Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453880 | sp|O24527|SIK1_ARATH | 57.805 | 410 | 144 | 9 | 6 | 400 | 441 | 836 | 6.78e-140 | 422 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453880 | A0A068LJR7 | 98.228 | 395 | 7 | 0 | 6 | 400 | 431 | 825 | 0.0 | 811 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032470 | Msa1453880 | 0.805113 | 1.561483e-49 | -8.615850e-47 |
| Msa0071250 | Msa1453880 | 0.815910 | 7.255622e-52 | -8.615850e-47 |
| Msa0072420 | Msa1453880 | 0.834745 | 2.508749e-56 | -8.615850e-47 |
| Msa0106850 | Msa1453880 | 0.804283 | 2.327013e-49 | -8.615850e-47 |
| Msa1358500 | Msa1453880 | 0.813463 | 2.527270e-51 | -8.615850e-47 |
| Msa1401990 | Msa1453880 | 0.803518 | 3.354711e-49 | -8.615850e-47 |
| Msa1419690 | Msa1453880 | 0.847908 | 8.585755e-60 | -8.615850e-47 |
| Msa1434740 | Msa1453880 | 0.803300 | 3.722662e-49 | -8.615850e-47 |
| Msa1453880 | Msa1457620 | 0.814733 | 1.325820e-51 | -8.615850e-47 |
| Msa0604290 | Msa1453880 | 0.818463 | 1.934596e-52 | -8.615850e-47 |
| Msa0741440 | Msa1453880 | 0.829208 | 5.855243e-55 | -8.615850e-47 |
| Msa0747630 | Msa1453880 | 0.826868 | 2.142239e-54 | -8.615850e-47 |
| Msa0822500 | Msa1453880 | 0.815798 | 7.685575e-52 | -8.615850e-47 |
| Msa0148080 | Msa1453880 | 0.816952 | 4.241664e-52 | -8.615850e-47 |
| Msa0167980 | Msa1453880 | 0.803662 | 3.132376e-49 | -8.615850e-47 |
| Msa0204960 | Msa1453880 | 0.817730 | 2.833638e-52 | -8.615850e-47 |
| Msa0207040 | Msa1453880 | -0.803297 | 3.729154e-49 | -8.615850e-47 |
| Msa0209350 | Msa1453880 | 0.804608 | 1.990975e-49 | -8.615850e-47 |
| Msa0214550 | Msa1453880 | 0.807018 | 6.203674e-50 | -8.615850e-47 |
| Msa1271130 | Msa1453880 | 0.832296 | 1.025166e-55 | -8.615850e-47 |
| Msa1305810 | Msa1453880 | 0.813362 | 2.659472e-51 | -8.615850e-47 |
| Msa1341060 | Msa1453880 | 0.801139 | 1.036517e-48 | -8.615850e-47 |
| Msa0385500 | Msa1453880 | 0.819933 | 8.952836e-53 | -8.615850e-47 |
| Msa0389210 | Msa1453880 | 0.812550 | 4.007190e-51 | -8.615850e-47 |
| Msa0398660 | Msa1453880 | 0.802157 | 6.409660e-49 | -8.615850e-47 |
| Msa0398670 | Msa1453880 | 0.815204 | 1.042282e-51 | -8.615850e-47 |
| Msa1029050 | Msa1453880 | 0.814666 | 1.371732e-51 | -8.615850e-47 |
| Msa1059470 | Msa1453880 | 0.808681 | 2.748409e-50 | -8.615850e-47 |
| Msa0257490 | Msa1453880 | 0.820374 | 7.095856e-53 | -8.615850e-47 |
| Msa0261090 | Msa1453880 | 0.800790 | 1.221403e-48 | -8.615850e-47 |
| Msa0271770 | Msa1453880 | 0.802043 | 6.763596e-49 | -8.615850e-47 |
| Msa0272300 | Msa1453880 | 0.814404 | 1.567596e-51 | -8.615850e-47 |
| Msa0281530 | Msa1453880 | 0.827830 | 1.259793e-54 | -8.615850e-47 |
| Msa0305410 | Msa1453880 | 0.801986 | 6.951120e-49 | -8.615850e-47 |
| Msa0320590 | Msa1453880 | 0.800763 | 1.237412e-48 | -8.615850e-47 |
| Msa0361490 | Msa1453880 | 0.802374 | 5.784194e-49 | -8.615850e-47 |
| Msa1158640 | Msa1453880 | -0.832342 | 9.982903e-56 | -8.615850e-47 |
| Msa1213890 | Msa1453880 | 0.804827 | 1.791679e-49 | -8.615850e-47 |
| Msa0527540 | Msa1453880 | 0.834648 | 2.653684e-56 | -8.615850e-47 |
| Msa0542290 | Msa1453880 | 0.818310 | 2.095688e-52 | -8.615850e-47 |
| Msa0542560 | Msa1453880 | 0.822435 | 2.372019e-53 | -8.615850e-47 |
| Msa0544840 | Msa1453880 | 0.824437 | 8.077053e-54 | -8.615850e-47 |
| Msa0847150 | Msa1453880 | 0.926484 | 4.400070e-91 | -8.615850e-47 |
| Msa0933380 | Msa1453880 | 0.809111 | 2.224057e-50 | -8.615850e-47 |
| Msa0974950 | Msa1453880 | 0.805605 | 1.231238e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453880 | MtrunA17_Chr5g0419441 | 97.975 | 395 | 7 | 1 | 6 | 400 | 431 | 824 | 0.0 | 803 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453880 | AT1G69220.2 | 57.805 | 410 | 144 | 9 | 6 | 400 | 414 | 809 | 3.77e-141 | 422 |
| Msa1453880 | AT1G69220.1 | 57.805 | 410 | 144 | 9 | 6 | 400 | 441 | 836 | 6.89e-141 | 422 |
Find 117 sgRNAs with CRISPR-Local
Find 377 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTATATTGGCAGGTAATTT+TGG | 0.164103 | tig0034928:+4213 | Msa1453880:intron |
| CAGGGCTTCAATGGCTTTAC+AGG | 0.203166 | tig0034928:+3437 | Msa1453880:CDS |
| GTCAAACATCGTGTAATATA+TGG | 0.204995 | tig0034928:+6142 | Msa1453880:three_prime_UTR |
| TATTCCTCTGCGACCCTTCT+TGG | 0.224513 | tig0034928:-5381 | Msa1453880:intergenic |
| TGTATTACCAGCGGCATAAA+TGG | 0.246184 | tig0034928:-5216 | Msa1453880:intergenic |
| AAGTTCTACTCTAATGAATT+TGG | 0.251510 | tig0034928:+5550 | Msa1453880:CDS |
| GTAAGTATCATCGTATAATA+AGG | 0.252616 | tig0034928:-6023 | Msa1453880:intergenic |
| ATGGTTATGTCAACTTATCT+TGG | 0.319648 | tig0034928:-5985 | Msa1453880:intergenic |
| TTTGAATAGTTCGCTGCTCC+TGG | 0.329621 | tig0034928:-5892 | Msa1453880:intergenic |
| TAGAAAAGGCAAGGCAAGTC+AGG | 0.345491 | tig0034928:+3418 | Msa1453880:CDS |
| CAAATTTGCTTTACAAGATA+AGG | 0.348672 | tig0034928:+4923 | Msa1453880:CDS |
| AGGGCGGAGTCGAGGTTCTT+TGG | 0.354134 | tig0034928:-2190 | Msa1453880:intergenic |
| CAGTGCCCATACCATTCTTA+AGG | 0.384893 | tig0034928:+5237 | Msa1453880:CDS |
| TGGTTATGTCAACTTATCTT+GGG | 0.386862 | tig0034928:-5984 | Msa1453880:intergenic |
| AAGGGCACGCTAAAGGAAAA+TGG | 0.387380 | tig0034928:-6004 | Msa1453880:intergenic |
| AGCGCCTATGTTCTGAGGTC+TGG | 0.391899 | tig0034928:-3727 | Msa1453880:intergenic |
| TCCGTACTCGTCATTAAGTA+TGG | 0.410654 | tig0034928:-3691 | Msa1453880:intergenic |
| TAGAACTTGAGGTCAATCTT+TGG | 0.411865 | tig0034928:-5535 | Msa1453880:intergenic |
| GGAGTCGAGGTTCTTTGGTC+AGG | 0.414669 | tig0034928:-2185 | Msa1453880:intergenic |
| ACCTGATCTCCTGCAGCAGC+TGG | 0.417606 | tig0034928:-3474 | Msa1453880:intergenic |
| TGTGCTTGGCGGCATGCAAC+AGG | 0.421882 | tig0034928:+5298 | Msa1453880:CDS |
| TAAGTATCATCGTATAATAA+GGG | 0.424062 | tig0034928:-6022 | Msa1453880:intergenic |
| GTCAATCTTTGGCAAATGCT+TGG | 0.431871 | tig0034928:-5524 | Msa1453880:intergenic |
| TATCGAGCACAAGCTGGAAT+TGG | 0.432020 | tig0034928:+4855 | Msa1453880:CDS |
| CAACAGGATACAAGTGGAAC+TGG | 0.436924 | tig0034928:+5314 | Msa1453880:CDS |
| CTCCTTTCAGACAATGTGCT+TGG | 0.437738 | tig0034928:+5284 | Msa1453880:CDS |
| ATCGGATGCACTGATGATCT+TGG | 0.440350 | tig0034928:-143 | Msa1453880:intergenic |
| TCCAGCTGCTGCAGGAGATC+AGG | 0.442451 | tig0034928:+3473 | Msa1453880:CDS |
| TTGTCTGAAAGGAGAGCAAT+AGG | 0.449448 | tig0034928:-5275 | Msa1453880:intergenic |
| TATATTACACGATGTTTGAC+TGG | 0.456222 | tig0034928:-6139 | Msa1453880:intergenic |
| TGGCAAATGCTTGGAGGAAG+TGG | 0.457331 | tig0034928:-5515 | Msa1453880:intergenic |
| TAATCTGCCTCCTGTGCTGC+TGG | 0.460759 | tig0034928:-4310 | Msa1453880:intergenic |
| TACTGCAGATACCATACAAC+CGG | 0.462972 | tig0034928:+4779 | Msa1453880:CDS |
| TATCTTGTAAAGCAAATTTG+CGG | 0.468505 | tig0034928:-4920 | Msa1453880:intergenic |
| ACACACTTAGAACCATTCTT+CGG | 0.470968 | tig0034928:+5924 | Msa1453880:CDS |
| TACTCTAATGAATTTGGCAC+AGG | 0.475487 | tig0034928:+5556 | Msa1453880:CDS |
| GAGCAGAACCTTAAAACAAA+AGG | 0.476087 | tig0034928:+4828 | Msa1453880:CDS |
| AGATGGTAAAGCCGGTTGTA+TGG | 0.476197 | tig0034928:-4790 | Msa1453880:intergenic |
| ATATTCTGCTAGTTATAAAA+CGG | 0.477346 | tig0034928:+4281 | Msa1453880:CDS |
| CTTTCAGACAATGTGCTTGG+CGG | 0.477972 | tig0034928:+5287 | Msa1453880:CDS |
| CTTTGGTCCATTTATGCCGC+TGG | 0.478929 | tig0034928:+5209 | Msa1453880:CDS |
| TTAAGTATGGAAGCTATCAT+TGG | 0.479826 | tig0034928:-3678 | Msa1453880:intergenic |
| TCAAACATCGTGTAATATAT+GGG | 0.482088 | tig0034928:+6143 | Msa1453880:three_prime_UTR |
| TGCTGCATCTGAGATGTTGA+AGG | 0.483764 | tig0034928:+2212 | Msa1453880:CDS |
| GAGTTGCGAGTTTCATTCAA+TGG | 0.487874 | tig0034928:+6310 | Msa1453880:three_prime_UTR |
| GATGTTTCCAAAATTAGAAA+AGG | 0.489328 | tig0034928:+3404 | Msa1453880:CDS |
| TATATAAAATAGAGGCAGTA+AGG | 0.494900 | tig0034928:-5959 | Msa1453880:intergenic |
| TTTGGCACTATGATAGTCCA+TGG | 0.495001 | tig0034928:+4231 | Msa1453880:CDS |
| GTATAATAAGGGCACGCTAA+AGG | 0.495311 | tig0034928:-6011 | Msa1453880:intergenic |
| TTATCCTCAAGCATTGGAGC+TGG | 0.496771 | tig0034928:-1294 | Msa1453880:intergenic |
| AAGGCAAGTCAGGGCTTCAA+TGG | 0.500470 | tig0034928:+3428 | Msa1453880:CDS |
| GGCACTTATCGAGCACAAGC+TGG | 0.503308 | tig0034928:+4849 | Msa1453880:CDS |
| TGTCGCCCTTAAGAATGGTA+TGG | 0.505260 | tig0034928:-5243 | Msa1453880:intergenic |
| TTGAATAGTTCGCTGCTCCT+GGG | 0.505519 | tig0034928:-5891 | Msa1453880:intergenic |
| ACTCTTGCTCCAGCTGCTGC+AGG | 0.506295 | tig0034928:+3465 | Msa1453880:CDS |
| TTCAACATCTCAGATGCAGC+AGG | 0.512228 | tig0034928:-2210 | Msa1453880:intergenic |
| CTTGGGGATATATAAAATAG+AGG | 0.514473 | tig0034928:-5967 | Msa1453880:intergenic |
| GAAGCTGCAAAGGGTGGATG+AGG | 0.516169 | tig0034928:+3788 | Msa1453880:CDS |
| AGTGCCCATACCATTCTTAA+GGG | 0.529500 | tig0034928:+5238 | Msa1453880:CDS |
| ATATCTGTCGCCCTTAAGAA+TGG | 0.529872 | tig0034928:-5248 | Msa1453880:intergenic |
| CGCCAAGCACATTGTCTGAA+AGG | 0.532213 | tig0034928:-5286 | Msa1453880:intergenic |
| TATAATCTACAACCGAAGAA+TGG | 0.533313 | tig0034928:-5936 | Msa1453880:intergenic |
| AATCTTTGGCAAATGCTTGG+AGG | 0.537967 | tig0034928:-5521 | Msa1453880:intergenic |
| GGATGCACTGATGATCTTGG+AGG | 0.538663 | tig0034928:-140 | Msa1453880:intergenic |
| GAACTACGAGGAAGCTGCAA+AGG | 0.539936 | tig0034928:+3778 | Msa1453880:CDS |
| TGGCGATGGGCAGTCCAAGA+AGG | 0.540373 | tig0034928:+5367 | Msa1453880:CDS |
| TATCAAATGTTGTAGTCTGG+TGG | 0.545219 | tig0034928:+6219 | Msa1453880:three_prime_UTR |
| ACGGCTTTCACCAGCAGCAC+AGG | 0.548696 | tig0034928:+4300 | Msa1453880:CDS |
| TTGGCACTATGATAGTCCAT+GGG | 0.549960 | tig0034928:+4232 | Msa1453880:CDS |
| TTCCAAAATTAGAAAAGGCA+AGG | 0.550226 | tig0034928:+3409 | Msa1453880:CDS |
| GTGTAATATATGGGTTTAGT+CGG | 0.551444 | tig0034928:+6152 | Msa1453880:three_prime_UTR |
| TCGTGTTAAATAACACAAGA+TGG | 0.553197 | tig0034928:+6274 | Msa1453880:three_prime_UTR |
| TTTAAGTTACTAACCCTCAT+CGG | 0.555208 | tig0034928:-161 | Msa1453880:intergenic |
| AGGGTTGGGAGTCTAAAAGT+TGG | 0.557170 | tig0034928:+4720 | Msa1453880:intron |
| GATGCAGCAGGGCGGAGTCG+AGG | 0.558777 | tig0034928:-2198 | Msa1453880:intergenic |
| CCTATGTTCTGAGGTCTGGA+TGG | 0.558848 | tig0034928:-3723 | Msa1453880:intergenic |
| TTACTAACAGATGGTAAAGC+CGG | 0.561040 | tig0034928:-4798 | Msa1453880:intergenic |
| AGGACCAGATCCTCTAAAAG+AGG | 0.561085 | tig0034928:-4757 | Msa1453880:intergenic |
| GTCGCCCTTAAGAATGGTAT+GGG | 0.562963 | tig0034928:-5242 | Msa1453880:intergenic |
| GGCGATGGGCAGTCCAAGAA+GGG | 0.563004 | tig0034928:+5368 | Msa1453880:CDS |
| ATCATCAGTGCATCCGATGA+GGG | 0.569197 | tig0034928:+148 | Msa1453880:CDS |
| TGGTCTTAAATTCATCCCCA+TGG | 0.572008 | tig0034928:-4248 | Msa1453880:intergenic |
| GGAGGCAGATTATCTGACCC+TGG | 0.578891 | tig0034928:+4321 | Msa1453880:CDS |
| CCATCCAGACCTCAGAACAT+AGG | 0.581341 | tig0034928:+3723 | Msa1453880:CDS |
| TTACGAAGATATGCCACTAC+AGG | 0.582634 | tig0034928:+5856 | Msa1453880:CDS |
| TCTGTTGAATTACTAACAGA+TGG | 0.583385 | tig0034928:-4807 | Msa1453880:intergenic |
| AAGCATTGGAGCTGGTTCGA+TGG | 0.585476 | tig0034928:-1286 | Msa1453880:intergenic |
| GGTTATGTCAACTTATCTTG+GGG | 0.589610 | tig0034928:-5983 | Msa1453880:intergenic |
| ACAGGAGTTGCAAGCAACCC+AGG | 0.590070 | tig0034928:+5874 | Msa1453880:CDS |
| TCCATACTTAATGACGAGTA+CGG | 0.593446 | tig0034928:+3690 | Msa1453880:CDS |
| GGTTGTATGGTATCTGCAGT+AGG | 0.595568 | tig0034928:-4777 | Msa1453880:intergenic |
| TCCTCAGCGCCTATGTTCTG+AGG | 0.598838 | tig0034928:-3732 | Msa1453880:intergenic |
| ATTCATTAGAGTAGAACTTG+AGG | 0.602928 | tig0034928:-5546 | Msa1453880:intergenic |
| GTTGCTTGCAACTCCTGTAG+TGG | 0.603870 | tig0034928:-5869 | Msa1453880:intergenic |
| AACTACGAGGAAGCTGCAAA+GGG | 0.604003 | tig0034928:+3779 | Msa1453880:CDS |
| TCAGAACATAGGCGCTGAGG+AGG | 0.606282 | tig0034928:+3734 | Msa1453880:CDS |
| AGAAAAGGCAAGGCAAGTCA+GGG | 0.608181 | tig0034928:+3419 | Msa1453880:CDS |
| TACGAGGAAGCTGCAAAGGG+TGG | 0.614805 | tig0034928:+3782 | Msa1453880:CDS |
| CGAACCAGCTCCAATGCTTG+AGG | 0.615554 | tig0034928:+1290 | Msa1453880:CDS |
| GAGGCAGATTATCTGACCCT+GGG | 0.619258 | tig0034928:+4322 | Msa1453880:CDS |
| GATCATCAGTGCATCCGATG+AGG | 0.636637 | tig0034928:+147 | Msa1453880:CDS |
| GCTTTCACCAGCAGCACAGG+AGG | 0.638460 | tig0034928:+4303 | Msa1453880:CDS |
| GCAGCTTATATCTCATCACA+TGG | 0.649977 | tig0034928:+3756 | Msa1453880:CDS |
| ACCTCAGAACATAGGCGCTG+AGG | 0.653126 | tig0034928:+3731 | Msa1453880:CDS |
| GATGAGGTTGACAATAGTGA+AGG | 0.653496 | tig0034928:+3804 | Msa1453880:CDS |
| CGATGATACTTACATATCAG+TGG | 0.655701 | tig0034928:+6033 | Msa1453880:three_prime_UTR |
| TCAACATCTCAGATGCAGCA+GGG | 0.659565 | tig0034928:-2209 | Msa1453880:intergenic |
| CAGTCCAAGAAGGGTCGCAG+AGG | 0.671659 | tig0034928:+5377 | Msa1453880:CDS |
| GGGTCGCAGAGGAATAAATG+AGG | 0.673661 | tig0034928:+5388 | Msa1453880:CDS |
| TGTTAAATAACACAAGATGG+AGG | 0.679062 | tig0034928:+6277 | Msa1453880:three_prime_UTR |
| AGCAGAATATGTATCCTGTG+TGG | 0.695009 | tig0034928:-4268 | Msa1453880:intergenic |
| TGGCACTATGATAGTCCATG+GGG | 0.703159 | tig0034928:+4233 | Msa1453880:CDS |
| TATGGGCACTGTATTACCAG+CGG | 0.715452 | tig0034928:-5225 | Msa1453880:intergenic |
| GGATGAATTTAAGACCACAC+AGG | 0.733135 | tig0034928:+4254 | Msa1453880:CDS |
| GGCATGCAACAGGATACAAG+TGG | 0.734996 | tig0034928:+5308 | Msa1453880:CDS |
| ACATCTCAGATGCAGCAGGG+CGG | 0.738126 | tig0034928:-2206 | Msa1453880:intergenic |
| TCTCATCACATGGAACTACG+AGG | 0.776372 | tig0034928:+3766 | Msa1453880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATTATAATACCAAAATA+GGG | - | tig0034928:1058-1077 | Msa1453880:intergenic | 10.0% |
| !! | ATATATTATAATACCAAAAT+AGG | - | tig0034928:1059-1078 | Msa1453880:intergenic | 10.0% |
| !!! | TTTTGGTATTATAATATATA+AGG | + | tig0034928:1060-1079 | Msa1453880:intron | 10.0% |
| !! | ATATATATATATATAGCATA+TGG | - | tig0034928:1447-1466 | Msa1453880:intergenic | 10.0% |
| !!! | TTGTTTTTATCTTTTTTTAA+AGG | + | tig0034928:1486-1505 | Msa1453880:intron | 10.0% |
| !!! | ACTTGTATTTTTTAAATATT+GGG | - | tig0034928:1916-1935 | Msa1453880:intergenic | 10.0% |
| !!! | AACTTGTATTTTTTAAATAT+TGG | - | tig0034928:1917-1936 | Msa1453880:intergenic | 10.0% |
| !!! | AAAGTAAATTTGTTTATATT+GGG | - | tig0034928:2969-2988 | Msa1453880:intergenic | 10.0% |
| !!! | AAAAGTAAATTTGTTTATAT+TGG | - | tig0034928:2970-2989 | Msa1453880:intergenic | 10.0% |
| !! | AAAAATTACTTAAGAAAACA+GGG | - | tig0034928:239-258 | Msa1453880:intergenic | 15.0% |
| !! | TAAAAATTACTTAAGAAAAC+AGG | - | tig0034928:240-259 | Msa1453880:intergenic | 15.0% |
| !!! | TTTCTTAAGTAATTTTTAAC+TGG | + | tig0034928:242-261 | Msa1453880:intron | 15.0% |
| !! | ATAAGGAAATATTGAAATTA+TGG | + | tig0034928:1077-1096 | Msa1453880:intron | 15.0% |
| !!! | TTTTTGTAATTGGATATTTT+TGG | + | tig0034928:1180-1199 | Msa1453880:intron | 15.0% |
| !!! | TTTTGTAATTGGATATTTTT+GGG | + | tig0034928:1181-1200 | Msa1453880:intron | 15.0% |
| !!! | AAATTTGATTTTTCTTTTGT+AGG | + | tig0034928:2130-2149 | Msa1453880:intron | 15.0% |
| !!! | AAATATAATATAGTCTTAGT+TGG | - | tig0034928:2598-2617 | Msa1453880:intergenic | 15.0% |
| !! | TTAAGAATATTTATTACAGA+CGG | - | tig0034928:3648-3667 | Msa1453880:intergenic | 15.0% |
| !! | AATAAATATTCTTAATCTGA+AGG | + | tig0034928:3653-3672 | Msa1453880:intron | 15.0% |
| !! | TATTTCTTATTGTTACATAA+AGG | + | tig0034928:3883-3902 | Msa1453880:intron | 15.0% |
| !! | AATTTCACTTTATAGATAAT+TGG | + | tig0034928:3964-3983 | Msa1453880:intron | 15.0% |
| !! | ATTTCACTTTATAGATAATT+GGG | + | tig0034928:3965-3984 | Msa1453880:intron | 15.0% |
| !!! | CCAATTTTTTTGAAAAATAT+AGG | - | tig0034928:4555-4574 | Msa1453880:intergenic | 15.0% |
| !!! | CCTATATTTTTCAAAAAAAT+TGG | + | tig0034928:4552-4571 | Msa1453880:intron | 15.0% |
| !! | AAACCTGTTAAATTAATTAT+GGG | - | tig0034928:4581-4600 | Msa1453880:intergenic | 15.0% |
| !! | AAAACCTGTTAAATTAATTA+TGG | - | tig0034928:4582-4601 | Msa1453880:intergenic | 15.0% |
| !! | ATAGAAAAAAATAAGTAAAC+AGG | - | tig0034928:5180-5199 | Msa1453880:intergenic | 15.0% |
| !!! | ATTGTTTTACTTGTTATATT+AGG | + | tig0034928:5831-5850 | Msa1453880:intron | 15.0% |
| !!! | TATGTAAATATTTTGTATCT+AGG | + | tig0034928:6189-6208 | Msa1453880:three_prime_UTR | 15.0% |
| !!! | CTTAAAACTTTGATTTTTAC+TGG | + | tig0034928:178-197 | Msa1453880:intron | 20.0% |
| !! | AAAATTACTTAAGAAAACAG+GGG | - | tig0034928:238-257 | Msa1453880:intergenic | 20.0% |
| !! | AGAAAATTTGATCTTTGTAT+AGG | + | tig0034928:343-362 | Msa1453880:intron | 20.0% |
| !! | TTTATCTATTCTTTGTAACA+AGG | - | tig0034928:490-509 | Msa1453880:intergenic | 20.0% |
| !! | TAATTAGTTATGAATGAAAG+AGG | + | tig0034928:724-743 | Msa1453880:intron | 20.0% |
| !! | TGAAAGGAAATACATTATAT+AGG | + | tig0034928:931-950 | Msa1453880:intron | 20.0% |
| !!! | TATTTGGTTTACTAATTCAA+AGG | + | tig0034928:1414-1433 | Msa1453880:intron | 20.0% |
| !!! | GAAATGATTTTGTTAAATCA+AGG | - | tig0034928:1635-1654 | Msa1453880:intergenic | 20.0% |
| !! | ACAAAATCTCATATATACAT+AGG | + | tig0034928:1727-1746 | Msa1453880:intron | 20.0% |
| !! | TGATAAGAAATAAGAATACA+AGG | + | tig0034928:1806-1825 | Msa1453880:intron | 20.0% |
| !! | GAAGAAAATTACAATGAATT+TGG | - | tig0034928:1865-1884 | Msa1453880:intergenic | 20.0% |
| !! | TTAAATCGAAGTATATAGTA+AGG | - | tig0034928:2437-2456 | Msa1453880:intergenic | 20.0% |
| !!! | TTCTTAAATTGTTGTTAAGA+AGG | + | tig0034928:2478-2497 | Msa1453880:intron | 20.0% |
| !!! | TAAATTTGTTTATATTGGGA+AGG | - | tig0034928:2965-2984 | Msa1453880:intergenic | 20.0% |
| !!! | TATAAAATTTTAAACTACCG+TGG | + | tig0034928:3257-3276 | Msa1453880:intron | 20.0% |
| !!! | ATTTTTCAAAAAATTTGTGC+TGG | - | tig0034928:3365-3384 | Msa1453880:intergenic | 20.0% |
| !!! | AGCACAAATTTTTTGAAAAA+TGG | + | tig0034928:3364-3383 | Msa1453880:intron | 20.0% |
| !!! | TTTTTTGAAAAATGGAAAGT+TGG | + | tig0034928:3372-3391 | Msa1453880:CDS | 20.0% |
| !!! | AACTGAATTTTAATCTTTGT+TGG | + | tig0034928:4023-4042 | Msa1453880:intron | 20.0% |
| !! | TATTATGCATCGTAATTATT+TGG | + | tig0034928:4185-4204 | Msa1453880:intron | 20.0% |
| !!! | TTATTTGGAATTTGGTATAT+TGG | + | tig0034928:4200-4219 | Msa1453880:intron | 20.0% |
| !! | ATATTCTGCTAGTTATAAAA+CGG | + | tig0034928:4281-4300 | Msa1453880:CDS | 20.0% |
| !! | GTTTATCATGTAAAAATCTA+AGG | - | tig0034928:4383-4402 | Msa1453880:intergenic | 20.0% |
| !!! | TATTTAAAGCCATTAAATAC+AGG | - | tig0034928:4466-4485 | Msa1453880:intergenic | 20.0% |
| !! | AAGAAATACGAAATTTACAT+AGG | - | tig0034928:5805-5824 | Msa1453880:intergenic | 20.0% |
| !! | TAAGTATCATCGTATAATAA+GGG | - | tig0034928:6025-6044 | Msa1453880:intergenic | 20.0% |
| !!! | TGTTTTTGTTTTTGTTTCTT+AGG | + | tig0034928:6071-6090 | Msa1453880:three_prime_UTR | 20.0% |
| !! | AACATGTTAGTCAATTTGTT+GGG | + | tig0034928:320-339 | Msa1453880:intron | 25.0% |
| ! | TTTCTATCACTCTAATAACA+CGG | - | tig0034928:460-479 | Msa1453880:intergenic | 25.0% |
| ! | ATAAAGTTCTGTCAATTGTA+AGG | + | tig0034928:505-524 | Msa1453880:intron | 25.0% |
| ! | TTGTCAATAAATAAGCAGAA+GGG | - | tig0034928:600-619 | Msa1453880:intergenic | 25.0% |
| ! | AAGGGAATAATTAGAGAAAT+CGG | - | tig0034928:628-647 | Msa1453880:intergenic | 25.0% |
| !! | ATTTGTTAGTTAAAGGAGTT+CGG | - | tig0034928:679-698 | Msa1453880:intergenic | 25.0% |
| !!! | CTGATAGATTTGTTAGTTAA+AGG | - | tig0034928:686-705 | Msa1453880:intergenic | 25.0% |
| !!! | AATCTATCAGAGTTTTTTGA+TGG | + | tig0034928:696-715 | Msa1453880:intron | 25.0% |
| !!! | GTTATCTTTTTTTTTGCGAT+AGG | + | tig0034928:789-808 | Msa1453880:intron | 25.0% |
| ! | TTTGAAGAAAACATCTACTT+CGG | + | tig0034928:1025-1044 | Msa1453880:intron | 25.0% |
| ! | CTAGAATAACATTTGTTTGA+AGG | + | tig0034928:1124-1143 | Msa1453880:intron | 25.0% |
| ! | TTTAAAGAATTAAAAACCCG+TGG | - | tig0034928:1154-1173 | Msa1453880:intergenic | 25.0% |
| ! | ATCATGAATAAAACCTACAA+AGG | - | tig0034928:1264-1283 | Msa1453880:intergenic | 25.0% |
| ! | AAGAAATAAGAATACAAGGT+TGG | + | tig0034928:1810-1829 | Msa1453880:intron | 25.0% |
| ! | TCTTTGTGTAATGTATATGA+TGG | + | tig0034928:2100-2119 | Msa1453880:intron | 25.0% |
| ! | AATAGTTACTGTAAATGTAG+AGG | + | tig0034928:2347-2366 | Msa1453880:intron | 25.0% |
| ! | TTAACCAACTGATATATTAG+TGG | - | tig0034928:2382-2401 | Msa1453880:intergenic | 25.0% |
| !!! | TTTATTTTTATGTGCTTCCA+AGG | + | tig0034928:2550-2569 | Msa1453880:intron | 25.0% |
| ! | AGATCCAAGATAAAAAGATA+AGG | + | tig0034928:2668-2687 | Msa1453880:intron | 25.0% |
| ! | GATCCAAGATAAAAAGATAA+GGG | + | tig0034928:2669-2688 | Msa1453880:intron | 25.0% |
| ! | GATTTGTGAAAGATATAACA+GGG | - | tig0034928:2857-2876 | Msa1453880:intergenic | 25.0% |
| !! | TGATTTGTGAAAGATATAAC+AGG | - | tig0034928:2858-2877 | Msa1453880:intergenic | 25.0% |
| ! | ACAAATCAATGAAAATCTTG+TGG | + | tig0034928:2870-2889 | Msa1453880:intron | 25.0% |
| ! | CTAAATACTAATTACAGAGA+CGG | - | tig0034928:2928-2947 | Msa1453880:intergenic | 25.0% |
| !!! | TAGTATTTAGCTTTCATAGT+TGG | + | tig0034928:2938-2957 | Msa1453880:intron | 25.0% |
| ! | GATGTTTCCAAAATTAGAAA+AGG | + | tig0034928:3404-3423 | Msa1453880:CDS | 25.0% |
| ! | AATGAGGTTTGAAAATAAAG+TGG | + | tig0034928:3934-3953 | Msa1453880:intron | 25.0% |
| ! | ATGAGGTTTGAAAATAAAGT+GGG | + | tig0034928:3935-3954 | Msa1453880:intron | 25.0% |
| ! | AGATTAAAATTCAGTTCAAC+CGG | - | tig0034928:4019-4038 | Msa1453880:intergenic | 25.0% |
| !! | CATCGTAATTATTTGGAATT+TGG | + | tig0034928:4192-4211 | Msa1453880:intron | 25.0% |
| ! | ATTCATTGTTAGAGTTAAAC+AGG | - | tig0034928:4358-4377 | Msa1453880:intergenic | 25.0% |
| ! | GCTCTAACAAAATTTATGAA+TGG | - | tig0034928:4441-4460 | Msa1453880:intergenic | 25.0% |
| !!! | TAATGGCTTTAAATAGAGAT+AGG | + | tig0034928:4471-4490 | Msa1453880:intron | 25.0% |
| ! | CAACCCATAATTAATTTAAC+AGG | + | tig0034928:4575-4594 | Msa1453880:intron | 25.0% |
| !! | TTCTTTTGTGGATACATTTT+AGG | + | tig0034928:4700-4719 | Msa1453880:intron | 25.0% |
| !! | TCTTTTGTGGATACATTTTA+GGG | + | tig0034928:4701-4720 | Msa1453880:intron | 25.0% |
| ! | TATCTTGTAAAGCAAATTTG+CGG | - | tig0034928:4923-4942 | Msa1453880:intergenic | 25.0% |
| !! | CAAATTTGCTTTACAAGATA+AGG | + | tig0034928:4923-4942 | Msa1453880:CDS | 25.0% |
| ! | TACGTGAAAATTATACTTGA+CGG | - | tig0034928:4978-4997 | Msa1453880:intergenic | 25.0% |
| ! | AGTATACTTACAAATCACAA+AGG | - | tig0034928:5058-5077 | Msa1453880:intergenic | 25.0% |
| !!! | TTTTCTATCTTTTTCAGCTT+TGG | + | tig0034928:5192-5211 | Msa1453880:intron | 25.0% |
| ! | AAGTTCTACTCTAATGAATT+TGG | + | tig0034928:5550-5569 | Msa1453880:CDS | 25.0% |
| ! | ATTCTTTATTGACACAAGTA+GGG | - | tig0034928:5720-5739 | Msa1453880:intergenic | 25.0% |
| ! | TATTCTTTATTGACACAAGT+AGG | - | tig0034928:5721-5740 | Msa1453880:intergenic | 25.0% |
| ! | TTGTGTCAATAAAGAATACT+GGG | + | tig0034928:5723-5742 | Msa1453880:intron | 25.0% |
| ! | TATATAAAATAGAGGCAGTA+AGG | - | tig0034928:5962-5981 | Msa1453880:intergenic | 25.0% |
| ! | GTAAGTATCATCGTATAATA+AGG | - | tig0034928:6026-6045 | Msa1453880:intergenic | 25.0% |
| ! | TCAAACATCGTGTAATATAT+GGG | + | tig0034928:6143-6162 | Msa1453880:three_prime_UTR | 25.0% |
| !! | TTTTATCAAATGTTGTAGTC+TGG | + | tig0034928:6216-6235 | Msa1453880:three_prime_UTR | 25.0% |
| ! | TTTAAGTTACTAACCCTCAT+CGG | - | tig0034928:164-183 | Msa1453880:intergenic | 30.0% |
| AATTGACTAACATGTTGTAG+TGG | - | tig0034928:316-335 | Msa1453880:intergenic | 30.0% | |
| CAACATGTTAGTCAATTTGT+TGG | + | tig0034928:319-338 | Msa1453880:intron | 30.0% | |
| GATCTTTGTATAGGTGAATT+AGG | + | tig0034928:352-371 | Msa1453880:intron | 30.0% | |
| TTTGTATAGGTGAATTAGGA+GGG | + | tig0034928:356-375 | Msa1453880:intron | 30.0% | |
| TTCTATCACTCTAATAACAC+GGG | - | tig0034928:459-478 | Msa1453880:intergenic | 30.0% | |
| TTATTAGAGTGATAGAAACC+TGG | + | tig0034928:462-481 | Msa1453880:intron | 30.0% | |
| GTTGTCAATAAATAAGCAGA+AGG | - | tig0034928:601-620 | Msa1453880:intergenic | 30.0% | |
| AGGGAATAATTAGAGAAATC+GGG | - | tig0034928:627-646 | Msa1453880:intergenic | 30.0% | |
| TTTGTTAGTTAAAGGAGTTC+GGG | - | tig0034928:678-697 | Msa1453880:intergenic | 30.0% | |
| TATGTCAGAATTCAGACTTA+TGG | + | tig0034928:761-780 | Msa1453880:intron | 30.0% | |
| ! | TTTTCACAGCAAGGAAAATT+AGG | - | tig0034928:859-878 | Msa1453880:intergenic | 30.0% |
| GCTGTATGAAAAGTTTCTTA+AGG | + | tig0034928:882-901 | Msa1453880:intron | 30.0% | |
| TTTGTGAGAATCAATGTGAA+AGG | + | tig0034928:915-934 | Msa1453880:intron | 30.0% | |
| ! | AGATCATAGTTTTCCTTTTG+AGG | + | tig0034928:1211-1230 | Msa1453880:intron | 30.0% |
| ! | AAGTTGTGTTTTTCCTTTGT+AGG | + | tig0034928:1248-1267 | Msa1453880:intron | 30.0% |
| ! | TTTTCTTTATCCTCAAGCAT+TGG | - | tig0034928:1303-1322 | Msa1453880:intergenic | 30.0% |
| TGCTTGAGGATAAAGAAAAA+TGG | + | tig0034928:1304-1323 | Msa1453880:CDS | 30.0% | |
| TAATGATCCATGATGCTATT+TGG | + | tig0034928:1398-1417 | Msa1453880:intron | 30.0% | |
| TAGTAAACCAAATAGCATCA+TGG | - | tig0034928:1408-1427 | Msa1453880:intergenic | 30.0% | |
| TAGTAAATGCACTGTAAACT+CGG | - | tig0034928:1517-1536 | Msa1453880:intergenic | 30.0% | |
| ! | TCTTGCGAACTTTTGATAAA+TGG | + | tig0034928:1556-1575 | Msa1453880:intron | 30.0% |
| ! | ATTTGGTGGCATCTTAATAT+GGG | - | tig0034928:1584-1603 | Msa1453880:intergenic | 30.0% |
| ! | AATTTGGTGGCATCTTAATA+TGG | - | tig0034928:1585-1604 | Msa1453880:intergenic | 30.0% |
| CTATACACGTGGTTTAAATT+TGG | - | tig0034928:1601-1620 | Msa1453880:intergenic | 30.0% | |
| GTATGCTCAGTTATATGTTT+CGG | + | tig0034928:2234-2253 | Msa1453880:intron | 30.0% | |
| TTTAGCATTCAAATCCGAAT+TGG | + | tig0034928:2813-2832 | Msa1453880:intron | 30.0% | |
| !! | TTGAGAGTTCTAAACCAATT+CGG | - | tig0034928:2830-2849 | Msa1453880:intergenic | 30.0% |
| ! | CTGATTATCTAAAATGACCA+TGG | + | tig0034928:3151-3170 | Msa1453880:intron | 30.0% |
| GACCATGGTAATAATTTAAG+TGG | + | tig0034928:3166-3185 | Msa1453880:intron | 30.0% | |
| CACCACTTAAATTATTACCA+TGG | - | tig0034928:3171-3190 | Msa1453880:intergenic | 30.0% | |
| CATGGTAATAATTTAAGTGG+TGG | + | tig0034928:3169-3188 | Msa1453880:intron | 30.0% | |
| !! | TCACACATGAGCTTTTATTT+TGG | + | tig0034928:3200-3219 | Msa1453880:intron | 30.0% |
| TTAGAGTTAAACACAAGCAA+TGG | - | tig0034928:3226-3245 | Msa1453880:intergenic | 30.0% | |
| AACTTGATAAGCATAAACCA+CGG | - | tig0034928:3277-3296 | Msa1453880:intergenic | 30.0% | |
| ! | ATGTATTTTCTTCAACCGTT+CGG | + | tig0034928:3306-3325 | Msa1453880:intron | 30.0% |
| CAAAAAAGAACTTGACTCAA+TGG | - | tig0034928:3337-3356 | Msa1453880:intergenic | 30.0% | |
| !!! | CATTGAGTCAAGTTCTTTTT+TGG | + | tig0034928:3335-3354 | Msa1453880:intron | 30.0% |
| TTCCAAAATTAGAAAAGGCA+AGG | + | tig0034928:3409-3428 | Msa1453880:CDS | 30.0% | |
| ACAAACTAAAAGAGAGAAGA+GGG | - | tig0034928:3521-3540 | Msa1453880:intergenic | 30.0% | |
| TTAAGTATGGAAGCTATCAT+TGG | - | tig0034928:3681-3700 | Msa1453880:intergenic | 30.0% | |
| CCTTGACAATAACTAAAATC+AGG | - | tig0034928:3858-3877 | Msa1453880:intergenic | 30.0% | |
| !!! | CCTGATTTTAGTTATTGTCA+AGG | + | tig0034928:3855-3874 | Msa1453880:intron | 30.0% |
| GATTAAAATTCAGTTCAACC+GGG | - | tig0034928:4018-4037 | Msa1453880:intergenic | 30.0% | |
| TTAAAGCCATTAAATACAGG+TGG | - | tig0034928:4463-4482 | Msa1453880:intergenic | 30.0% | |
| TTGAAAAATATAGGCAGTAG+TGG | - | tig0034928:4546-4565 | Msa1453880:intergenic | 30.0% | |
| ! | CACATTTTACAAGTTTGCAA+AGG | - | tig0034928:4606-4625 | Msa1453880:intergenic | 30.0% |
| GGAATGAAAAGGAAAAAAGA+GGG | - | tig0034928:4654-4673 | Msa1453880:intergenic | 30.0% | |
| AGGAATGAAAAGGAAAAAAG+AGG | - | tig0034928:4655-4674 | Msa1453880:intergenic | 30.0% | |
| AAACTACATTAGAACACATG+AGG | - | tig0034928:4675-4694 | Msa1453880:intergenic | 30.0% | |
| ! | GTAGTTTTTGCTTTCTTTTG+TGG | + | tig0034928:4688-4707 | Msa1453880:intron | 30.0% |
| TCTGTTGAATTACTAACAGA+TGG | - | tig0034928:4810-4829 | Msa1453880:intergenic | 30.0% | |
| !!! | GATAAGTGCCTTTTGTTTTA+AGG | - | tig0034928:4839-4858 | Msa1453880:intergenic | 30.0% |
| AGTAAACAGGTGATAAATCT+TGG | - | tig0034928:5167-5186 | Msa1453880:intergenic | 30.0% | |
| ATTCATTAGAGTAGAACTTG+AGG | - | tig0034928:5549-5568 | Msa1453880:intergenic | 30.0% | |
| AATGTGCAAATTATCGTAGT+AGG | + | tig0034928:5646-5665 | Msa1453880:intron | 30.0% | |
| CTTGTGTCAATAAAGAATAC+TGG | + | tig0034928:5722-5741 | Msa1453880:intron | 30.0% | |
| TGTGTCAATAAAGAATACTG+GGG | + | tig0034928:5724-5743 | Msa1453880:intron | 30.0% | |
| AAAGGAATCATCATATCAGA+AGG | - | tig0034928:5755-5774 | Msa1453880:intergenic | 30.0% | |
| TATAATCTACAACCGAAGAA+TGG | - | tig0034928:5939-5958 | Msa1453880:intergenic | 30.0% | |
| CTTGGGGATATATAAAATAG+AGG | - | tig0034928:5970-5989 | Msa1453880:intergenic | 30.0% | |
| TGGTTATGTCAACTTATCTT+GGG | - | tig0034928:5987-6006 | Msa1453880:intergenic | 30.0% | |
| ATGGTTATGTCAACTTATCT+TGG | - | tig0034928:5988-6007 | Msa1453880:intergenic | 30.0% | |
| TATATTACACGATGTTTGAC+TGG | - | tig0034928:6142-6161 | Msa1453880:intergenic | 30.0% | |
| GTCAAACATCGTGTAATATA+TGG | + | tig0034928:6142-6161 | Msa1453880:three_prime_UTR | 30.0% | |
| GTGTAATATATGGGTTTAGT+CGG | + | tig0034928:6152-6171 | Msa1453880:three_prime_UTR | 30.0% | |
| TCGTGTTAAATAACACAAGA+TGG | + | tig0034928:6274-6293 | Msa1453880:three_prime_UTR | 30.0% | |
| TGTTAAATAACACAAGATGG+AGG | + | tig0034928:6277-6296 | Msa1453880:three_prime_UTR | 30.0% | |
| CTTTGTATAGGTGAATTAGG+AGG | + | tig0034928:355-374 | Msa1453880:intron | 35.0% | |
| ACATTTGACATGCAATGAGA+TGG | + | tig0034928:413-432 | Msa1453880:intron | 35.0% | |
| ! | ATTCTTTGTAACAAGGTACC+AGG | - | tig0034928:483-502 | Msa1453880:intergenic | 35.0% |
| ! | TACAGCATATTTTCACAGCA+AGG | - | tig0034928:868-887 | Msa1453880:intergenic | 35.0% |
| ! | ATTTGTTTGAAGGCATACCA+CGG | + | tig0034928:1134-1153 | Msa1453880:intron | 35.0% |
| !!! | ATAGTTTTCCTTTTGAGGTG+AGG | + | tig0034928:1216-1235 | Msa1453880:intron | 35.0% |
| !!! | TAGTTTTCCTTTTGAGGTGA+GGG | + | tig0034928:1217-1236 | Msa1453880:intron | 35.0% |
| ! | TTTGGTGGCATCTTAATATG+GGG | - | tig0034928:1583-1602 | Msa1453880:intergenic | 35.0% |
| TACACGTGGTTTAAATTTGG+TGG | - | tig0034928:1598-1617 | Msa1453880:intergenic | 35.0% | |
| TCTCACTTTAACTATACACG+TGG | - | tig0034928:1612-1631 | Msa1453880:intergenic | 35.0% | |
| ATCAGTTGACCTATGCAATT+TGG | + | tig0034928:1697-1716 | Msa1453880:intron | 35.0% | |
| ATGTGTTAGATTCACAGAAG+AGG | - | tig0034928:1759-1778 | Msa1453880:intergenic | 35.0% | |
| TTTCTGTCTTCTATGTCCAA+TGG | + | tig0034928:1936-1955 | Msa1453880:intron | 35.0% | |
| GTTACTGTAAATGTAGAGGA+AGG | + | tig0034928:2351-2370 | Msa1453880:intron | 35.0% | |
| GTAGCCACTAATATATCAGT+TGG | + | tig0034928:2375-2394 | Msa1453880:intron | 35.0% | |
| GAGAGTTGAGAGAAGAAAAA+TGG | - | tig0034928:2576-2595 | Msa1453880:intergenic | 35.0% | |
| ! | AAAAGCATGCACAAATGTCT+TGG | + | tig0034928:2618-2637 | Msa1453880:intron | 35.0% |
| ! | GAGCCCTTATCTTTTTATCT+TGG | - | tig0034928:2675-2694 | Msa1453880:intergenic | 35.0% |
| ! | GAATTGGTTTAGAACTCTCA+AGG | + | tig0034928:2829-2848 | Msa1453880:intron | 35.0% |
| AACATACTAATATGTGCTGC+AGG | - | tig0034928:3104-3123 | Msa1453880:intergenic | 35.0% | |
| ! | TGCCTTGCCTTTTCTAATTT+TGG | - | tig0034928:3414-3433 | Msa1453880:intergenic | 35.0% |
| GACAAACTAAAAGAGAGAAG+AGG | - | tig0034928:3522-3541 | Msa1453880:intergenic | 35.0% | |
| ACTAATCCAGATAGATGAGA+AGG | - | tig0034928:3591-3610 | Msa1453880:intergenic | 35.0% | |
| ! | TTCTCATCTATCTGGATTAG+TGG | + | tig0034928:3590-3609 | Msa1453880:intron | 35.0% |
| TCCATACTTAATGACGAGTA+CGG | + | tig0034928:3690-3709 | Msa1453880:CDS | 35.0% | |
| ATGTGTTTCACGTTCTATGA+TGG | + | tig0034928:3906-3925 | Msa1453880:intron | 35.0% | |
| TGTGTTTCACGTTCTATGAT+GGG | + | tig0034928:3907-3926 | Msa1453880:intron | 35.0% | |
| ! | TTCTATGATGGGAGAAAATG+AGG | + | tig0034928:3918-3937 | Msa1453880:intron | 35.0% |
| ATCTTTGTTGGACATACTTG+TGG | + | tig0034928:4035-4054 | Msa1453880:intron | 35.0% | |
| TCTTTGTTGGACATACTTGT+GGG | + | tig0034928:4036-4055 | Msa1453880:intron | 35.0% | |
| TTGGAATTTGGTATATTGGC+AGG | + | tig0034928:4204-4223 | Msa1453880:intron | 35.0% | |
| ! | GGTATATTGGCAGGTAATTT+TGG | + | tig0034928:4213-4232 | Msa1453880:intron | 35.0% |
| TTAGAGCCACCTGTATTTAA+TGG | + | tig0034928:4454-4473 | Msa1453880:intron | 35.0% | |
| TATAGGCAGTAGTGGTAAAT+GGG | - | tig0034928:4538-4557 | Msa1453880:intergenic | 35.0% | |
| ATATAGGCAGTAGTGGTAAA+TGG | - | tig0034928:4539-4558 | Msa1453880:intergenic | 35.0% | |
| TGAAAAGGAAAAAAGAGGGA+AGG | - | tig0034928:4650-4669 | Msa1453880:intergenic | 35.0% | |
| AGAACACATGAGGAATGAAA+AGG | - | tig0034928:4665-4684 | Msa1453880:intergenic | 35.0% | |
| !!! | TTGTGGATACATTTTAGGGT+TGG | + | tig0034928:4705-4724 | Msa1453880:intron | 35.0% |
| !!! | TGTGGATACATTTTAGGGTT+GGG | + | tig0034928:4706-4725 | Msa1453880:intron | 35.0% |
| TTACTAACAGATGGTAAAGC+CGG | - | tig0034928:4801-4820 | Msa1453880:intergenic | 35.0% | |
| GAGCAGAACCTTAAAACAAA+AGG | + | tig0034928:4828-4847 | Msa1453880:CDS | 35.0% | |
| AAGCACAATCTTTGCTCAAA+TGG | - | tig0034928:5011-5030 | Msa1453880:intergenic | 35.0% | |
| ! | TGAGCAAAGATTGTGCTTTT+TGG | + | tig0034928:5013-5032 | Msa1453880:intron | 35.0% |
| AGAGCAGAGTACAAAAGATA+AGG | - | tig0034928:5112-5131 | Msa1453880:intergenic | 35.0% | |
| TAGAACTTGAGGTCAATCTT+TGG | - | tig0034928:5538-5557 | Msa1453880:intergenic | 35.0% | |
| TACTCTAATGAATTTGGCAC+AGG | + | tig0034928:5556-5575 | Msa1453880:CDS | 35.0% | |
| ! | CGATAATTTGCACATTGAGT+TGG | - | tig0034928:5642-5661 | Msa1453880:intergenic | 35.0% |
| ACACACTTAGAACCATTCTT+CGG | + | tig0034928:5924-5943 | Msa1453880:CDS | 35.0% | |
| GGTTATGTCAACTTATCTTG+GGG | - | tig0034928:5986-6005 | Msa1453880:intergenic | 35.0% | |
| CGATGATACTTACATATCAG+TGG | + | tig0034928:6033-6052 | Msa1453880:three_prime_UTR | 35.0% | |
| !!! | TTGTGACTAGTTAGTTTTGC+TGG | + | tig0034928:6101-6120 | Msa1453880:three_prime_UTR | 35.0% |
| TATCAAATGTTGTAGTCTGG+TGG | + | tig0034928:6219-6238 | Msa1453880:three_prime_UTR | 35.0% | |
| ! | TTGTAGTCTGGTGGAATTTT+TGG | + | tig0034928:6228-6247 | Msa1453880:three_prime_UTR | 35.0% |
| TTTGACATGCAATGAGATGG+AGG | + | tig0034928:416-435 | Msa1453880:intron | 40.0% | |
| TTGACATGCAATGAGATGGA+GGG | + | tig0034928:417-436 | Msa1453880:intron | 40.0% | |
| TGTTCCCTCCATATGTTCAA+AGG | + | tig0034928:531-550 | Msa1453880:intron | 40.0% | |
| ATGGCCTTTGAACATATGGA+GGG | - | tig0034928:538-557 | Msa1453880:intergenic | 40.0% | |
| AATAAGCAGAAGGGTTGAGA+GGG | - | tig0034928:591-610 | Msa1453880:intergenic | 40.0% | |
| AAATAAGCAGAAGGGTTGAG+AGG | - | tig0034928:592-611 | Msa1453880:intergenic | 40.0% | |
| TTAGTTAGTAGTCGAGGACA+AGG | - | tig0034928:651-670 | Msa1453880:intergenic | 40.0% | |
| ! | TTTGTTTGAAGGCATACCAC+GGG | + | tig0034928:1135-1154 | Msa1453880:intron | 40.0% |
| !!! | AGTTTTCCTTTTGAGGTGAG+GGG | + | tig0034928:1218-1237 | Msa1453880:intron | 40.0% |
| GTTCAGACTCCAAATTGCAT+AGG | - | tig0034928:1709-1728 | Msa1453880:intergenic | 40.0% | |
| GAGTGATGCACTTATACCAT+TGG | - | tig0034928:1955-1974 | Msa1453880:intergenic | 40.0% | |
| ATTGAGACTACTCAACTCTC+AGG | - | tig0034928:2068-2087 | Msa1453880:intergenic | 40.0% | |
| GAGTAGTCTCAATTTCGTGA+CGG | + | tig0034928:2075-2094 | Msa1453880:intron | 40.0% | |
| TGAGAGAAGAAAAATGGCCT+TGG | - | tig0034928:2570-2589 | Msa1453880:intergenic | 40.0% | |
| AAGGGCTCAAAGTTAACTCT+TGG | + | tig0034928:2687-2706 | Msa1453880:intron | 40.0% | |
| AAAGCTCATGTGTGATCGAT+CGG | - | tig0034928:3195-3214 | Msa1453880:intergenic | 40.0% | |
| CTAAAAGAGAGAAGAGGGAT+GGG | - | tig0034928:3516-3535 | Msa1453880:intergenic | 40.0% | |
| ACTAAAAGAGAGAAGAGGGA+TGG | - | tig0034928:3517-3536 | Msa1453880:intergenic | 40.0% | |
| ATTCGTCCTTCTCATCTATC+TGG | + | tig0034928:3582-3601 | Msa1453880:intron | 40.0% | |
| TCCGTACTCGTCATTAAGTA+TGG | - | tig0034928:3694-3713 | Msa1453880:intergenic | 40.0% | |
| GCAGCTTATATCTCATCACA+TGG | + | tig0034928:3756-3775 | Msa1453880:CDS | 40.0% | |
| GATGAGGTTGACAATAGTGA+AGG | + | tig0034928:3804-3823 | Msa1453880:CDS | 40.0% | |
| TACAGATAAGACGCAAGAAC+GGG | - | tig0034928:3834-3853 | Msa1453880:intergenic | 40.0% | |
| CTACAGATAAGACGCAAGAA+CGG | - | tig0034928:3835-3854 | Msa1453880:intergenic | 40.0% | |
| AGATAATTGGGCATACACAG+AGG | + | tig0034928:3977-3996 | Msa1453880:intron | 40.0% | |
| TTTGGCACTATGATAGTCCA+TGG | + | tig0034928:4231-4250 | Msa1453880:CDS | 40.0% | |
| TTGGCACTATGATAGTCCAT+GGG | + | tig0034928:4232-4251 | Msa1453880:CDS | 40.0% | |
| ! | TGGTCTTAAATTCATCCCCA+TGG | - | tig0034928:4251-4270 | Msa1453880:intergenic | 40.0% |
| ! | GGATGAATTTAAGACCACAC+AGG | + | tig0034928:4254-4273 | Msa1453880:CDS | 40.0% |
| AGCAGAATATGTATCCTGTG+TGG | - | tig0034928:4271-4290 | Msa1453880:intergenic | 40.0% | |
| TTATGAATGGCTGTGAAGAG+AGG | - | tig0034928:4428-4447 | Msa1453880:intergenic | 40.0% | |
| ! | TTGAACACTGCCTCTTTTAG+AGG | + | tig0034928:4747-4766 | Msa1453880:CDS | 40.0% |
| TACTGCAGATACCATACAAC+CGG | + | tig0034928:4779-4798 | Msa1453880:CDS | 40.0% | |
| ATGAATGTCTACTGTGAGAC+TGG | + | tig0034928:5138-5157 | Msa1453880:intron | 40.0% | |
| TGTATTACCAGCGGCATAAA+TGG | - | tig0034928:5219-5238 | Msa1453880:intergenic | 40.0% | |
| AGTGCCCATACCATTCTTAA+GGG | + | tig0034928:5238-5257 | Msa1453880:CDS | 40.0% | |
| ATATCTGTCGCCCTTAAGAA+TGG | - | tig0034928:5251-5270 | Msa1453880:intergenic | 40.0% | |
| TTGTCTGAAAGGAGAGCAAT+AGG | - | tig0034928:5278-5297 | Msa1453880:intergenic | 40.0% | |
| !!! | GAAGCATTGCAAGAGCTTTT+TGG | + | tig0034928:5344-5363 | Msa1453880:CDS | 40.0% |
| AATCTTTGGCAAATGCTTGG+AGG | - | tig0034928:5524-5543 | Msa1453880:intergenic | 40.0% | |
| GTCAATCTTTGGCAAATGCT+TGG | - | tig0034928:5527-5546 | Msa1453880:intergenic | 40.0% | |
| TCATAAGATGTACGTCCCTT+CGG | + | tig0034928:5589-5608 | Msa1453880:intron | 40.0% | |
| AAATTGCTGCAAAAGCCGAA+GGG | - | tig0034928:5607-5626 | Msa1453880:intergenic | 40.0% | |
| AAAATTGCTGCAAAAGCCGA+AGG | - | tig0034928:5608-5627 | Msa1453880:intergenic | 40.0% | |
| !! | TGCACATTGAGTTGGAAGAA+AGG | - | tig0034928:5634-5653 | Msa1453880:intergenic | 40.0% |
| CTTTATTGACACAAGTAGGG+TGG | - | tig0034928:5717-5736 | Msa1453880:intergenic | 40.0% | |
| AGTTCCTCTTATGCGTGTAT+TGG | + | tig0034928:5776-5795 | Msa1453880:intron | 40.0% | |
| GAATCCAATACACGCATAAG+AGG | - | tig0034928:5783-5802 | Msa1453880:intergenic | 40.0% | |
| TTACGAAGATATGCCACTAC+AGG | + | tig0034928:5856-5875 | Msa1453880:CDS | 40.0% | |
| ! | GTATAATAAGGGCACGCTAA+AGG | - | tig0034928:6014-6033 | Msa1453880:intergenic | 40.0% |
| GAGTTGCGAGTTTCATTCAA+TGG | + | tig0034928:6310-6329 | Msa1453880:three_prime_UTR | 40.0% | |
| ! | ATCGGATGCACTGATGATCT+TGG | - | tig0034928:146-165 | Msa0056170:intergenic | 45.0% |
| ATCATCAGTGCATCCGATGA+GGG | + | tig0034928:148-167 | Msa1453880:CDS | 45.0% | |
| CATGGCCTTTGAACATATGG+AGG | - | tig0034928:539-558 | Msa1453880:intergenic | 45.0% | |
| CTCCATATGTTCAAAGGCCA+TGG | + | tig0034928:537-556 | Msa1453880:intron | 45.0% | |
| AGCCATGGCCTTTGAACATA+TGG | - | tig0034928:542-561 | Msa1453880:intergenic | 45.0% | |
| CGTCATTTGAAAGAGAGCCA+TGG | - | tig0034928:557-576 | Msa1453880:intergenic | 45.0% | |
| TAGTAGTCGAGGACAAGGAA+GGG | - | tig0034928:646-665 | Msa1453880:intergenic | 45.0% | |
| TTAGTAGTCGAGGACAAGGA+AGG | - | tig0034928:647-666 | Msa1453880:intergenic | 45.0% | |
| ! | GGCTAGTTAGTTAGTAGTCG+AGG | - | tig0034928:657-676 | Msa1453880:intergenic | 45.0% |
| !! | TTCGGTGTGCTTCCCTATTT+TGG | + | tig0034928:1043-1062 | Msa1453880:intron | 45.0% |
| ATAACTCCCCTCACCTCAAA+AGG | - | tig0034928:1227-1246 | Msa1453880:intergenic | 45.0% | |
| !! | TTATCCTCAAGCATTGGAGC+TGG | - | tig0034928:1297-1316 | Msa1453880:intergenic | 45.0% |
| AGCAGTGTGCTTCAAACAGT+TGG | + | tig0034928:1374-1393 | Msa1453880:intron | 45.0% | |
| TCCCAGAGCCAATATCTTGA+TGG | + | tig0034928:2040-2059 | Msa1453880:intron | 45.0% | |
| !! | GCCATCAAGATATTGGCTCT+GGG | - | tig0034928:2044-2063 | Msa1453880:intergenic | 45.0% |
| TCAACATCTCAGATGCAGCA+GGG | - | tig0034928:2212-2231 | Msa1453880:intergenic | 45.0% | |
| TTCAACATCTCAGATGCAGC+AGG | - | tig0034928:2213-2232 | Msa1453880:intergenic | 45.0% | |
| ! | TGCTGCATCTGAGATGTTGA+AGG | + | tig0034928:2212-2231 | Msa1453880:CDS | 45.0% |
| GACTCAATGGAAACACCGAA+CGG | - | tig0034928:3324-3343 | Msa1453880:intergenic | 45.0% | |
| TAGAAAAGGCAAGGCAAGTC+AGG | + | tig0034928:3418-3437 | Msa1453880:CDS | 45.0% | |
| AGAAAAGGCAAGGCAAGTCA+GGG | + | tig0034928:3419-3438 | Msa1453880:CDS | 45.0% | |
| TCTCATCACATGGAACTACG+AGG | + | tig0034928:3766-3785 | Msa1453880:CDS | 45.0% | |
| AACTACGAGGAAGCTGCAAA+GGG | + | tig0034928:3779-3798 | Msa1453880:CDS | 45.0% | |
| TCAGTTCAACCGGGATTTGA+GGG | - | tig0034928:4009-4028 | Msa1453880:intergenic | 45.0% | |
| TTCAGTTCAACCGGGATTTG+AGG | - | tig0034928:4010-4029 | Msa1453880:intergenic | 45.0% | |
| AACTTGAACCCAGCTGTTGT+TGG | + | tig0034928:4059-4078 | Msa1453880:intron | 45.0% | |
| AAACCAGTCCAACAACAGCT+GGG | - | tig0034928:4070-4089 | Msa1453880:intergenic | 45.0% | |
| TGGCACTATGATAGTCCATG+GGG | + | tig0034928:4233-4252 | Msa1453880:CDS | 45.0% | |
| AACAGGCAAGTAAGTACCCA+GGG | - | tig0034928:4341-4360 | Msa1453880:intergenic | 45.0% | |
| AAACAGGCAAGTAAGTACCC+AGG | - | tig0034928:4342-4361 | Msa1453880:intergenic | 45.0% | |
| AGGGTTGGGAGTCTAAAAGT+TGG | + | tig0034928:4720-4739 | Msa1453880:intron | 45.0% | |
| !! | ACTGCCTCTTTTAGAGGATC+TGG | + | tig0034928:4753-4772 | Msa1453880:CDS | 45.0% |
| ! | AGGACCAGATCCTCTAAAAG+AGG | - | tig0034928:4760-4779 | Msa1453880:intergenic | 45.0% |
| GGTTGTATGGTATCTGCAGT+AGG | - | tig0034928:4780-4799 | Msa1453880:intergenic | 45.0% | |
| AGATGGTAAAGCCGGTTGTA+TGG | - | tig0034928:4793-4812 | Msa1453880:intergenic | 45.0% | |
| TATCGAGCACAAGCTGGAAT+TGG | + | tig0034928:4855-4874 | Msa1453880:CDS | 45.0% | |
| ! | TATGGGCACTGTATTACCAG+CGG | - | tig0034928:5228-5247 | Msa1453880:intergenic | 45.0% |
| CAGTGCCCATACCATTCTTA+AGG | + | tig0034928:5237-5256 | Msa1453880:CDS | 45.0% | |
| GTCGCCCTTAAGAATGGTAT+GGG | - | tig0034928:5245-5264 | Msa1453880:intergenic | 45.0% | |
| TGTCGCCCTTAAGAATGGTA+TGG | - | tig0034928:5246-5265 | Msa1453880:intergenic | 45.0% | |
| CTCCTTTCAGACAATGTGCT+TGG | + | tig0034928:5284-5303 | Msa1453880:CDS | 45.0% | |
| CTTTCAGACAATGTGCTTGG+CGG | + | tig0034928:5287-5306 | Msa1453880:CDS | 45.0% | |
| CAACAGGATACAAGTGGAAC+TGG | + | tig0034928:5314-5333 | Msa1453880:CDS | 45.0% | |
| ! | GCATTGCAAGAGCTTTTTGG+TGG | + | tig0034928:5347-5366 | Msa1453880:CDS | 45.0% |
| !!! | AAGAGCTTTTTGGTGGCGAT+GGG | + | tig0034928:5354-5373 | Msa1453880:CDS | 45.0% |
| ATTTGTGCAAATGCGCGTAG+TGG | + | tig0034928:5672-5691 | Msa1453880:intron | 45.0% | |
| ! | CGCGTAGTGGAGAACTATAT+AGG | + | tig0034928:5685-5704 | Msa1453880:intron | 45.0% |
| CACGCATAAGAGGAACTGAA+AGG | - | tig0034928:5773-5792 | Msa1453880:intergenic | 45.0% | |
| TTGAATAGTTCGCTGCTCCT+GGG | - | tig0034928:5894-5913 | Msa1453880:intergenic | 45.0% | |
| TTTGAATAGTTCGCTGCTCC+TGG | - | tig0034928:5895-5914 | Msa1453880:intergenic | 45.0% | |
| ! | AAGGGCACGCTAAAGGAAAA+TGG | - | tig0034928:6007-6026 | Msa1453880:intergenic | 45.0% |
| !!! | TAAATTTTTATTTTTGTAAT+TGG | + | tig0034928:1170-1189 | Msa1453880:intron | 5.0% |
| ! | GGATGCACTGATGATCTTGG+AGG | - | tig0034928:143-162 | Msa0056170:intergenic | 50.0% |
| GATCATCAGTGCATCCGATG+AGG | + | tig0034928:147-166 | Msa1453880:CDS | 50.0% | |
| !! | AAGCATTGGAGCTGGTTCGA+TGG | - | tig0034928:1289-1308 | Msa1453880:intergenic | 50.0% |
| !! | CGCCATCAAGATATTGGCTC+TGG | - | tig0034928:2045-2064 | Msa1453880:intergenic | 50.0% |
| CTCAGGCGCCATCAAGATAT+TGG | - | tig0034928:2051-2070 | Msa1453880:intergenic | 50.0% | |
| AAGGCAAGTCAGGGCTTCAA+TGG | + | tig0034928:3428-3447 | Msa1453880:CDS | 50.0% | |
| ! | CAGGGCTTCAATGGCTTTAC+AGG | + | tig0034928:3437-3456 | Msa1453880:CDS | 50.0% |
| AAAGAGAGAAGAGGGATGGG+AGG | - | tig0034928:3513-3532 | Msa1453880:intergenic | 50.0% | |
| !! | CCTATGTTCTGAGGTCTGGA+TGG | - | tig0034928:3726-3745 | Msa1453880:intergenic | 50.0% |
| CCATCCAGACCTCAGAACAT+AGG | + | tig0034928:3723-3742 | Msa1453880:CDS | 50.0% | |
| GAACTACGAGGAAGCTGCAA+AGG | + | tig0034928:3778-3797 | Msa1453880:CDS | 50.0% | |
| AGGCTGTAACCCTCAAATCC+CGG | + | tig0034928:3997-4016 | Msa1453880:intron | 50.0% | |
| CAAACCAGTCCAACAACAGC+TGG | - | tig0034928:4071-4090 | Msa1453880:intergenic | 50.0% | |
| !! | CTGTTGTTGGACTGGTTTGC+TGG | + | tig0034928:4072-4091 | Msa1453880:intron | 50.0% |
| GAGGCAGATTATCTGACCCT+GGG | + | tig0034928:4322-4341 | Msa1453880:CDS | 50.0% | |
| CTTTGGTCCATTTATGCCGC+TGG | + | tig0034928:5209-5228 | Msa1453880:CDS | 50.0% | |
| CGCCAAGCACATTGTCTGAA+AGG | - | tig0034928:5289-5308 | Msa1453880:intergenic | 50.0% | |
| GGCATGCAACAGGATACAAG+TGG | + | tig0034928:5308-5327 | Msa1453880:CDS | 50.0% | |
| !!! | CAAGAGCTTTTTGGTGGCGA+TGG | + | tig0034928:5353-5372 | Msa1453880:CDS | 50.0% |
| TATTCCTCTGCGACCCTTCT+TGG | - | tig0034928:5384-5403 | Msa1453880:intergenic | 50.0% | |
| GGGTCGCAGAGGAATAAATG+AGG | + | tig0034928:5388-5407 | Msa1453880:CDS | 50.0% | |
| TGGCAAATGCTTGGAGGAAG+TGG | - | tig0034928:5518-5537 | Msa1453880:intergenic | 50.0% | |
| GTTGCTTGCAACTCCTGTAG+TGG | - | tig0034928:5872-5891 | Msa1453880:intergenic | 50.0% | |
| CGAACCAGCTCCAATGCTTG+AGG | + | tig0034928:1290-1309 | Msa1453880:CDS | 55.0% | |
| GGAGTCGAGGTTCTTTGGTC+AGG | - | tig0034928:2188-2207 | Msa1453880:intergenic | 55.0% | |
| ACATCTCAGATGCAGCAGGG+CGG | - | tig0034928:2209-2228 | Msa1453880:intergenic | 55.0% | |
| !! | AGCGCCTATGTTCTGAGGTC+TGG | - | tig0034928:3730-3749 | Msa1453880:intergenic | 55.0% |
| ! | ACCTCAGAACATAGGCGCTG+AGG | + | tig0034928:3731-3750 | Msa1453880:CDS | 55.0% |
| TCCTCAGCGCCTATGTTCTG+AGG | - | tig0034928:3735-3754 | Msa1453880:intergenic | 55.0% | |
| !! | TCAGAACATAGGCGCTGAGG+AGG | + | tig0034928:3734-3753 | Msa1453880:CDS | 55.0% |
| TACGAGGAAGCTGCAAAGGG+TGG | + | tig0034928:3782-3801 | Msa1453880:CDS | 55.0% | |
| GAAGCTGCAAAGGGTGGATG+AGG | + | tig0034928:3788-3807 | Msa1453880:CDS | 55.0% | |
| GAACCCAGCTGTTGTTGGAC+TGG | + | tig0034928:4064-4083 | Msa1453880:intron | 55.0% | |
| TAATCTGCCTCCTGTGCTGC+TGG | - | tig0034928:4313-4332 | Msa1453880:intergenic | 55.0% | |
| GGAGGCAGATTATCTGACCC+TGG | + | tig0034928:4321-4340 | Msa1453880:CDS | 55.0% | |
| GGCACTTATCGAGCACAAGC+TGG | + | tig0034928:4849-4868 | Msa1453880:CDS | 55.0% | |
| ACAGGAGTTGCAAGCAACCC+AGG | + | tig0034928:5874-5893 | Msa1453880:CDS | 55.0% | |
| AGGGCGGAGTCGAGGTTCTT+TGG | - | tig0034928:2193-2212 | Msa1453880:intergenic | 60.0% | |
| ACTCTTGCTCCAGCTGCTGC+AGG | + | tig0034928:3465-3484 | Msa1453880:CDS | 60.0% | |
| TCCAGCTGCTGCAGGAGATC+AGG | + | tig0034928:3473-3492 | Msa1453880:CDS | 60.0% | |
| ACCTGATCTCCTGCAGCAGC+TGG | - | tig0034928:3477-3496 | Msa1453880:intergenic | 60.0% | |
| ACGGCTTTCACCAGCAGCAC+AGG | + | tig0034928:4300-4319 | Msa1453880:CDS | 60.0% | |
| GCTTTCACCAGCAGCACAGG+AGG | + | tig0034928:4303-4322 | Msa1453880:CDS | 60.0% | |
| TGTGCTTGGCGGCATGCAAC+AGG | + | tig0034928:5298-5317 | Msa1453880:CDS | 60.0% | |
| TGGCGATGGGCAGTCCAAGA+AGG | + | tig0034928:5367-5386 | Msa1453880:CDS | 60.0% | |
| GGCGATGGGCAGTCCAAGAA+GGG | + | tig0034928:5368-5387 | Msa1453880:CDS | 60.0% | |
| CAGTCCAAGAAGGGTCGCAG+AGG | + | tig0034928:5377-5396 | Msa1453880:CDS | 60.0% | |
| GATGCAGCAGGGCGGAGTCG+AGG | - | tig0034928:2201-2220 | Msa1453880:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0034928 | gene | 116 | 6341 | 116 | ID=Msa1453880;Name=Msa1453880 |
| tig0034928 | mRNA | 116 | 6341 | 116 | ID=Msa1453880-mRNA-1;Parent=Msa1453880;Name=Msa1453880-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|1|0.9|1|1|1|10|389|400 |
| tig0034928 | exon | 116 | 169 | 116 | ID=Msa1453880-mRNA-1:exon:19357;Parent=Msa1453880-mRNA-1 |
| tig0034928 | exon | 1270 | 1325 | 1270 | ID=Msa1453880-mRNA-1:exon:19358;Parent=Msa1453880-mRNA-1 |
| tig0034928 | exon | 2152 | 2233 | 2152 | ID=Msa1453880-mRNA-1:exon:19359;Parent=Msa1453880-mRNA-1 |
| tig0034928 | exon | 3366 | 3494 | 3366 | ID=Msa1453880-mRNA-1:exon:19360;Parent=Msa1453880-mRNA-1 |
| tig0034928 | exon | 3675 | 3825 | 3675 | ID=Msa1453880-mRNA-1:exon:19361;Parent=Msa1453880-mRNA-1 |
| tig0034928 | exon | 4226 | 4343 | 4226 | ID=Msa1453880-mRNA-1:exon:19362;Parent=Msa1453880-mRNA-1 |
| tig0034928 | exon | 4722 | 4944 | 4722 | ID=Msa1453880-mRNA-1:exon:19363;Parent=Msa1453880-mRNA-1 |
| tig0034928 | exon | 5209 | 5409 | 5209 | ID=Msa1453880-mRNA-1:exon:19364;Parent=Msa1453880-mRNA-1 |
| tig0034928 | exon | 5509 | 5597 | 5509 | ID=Msa1453880-mRNA-1:exon:19365;Parent=Msa1453880-mRNA-1 |
| tig0034928 | exon | 5853 | 6341 | 5853 | ID=Msa1453880-mRNA-1:exon:19366;Parent=Msa1453880-mRNA-1 |
| tig0034928 | CDS | 116 | 169 | 116 | ID=Msa1453880-mRNA-1:cds;Parent=Msa1453880-mRNA-1 |
| tig0034928 | CDS | 1270 | 1325 | 1270 | ID=Msa1453880-mRNA-1:cds;Parent=Msa1453880-mRNA-1 |
| tig0034928 | CDS | 2152 | 2233 | 2152 | ID=Msa1453880-mRNA-1:cds;Parent=Msa1453880-mRNA-1 |
| tig0034928 | CDS | 3366 | 3494 | 3366 | ID=Msa1453880-mRNA-1:cds;Parent=Msa1453880-mRNA-1 |
| tig0034928 | CDS | 3675 | 3825 | 3675 | ID=Msa1453880-mRNA-1:cds;Parent=Msa1453880-mRNA-1 |
| tig0034928 | CDS | 4226 | 4343 | 4226 | ID=Msa1453880-mRNA-1:cds;Parent=Msa1453880-mRNA-1 |
| tig0034928 | CDS | 4722 | 4944 | 4722 | ID=Msa1453880-mRNA-1:cds;Parent=Msa1453880-mRNA-1 |
| tig0034928 | CDS | 5209 | 5409 | 5209 | ID=Msa1453880-mRNA-1:cds;Parent=Msa1453880-mRNA-1 |
| tig0034928 | CDS | 5509 | 5597 | 5509 | ID=Msa1453880-mRNA-1:cds;Parent=Msa1453880-mRNA-1 |
| tig0034928 | CDS | 5853 | 5952 | 5853 | ID=Msa1453880-mRNA-1:cds;Parent=Msa1453880-mRNA-1 |
| tig0034928 | three_prime_UTR | 5953 | 6341 | 5953 | ID=Msa1453880-mRNA-1:three_prime_utr;Parent=Msa1453880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
