Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748170 | sp|Q6AYB3|ISY1_RAT | 48.344 | 302 | 135 | 7 | 1 | 300 | 1 | 283 | 1.83e-79 | 245 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748170 | G7K4N4 | 99.340 | 303 | 2 | 0 | 1 | 303 | 1 | 303 | 0.0 | 601 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003640 | Msa0748170 | 0.801767 | 7.710017e-49 | -8.615850e-47 |
| Msa0007440 | Msa0748170 | 0.848577 | 5.611090e-60 | -8.615850e-47 |
| Msa0010490 | Msa0748170 | 0.827206 | 1.778038e-54 | -8.615850e-47 |
| Msa0010500 | Msa0748170 | 0.811902 | 5.548447e-51 | -8.615850e-47 |
| Msa0011960 | Msa0748170 | 0.805696 | 1.178508e-49 | -8.615850e-47 |
| Msa0020390 | Msa0748170 | 0.810186 | 1.306198e-50 | -8.615850e-47 |
| Msa0023000 | Msa0748170 | 0.800998 | 1.107623e-48 | -8.615850e-47 |
| Msa0029260 | Msa0748170 | 0.825513 | 4.498735e-54 | -8.615850e-47 |
| Msa0033110 | Msa0748170 | 0.852959 | 3.277865e-61 | -8.615850e-47 |
| Msa0033260 | Msa0748170 | 0.845889 | 3.064569e-59 | -8.615850e-47 |
| Msa0036540 | Msa0748170 | 0.805508 | 1.290750e-49 | -8.615850e-47 |
| Msa0037540 | Msa0748170 | -0.826699 | 2.350314e-54 | -8.615850e-47 |
| Msa0037590 | Msa0748170 | -0.825478 | 4.586098e-54 | -8.615850e-47 |
| Msa0043660 | Msa0748170 | 0.808499 | 3.006070e-50 | -8.615850e-47 |
| Msa0047160 | Msa0748170 | 0.812990 | 3.209836e-51 | -8.615850e-47 |
| Msa0054750 | Msa0748170 | 0.811030 | 8.584018e-51 | -8.615850e-47 |
| Msa0056030 | Msa0748170 | 0.811203 | 7.873174e-51 | -8.615850e-47 |
| Msa0058300 | Msa0748170 | 0.815459 | 9.145085e-52 | -8.615850e-47 |
| Msa0059040 | Msa0748170 | 0.828638 | 8.042972e-55 | -8.615850e-47 |
| Msa0059110 | Msa0748170 | 0.816167 | 6.359226e-52 | -8.615850e-47 |
| Msa0059950 | Msa0748170 | 0.821643 | 3.619733e-53 | -8.615850e-47 |
| Msa0071250 | Msa0748170 | 0.819295 | 1.252145e-52 | -8.615850e-47 |
| Msa0072420 | Msa0748170 | 0.806617 | 7.542172e-50 | -8.615850e-47 |
| Msa0075500 | Msa0748170 | 0.809061 | 2.279674e-50 | -8.615850e-47 |
| Msa0089820 | Msa0748170 | 0.809036 | 2.307337e-50 | -8.615850e-47 |
| Msa0090520 | Msa0748170 | 0.808407 | 3.145011e-50 | -8.615850e-47 |
| Msa0091410 | Msa0748170 | 0.848456 | 6.060706e-60 | -8.615850e-47 |
| Msa0094470 | Msa0748170 | 0.804951 | 1.688409e-49 | -8.615850e-47 |
| Msa0095360 | Msa0748170 | 0.821984 | 3.019476e-53 | -8.615850e-47 |
| Msa0095770 | Msa0748170 | 0.807701 | 4.444804e-50 | -8.615850e-47 |
| Msa0100740 | Msa0748170 | 0.811984 | 5.325898e-51 | -8.615850e-47 |
| Msa0112770 | Msa0748170 | 0.801451 | 8.950769e-49 | -8.615850e-47 |
| Msa0115190 | Msa0748170 | 0.830918 | 2.240468e-55 | -8.615850e-47 |
| Msa0118540 | Msa0748170 | 0.823220 | 1.557572e-53 | -8.615850e-47 |
| Msa0603570 | Msa0748170 | 0.817351 | 3.450420e-52 | -8.615850e-47 |
| Msa0605000 | Msa0748170 | 0.810055 | 1.394090e-50 | -8.615850e-47 |
| Msa0618930 | Msa0748170 | 0.821609 | 3.686128e-53 | -8.615850e-47 |
| Msa0631350 | Msa0748170 | 0.836090 | 1.146911e-56 | -8.615850e-47 |
| Msa0634890 | Msa0748170 | 0.849893 | 2.413062e-60 | -8.615850e-47 |
| Msa0642970 | Msa0748170 | 0.802412 | 5.680262e-49 | -8.615850e-47 |
| Msa0643320 | Msa0748170 | 0.822384 | 2.437997e-53 | -8.615850e-47 |
| Msa0643560 | Msa0748170 | 0.809388 | 1.939732e-50 | -8.615850e-47 |
| Msa0661300 | Msa0748170 | 0.817600 | 3.031355e-52 | -8.615850e-47 |
| Msa0672550 | Msa0748170 | 0.802351 | 5.845496e-49 | -8.615850e-47 |
| Msa0679360 | Msa0748170 | 0.809852 | 1.541505e-50 | -8.615850e-47 |
| Msa0682680 | Msa0748170 | 0.809554 | 1.786942e-50 | -8.615850e-47 |
| Msa0683140 | Msa0748170 | 0.828941 | 6.794153e-55 | -8.615850e-47 |
| Msa0683600 | Msa0748170 | 0.832425 | 9.520816e-56 | -8.615850e-47 |
| Msa0685140 | Msa0748170 | 0.814412 | 1.560769e-51 | -8.615850e-47 |
| Msa0691290 | Msa0748170 | 0.805602 | 1.232941e-49 | -8.615850e-47 |
| Msa0698800 | Msa0748170 | 0.824895 | 6.299037e-54 | -8.615850e-47 |
| Msa0703910 | Msa0748170 | 0.800591 | 1.341525e-48 | -8.615850e-47 |
| Msa0711780 | Msa0748170 | 0.807224 | 5.612007e-50 | -8.615850e-47 |
| Msa0719180 | Msa0748170 | 0.806933 | 6.466168e-50 | -8.615850e-47 |
| Msa0719420 | Msa0748170 | 0.801332 | 9.466389e-49 | -8.615850e-47 |
| Msa0741440 | Msa0748170 | 0.813297 | 2.748904e-51 | -8.615850e-47 |
| Msa0746170 | Msa0748170 | 0.811423 | 7.052039e-51 | -8.615850e-47 |
| Msa0746210 | Msa0748170 | 0.816566 | 5.176931e-52 | -8.615850e-47 |
| Msa0748170 | Msa0753140 | 0.803935 | 2.748406e-49 | -8.615850e-47 |
| Msa0748170 | Msa0763330 | 0.804987 | 1.658705e-49 | -8.615850e-47 |
| Msa0748170 | Msa0772480 | 0.818369 | 2.032388e-52 | -8.615850e-47 |
| Msa0748170 | Msa0786270 | 0.808422 | 3.121378e-50 | -8.615850e-47 |
| Msa0748170 | Msa0789680 | 0.801572 | 8.450731e-49 | -8.615850e-47 |
| Msa0748170 | Msa0794670 | 0.808545 | 2.937764e-50 | -8.615850e-47 |
| Msa0748170 | Msa0798440 | 0.828307 | 9.670191e-55 | -8.615850e-47 |
| Msa0748170 | Msa0800370 | 0.830454 | 2.910838e-55 | -8.615850e-47 |
| Msa0748170 | Msa0819060 | 0.805891 | 1.072591e-49 | -8.615850e-47 |
| Msa0748170 | Msa0822500 | 0.807066 | 6.061615e-50 | -8.615850e-47 |
| Msa0748170 | Msa0823090 | 0.801683 | 8.019839e-49 | -8.615850e-47 |
| Msa0748170 | Msa0830540 | 0.839637 | 1.406388e-57 | -8.615850e-47 |
| Msa0748170 | Msa0833190 | -0.808986 | 2.365389e-50 | -8.615850e-47 |
| Msa0748170 | Msa0860030 | -0.800291 | 1.543720e-48 | -8.615850e-47 |
| Msa0748170 | Msa0861570 | 0.803961 | 2.715070e-49 | -8.615850e-47 |
| Msa0748170 | Msa0865030 | 0.804782 | 1.830959e-49 | -8.615850e-47 |
| Msa0748170 | Msa0880730 | 0.807497 | 4.911027e-50 | -8.615850e-47 |
| Msa0748170 | Msa0887250 | 0.864086 | 1.565641e-64 | -8.615850e-47 |
| Msa0748170 | Msa0900110 | 0.805370 | 1.379221e-49 | -8.615850e-47 |
| Msa0748170 | Msa0913240 | 0.801758 | 7.740829e-49 | -8.615850e-47 |
| Msa0748170 | Msa0925770 | 0.810791 | 9.668921e-51 | -8.615850e-47 |
| Msa0748170 | Msa0932570 | 0.801552 | 8.534115e-49 | -8.615850e-47 |
| Msa0748170 | Msa0944200 | 0.813075 | 3.074756e-51 | -8.615850e-47 |
| Msa0748170 | Msa0944610 | 0.819111 | 1.378567e-52 | -8.615850e-47 |
| Msa0748170 | Msa0945440 | 0.808583 | 2.884501e-50 | -8.615850e-47 |
| Msa0748170 | Msa0958000 | 0.810292 | 1.239508e-50 | -8.615850e-47 |
| Msa0748170 | Msa0966010 | 0.811349 | 7.317672e-51 | -8.615850e-47 |
| Msa0748170 | Msa0970530 | 0.807786 | 4.263708e-50 | -8.615850e-47 |
| Msa0748170 | Msa0970600 | 0.832575 | 8.740229e-56 | -8.615850e-47 |
| Msa0748170 | Msa0974950 | 0.808642 | 2.800871e-50 | -8.615850e-47 |
| Msa0748170 | Msa0981840 | 0.806975 | 6.335810e-50 | -8.615850e-47 |
| Msa0748170 | Msa0987370 | 0.840475 | 8.504339e-58 | -8.615850e-47 |
| Msa0748170 | Msa0989540 | 0.806045 | 9.953904e-50 | -8.615850e-47 |
| Msa0748170 | Msa0994370 | 0.826402 | 2.767569e-54 | -8.615850e-47 |
| Msa0748170 | Msa1025080 | 0.800176 | 1.629362e-48 | -8.615850e-47 |
| Msa0748170 | Msa1029050 | 0.807170 | 5.760447e-50 | -8.615850e-47 |
| Msa0748170 | Msa1064250 | 0.802893 | 4.519699e-49 | -8.615850e-47 |
| Msa0748170 | Msa1071320 | 0.804654 | 1.947600e-49 | -8.615850e-47 |
| Msa0748170 | Msa1077030 | 0.819742 | 9.899141e-53 | -8.615850e-47 |
| Msa0748170 | Msa1081790 | -0.817128 | 3.872739e-52 | -8.615850e-47 |
| Msa0748170 | Msa1081930 | 0.832768 | 7.828935e-56 | -8.615850e-47 |
| Msa0748170 | Msa1088290 | 0.801539 | 8.585003e-49 | -8.615850e-47 |
| Msa0748170 | Msa1089320 | 0.813182 | 2.913807e-51 | -8.615850e-47 |
| Msa0748170 | Msa1091940 | 0.813852 | 2.075563e-51 | -8.615850e-47 |
| Msa0748170 | Msa1104210 | 0.810229 | 1.278484e-50 | -8.615850e-47 |
| Msa0748170 | Msa1109680 | 0.815445 | 9.212698e-52 | -8.615850e-47 |
| Msa0748170 | Msa1126830 | 0.832643 | 8.410239e-56 | -8.615850e-47 |
| Msa0748170 | Msa1133230 | 0.855096 | 7.931925e-62 | -8.615850e-47 |
| Msa0748170 | Msa1133250 | 0.845345 | 4.302736e-59 | -8.615850e-47 |
| Msa0748170 | Msa1140230 | 0.813585 | 2.375671e-51 | -8.615850e-47 |
| Msa0748170 | Msa1158640 | -0.818471 | 1.926744e-52 | -8.615850e-47 |
| Msa0748170 | Msa1160590 | 0.848496 | 5.905359e-60 | -8.615850e-47 |
| Msa0748170 | Msa1165780 | 0.852360 | 4.858513e-61 | -8.615850e-47 |
| Msa0748170 | Msa1166090 | -0.830954 | 2.195495e-55 | -8.615850e-47 |
| Msa0748170 | Msa1176710 | 0.830624 | 2.643839e-55 | -8.615850e-47 |
| Msa0748170 | Msa1176720 | 0.824109 | 9.645949e-54 | -8.615850e-47 |
| Msa0748170 | Msa1181250 | 0.835941 | 1.251218e-56 | -8.615850e-47 |
| Msa0748170 | Msa1181330 | 0.835421 | 1.694291e-56 | -8.615850e-47 |
| Msa0748170 | Msa1188600 | -0.800778 | 1.228788e-48 | -8.615850e-47 |
| Msa0748170 | Msa1207310 | 0.806208 | 9.197489e-50 | -8.615850e-47 |
| Msa0748170 | Msa1209200 | 0.844538 | 7.106845e-59 | -8.615850e-47 |
| Msa0748170 | Msa1209260 | 0.833391 | 5.480004e-56 | -8.615850e-47 |
| Msa0748170 | Msa1209760 | 0.817956 | 2.519258e-52 | -8.615850e-47 |
| Msa0748170 | Msa1218500 | 0.822538 | 2.244836e-53 | -8.615850e-47 |
| Msa0748170 | Msa1226610 | 0.801962 | 7.029762e-49 | -8.615850e-47 |
| Msa0748170 | Msa1231840 | 0.825631 | 4.220204e-54 | -8.615850e-47 |
| Msa0748170 | Msa1254730 | 0.820047 | 8.428688e-53 | -8.615850e-47 |
| Msa0748170 | Msa1259060 | 0.801361 | 9.338036e-49 | -8.615850e-47 |
| Msa0748170 | Msa1261680 | -0.800734 | 1.254507e-48 | -8.615850e-47 |
| Msa0748170 | Msa1262720 | 0.803878 | 2.824573e-49 | -8.615850e-47 |
| Msa0748170 | Msa1262890 | 0.806977 | 6.329607e-50 | -8.615850e-47 |
| Msa0748170 | Msa1264210 | 0.810525 | 1.103612e-50 | -8.615850e-47 |
| Msa0748170 | Msa1265630 | 0.815403 | 9.410428e-52 | -8.615850e-47 |
| Msa0748170 | Msa1270660 | 0.805574 | 1.250288e-49 | -8.615850e-47 |
| Msa0748170 | Msa1274560 | 0.818795 | 1.626459e-52 | -8.615850e-47 |
| Msa0748170 | Msa1296830 | 0.805930 | 1.052543e-49 | -8.615850e-47 |
| Msa0748170 | Msa1302380 | 0.803367 | 3.606399e-49 | -8.615850e-47 |
| Msa0748170 | Msa1307180 | 0.800567 | 1.356782e-48 | -8.615850e-47 |
| Msa0748170 | Msa1316360 | 0.816359 | 5.758580e-52 | -8.615850e-47 |
| Msa0748170 | Msa1332590 | 0.827679 | 1.369183e-54 | -8.615850e-47 |
| Msa0748170 | Msa1334880 | 0.809182 | 2.146946e-50 | -8.615850e-47 |
| Msa0748170 | Msa1336560 | 0.830472 | 2.881054e-55 | -8.615850e-47 |
| Msa0748170 | Msa1351540 | 0.845410 | 4.133174e-59 | -8.615850e-47 |
| Msa0748170 | Msa1359630 | 0.812527 | 4.053020e-51 | -8.615850e-47 |
| Msa0748170 | Msa1362090 | 0.811548 | 6.627697e-51 | -8.615850e-47 |
| Msa0748170 | Msa1364210 | 0.814056 | 1.871199e-51 | -8.615850e-47 |
| Msa0748170 | Msa1386050 | 0.805632 | 1.215292e-49 | -8.615850e-47 |
| Msa0748170 | Msa1388860 | 0.833056 | 6.640049e-56 | -8.615850e-47 |
| Msa0748170 | Msa1392780 | 0.808259 | 3.381117e-50 | -8.615850e-47 |
| Msa0748170 | Msa1396400 | -0.830116 | 3.519471e-55 | -8.615850e-47 |
| Msa0748170 | Msa1400580 | 0.808167 | 3.538175e-50 | -8.615850e-47 |
| Msa0748170 | Msa1403340 | 0.817678 | 2.911296e-52 | -8.615850e-47 |
| Msa0748170 | Msa1419870 | 0.849803 | 2.557384e-60 | -8.615850e-47 |
| Msa0748170 | Msa1422810 | 0.813089 | 3.053439e-51 | -8.615850e-47 |
| Msa0748170 | Msa1428880 | 0.919965 | 2.325237e-87 | -8.615850e-47 |
| Msa0748170 | Msa1436520 | 0.855945 | 4.488157e-62 | -8.615850e-47 |
| Msa0748170 | Msa1437270 | 0.800250 | 1.574082e-48 | -8.615850e-47 |
| Msa0748170 | Msa1454680 | 0.826022 | 3.406910e-54 | -8.615850e-47 |
| Msa0748170 | Msa1457920 | 0.820463 | 6.770360e-53 | -8.615850e-47 |
| Msa0748170 | Msa1458810 | 0.827561 | 1.461940e-54 | -8.615850e-47 |
| Msa0748170 | Msa1459250 | 0.817614 | 3.009266e-52 | -8.615850e-47 |
| Msa0129190 | Msa0748170 | -0.819722 | 1.000267e-52 | -8.615850e-47 |
| Msa0137990 | Msa0748170 | 0.807919 | 3.994401e-50 | -8.615850e-47 |
| Msa0150300 | Msa0748170 | 0.801452 | 8.944396e-49 | -8.615850e-47 |
| Msa0159170 | Msa0748170 | 0.805325 | 1.409386e-49 | -8.615850e-47 |
| Msa0162130 | Msa0748170 | 0.821278 | 4.395201e-53 | -8.615850e-47 |
| Msa0169300 | Msa0748170 | 0.825570 | 4.361764e-54 | -8.615850e-47 |
| Msa0183850 | Msa0748170 | 0.802460 | 5.552732e-49 | -8.615850e-47 |
| Msa0188350 | Msa0748170 | 0.804653 | 1.948247e-49 | -8.615850e-47 |
| Msa0189300 | Msa0748170 | 0.831544 | 1.571867e-55 | -8.615850e-47 |
| Msa0189520 | Msa0748170 | 0.836505 | 8.994914e-57 | -8.615850e-47 |
| Msa0190120 | Msa0748170 | 0.828211 | 1.020044e-54 | -8.615850e-47 |
| Msa0202410 | Msa0748170 | 0.825153 | 5.476080e-54 | -8.615850e-47 |
| Msa0204960 | Msa0748170 | 0.810379 | 1.186758e-50 | -8.615850e-47 |
| Msa0207670 | Msa0748170 | 0.832623 | 8.507615e-56 | -8.615850e-47 |
| Msa0207700 | Msa0748170 | 0.831566 | 1.551975e-55 | -8.615850e-47 |
| Msa0209350 | Msa0748170 | 0.818960 | 1.491947e-52 | -8.615850e-47 |
| Msa0209500 | Msa0748170 | 0.830096 | 3.559546e-55 | -8.615850e-47 |
| Msa0229170 | Msa0748170 | 0.828287 | 9.777009e-55 | -8.615850e-47 |
| Msa0231660 | Msa0748170 | 0.826545 | 2.558415e-54 | -8.615850e-47 |
| Msa0365700 | Msa0748170 | 0.835281 | 1.838770e-56 | -8.615850e-47 |
| Msa0365860 | Msa0748170 | 0.833614 | 4.821245e-56 | -8.615850e-47 |
| Msa0366890 | Msa0748170 | 0.810638 | 1.043745e-50 | -8.615850e-47 |
| Msa0380100 | Msa0748170 | 0.826618 | 2.457598e-54 | -8.615850e-47 |
| Msa0385490 | Msa0748170 | 0.812989 | 3.211652e-51 | -8.615850e-47 |
| Msa0388700 | Msa0748170 | 0.836172 | 1.093637e-56 | -8.615850e-47 |
| Msa0397540 | Msa0748170 | 0.844298 | 8.246570e-59 | -8.615850e-47 |
| Msa0398660 | Msa0748170 | 0.808923 | 2.439187e-50 | -8.615850e-47 |
| Msa0412840 | Msa0748170 | 0.803472 | 3.429400e-49 | -8.615850e-47 |
| Msa0413530 | Msa0748170 | 0.823970 | 1.039400e-53 | -8.615850e-47 |
| Msa0414800 | Msa0748170 | 0.801978 | 6.976679e-49 | -8.615850e-47 |
| Msa0450930 | Msa0748170 | 0.801936 | 7.115237e-49 | -8.615850e-47 |
| Msa0451120 | Msa0748170 | 0.802339 | 5.879808e-49 | -8.615850e-47 |
| Msa0457510 | Msa0748170 | 0.821284 | 4.381807e-53 | -8.615850e-47 |
| Msa0458060 | Msa0748170 | 0.806085 | 9.761597e-50 | -8.615850e-47 |
| Msa0467220 | Msa0748170 | 0.800480 | 1.412843e-48 | -8.615850e-47 |
| Msa0481280 | Msa0748170 | 0.800752 | 1.243420e-48 | -8.615850e-47 |
| Msa0482130 | Msa0748170 | 0.847026 | 1.499952e-59 | -8.615850e-47 |
| Msa0256330 | Msa0748170 | 0.807923 | 3.987116e-50 | -8.615850e-47 |
| Msa0271360 | Msa0748170 | 0.823209 | 1.566708e-53 | -8.615850e-47 |
| Msa0271890 | Msa0748170 | 0.845596 | 3.680006e-59 | -8.615850e-47 |
| Msa0272450 | Msa0748170 | 0.805898 | 1.068709e-49 | -8.615850e-47 |
| Msa0275360 | Msa0748170 | 0.812731 | 3.658089e-51 | -8.615850e-47 |
| Msa0279240 | Msa0748170 | 0.819484 | 1.133414e-52 | -8.615850e-47 |
| Msa0281530 | Msa0748170 | 0.818652 | 1.753222e-52 | -8.615850e-47 |
| Msa0295330 | Msa0748170 | 0.813250 | 2.814984e-51 | -8.615850e-47 |
| Msa0309880 | Msa0748170 | 0.812126 | 4.959284e-51 | -8.615850e-47 |
| Msa0310860 | Msa0748170 | 0.841577 | 4.367735e-58 | -8.615850e-47 |
| Msa0318980 | Msa0748170 | 0.801099 | 1.056205e-48 | -8.615850e-47 |
| Msa0321690 | Msa0748170 | 0.801485 | 8.807260e-49 | -8.615850e-47 |
| Msa0322240 | Msa0748170 | 0.817221 | 3.690298e-52 | -8.615850e-47 |
| Msa0326480 | Msa0748170 | 0.802610 | 5.169836e-49 | -8.615850e-47 |
| Msa0335820 | Msa0748170 | -0.813213 | 2.867805e-51 | -8.615850e-47 |
| Msa0340380 | Msa0748170 | 0.807528 | 4.836935e-50 | -8.615850e-47 |
| Msa0345350 | Msa0748170 | 0.816226 | 6.169145e-52 | -8.615850e-47 |
| Msa0357900 | Msa0748170 | 0.841645 | 4.191067e-58 | -8.615850e-47 |
| Msa0358860 | Msa0748170 | 0.836706 | 7.994419e-57 | -8.615850e-47 |
| Msa0493410 | Msa0748170 | 0.805955 | 1.039872e-49 | -8.615850e-47 |
| Msa0502090 | Msa0748170 | 0.803963 | 2.712616e-49 | -8.615850e-47 |
| Msa0534900 | Msa0748170 | 0.829592 | 4.723042e-55 | -8.615850e-47 |
| Msa0539410 | Msa0748170 | 0.810791 | 9.668474e-51 | -8.615850e-47 |
| Msa0542090 | Msa0748170 | 0.821963 | 3.052105e-53 | -8.615850e-47 |
| Msa0542130 | Msa0748170 | 0.820158 | 7.951393e-53 | -8.615850e-47 |
| Msa0542290 | Msa0748170 | 0.803365 | 3.610300e-49 | -8.615850e-47 |
| Msa0542560 | Msa0748170 | 0.802655 | 5.061200e-49 | -8.615850e-47 |
| Msa0544840 | Msa0748170 | 0.835265 | 1.855677e-56 | -8.615850e-47 |
| Msa0547160 | Msa0748170 | 0.801072 | 1.069725e-48 | -8.615850e-47 |
| Msa0581110 | Msa0748170 | 0.831609 | 1.514725e-55 | -8.615850e-47 |
| Msa0581280 | Msa0748170 | 0.848344 | 6.508215e-60 | -8.615850e-47 |
| Msa0588260 | Msa0748170 | 0.810029 | 1.412498e-50 | -8.615850e-47 |
| Msa0600450 | Msa0748170 | 0.801632 | 8.215413e-49 | -8.615850e-47 |
| Msa0601150 | Msa0748170 | 0.814735 | 1.323962e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748170 | MtrunA17_Chr5g0446311 | 99.340 | 303 | 2 | 0 | 1 | 303 | 1 | 303 | 0.0 | 601 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748170 | AT3G18790.1 | 76.238 | 303 | 69 | 2 | 1 | 303 | 1 | 300 | 1.91e-149 | 421 |
Find 98 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCTGCTTATTATGGTTAT+AGG | 0.163690 | 5_2:+1307143 | Msa0748170:CDS |
| AGGATTAATGCTGCTTATTA+TGG | 0.220615 | 5_2:+1307136 | Msa0748170:CDS |
| AGAAAAGGACGGCGTTCTTT+AGG | 0.280108 | 5_2:-1306731 | None:intergenic |
| TGCTGCTTATTATGGTTATA+GGG | 0.299741 | 5_2:+1307144 | Msa0748170:CDS |
| GGATGATGAAGATGGGATAT+TGG | 0.324169 | 5_2:+1307165 | Msa0748170:CDS |
| GGGCCGGGGTATAGATATTT+TGG | 0.329847 | 5_2:+1307025 | Msa0748170:CDS |
| GAGGGAGATGAGGGAGAGGT+TGG | 0.336839 | 5_2:+1307378 | Msa0748170:CDS |
| ACCTCAACGAAGCTGATAAA+TGG | 0.339626 | 5_2:+1306771 | Msa0748170:CDS |
| TTCGTTGAGGTCACGGCATT+CGG | 0.365045 | 5_2:-1306759 | None:intergenic |
| GCAGAATGCCTCGCATAATT+CGG | 0.368301 | 5_2:-1306947 | None:intergenic |
| GTATGTCAGTGATGAGCTTA+TGG | 0.373343 | 5_2:+1307501 | Msa0748170:CDS |
| GAGAGGAGAATTGTTGAGCT+TGG | 0.400059 | 5_2:+1306920 | Msa0748170:CDS |
| TTTGAATCTCGGCGACTTTG+CGG | 0.401696 | 5_2:-1306820 | None:intergenic |
| GGGAGAGGTTGGATAGGATA+AGG | 0.401870 | 5_2:+1307242 | Msa0748170:CDS |
| TTCTCAATCTCTTTCTCATC+CGG | 0.403897 | 5_2:-1307439 | None:intergenic |
| CAGCAAATCATGCGTGAAAT+CGG | 0.409841 | 5_2:+1306797 | Msa0748170:CDS |
| TGTTGTGCATGTGCCATTGC+CGG | 0.419890 | 5_2:+1307420 | Msa0748170:CDS |
| ATTGGAGCGGGTTGAGGCAC+CGG | 0.422542 | 5_2:+1307183 | Msa0748170:CDS |
| TGAGAAAGAGATTGAGAAGA+TGG | 0.425940 | 5_2:+1307444 | Msa0748170:CDS |
| TTCTGCGAAAATGACTGATT+TGG | 0.430591 | 5_2:+1306964 | Msa0748170:CDS |
| AGCCGCCAGAGTTGAGGAAA+CGG | 0.430737 | 5_2:+1307089 | Msa0748170:CDS |
| GATGAAGGAGAGGGAGATGA+GGG | 0.439819 | 5_2:+1307369 | Msa0748170:CDS |
| GGTTGAGGAGTGGGAGAGGT+TGG | 0.442822 | 5_2:+1307231 | Msa0748170:CDS |
| TATGAGGCGGGAGGCGGTTG+AGG | 0.445034 | 5_2:+1307216 | Msa0748170:CDS |
| GCGGGAGGCGGTTGAGGAGT+GGG | 0.448024 | 5_2:+1307222 | Msa0748170:CDS |
| GGAGGAAGAGGATGTGGTGG+AGG | 0.450447 | 5_2:+1307339 | Msa0748170:CDS |
| AGGATGTGGTGGAGGAAGAG+AGG | 0.451153 | 5_2:+1307347 | Msa0748170:CDS |
| AGGAAGAGAGGATGAAGGAG+AGG | 0.452014 | 5_2:+1307359 | Msa0748170:CDS |
| CGAGATATGATATTTATAAG+AGG | 0.453995 | 5_2:+1307116 | Msa0748170:CDS |
| GCGGGTTGAGGCACCGGCTG+AGG | 0.458475 | 5_2:+1307189 | Msa0748170:CDS |
| CTAGGAAGGCTGTGAGGAGT+GGG | 0.459243 | 5_2:+1307272 | Msa0748170:CDS |
| GGATGAAGGAGAGGGAGATG+AGG | 0.468850 | 5_2:+1307368 | Msa0748170:CDS |
| ATAGGATAAGGAAGGAAGCT+AGG | 0.470791 | 5_2:+1307254 | Msa0748170:CDS |
| AGAGGTTGGATGAGAAAGAG+AGG | 0.481023 | 5_2:+1307392 | Msa0748170:CDS |
| AGGAGAGGGAGATGAGGGAG+AGG | 0.482030 | 5_2:+1307374 | Msa0748170:CDS |
| GAGGAGTGGGGAGGTTGTTG+AGG | 0.482912 | 5_2:+1307285 | Msa0748170:CDS |
| TGGGATATTGGAGCGGGTTG+AGG | 0.487195 | 5_2:+1307177 | Msa0748170:CDS |
| CGCCTCATACATTCCTCAGC+CGG | 0.489139 | 5_2:-1307202 | None:intergenic |
| TATCAGCTTCGTTGAGGTCA+CGG | 0.490438 | 5_2:-1306766 | None:intergenic |
| AGGCGGTTGAGGAGTGGGAG+AGG | 0.491691 | 5_2:+1307227 | Msa0748170:CDS |
| TAATTTCGTCGTTGAGATCA+CGG | 0.493082 | 5_2:-1306868 | None:intergenic |
| GGTTATAGGGATGATGAAGA+TGG | 0.495151 | 5_2:+1307157 | Msa0748170:CDS |
| TGGTGCGGCGAAGAAATTGC+CGG | 0.497574 | 5_2:+1307045 | Msa0748170:CDS |
| AGGAGTGGGAGAGGTTGGAT+AGG | 0.498229 | 5_2:+1307236 | Msa0748170:CDS |
| GGTGCGGCGAAGAAATTGCC+GGG | 0.501210 | 5_2:+1307046 | Msa0748170:CDS |
| ATCTCTTTCTCATCCGGCAA+TGG | 0.505971 | 5_2:-1307433 | None:intergenic |
| AGAAGACGGATTTGTTGAAT+CGG | 0.512072 | 5_2:+1307479 | Msa0748170:CDS |
| CGGCATTCGGAAGCGAGAAA+AGG | 0.513747 | 5_2:-1306746 | None:intergenic |
| GGTGGAGGAAGAGAGGATGA+AGG | 0.519325 | 5_2:+1307354 | Msa0748170:CDS |
| TGAGGAGGAAGAGGATGTGG+TGG | 0.519928 | 5_2:+1307336 | Msa0748170:CDS |
| GGAAGAGAGGATGAAGGAGA+GGG | 0.524110 | 5_2:+1307360 | Msa0748170:CDS |
| ATGAAGATGGGATATTGGAG+CGG | 0.526437 | 5_2:+1307170 | Msa0748170:CDS |
| GTTCCTAACCCTAGTGGAAG+GGG | 0.527308 | 5_2:+1307004 | Msa0748170:CDS |
| GGCGGGAGGCGGTTGAGGAG+TGG | 0.530068 | 5_2:+1307221 | Msa0748170:CDS |
| GTCCTCCGTTTCCTCAACTC+TGG | 0.530903 | 5_2:-1307094 | None:intergenic |
| GATAAGGAAGGAAGCTAGGA+AGG | 0.534959 | 5_2:+1307258 | Msa0748170:CDS |
| GATACTTCATGAGGAGGAAG+AGG | 0.539895 | 5_2:+1307327 | Msa0748170:CDS |
| GCGAAAATGACTGATTTGGA+TGG | 0.540673 | 5_2:+1306968 | Msa0748170:CDS |
| TTGAGGTTACTGCGGCTACG+AGG | 0.542022 | 5_2:+1307302 | Msa0748170:CDS |
| GCTAGGAAGGCTGTGAGGAG+TGG | 0.544777 | 5_2:+1307271 | Msa0748170:CDS |
| CACCGGCTGAGGAATGTATG+AGG | 0.544927 | 5_2:+1307200 | Msa0748170:CDS |
| TTGAGAAGCCGCCAGAGTTG+AGG | 0.545601 | 5_2:+1307083 | Msa0748170:CDS |
| GAGATTCAAAACGAAGGTCT+CGG | 0.546527 | 5_2:+1306833 | Msa0748170:CDS |
| TCATGAGGAGGAAGAGGATG+TGG | 0.548901 | 5_2:+1307333 | Msa0748170:CDS |
| GGCTGAGGAATGTATGAGGC+GGG | 0.550661 | 5_2:+1307204 | Msa0748170:CDS |
| GTTATAGGGATGATGAAGAT+GGG | 0.553326 | 5_2:+1307158 | Msa0748170:CDS |
| GAGGTTGGATAGGATAAGGA+AGG | 0.556697 | 5_2:+1307246 | Msa0748170:CDS |
| ATGTTCCTAACCCTAGTGGA+AGG | 0.561136 | 5_2:+1307002 | Msa0748170:CDS |
| GCCATTTATCAGCTTCGTTG+AGG | 0.567772 | 5_2:-1306772 | None:intergenic |
| GGAATGTATGAGGCGGGAGG+CGG | 0.568894 | 5_2:+1307210 | Msa0748170:CDS |
| AGGAGAATTGTTGAGCTTGG+AGG | 0.570345 | 5_2:+1306923 | Msa0748170:CDS |
| GAGGTTGGATGAGAAAGAGA+GGG | 0.574959 | 5_2:+1307393 | Msa0748170:CDS |
| GGAGGAGCAGACTGAAGCTA+AGG | 0.586889 | 5_2:+1307522 | Msa0748170:CDS |
| TGAAGATGGGATATTGGAGC+GGG | 0.592242 | 5_2:+1307171 | Msa0748170:CDS |
| GTTGATGTTCCTAACCCTAG+TGG | 0.600173 | 5_2:+1306998 | Msa0748170:CDS |
| TGTTCCTAACCCTAGTGGAA+GGG | 0.609021 | 5_2:+1307003 | Msa0748170:CDS |
| TAGGAAGGCTGTGAGGAGTG+GGG | 0.611922 | 5_2:+1307273 | Msa0748170:CDS |
| CGAAAATGACTGATTTGGAT+GGG | 0.613601 | 5_2:+1306969 | Msa0748170:CDS |
| CGGCTGAGGAATGTATGAGG+CGG | 0.623295 | 5_2:+1307203 | Msa0748170:CDS |
| TGAGGTTACTGCGGCTACGA+GGG | 0.625438 | 5_2:+1307303 | Msa0748170:CDS |
| CTCCGTTTCCTCAACTCTGG+CGG | 0.627535 | 5_2:-1307091 | None:intergenic |
| GTGCGGCGAAGAAATTGCCG+GGG | 0.629933 | 5_2:+1307047 | Msa0748170:CDS |
| ATTCGGAAGCGAGAAAAGGA+CGG | 0.632653 | 5_2:-1306742 | None:intergenic |
| CGTCGTTGAGATCACGGAGA+CGG | 0.644808 | 5_2:-1306862 | None:intergenic |
| GAAGGCTGTGAGGAGTGGGG+AGG | 0.648471 | 5_2:+1307276 | Msa0748170:CDS |
| GAGGGAGATACTTCATGAGG+AGG | 0.648473 | 5_2:+1307321 | Msa0748170:CDS |
| GCACCAAAATATCTATACCC+CGG | 0.652148 | 5_2:-1307028 | None:intergenic |
| GGTGTTGCAGAAGAAGAAGA+CGG | 0.654804 | 5_2:+1307465 | Msa0748170:CDS |
| TTCCTAACCCTAGTGGAAGG+GGG | 0.659153 | 5_2:+1307005 | Msa0748170:CDS |
| TACGAGGGAGATACTTCATG+AGG | 0.667838 | 5_2:+1307318 | Msa0748170:CDS |
| TGAGGAATGTATGAGGCGGG+AGG | 0.670206 | 5_2:+1307207 | Msa0748170:CDS |
| GTCGCCGAGATTCAAAACGA+AGG | 0.671719 | 5_2:+1306827 | Msa0748170:CDS |
| CGCCAGAGTTGAGGAAACGG+AGG | 0.674224 | 5_2:+1307092 | Msa0748170:CDS |
| TGCGGCGAAGAAATTGCCGG+GGG | 0.684263 | 5_2:+1307048 | Msa0748170:CDS |
| TTGGAGGACCGAATTATGCG+AGG | 0.690784 | 5_2:+1306939 | Msa0748170:CDS |
| TGTCAGTGATGAGCTTATGG+AGG | 0.691036 | 5_2:+1307504 | Msa0748170:CDS |
| GGAGGTTGTTGAGGTTACTG+CGG | 0.696634 | 5_2:+1307294 | Msa0748170:CDS |
| AGGAAGCTAGGAAGGCTGTG+AGG | 0.701271 | 5_2:+1307266 | Msa0748170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | CGAGATATGATATTTATAAG+AGG | + | chr5_2:1307116-1307135 | Msa0748170:CDS | 25.0% |
| ! | CGAGATATGATATTTATAAG+AGG | + | chr5_2:1307116-1307135 | Msa0748170:CDS | 25.0% |
| ! | AGGATTAATGCTGCTTATTA+TGG | + | chr5_2:1307136-1307155 | Msa0748170:CDS | 30.0% |
| ! | ATGCTGCTTATTATGGTTAT+AGG | + | chr5_2:1307143-1307162 | Msa0748170:CDS | 30.0% |
| ! | TGCTGCTTATTATGGTTATA+GGG | + | chr5_2:1307144-1307163 | Msa0748170:CDS | 30.0% |
| ! | AGGATTAATGCTGCTTATTA+TGG | + | chr5_2:1307136-1307155 | Msa0748170:CDS | 30.0% |
| ! | ATGCTGCTTATTATGGTTAT+AGG | + | chr5_2:1307143-1307162 | Msa0748170:CDS | 30.0% |
| ! | TGCTGCTTATTATGGTTATA+GGG | + | chr5_2:1307144-1307163 | Msa0748170:CDS | 30.0% |
| ! | CTTCTTTTCTTCAGCTTTCA+TGG | - | chr5_2:1306708-1306727 | None:intergenic | 35.0% |
| TAATTTCGTCGTTGAGATCA+CGG | - | chr5_2:1306871-1306890 | None:intergenic | 35.0% | |
| TCATTCGTGAAAAATCGCAT+TGG | + | chr5_2:1306897-1306916 | Msa0748170:CDS | 35.0% | |
| CATTCGTGAAAAATCGCATT+GGG | + | chr5_2:1306898-1306917 | Msa0748170:CDS | 35.0% | |
| TTCTGCGAAAATGACTGATT+TGG | + | chr5_2:1306964-1306983 | Msa0748170:CDS | 35.0% | |
| !! | CGAAAATGACTGATTTGGAT+GGG | + | chr5_2:1306969-1306988 | Msa0748170:CDS | 35.0% |
| GTTATAGGGATGATGAAGAT+GGG | + | chr5_2:1307158-1307177 | Msa0748170:CDS | 35.0% | |
| TTCTCAATCTCTTTCTCATC+CGG | - | chr5_2:1307442-1307461 | None:intergenic | 35.0% | |
| TGAGAAAGAGATTGAGAAGA+TGG | + | chr5_2:1307444-1307463 | Msa0748170:CDS | 35.0% | |
| !! | AGAAGACGGATTTGTTGAAT+CGG | + | chr5_2:1307479-1307498 | Msa0748170:CDS | 35.0% |
| ! | CTTCTTTTCTTCAGCTTTCA+TGG | - | chr5_2:1306708-1306727 | None:intergenic | 35.0% |
| TAATTTCGTCGTTGAGATCA+CGG | - | chr5_2:1306871-1306890 | None:intergenic | 35.0% | |
| TCATTCGTGAAAAATCGCAT+TGG | + | chr5_2:1306897-1306916 | Msa0748170:CDS | 35.0% | |
| CATTCGTGAAAAATCGCATT+GGG | + | chr5_2:1306898-1306917 | Msa0748170:CDS | 35.0% | |
| TTCTGCGAAAATGACTGATT+TGG | + | chr5_2:1306964-1306983 | Msa0748170:CDS | 35.0% | |
| !! | CGAAAATGACTGATTTGGAT+GGG | + | chr5_2:1306969-1306988 | Msa0748170:CDS | 35.0% |
| GTTATAGGGATGATGAAGAT+GGG | + | chr5_2:1307158-1307177 | Msa0748170:CDS | 35.0% | |
| TTCTCAATCTCTTTCTCATC+CGG | - | chr5_2:1307442-1307461 | None:intergenic | 35.0% | |
| TGAGAAAGAGATTGAGAAGA+TGG | + | chr5_2:1307444-1307463 | Msa0748170:CDS | 35.0% | |
| !! | AGAAGACGGATTTGTTGAAT+CGG | + | chr5_2:1307479-1307498 | Msa0748170:CDS | 35.0% |
| ACCTCAACGAAGCTGATAAA+TGG | + | chr5_2:1306771-1306790 | Msa0748170:CDS | 40.0% | |
| CAGCAAATCATGCGTGAAAT+CGG | + | chr5_2:1306797-1306816 | Msa0748170:CDS | 40.0% | |
| !! | GAGACCTTCGTTTTGAATCT+CGG | - | chr5_2:1306834-1306853 | None:intergenic | 40.0% |
| GAGATTCAAAACGAAGGTCT+CGG | + | chr5_2:1306833-1306852 | Msa0748170:CDS | 40.0% | |
| !! | GCGAAAATGACTGATTTGGA+TGG | + | chr5_2:1306968-1306987 | Msa0748170:CDS | 40.0% |
| GCACCAAAATATCTATACCC+CGG | - | chr5_2:1307031-1307050 | None:intergenic | 40.0% | |
| !!! | GGGGTATAGATATTTTGGTG+CGG | + | chr5_2:1307030-1307049 | Msa0748170:CDS | 40.0% |
| GGTTATAGGGATGATGAAGA+TGG | + | chr5_2:1307157-1307176 | Msa0748170:CDS | 40.0% | |
| GGATGATGAAGATGGGATAT+TGG | + | chr5_2:1307165-1307184 | Msa0748170:CDS | 40.0% | |
| ATGAAGATGGGATATTGGAG+CGG | + | chr5_2:1307170-1307189 | Msa0748170:CDS | 40.0% | |
| ATAGGATAAGGAAGGAAGCT+AGG | + | chr5_2:1307254-1307273 | Msa0748170:CDS | 40.0% | |
| GTATGTCAGTGATGAGCTTA+TGG | + | chr5_2:1307501-1307520 | Msa0748170:CDS | 40.0% | |
| ACCTCAACGAAGCTGATAAA+TGG | + | chr5_2:1306771-1306790 | Msa0748170:CDS | 40.0% | |
| CAGCAAATCATGCGTGAAAT+CGG | + | chr5_2:1306797-1306816 | Msa0748170:CDS | 40.0% | |
| !! | GAGACCTTCGTTTTGAATCT+CGG | - | chr5_2:1306834-1306853 | None:intergenic | 40.0% |
| GAGATTCAAAACGAAGGTCT+CGG | + | chr5_2:1306833-1306852 | Msa0748170:CDS | 40.0% | |
| !! | GCGAAAATGACTGATTTGGA+TGG | + | chr5_2:1306968-1306987 | Msa0748170:CDS | 40.0% |
| GCACCAAAATATCTATACCC+CGG | - | chr5_2:1307031-1307050 | None:intergenic | 40.0% | |
| !!! | GGGGTATAGATATTTTGGTG+CGG | + | chr5_2:1307030-1307049 | Msa0748170:CDS | 40.0% |
| GGTTATAGGGATGATGAAGA+TGG | + | chr5_2:1307157-1307176 | Msa0748170:CDS | 40.0% | |
| GGATGATGAAGATGGGATAT+TGG | + | chr5_2:1307165-1307184 | Msa0748170:CDS | 40.0% | |
| ATGAAGATGGGATATTGGAG+CGG | + | chr5_2:1307170-1307189 | Msa0748170:CDS | 40.0% | |
| ATAGGATAAGGAAGGAAGCT+AGG | + | chr5_2:1307254-1307273 | Msa0748170:CDS | 40.0% | |
| GTATGTCAGTGATGAGCTTA+TGG | + | chr5_2:1307501-1307520 | Msa0748170:CDS | 40.0% | |
| AGAAAAGGACGGCGTTCTTT+AGG | - | chr5_2:1306734-1306753 | None:intergenic | 45.0% | |
| ATTCGGAAGCGAGAAAAGGA+CGG | - | chr5_2:1306745-1306764 | None:intergenic | 45.0% | |
| TATCAGCTTCGTTGAGGTCA+CGG | - | chr5_2:1306769-1306788 | None:intergenic | 45.0% | |
| GCCATTTATCAGCTTCGTTG+AGG | - | chr5_2:1306775-1306794 | None:intergenic | 45.0% | |
| TTTGAATCTCGGCGACTTTG+CGG | - | chr5_2:1306823-1306842 | None:intergenic | 45.0% | |
| GTGAAAAATCGCATTGGGAG+AGG | + | chr5_2:1306903-1306922 | Msa0748170:CDS | 45.0% | |
| GAGAGGAGAATTGTTGAGCT+TGG | + | chr5_2:1306920-1306939 | Msa0748170:CDS | 45.0% | |
| AGGAGAATTGTTGAGCTTGG+AGG | + | chr5_2:1306923-1306942 | Msa0748170:CDS | 45.0% | |
| GCAGAATGCCTCGCATAATT+CGG | - | chr5_2:1306950-1306969 | None:intergenic | 45.0% | |
| GTTGATGTTCCTAACCCTAG+TGG | + | chr5_2:1306998-1307017 | Msa0748170:CDS | 45.0% | |
| ATGTTCCTAACCCTAGTGGA+AGG | + | chr5_2:1307002-1307021 | Msa0748170:CDS | 45.0% | |
| TGTTCCTAACCCTAGTGGAA+GGG | + | chr5_2:1307003-1307022 | Msa0748170:CDS | 45.0% | |
| TGAAGATGGGATATTGGAGC+GGG | + | chr5_2:1307171-1307190 | Msa0748170:CDS | 45.0% | |
| GAGGTTGGATAGGATAAGGA+AGG | + | chr5_2:1307246-1307265 | Msa0748170:CDS | 45.0% | |
| GATAAGGAAGGAAGCTAGGA+AGG | + | chr5_2:1307258-1307277 | Msa0748170:CDS | 45.0% | |
| TACGAGGGAGATACTTCATG+AGG | + | chr5_2:1307318-1307337 | Msa0748170:CDS | 45.0% | |
| GATACTTCATGAGGAGGAAG+AGG | + | chr5_2:1307327-1307346 | Msa0748170:CDS | 45.0% | |
| AGAGGTTGGATGAGAAAGAG+AGG | + | chr5_2:1307392-1307411 | Msa0748170:CDS | 45.0% | |
| GAGGTTGGATGAGAAAGAGA+GGG | + | chr5_2:1307393-1307412 | Msa0748170:CDS | 45.0% | |
| ATCTCTTTCTCATCCGGCAA+TGG | - | chr5_2:1307436-1307455 | None:intergenic | 45.0% | |
| ! | GGTGTTGCAGAAGAAGAAGA+CGG | + | chr5_2:1307465-1307484 | Msa0748170:CDS | 45.0% |
| TGTCAGTGATGAGCTTATGG+AGG | + | chr5_2:1307504-1307523 | Msa0748170:CDS | 45.0% | |
| AGAAAAGGACGGCGTTCTTT+AGG | - | chr5_2:1306734-1306753 | None:intergenic | 45.0% | |
| ATTCGGAAGCGAGAAAAGGA+CGG | - | chr5_2:1306745-1306764 | None:intergenic | 45.0% | |
| TATCAGCTTCGTTGAGGTCA+CGG | - | chr5_2:1306769-1306788 | None:intergenic | 45.0% | |
| GCCATTTATCAGCTTCGTTG+AGG | - | chr5_2:1306775-1306794 | None:intergenic | 45.0% | |
| TTTGAATCTCGGCGACTTTG+CGG | - | chr5_2:1306823-1306842 | None:intergenic | 45.0% | |
| GTGAAAAATCGCATTGGGAG+AGG | + | chr5_2:1306903-1306922 | Msa0748170:CDS | 45.0% | |
| GAGAGGAGAATTGTTGAGCT+TGG | + | chr5_2:1306920-1306939 | Msa0748170:CDS | 45.0% | |
| AGGAGAATTGTTGAGCTTGG+AGG | + | chr5_2:1306923-1306942 | Msa0748170:CDS | 45.0% | |
| GCAGAATGCCTCGCATAATT+CGG | - | chr5_2:1306950-1306969 | None:intergenic | 45.0% | |
| GTTGATGTTCCTAACCCTAG+TGG | + | chr5_2:1306998-1307017 | Msa0748170:CDS | 45.0% | |
| ATGTTCCTAACCCTAGTGGA+AGG | + | chr5_2:1307002-1307021 | Msa0748170:CDS | 45.0% | |
| TGTTCCTAACCCTAGTGGAA+GGG | + | chr5_2:1307003-1307022 | Msa0748170:CDS | 45.0% | |
| TGAAGATGGGATATTGGAGC+GGG | + | chr5_2:1307171-1307190 | Msa0748170:CDS | 45.0% | |
| GAGGTTGGATAGGATAAGGA+AGG | + | chr5_2:1307246-1307265 | Msa0748170:CDS | 45.0% | |
| GATAAGGAAGGAAGCTAGGA+AGG | + | chr5_2:1307258-1307277 | Msa0748170:CDS | 45.0% | |
| TACGAGGGAGATACTTCATG+AGG | + | chr5_2:1307318-1307337 | Msa0748170:CDS | 45.0% | |
| GATACTTCATGAGGAGGAAG+AGG | + | chr5_2:1307327-1307346 | Msa0748170:CDS | 45.0% | |
| AGAGGTTGGATGAGAAAGAG+AGG | + | chr5_2:1307392-1307411 | Msa0748170:CDS | 45.0% | |
| GAGGTTGGATGAGAAAGAGA+GGG | + | chr5_2:1307393-1307412 | Msa0748170:CDS | 45.0% | |
| ATCTCTTTCTCATCCGGCAA+TGG | - | chr5_2:1307436-1307455 | None:intergenic | 45.0% | |
| ! | GGTGTTGCAGAAGAAGAAGA+CGG | + | chr5_2:1307465-1307484 | Msa0748170:CDS | 45.0% |
| TGTCAGTGATGAGCTTATGG+AGG | + | chr5_2:1307504-1307523 | Msa0748170:CDS | 45.0% | |
| TTCGTTGAGGTCACGGCATT+CGG | - | chr5_2:1306762-1306781 | None:intergenic | 50.0% | |
| GTCGCCGAGATTCAAAACGA+AGG | + | chr5_2:1306827-1306846 | Msa0748170:CDS | 50.0% | |
| TTGGAGGACCGAATTATGCG+AGG | + | chr5_2:1306939-1306958 | Msa0748170:CDS | 50.0% | |
| GTTCCTAACCCTAGTGGAAG+GGG | + | chr5_2:1307004-1307023 | Msa0748170:CDS | 50.0% | |
| TTCCTAACCCTAGTGGAAGG+GGG | + | chr5_2:1307005-1307024 | Msa0748170:CDS | 50.0% | |
| ! | GGGCCGGGGTATAGATATTT+TGG | + | chr5_2:1307025-1307044 | Msa0748170:CDS | 50.0% |
| GAAGAAATTGCCGGGGGTTA+GGG | + | chr5_2:1307054-1307073 | Msa0748170:CDS | 50.0% | |
| TCAAAAAGCTCCCTAACCCC+CGG | - | chr5_2:1307067-1307086 | None:intergenic | 50.0% | |
| GGGAGAGGTTGGATAGGATA+AGG | + | chr5_2:1307242-1307261 | Msa0748170:CDS | 50.0% | |
| GGAGGTTGTTGAGGTTACTG+CGG | + | chr5_2:1307294-1307313 | Msa0748170:CDS | 50.0% | |
| GAGGGAGATACTTCATGAGG+AGG | + | chr5_2:1307321-1307340 | Msa0748170:CDS | 50.0% | |
| TCATGAGGAGGAAGAGGATG+TGG | + | chr5_2:1307333-1307352 | Msa0748170:CDS | 50.0% | |
| AGGAAGAGAGGATGAAGGAG+AGG | + | chr5_2:1307359-1307378 | Msa0748170:CDS | 50.0% | |
| GGAAGAGAGGATGAAGGAGA+GGG | + | chr5_2:1307360-1307379 | Msa0748170:CDS | 50.0% | |
| GATGAAGGAGAGGGAGATGA+GGG | + | chr5_2:1307369-1307388 | Msa0748170:CDS | 50.0% | |
| ! | TGTTGTGCATGTGCCATTGC+CGG | + | chr5_2:1307420-1307439 | Msa0748170:CDS | 50.0% |
| TTCGTTGAGGTCACGGCATT+CGG | - | chr5_2:1306762-1306781 | None:intergenic | 50.0% | |
| GTCGCCGAGATTCAAAACGA+AGG | + | chr5_2:1306827-1306846 | Msa0748170:CDS | 50.0% | |
| TTGGAGGACCGAATTATGCG+AGG | + | chr5_2:1306939-1306958 | Msa0748170:CDS | 50.0% | |
| GTTCCTAACCCTAGTGGAAG+GGG | + | chr5_2:1307004-1307023 | Msa0748170:CDS | 50.0% | |
| TTCCTAACCCTAGTGGAAGG+GGG | + | chr5_2:1307005-1307024 | Msa0748170:CDS | 50.0% | |
| ! | GGGCCGGGGTATAGATATTT+TGG | + | chr5_2:1307025-1307044 | Msa0748170:CDS | 50.0% |
| GAAGAAATTGCCGGGGGTTA+GGG | + | chr5_2:1307054-1307073 | Msa0748170:CDS | 50.0% | |
| TCAAAAAGCTCCCTAACCCC+CGG | - | chr5_2:1307067-1307086 | None:intergenic | 50.0% | |
| GGGAGAGGTTGGATAGGATA+AGG | + | chr5_2:1307242-1307261 | Msa0748170:CDS | 50.0% | |
| GGAGGTTGTTGAGGTTACTG+CGG | + | chr5_2:1307294-1307313 | Msa0748170:CDS | 50.0% | |
| GAGGGAGATACTTCATGAGG+AGG | + | chr5_2:1307321-1307340 | Msa0748170:CDS | 50.0% | |
| TCATGAGGAGGAAGAGGATG+TGG | + | chr5_2:1307333-1307352 | Msa0748170:CDS | 50.0% | |
| AGGAAGAGAGGATGAAGGAG+AGG | + | chr5_2:1307359-1307378 | Msa0748170:CDS | 50.0% | |
| GGAAGAGAGGATGAAGGAGA+GGG | + | chr5_2:1307360-1307379 | Msa0748170:CDS | 50.0% | |
| GATGAAGGAGAGGGAGATGA+GGG | + | chr5_2:1307369-1307388 | Msa0748170:CDS | 50.0% | |
| ! | TGTTGTGCATGTGCCATTGC+CGG | + | chr5_2:1307420-1307439 | Msa0748170:CDS | 50.0% |
| CGGCATTCGGAAGCGAGAAA+AGG | - | chr5_2:1306749-1306768 | None:intergenic | 55.0% | |
| CGTCGTTGAGATCACGGAGA+CGG | - | chr5_2:1306865-1306884 | None:intergenic | 55.0% | |
| TGGTGCGGCGAAGAAATTGC+CGG | + | chr5_2:1307045-1307064 | Msa0748170:CDS | 55.0% | |
| CGAAGAAATTGCCGGGGGTT+AGG | + | chr5_2:1307053-1307072 | Msa0748170:CDS | 55.0% | |
| TTGAGAAGCCGCCAGAGTTG+AGG | + | chr5_2:1307083-1307102 | Msa0748170:CDS | 55.0% | |
| AGCCGCCAGAGTTGAGGAAA+CGG | + | chr5_2:1307089-1307108 | Msa0748170:CDS | 55.0% | |
| CTCCGTTTCCTCAACTCTGG+CGG | - | chr5_2:1307094-1307113 | None:intergenic | 55.0% | |
| GTCCTCCGTTTCCTCAACTC+TGG | - | chr5_2:1307097-1307116 | None:intergenic | 55.0% | |
| !! | TGGGATATTGGAGCGGGTTG+AGG | + | chr5_2:1307177-1307196 | Msa0748170:CDS | 55.0% |
| ! | CACCGGCTGAGGAATGTATG+AGG | + | chr5_2:1307200-1307219 | Msa0748170:CDS | 55.0% |
| CGCCTCATACATTCCTCAGC+CGG | - | chr5_2:1307205-1307224 | None:intergenic | 55.0% | |
| CGGCTGAGGAATGTATGAGG+CGG | + | chr5_2:1307203-1307222 | Msa0748170:CDS | 55.0% | |
| GGCTGAGGAATGTATGAGGC+GGG | + | chr5_2:1307204-1307223 | Msa0748170:CDS | 55.0% | |
| TGAGGAATGTATGAGGCGGG+AGG | + | chr5_2:1307207-1307226 | Msa0748170:CDS | 55.0% | |
| AGGAGTGGGAGAGGTTGGAT+AGG | + | chr5_2:1307236-1307255 | Msa0748170:CDS | 55.0% | |
| AGGAAGCTAGGAAGGCTGTG+AGG | + | chr5_2:1307266-1307285 | Msa0748170:CDS | 55.0% | |
| CTAGGAAGGCTGTGAGGAGT+GGG | + | chr5_2:1307272-1307291 | Msa0748170:CDS | 55.0% | |
| TAGGAAGGCTGTGAGGAGTG+GGG | + | chr5_2:1307273-1307292 | Msa0748170:CDS | 55.0% | |
| TTGAGGTTACTGCGGCTACG+AGG | + | chr5_2:1307302-1307321 | Msa0748170:CDS | 55.0% | |
| TGAGGTTACTGCGGCTACGA+GGG | + | chr5_2:1307303-1307322 | Msa0748170:CDS | 55.0% | |
| TGAGGAGGAAGAGGATGTGG+TGG | + | chr5_2:1307336-1307355 | Msa0748170:CDS | 55.0% | |
| ! | AGGATGTGGTGGAGGAAGAG+AGG | + | chr5_2:1307347-1307366 | Msa0748170:CDS | 55.0% |
| GGTGGAGGAAGAGAGGATGA+AGG | + | chr5_2:1307354-1307373 | Msa0748170:CDS | 55.0% | |
| GGATGAAGGAGAGGGAGATG+AGG | + | chr5_2:1307368-1307387 | Msa0748170:CDS | 55.0% | |
| GGAGGAGCAGACTGAAGCTA+AGG | + | chr5_2:1307522-1307541 | Msa0748170:CDS | 55.0% | |
| CGGCATTCGGAAGCGAGAAA+AGG | - | chr5_2:1306749-1306768 | None:intergenic | 55.0% | |
| CGTCGTTGAGATCACGGAGA+CGG | - | chr5_2:1306865-1306884 | None:intergenic | 55.0% | |
| TGGTGCGGCGAAGAAATTGC+CGG | + | chr5_2:1307045-1307064 | Msa0748170:CDS | 55.0% | |
| CGAAGAAATTGCCGGGGGTT+AGG | + | chr5_2:1307053-1307072 | Msa0748170:CDS | 55.0% | |
| TTGAGAAGCCGCCAGAGTTG+AGG | + | chr5_2:1307083-1307102 | Msa0748170:CDS | 55.0% | |
| AGCCGCCAGAGTTGAGGAAA+CGG | + | chr5_2:1307089-1307108 | Msa0748170:CDS | 55.0% | |
| CTCCGTTTCCTCAACTCTGG+CGG | - | chr5_2:1307094-1307113 | None:intergenic | 55.0% | |
| GTCCTCCGTTTCCTCAACTC+TGG | - | chr5_2:1307097-1307116 | None:intergenic | 55.0% | |
| !! | TGGGATATTGGAGCGGGTTG+AGG | + | chr5_2:1307177-1307196 | Msa0748170:CDS | 55.0% |
| ! | CACCGGCTGAGGAATGTATG+AGG | + | chr5_2:1307200-1307219 | Msa0748170:CDS | 55.0% |
| CGCCTCATACATTCCTCAGC+CGG | - | chr5_2:1307205-1307224 | None:intergenic | 55.0% | |
| CGGCTGAGGAATGTATGAGG+CGG | + | chr5_2:1307203-1307222 | Msa0748170:CDS | 55.0% | |
| GGCTGAGGAATGTATGAGGC+GGG | + | chr5_2:1307204-1307223 | Msa0748170:CDS | 55.0% | |
| TGAGGAATGTATGAGGCGGG+AGG | + | chr5_2:1307207-1307226 | Msa0748170:CDS | 55.0% | |
| AGGAGTGGGAGAGGTTGGAT+AGG | + | chr5_2:1307236-1307255 | Msa0748170:CDS | 55.0% | |
| AGGAAGCTAGGAAGGCTGTG+AGG | + | chr5_2:1307266-1307285 | Msa0748170:CDS | 55.0% | |
| CTAGGAAGGCTGTGAGGAGT+GGG | + | chr5_2:1307272-1307291 | Msa0748170:CDS | 55.0% | |
| TAGGAAGGCTGTGAGGAGTG+GGG | + | chr5_2:1307273-1307292 | Msa0748170:CDS | 55.0% | |
| TTGAGGTTACTGCGGCTACG+AGG | + | chr5_2:1307302-1307321 | Msa0748170:CDS | 55.0% | |
| TGAGGTTACTGCGGCTACGA+GGG | + | chr5_2:1307303-1307322 | Msa0748170:CDS | 55.0% | |
| TGAGGAGGAAGAGGATGTGG+TGG | + | chr5_2:1307336-1307355 | Msa0748170:CDS | 55.0% | |
| ! | AGGATGTGGTGGAGGAAGAG+AGG | + | chr5_2:1307347-1307366 | Msa0748170:CDS | 55.0% |
| GGTGGAGGAAGAGAGGATGA+AGG | + | chr5_2:1307354-1307373 | Msa0748170:CDS | 55.0% | |
| GGATGAAGGAGAGGGAGATG+AGG | + | chr5_2:1307368-1307387 | Msa0748170:CDS | 55.0% | |
| GGAGGAGCAGACTGAAGCTA+AGG | + | chr5_2:1307522-1307541 | Msa0748170:CDS | 55.0% | |
| TAACCCTAGTGGAAGGGGGC+CGG | + | chr5_2:1307009-1307028 | Msa0748170:CDS | 60.0% | |
| GGTGCGGCGAAGAAATTGCC+GGG | + | chr5_2:1307046-1307065 | Msa0748170:CDS | 60.0% | |
| GTGCGGCGAAGAAATTGCCG+GGG | + | chr5_2:1307047-1307066 | Msa0748170:CDS | 60.0% | |
| TGCGGCGAAGAAATTGCCGG+GGG | + | chr5_2:1307048-1307067 | Msa0748170:CDS | 60.0% | |
| CGCCAGAGTTGAGGAAACGG+AGG | + | chr5_2:1307092-1307111 | Msa0748170:CDS | 60.0% | |
| !! | ATTGGAGCGGGTTGAGGCAC+CGG | + | chr5_2:1307183-1307202 | Msa0748170:CDS | 60.0% |
| GGAATGTATGAGGCGGGAGG+CGG | + | chr5_2:1307210-1307229 | Msa0748170:CDS | 60.0% | |
| GGTTGAGGAGTGGGAGAGGT+TGG | + | chr5_2:1307231-1307250 | Msa0748170:CDS | 60.0% | |
| GCTAGGAAGGCTGTGAGGAG+TGG | + | chr5_2:1307271-1307290 | Msa0748170:CDS | 60.0% | |
| GAGGAGTGGGGAGGTTGTTG+AGG | + | chr5_2:1307285-1307304 | Msa0748170:CDS | 60.0% | |
| GGAGGAAGAGGATGTGGTGG+AGG | + | chr5_2:1307339-1307358 | Msa0748170:CDS | 60.0% | |
| AGGAGAGGGAGATGAGGGAG+AGG | + | chr5_2:1307374-1307393 | Msa0748170:CDS | 60.0% | |
| GAGGGAGATGAGGGAGAGGT+TGG | + | chr5_2:1307378-1307397 | Msa0748170:CDS | 60.0% | |
| TAACCCTAGTGGAAGGGGGC+CGG | + | chr5_2:1307009-1307028 | Msa0748170:CDS | 60.0% | |
| GGTGCGGCGAAGAAATTGCC+GGG | + | chr5_2:1307046-1307065 | Msa0748170:CDS | 60.0% | |
| GTGCGGCGAAGAAATTGCCG+GGG | + | chr5_2:1307047-1307066 | Msa0748170:CDS | 60.0% | |
| TGCGGCGAAGAAATTGCCGG+GGG | + | chr5_2:1307048-1307067 | Msa0748170:CDS | 60.0% | |
| CGCCAGAGTTGAGGAAACGG+AGG | + | chr5_2:1307092-1307111 | Msa0748170:CDS | 60.0% | |
| !! | ATTGGAGCGGGTTGAGGCAC+CGG | + | chr5_2:1307183-1307202 | Msa0748170:CDS | 60.0% |
| GGAATGTATGAGGCGGGAGG+CGG | + | chr5_2:1307210-1307229 | Msa0748170:CDS | 60.0% | |
| GGTTGAGGAGTGGGAGAGGT+TGG | + | chr5_2:1307231-1307250 | Msa0748170:CDS | 60.0% | |
| GCTAGGAAGGCTGTGAGGAG+TGG | + | chr5_2:1307271-1307290 | Msa0748170:CDS | 60.0% | |
| GAGGAGTGGGGAGGTTGTTG+AGG | + | chr5_2:1307285-1307304 | Msa0748170:CDS | 60.0% | |
| GGAGGAAGAGGATGTGGTGG+AGG | + | chr5_2:1307339-1307358 | Msa0748170:CDS | 60.0% | |
| AGGAGAGGGAGATGAGGGAG+AGG | + | chr5_2:1307374-1307393 | Msa0748170:CDS | 60.0% | |
| GAGGGAGATGAGGGAGAGGT+TGG | + | chr5_2:1307378-1307397 | Msa0748170:CDS | 60.0% | |
| GGCCCCCTTCCACTAGGGTT+AGG | - | chr5_2:1307010-1307029 | None:intergenic | 65.0% | |
| AACCCTAGTGGAAGGGGGCC+GGG | + | chr5_2:1307010-1307029 | Msa0748170:CDS | 65.0% | |
| TATGAGGCGGGAGGCGGTTG+AGG | + | chr5_2:1307216-1307235 | Msa0748170:CDS | 65.0% | |
| AGGCGGTTGAGGAGTGGGAG+AGG | + | chr5_2:1307227-1307246 | Msa0748170:CDS | 65.0% | |
| GAAGGCTGTGAGGAGTGGGG+AGG | + | chr5_2:1307276-1307295 | Msa0748170:CDS | 65.0% | |
| GGCCCCCTTCCACTAGGGTT+AGG | - | chr5_2:1307010-1307029 | None:intergenic | 65.0% | |
| AACCCTAGTGGAAGGGGGCC+GGG | + | chr5_2:1307010-1307029 | Msa0748170:CDS | 65.0% | |
| TATGAGGCGGGAGGCGGTTG+AGG | + | chr5_2:1307216-1307235 | Msa0748170:CDS | 65.0% | |
| AGGCGGTTGAGGAGTGGGAG+AGG | + | chr5_2:1307227-1307246 | Msa0748170:CDS | 65.0% | |
| GAAGGCTGTGAGGAGTGGGG+AGG | + | chr5_2:1307276-1307295 | Msa0748170:CDS | 65.0% | |
| ACCCTAGTGGAAGGGGGCCG+GGG | + | chr5_2:1307011-1307030 | Msa0748170:CDS | 70.0% | |
| ACCCCGGCCCCCTTCCACTA+GGG | - | chr5_2:1307015-1307034 | None:intergenic | 70.0% | |
| TACCCCGGCCCCCTTCCACT+AGG | - | chr5_2:1307016-1307035 | None:intergenic | 70.0% | |
| GCGGGAGGCGGTTGAGGAGT+GGG | + | chr5_2:1307222-1307241 | Msa0748170:CDS | 70.0% | |
| ACCCTAGTGGAAGGGGGCCG+GGG | + | chr5_2:1307011-1307030 | Msa0748170:CDS | 70.0% | |
| ACCCCGGCCCCCTTCCACTA+GGG | - | chr5_2:1307015-1307034 | None:intergenic | 70.0% | |
| TACCCCGGCCCCCTTCCACT+AGG | - | chr5_2:1307016-1307035 | None:intergenic | 70.0% | |
| GCGGGAGGCGGTTGAGGAGT+GGG | + | chr5_2:1307222-1307241 | Msa0748170:CDS | 70.0% | |
| !! | GCGGGTTGAGGCACCGGCTG+AGG | + | chr5_2:1307189-1307208 | Msa0748170:CDS | 75.0% |
| GGCGGGAGGCGGTTGAGGAG+TGG | + | chr5_2:1307221-1307240 | Msa0748170:CDS | 75.0% | |
| !! | GCGGGTTGAGGCACCGGCTG+AGG | + | chr5_2:1307189-1307208 | Msa0748170:CDS | 75.0% |
| GGCGGGAGGCGGTTGAGGAG+TGG | + | chr5_2:1307221-1307240 | Msa0748170:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 1306656 | 1307567 | 1306656 | ID=Msa0748170;Name=Msa0748170 |
| chr5_2 | mRNA | 1306656 | 1307567 | 1306656 | ID=Msa0748170-mRNA-1;Parent=Msa0748170;Name=Msa0748170-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|303 |
| chr5_2 | exon | 1306656 | 1307567 | 1306656 | ID=Msa0748170-mRNA-1:exon:319;Parent=Msa0748170-mRNA-1 |
| chr5_2 | CDS | 1306656 | 1307567 | 1306656 | ID=Msa0748170-mRNA-1:cds;Parent=Msa0748170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
