| ! | TGACATGCTGCTTGGATTGG+TGG | - | chr5_3:51313855-51313874 | None:intergenic | 50.0% |
| ! | GCTTGACATGCTGCTTGGAT+TGG | - | chr5_3:51313858-51313877 | None:intergenic | 50.0% |
| CAGGGACTATCAGGTCCCTA+AGG | + | chr5_3:51310407-51310426 | Msa0816730:CDS | 55.0% | |
| CTGAACTGTCAGCCTCGTGA+TGG | - | chr5_3:51310862-51310881 | None:intergenic | 55.0% | |
| CATCACGAGGCTGACAGTTC+AGG | + | chr5_3:51310860-51310879 | Msa0816730:CDS | 55.0% | |
| TGCGACCCTCGAGTCATAAG+AGG | + | chr5_3:51311452-51311471 | Msa0816730:CDS | 55.0% | |
| GGTTCGACGCTGTACAAGCT+CGG | - | chr5_3:51312887-51312906 | None:intergenic | 55.0% | |
| ! | AGCTTGTACAGCGTCGAACC+AGG | + | chr5_3:51312887-51312906 | Msa0816730:CDS | 55.0% |
| CATTCACACACCCTGCACAC+CGG | + | chr5_3:51313643-51313662 | Msa0816730:intron | 55.0% | |
| TAGCTAATGGCCGGTGTGCA+GGG | - | chr5_3:51313656-51313675 | None:intergenic | 55.0% | |
| ATAGCTAATGGCCGGTGTGC+AGG | - | chr5_3:51313657-51313676 | None:intergenic | 55.0% | |
| GGCTGTCCTCTCCTTTGTTG+AGG | - | chr5_3:51313778-51313797 | None:intergenic | 55.0% | |
| GCCAGTTCCTCAGGAGCTAT+TGG | + | chr5_3:51313795-51313814 | Msa0816730:CDS | 55.0% | |
| CAAGAGTGGCCATCCTCGAC+TGG | - | chr5_3:51310563-51310582 | None:intergenic | 60.0% | |
| CGACGCTGTACAAGCTCGGA+TGG | - | chr5_3:51312883-51312902 | None:intergenic | 60.0% | |
| GAGAGGACAGCCAGTTCCTC+AGG | + | chr5_3:51313786-51313805 | Msa0816730:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 51309391 | 51314350 | 51309391 | ID=Msa0816730;Name=Msa0816730 |
| chr5_3 | mRNA | 51309391 | 51314350 | 51309391 | ID=Msa0816730-mRNA-1;Parent=Msa0816730;Name=Msa0816730-mRNA-1;_AED=0.12;_eAED=0.12;_QI=261|0.8|0.81|1|0.8|0.63|11|335|637 |
| chr5_3 | exon | 51309391 | 51309588 | 51309391 | ID=Msa0816730-mRNA-1:exon:15443;Parent=Msa0816730-mRNA-1 |
| chr5_3 | exon | 51310312 | 51310455 | 51310312 | ID=Msa0816730-mRNA-1:exon:15444;Parent=Msa0816730-mRNA-1 |
| chr5_3 | exon | 51310539 | 51311206 | 51310539 | ID=Msa0816730-mRNA-1:exon:15445;Parent=Msa0816730-mRNA-1 |
| chr5_3 | exon | 51311290 | 51311354 | 51311290 | ID=Msa0816730-mRNA-1:exon:15446;Parent=Msa0816730-mRNA-1 |
| chr5_3 | exon | 51311443 | 51311667 | 51311443 | ID=Msa0816730-mRNA-1:exon:15447;Parent=Msa0816730-mRNA-1 |
| chr5_3 | exon | 51311754 | 51311833 | 51311754 | ID=Msa0816730-mRNA-1:exon:15448;Parent=Msa0816730-mRNA-1 |
| chr5_3 | exon | 51311986 | 51312215 | 51311986 | ID=Msa0816730-mRNA-1:exon:15449;Parent=Msa0816730-mRNA-1 |
| chr5_3 | exon | 51312654 | 51312974 | 51312654 | ID=Msa0816730-mRNA-1:exon:15450;Parent=Msa0816730-mRNA-1 |
| chr5_3 | exon | 51313049 | 51313112 | 51313049 | ID=Msa0816730-mRNA-1:exon:15451;Parent=Msa0816730-mRNA-1 |
| chr5_3 | exon | 51313736 | 51314110 | 51313736 | ID=Msa0816730-mRNA-1:exon:15452;Parent=Msa0816730-mRNA-1 |
| chr5_3 | exon | 51314211 | 51314350 | 51314211 | ID=Msa0816730-mRNA-1:exon:15453;Parent=Msa0816730-mRNA-1 |
| chr5_3 | five_prime_UTR | 51309391 | 51309588 | 51309391 | ID=Msa0816730-mRNA-1:five_prime_utr;Parent=Msa0816730-mRNA-1 |
| chr5_3 | five_prime_UTR | 51310312 | 51310374 | 51310312 | ID=Msa0816730-mRNA-1:five_prime_utr;Parent=Msa0816730-mRNA-1 |
| chr5_3 | CDS | 51310375 | 51310455 | 51310375 | ID=Msa0816730-mRNA-1:cds;Parent=Msa0816730-mRNA-1 |
| chr5_3 | CDS | 51310539 | 51311206 | 51310539 | ID=Msa0816730-mRNA-1:cds;Parent=Msa0816730-mRNA-1 |
| chr5_3 | CDS | 51311290 | 51311354 | 51311290 | ID=Msa0816730-mRNA-1:cds;Parent=Msa0816730-mRNA-1 |
| chr5_3 | CDS | 51311443 | 51311667 | 51311443 | ID=Msa0816730-mRNA-1:cds;Parent=Msa0816730-mRNA-1 |
| chr5_3 | CDS | 51311754 | 51311833 | 51311754 | ID=Msa0816730-mRNA-1:cds;Parent=Msa0816730-mRNA-1 |
| chr5_3 | CDS | 51311986 | 51312215 | 51311986 | ID=Msa0816730-mRNA-1:cds;Parent=Msa0816730-mRNA-1 |
| chr5_3 | CDS | 51312654 | 51312974 | 51312654 | ID=Msa0816730-mRNA-1:cds;Parent=Msa0816730-mRNA-1 |
| chr5_3 | CDS | 51313049 | 51313112 | 51313049 | ID=Msa0816730-mRNA-1:cds;Parent=Msa0816730-mRNA-1 |
| chr5_3 | CDS | 51313736 | 51313915 | 51313736 | ID=Msa0816730-mRNA-1:cds;Parent=Msa0816730-mRNA-1 |
| chr5_3 | three_prime_UTR | 51313916 | 51314110 | 51313916 | ID=Msa0816730-mRNA-1:three_prime_utr;Parent=Msa0816730-mRNA-1 |
| chr5_3 | three_prime_UTR | 51314211 | 51314350 | 51314211 | ID=Msa0816730-mRNA-1:three_prime_utr;Parent=Msa0816730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
