Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0467680 | XP_039684891.1 | 86.650 | 412 | 8 | 2 | 1 | 412 | 1 | 365 | 0.0 | 700 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0467680 | sp|Q9FI94|DHYS_ARATH | 75.000 | 404 | 54 | 2 | 8 | 410 | 2 | 359 | 0.0 | 632 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0467680 | A0A1S2YHD3 | 78.313 | 415 | 42 | 2 | 1 | 415 | 1 | 367 | 0.0 | 666 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa0467680 | 0.812066 | 5.110698e-51 | -8.615850e-47 |
| Msa0036140 | Msa0467680 | 0.801428 | 9.047718e-49 | -8.615850e-47 |
| Msa0140780 | Msa0467680 | 0.820464 | 6.765089e-53 | -8.615850e-47 |
| Msa0157290 | Msa0467680 | 0.811103 | 8.274538e-51 | -8.615850e-47 |
| Msa0188830 | Msa0467680 | 0.810903 | 9.146381e-51 | -8.615850e-47 |
| Msa0195000 | Msa0467680 | 0.800532 | 1.378866e-48 | -8.615850e-47 |
| Msa0200260 | Msa0467680 | 0.828052 | 1.113869e-54 | -8.615850e-47 |
| Msa0373160 | Msa0467680 | 0.950127 | 3.126095e-108 | -8.615850e-47 |
| Msa0380740 | Msa0467680 | 0.809218 | 2.109117e-50 | -8.615850e-47 |
| Msa0410650 | Msa0467680 | 0.807935 | 3.963166e-50 | -8.615850e-47 |
| Msa0467680 | Msa0480980 | 0.801988 | 6.944011e-49 | -8.615850e-47 |
| Msa0467680 | Msa0507680 | 0.819779 | 9.707022e-53 | -8.615850e-47 |
| Msa0467680 | Msa0509610 | 0.800065 | 1.716456e-48 | -8.615850e-47 |
| Msa0467680 | Msa0514030 | 0.970026 | 5.381149e-131 | -8.615850e-47 |
| Msa0467680 | Msa0547490 | 0.800181 | 1.625771e-48 | -8.615850e-47 |
| Msa0467680 | Msa0555020 | 0.805726 | 1.161553e-49 | -8.615850e-47 |
| Msa0467680 | Msa0601850 | 0.803555 | 3.296654e-49 | -8.615850e-47 |
| Msa0467680 | Msa0602240 | 0.802620 | 5.145585e-49 | -8.615850e-47 |
| Msa0467680 | Msa0602250 | 0.804722 | 1.884693e-49 | -8.615850e-47 |
| Msa0467680 | Msa0657970 | 0.829208 | 5.852323e-55 | -8.615850e-47 |
| Msa0467680 | Msa0660330 | 0.801420 | 9.080026e-49 | -8.615850e-47 |
| Msa0467680 | Msa0880140 | 0.807009 | 6.230342e-50 | -8.615850e-47 |
| Msa0467680 | Msa0968680 | 0.802489 | 5.475782e-49 | -8.615850e-47 |
| Msa0467680 | Msa0993600 | 0.801780 | 7.661809e-49 | -8.615850e-47 |
| Msa0467680 | Msa1044420 | 0.807670 | 4.513136e-50 | -8.615850e-47 |
| Msa0467680 | Msa1082500 | 0.805683 | 1.185974e-49 | -8.615850e-47 |
| Msa0467680 | Msa1085200 | 0.810986 | 8.775031e-51 | -8.615850e-47 |
| Msa0467680 | Msa1085300 | 0.808385 | 3.178025e-50 | -8.615850e-47 |
| Msa0467680 | Msa1098560 | 0.801570 | 8.459441e-49 | -8.615850e-47 |
| Msa0467680 | Msa1186060 | 0.807263 | 5.505280e-50 | -8.615850e-47 |
| Msa0467680 | Msa1228210 | 0.800645 | 1.307941e-48 | -8.615850e-47 |
| Msa0467680 | Msa1271280 | 0.802442 | 5.599123e-49 | -8.615850e-47 |
| Msa0467680 | Msa1271300 | 0.807735 | 4.371313e-50 | -8.615850e-47 |
| Msa0467680 | Msa1283860 | 0.817931 | 2.552051e-52 | -8.615850e-47 |
| Msa0467680 | Msa1308380 | 0.817478 | 3.230624e-52 | -8.615850e-47 |
| Msa0467680 | Msa1327320 | 0.802073 | 6.670646e-49 | -8.615850e-47 |
| Msa0467680 | Msa1392260 | 0.806036 | 9.996247e-50 | -8.615850e-47 |
| Msa0467680 | Msa1429900 | 0.806652 | 7.413704e-50 | -8.615850e-47 |
| Msa0243100 | Msa0467680 | 0.844528 | 7.149745e-59 | -8.615850e-47 |
| Msa0287650 | Msa0467680 | 0.836723 | 7.915297e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0467680 | MtrunA17_Chr8g0376541 | 86.650 | 412 | 8 | 2 | 1 | 412 | 1 | 365 | 0.0 | 700 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0467680 | AT5G05920.1 | 75.000 | 404 | 54 | 2 | 8 | 410 | 2 | 359 | 0.0 | 632 |
| Msa0467680 | AT5G05920.2 | 76.241 | 282 | 21 | 1 | 129 | 410 | 6 | 241 | 7.51e-158 | 445 |
| Msa0467680 | AT5G05920.3 | 71.889 | 217 | 15 | 1 | 194 | 410 | 1 | 171 | 2.06e-108 | 317 |
Find 128 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATTGAGAGTCATGAATTT+TGG | 0.197013 | 3_3:-69102372 | Msa0467680:three_prime_UTR |
| GAATTTGATGGAAGTGATTC+TGG | 0.236275 | 3_3:-69102904 | Msa0467680:CDS |
| GAATCGAATCGGTAATTTAT+TGG | 0.240496 | 3_3:-69105317 | Msa0467680:CDS |
| CGAAACTTCTTCATTGATAA+AGG | 0.252532 | 3_3:-69102655 | Msa0467680:exon |
| CCACAATCAGACCAGGGTTT+TGG | 0.262442 | 3_3:+69103180 | None:intergenic |
| TTGGCAATACAACAGATATA+AGG | 0.272646 | 3_3:-69103071 | Msa0467680:intron |
| ATGAAAACTCCTACCTTTAC+TGG | 0.273857 | 3_3:-69103516 | Msa0467680:CDS |
| ACTTCTAATCTTATCTCTTC+TGG | 0.277640 | 3_3:-69106297 | Msa0467680:CDS |
| AATTTGCAATAGTTGTCATT+AGG | 0.299937 | 3_3:+69105292 | None:intergenic |
| AAATCTCTCAAACCTTCTTC+TGG | 0.314444 | 3_3:-69106949 | Msa0467680:five_prime_UTR |
| ATGTACAGCTTCACCATTCA+TGG | 0.318700 | 3_3:+69103047 | None:intergenic |
| ATTTGCAATAGTTGTCATTA+GGG | 0.327811 | 3_3:+69105293 | None:intergenic |
| GAGATGACTGTGCAAGGAAT+TGG | 0.329274 | 3_3:+69106989 | None:intergenic |
| CATTTGATTAACGACTTTAA+CGG | 0.349642 | 3_3:+69106519 | None:intergenic |
| GTTAATCCTGGACAATAAAC+TGG | 0.352135 | 3_3:+69103242 | None:intergenic |
| TCATGACTCTCAATTCCTTC+AGG | 0.357834 | 3_3:+69102379 | None:intergenic |
| TGAAATCATAACCCTCGATT+TGG | 0.358260 | 3_3:+69106617 | None:intergenic |
| TGCCTTGCGCCAACATATAA+AGG | 0.358724 | 3_3:-69105382 | Msa0467680:CDS |
| AATACTGCACAAGAATTTGA+TGG | 0.361085 | 3_3:-69102916 | Msa0467680:CDS |
| GGTTTGCTGTCAAAAGTAAA+AGG | 0.384187 | 3_3:-69102634 | Msa0467680:three_prime_UTR |
| ATGCAGTGTGTTTGAGATCT+TGG | 0.389710 | 3_3:-69102498 | Msa0467680:three_prime_UTR |
| TGCACCATTGCGCATCATAT+TGG | 0.397312 | 3_3:+69102957 | None:intergenic |
| ATTAAATGTCAATGGCAAAC+TGG | 0.398783 | 3_3:+69102471 | None:intergenic |
| CCCCATGAAACAGCCTCATC+TGG | 0.399289 | 3_3:+69102874 | None:intergenic |
| AGGATTAACTGATGGCTCAT+TGG | 0.401238 | 3_3:-69103228 | Msa0467680:CDS |
| GTCCAGATGAGGCTGTTTCA+TGG | 0.409575 | 3_3:-69102876 | Msa0467680:CDS |
| CTCAAATCAATGCTCACAAC+TGG | 0.413436 | 3_3:-69106568 | Msa0467680:CDS |
| AAAGGAGATTTCTCTTTGCC+TGG | 0.415853 | 3_3:-69105364 | Msa0467680:CDS |
| TGACAACTATTGCAAATTTG+AGG | 0.416421 | 3_3:-69105287 | Msa0467680:CDS |
| TGGCAATACAACAGATATAA+GGG | 0.421254 | 3_3:-69103070 | Msa0467680:intron |
| AAGTTCCATACCAAAACATT+TGG | 0.422024 | 3_3:+69102571 | None:intergenic |
| TCATCACAATCCTCATCAAT+AGG | 0.426415 | 3_3:+69106378 | None:intergenic |
| GCGTTGCAAATGTGATGTTT+TGG | 0.427804 | 3_3:+69102979 | None:intergenic |
| CTTCTTATTAACAAACGGTC+TGG | 0.432451 | 3_3:-69106896 | Msa0467680:five_prime_UTR |
| GGATTAACTGATGGCTCATT+GGG | 0.432714 | 3_3:-69103227 | Msa0467680:CDS |
| ACAGTGAGTGCCAAATGTTT+TGG | 0.432869 | 3_3:-69102581 | Msa0467680:three_prime_UTR |
| CGTTAAAGTCGTTAATCAAA+TGG | 0.440345 | 3_3:-69106518 | Msa0467680:intron |
| ATAAGAAGGATTTGGTGTAT+AGG | 0.440396 | 3_3:-69106353 | Msa0467680:CDS |
| AATATTCCAGTTTATTGTCC+AGG | 0.444941 | 3_3:-69103248 | Msa0467680:CDS |
| TCCAGATGAGGCTGTTTCAT+GGG | 0.445073 | 3_3:-69102875 | Msa0467680:CDS |
| CATGTAGTTGTTACAACTAC+AGG | 0.448520 | 3_3:-69105430 | Msa0467680:CDS |
| AGGATCTGCTAAAACTGTTA+AGG | 0.452905 | 3_3:-69102842 | Msa0467680:intron |
| ATCCAAGTTAATAGCTCGAT+TGG | 0.455505 | 3_3:-69103554 | Msa0467680:CDS |
| TGATGAAGATAAGAAGGATT+TGG | 0.455823 | 3_3:-69106361 | Msa0467680:CDS |
| GGGTTGCGTTGAAGCTAGAT+TGG | 0.456974 | 3_3:-69106416 | Msa0467680:intron |
| CTACCTTTACTGGGCATACA+AGG | 0.457425 | 3_3:-69103506 | Msa0467680:CDS |
| TCAAAAGTAAAAGGTGTGGC+TGG | 0.460091 | 3_3:-69102625 | Msa0467680:three_prime_UTR |
| TCATTCTTCTTATTAACAAA+CGG | 0.461967 | 3_3:-69106901 | Msa0467680:five_prime_UTR |
| TCAAATGTTGAAGGAGCAAA+AGG | 0.465723 | 3_3:-69105242 | Msa0467680:CDS |
| TGGCGATTTGCTCCAGAAGA+AGG | 0.466905 | 3_3:+69106937 | None:intergenic |
| TTTAACGGCATCACCAAAGT+TGG | 0.472768 | 3_3:+69106534 | None:intergenic |
| TTTGTTAATAAGAAGAATGA+AGG | 0.474332 | 3_3:+69106904 | None:intergenic |
| GGAGCTTATCTTCGCTCAAA+AGG | 0.483770 | 3_3:-69105343 | Msa0467680:CDS |
| TCCCAATCGAGCTATTAACT+TGG | 0.489104 | 3_3:+69103552 | None:intergenic |
| GAGAAATCTCCTTTATATGT+TGG | 0.490219 | 3_3:+69105373 | None:intergenic |
| ACAGTCAAATTAAATGTCAA+TGG | 0.492199 | 3_3:+69102463 | None:intergenic |
| ACTATTGCAAATTTGAGGAC+TGG | 0.495960 | 3_3:-69105282 | Msa0467680:CDS |
| AACGATAGCATTCCCTCTGC+TGG | 0.497507 | 3_3:-69102702 | Msa0467680:CDS |
| GAATCGGTGCAACTTGGATC+CGG | 0.497715 | 3_3:+69106873 | None:intergenic |
| CGGTTCGAATCGGTGCAACT+TGG | 0.499771 | 3_3:+69106867 | None:intergenic |
| GAAACAAAAGCGGTTCAAAC+CGG | 0.504014 | 3_3:+69106828 | None:intergenic |
| ATAATCATGCCTGTCTTGCT+AGG | 0.505038 | 3_3:+69103018 | None:intergenic |
| GGCACAAAAGCGGTTCGAAT+CGG | 0.509287 | 3_3:+69106857 | None:intergenic |
| GTTGAAGGAGCAAAAGGAAG+AGG | 0.511154 | 3_3:-69105236 | Msa0467680:intron |
| ATGAAGAAGTTTCGTTCTTG+AGG | 0.511791 | 3_3:+69102664 | None:intergenic |
| CATGCAAGTCCTAGCAAGAC+AGG | 0.515398 | 3_3:-69103027 | Msa0467680:CDS |
| AGCGGTTCAAACCGGAATGA+TGG | 0.516003 | 3_3:+69106836 | None:intergenic |
| TTATTAACAAACGGTCTGGC+CGG | 0.517890 | 3_3:-69106892 | Msa0467680:five_prime_UTR |
| TCCAAGTTAATAGCTCGATT+GGG | 0.518058 | 3_3:-69103553 | Msa0467680:CDS |
| CCATGTTGCATTCTGTATGC+AGG | 0.521582 | 3_3:+69103368 | None:intergenic |
| CCAAAACCCTGGTCTGATTG+TGG | 0.527845 | 3_3:-69103180 | Msa0467680:CDS |
| TGACTGTCTTGTTATTTGCA+AGG | 0.529767 | 3_3:-69102447 | Msa0467680:three_prime_UTR |
| TCAAAAGGATTGAATCGAAT+CGG | 0.532537 | 3_3:-69105328 | Msa0467680:CDS |
| AATCGAGCTATTAACTTGGA+TGG | 0.538542 | 3_3:+69103556 | None:intergenic |
| GTTAATAAGAAGAATGAAGG+AGG | 0.539699 | 3_3:+69106907 | None:intergenic |
| AATGAGCCATCAGTTAATCC+TGG | 0.542845 | 3_3:+69103230 | None:intergenic |
| AGAATGAAGGAGGTAGTGAA+TGG | 0.544372 | 3_3:+69106917 | None:intergenic |
| TTCCATTCCTTCCAAAACCC+TGG | 0.545098 | 3_3:-69103191 | Msa0467680:CDS |
| CTCCTTTATATGTTGGCGCA+AGG | 0.549124 | 3_3:+69105380 | None:intergenic |
| GGATTGTGATGAAGATAAGA+AGG | 0.551599 | 3_3:-69106367 | Msa0467680:CDS |
| TGTGAAATACAGCAATCAGT+TGG | 0.556444 | 3_3:+69102202 | None:intergenic |
| TATTGTCCAGGATTAACTGA+TGG | 0.556513 | 3_3:-69103236 | Msa0467680:CDS |
| TTGCCTTGTATGCCCAGTAA+AGG | 0.557308 | 3_3:+69103503 | None:intergenic |
| AAAGAATCTGAAAACCTCGC+AGG | 0.559309 | 3_3:-69106649 | Msa0467680:CDS |
| TTTGAGCGAAGATAAGCTCC+AGG | 0.562914 | 3_3:+69105346 | None:intergenic |
| TTGCGTTGAAGCTAGATTGG+AGG | 0.571247 | 3_3:-69106413 | Msa0467680:intron |
| TTCAGATTCTTTGAAGACTG+TGG | 0.575222 | 3_3:+69106660 | None:intergenic |
| CCAGATGAGGCTGTTTCATG+GGG | 0.576966 | 3_3:-69102874 | Msa0467680:CDS |
| ACAGATATAAGGGCCATGAA+TGG | 0.581048 | 3_3:-69103060 | Msa0467680:intron |
| CTTGTATGCCCAGTAAAGGT+AGG | 0.581698 | 3_3:+69103507 | None:intergenic |
| TGAAAACTCCTACCTTTACT+GGG | 0.585821 | 3_3:-69103515 | Msa0467680:CDS |
| TTCTGGAGCTCGTCCAGATG+AGG | 0.586670 | 3_3:-69102887 | Msa0467680:CDS |
| CAGTGTGTTTGAGATCTTGG+TGG | 0.588371 | 3_3:-69102495 | Msa0467680:three_prime_UTR |
| CGAAATTAACAGCATAACGA+TGG | 0.590760 | 3_3:+69103398 | None:intergenic |
| CAAAAGTAAAAGGTGTGGCT+GGG | 0.590827 | 3_3:-69102624 | Msa0467680:three_prime_UTR |
| GTATGACATACAGCCGACCT+TGG | 0.591390 | 3_3:+69102543 | None:intergenic |
| ACTGTGCAAGGAATTGGAGA+AGG | 0.595975 | 3_3:+69106995 | None:intergenic |
| TTACCTTTGTCAGCATCACA+TGG | 0.601287 | 3_3:-69106256 | Msa0467680:intron |
| AATGTTTCAGCAACCAGCAG+AGG | 0.610798 | 3_3:+69102689 | None:intergenic |
| ACTGATTGCTGTATTTCACA+TGG | 0.611719 | 3_3:-69102199 | Msa0467680:three_prime_UTR |
| GGTATGGAACTTAAAGACCA+AGG | 0.619116 | 3_3:-69102560 | Msa0467680:three_prime_UTR |
| TGGCACTCACTGTGGAGCTG+CGG | 0.620478 | 3_3:+69102591 | None:intergenic |
| AGGAAAGTGTCTCCAAATCG+AGG | 0.620843 | 3_3:-69106629 | Msa0467680:CDS |
| GGTTGATGAACCTATTGATG+AGG | 0.625189 | 3_3:-69106388 | Msa0467680:CDS |
| TGGAACTTAAAGACCAAGGT+CGG | 0.627119 | 3_3:-69102556 | Msa0467680:three_prime_UTR |
| ACTATGTCCACAATCAGACC+AGG | 0.627546 | 3_3:+69103173 | None:intergenic |
| ATGTTTCAGCAACCAGCAGA+GGG | 0.629527 | 3_3:+69102690 | None:intergenic |
| CTGTGCAAGGAATTGGAGAA+GGG | 0.629661 | 3_3:+69106996 | None:intergenic |
| GTTGAAGCTAGATTGGAGGT+TGG | 0.633831 | 3_3:-69106409 | Msa0467680:intron |
| GGAAAGTGTCTCCAAATCGA+GGG | 0.640745 | 3_3:-69106628 | Msa0467680:CDS |
| CTGATTGCTGTATTTCACAT+GGG | 0.642069 | 3_3:-69102198 | Msa0467680:three_prime_UTR |
| AAAACATTTGGCACTCACTG+TGG | 0.643884 | 3_3:+69102583 | None:intergenic |
| GAGGGTTATGATTTCAACCG+TGG | 0.648518 | 3_3:-69106610 | Msa0467680:CDS |
| AACGCCAATATGATGCGCAA+TGG | 0.648917 | 3_3:-69102961 | Msa0467680:CDS |
| CCTGCATACAGAATGCAACA+TGG | 0.652599 | 3_3:-69103368 | Msa0467680:intron |
| CCGGAATGATGGCACAAAAG+CGG | 0.655753 | 3_3:+69106847 | None:intergenic |
| GCTGTTGATAATCGACGCCA+CGG | 0.656868 | 3_3:+69106593 | None:intergenic |
| TCCACGGGTTGAAACAAAAG+CGG | 0.661658 | 3_3:+69106818 | None:intergenic |
| TTTGGAGACACTTTCCTGCG+AGG | 0.661904 | 3_3:+69106635 | None:intergenic |
| CTGATTGTGGACATAGTGCA+AGG | 0.662154 | 3_3:-69103167 | Msa0467680:intron |
| TCACCATGTGATGCTGACAA+AGG | 0.672957 | 3_3:+69106253 | None:intergenic |
| GAAGACTGTGGAGTGAACTG+AGG | 0.694757 | 3_3:+69106672 | None:intergenic |
| CAAAACTAAGAGAAACCACA+CGG | 0.700672 | 3_3:+69102313 | None:intergenic |
| GTAGTTGTTACAACTACAGG+TGG | 0.721014 | 3_3:-69105427 | Msa0467680:CDS |
| GCTGTCAAAAGTAAAAGGTG+TGG | 0.727672 | 3_3:-69102629 | Msa0467680:three_prime_UTR |
| CTATGTCCACAATCAGACCA+GGG | 0.729813 | 3_3:+69103174 | None:intergenic |
| GCGCAATGGTGCAGACTATG+CGG | 0.731569 | 3_3:-69102947 | Msa0467680:CDS |
| CAGATGAGGCTGTTTCATGG+GGG | 0.740121 | 3_3:-69102873 | Msa0467680:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATTAATTTTTGTAATGA+AGG | + | chr3_3:69104033-69104052 | None:intergenic | 10.0% |
| !! | ATTTATATAAACAACTAAAT+CGG | + | chr3_3:69104614-69104633 | None:intergenic | 10.0% |
| !! | TTAGTTGTTTATATAAATAT+TGG | - | chr3_3:69104616-69104635 | Msa0467680:intron | 10.0% |
| !! | TCTAATTCTAATTAAAAAAA+AGG | + | chr3_3:69105266-69105285 | None:intergenic | 10.0% |
| !! | AATCATATAACTAAAATAAT+TGG | - | chr3_3:69106134-69106153 | Msa0467680:intron | 10.0% |
| !! | ATATATAAAAACAAAGAGAT+GGG | + | chr3_3:69102738-69102757 | None:intergenic | 15.0% |
| !! | AATATATAAAAACAAAGAGA+TGG | + | chr3_3:69102739-69102758 | None:intergenic | 15.0% |
| !! | TTCAACATTTGATTAAAAAT+AGG | + | chr3_3:69103974-69103993 | None:intergenic | 15.0% |
| !!! | TATTTTTAATCAAATGTTGA+AGG | - | chr3_3:69103973-69103992 | Msa0467680:intron | 15.0% |
| !!! | ACAATAAATCAAAACTTTTA+TGG | + | chr3_3:69104318-69104337 | None:intergenic | 15.0% |
| !! | TGTTTATATAAATATTGGTA+TGG | - | chr3_3:69104621-69104640 | Msa0467680:intron | 15.0% |
| !!! | TTCTTCATTTCTTTTTTAAA+AGG | + | chr3_3:69105207-69105226 | None:intergenic | 15.0% |
| !! | ATATATTGTTTAATTACTAC+CGG | - | chr3_3:69105395-69105414 | Msa0467680:CDS | 15.0% |
| !! | AAAAAAAAAAACTTCATATG+AGG | + | chr3_3:69105578-69105597 | None:intergenic | 15.0% |
| !!! | TAAAAAAGACATAGTTTTAA+GGG | + | chr3_3:69106474-69106493 | None:intergenic | 15.0% |
| !!! | ATAAAAAAGACATAGTTTTA+AGG | + | chr3_3:69106475-69106494 | None:intergenic | 15.0% |
| !! | ACTAAAAAATTACTTCTAAA+TGG | + | chr3_3:69106825-69106844 | None:intergenic | 15.0% |
| !! | TTTGTTAATAAGAAGAATGA+AGG | + | chr3_3:69102323-69102342 | None:intergenic | 20.0% |
| !! | TCATTCTTCTTATTAACAAA+CGG | - | chr3_3:69102323-69102342 | Msa0467680:three_prime_UTR | 20.0% |
| !!! | TTTTTTTCTTTGTGTCTTTT+TGG | - | chr3_3:69102780-69102799 | Msa0467680:intron | 20.0% |
| !! | TATTAGAAGATAATCTCAAA+TGG | - | chr3_3:69103072-69103091 | Msa0467680:intron | 20.0% |
| !! | ATTAGAAGATAATCTCAAAT+GGG | - | chr3_3:69103073-69103092 | Msa0467680:intron | 20.0% |
| !!! | TATACATGTATAAAGGTATA+TGG | - | chr3_3:69103518-69103537 | Msa0467680:CDS | 20.0% |
| !!! | ATACATGTATAAAGGTATAT+GGG | - | chr3_3:69103519-69103538 | Msa0467680:CDS | 20.0% |
| !! | TAGTAAAAGGAAATTGTAAT+AGG | + | chr3_3:69103625-69103644 | None:intergenic | 20.0% |
| !! | CTTCAAATATATCTAGTAAA+AGG | + | chr3_3:69103638-69103657 | None:intergenic | 20.0% |
| !!! | ATATGATTAAGTTTTTGTGA+AGG | - | chr3_3:69104050-69104069 | Msa0467680:intron | 20.0% |
| !! | ACCTTGAAAATCTTAATTTA+TGG | - | chr3_3:69104229-69104248 | Msa0467680:intron | 20.0% |
| !!! | ACCATAAATTAAGATTTTCA+AGG | + | chr3_3:69104233-69104252 | None:intergenic | 20.0% |
| !! | AATTATGAACAAATGACTTA+TGG | - | chr3_3:69104440-69104459 | Msa0467680:intron | 20.0% |
| !! | GCAAAATTATTATTGAAATC+TGG | + | chr3_3:69105180-69105199 | None:intergenic | 20.0% |
| !!! | TGTAACATTTGTATTTTGTT+TGG | - | chr3_3:69105345-69105364 | Msa0467680:CDS | 20.0% |
| !! | AAACCAAGGTTAATTAAAAT+TGG | + | chr3_3:69105481-69105500 | None:intergenic | 20.0% |
| !!! | TAATACCATTGATGTTTTTT+TGG | - | chr3_3:69105940-69105959 | Msa0467680:intron | 20.0% |
| ! | CATTTGATTAACGACTTTAA+CGG | + | chr3_3:69102708-69102727 | None:intergenic | 25.0% |
| !!! | TGTTACATGTAAAGTGTTTT+TGG | - | chr3_3:69102899-69102918 | Msa0467680:CDS | 25.0% |
| !!! | GTTACATGTAAAGTGTTTTT+GGG | - | chr3_3:69102900-69102919 | Msa0467680:CDS | 25.0% |
| ! | TTAGAAGATAATCTCAAATG+GGG | - | chr3_3:69103074-69103093 | Msa0467680:intron | 25.0% |
| ! | AATTTATGCAATATCAAGTC+AGG | - | chr3_3:69103129-69103148 | Msa0467680:intron | 25.0% |
| ! | ATTTATGCAATATCAAGTCA+GGG | - | chr3_3:69103130-69103149 | Msa0467680:intron | 25.0% |
| !! | TTTCAACTTTTTGCACATTA+AGG | + | chr3_3:69103182-69103201 | None:intergenic | 25.0% |
| ! | AGCAACATATAAGAAATTCA+AGG | + | chr3_3:69103339-69103358 | None:intergenic | 25.0% |
| ! | GGTAGTATATACATGTATAA+AGG | - | chr3_3:69103511-69103530 | Msa0467680:CDS | 25.0% |
| ! | TTGACCTAATATACTATACT+TGG | + | chr3_3:69103575-69103594 | None:intergenic | 25.0% |
| ! | ATTTGCAATAGTTGTCATTA+GGG | + | chr3_3:69103934-69103953 | None:intergenic | 25.0% |
| ! | AATTTGCAATAGTTGTCATT+AGG | + | chr3_3:69103935-69103954 | None:intergenic | 25.0% |
| !!! | ATTTTCAAGGTGATGATAAA+AGG | + | chr3_3:69104220-69104239 | None:intergenic | 25.0% |
| !! | TTCTCTCTTTTAAACAATGT+TGG | - | chr3_3:69104355-69104374 | Msa0467680:intron | 25.0% |
| ! | AGTATCCACATAATAATAGT+TGG | - | chr3_3:69104494-69104513 | Msa0467680:intron | 25.0% |
| ! | GTATCCACATAATAATAGTT+GGG | - | chr3_3:69104495-69104514 | Msa0467680:intron | 25.0% |
| !! | ATGTTTTGTGTGTTAATAGT+AGG | - | chr3_3:69104773-69104792 | Msa0467680:intron | 25.0% |
| ! | TATACATTATGTTCTTGTTG+AGG | - | chr3_3:69105012-69105031 | Msa0467680:intron | 25.0% |
| ! | AAGGTTAATTAAAATTGGAC+TGG | + | chr3_3:69105476-69105495 | None:intergenic | 25.0% |
| !!! | AGTCCAATTTTAATTAACCT+TGG | - | chr3_3:69105475-69105494 | Msa0467680:intron | 25.0% |
| ! | AAACACCAAAAAAACATCAA+TGG | + | chr3_3:69105948-69105967 | None:intergenic | 25.0% |
| !! | ATGGATGATTTTGAATCAAT+TGG | - | chr3_3:69106111-69106130 | Msa0467680:intron | 25.0% |
| ! | TTCTGTAAAGAAAACAAGTA+GGG | + | chr3_3:69106425-69106444 | None:intergenic | 25.0% |
| ! | ATTCTGTAAAGAAAACAAGT+AGG | + | chr3_3:69106426-69106445 | None:intergenic | 25.0% |
| !!! | CTTTTTTATTTCACTAAACC+AGG | - | chr3_3:69106486-69106505 | Msa0467680:intron | 25.0% |
| ! | ACAGTCAAATTAAATGTCAA+TGG | + | chr3_3:69106764-69106783 | None:intergenic | 25.0% |
| !!! | AAGTAATTTTTTAGTCCTGA+AGG | - | chr3_3:69106830-69106849 | Msa0467680:five_prime_UTR | 25.0% |
| GTTAATAAGAAGAATGAAGG+AGG | + | chr3_3:69102320-69102339 | None:intergenic | 30.0% | |
| !!! | GTTTTTGTTTTGAGTCATTG+AGG | - | chr3_3:69102429-69102448 | Msa0467680:three_prime_UTR | 30.0% |
| CGTTAAAGTCGTTAATCAAA+TGG | - | chr3_3:69102706-69102725 | Msa0467680:CDS | 30.0% | |
| !!! | TTTGTGTCTTTTTGGAACAT+GGG | - | chr3_3:69102788-69102807 | Msa0467680:intron | 30.0% |
| TGATGAAGATAAGAAGGATT+TGG | - | chr3_3:69102863-69102882 | Msa0467680:CDS | 30.0% | |
| !! | ATAAGAAGGATTTGGTGTAT+AGG | - | chr3_3:69102871-69102890 | Msa0467680:CDS | 30.0% |
| ACTTCTAATCTTATCTCTTC+TGG | - | chr3_3:69102927-69102946 | Msa0467680:CDS | 30.0% | |
| ! | TTGTTTGAATCAGATTTTCC+TGG | - | chr3_3:69103019-69103038 | Msa0467680:CDS | 30.0% |
| ! | TTCCTGGTTCTTATTGAATA+TGG | - | chr3_3:69103035-69103054 | Msa0467680:CDS | 30.0% |
| TTCCATATTCAATAAGAACC+AGG | + | chr3_3:69103040-69103059 | None:intergenic | 30.0% | |
| TTTATGCAATATCAAGTCAG+GGG | - | chr3_3:69103131-69103150 | Msa0467680:intron | 30.0% | |
| ! | GGTTAGTTATGTAGTGAAAA+TGG | - | chr3_3:69103153-69103172 | Msa0467680:intron | 30.0% |
| ! | TTATATGTTGCTTGTCACTT+AGG | - | chr3_3:69103347-69103366 | Msa0467680:intron | 30.0% |
| ! | TATATGTTGCTTGTCACTTA+GGG | - | chr3_3:69103348-69103367 | Msa0467680:intron | 30.0% |
| TCATCACTACAAAAATCAGT+GGG | + | chr3_3:69103412-69103431 | None:intergenic | 30.0% | |
| TTCATCACTACAAAAATCAG+TGG | + | chr3_3:69103413-69103432 | None:intergenic | 30.0% | |
| TACGCCAAGTATAGTATATT+AGG | - | chr3_3:69103568-69103587 | Msa0467680:CDS | 30.0% | |
| CTAGATATATTTGAAGATCC+TGG | - | chr3_3:69103642-69103661 | Msa0467680:intron | 30.0% | |
| ATATATTTGAAGATCCTGGT+GGG | - | chr3_3:69103646-69103665 | Msa0467680:intron | 30.0% | |
| CACAACATTACAAAAACACT+TGG | + | chr3_3:69103724-69103743 | None:intergenic | 30.0% | |
| TTGTAATGTTGTGAATGACA+TGG | - | chr3_3:69103731-69103750 | Msa0467680:intron | 30.0% | |
| GAGAAATCTCCTTTATATGT+TGG | + | chr3_3:69103854-69103873 | None:intergenic | 30.0% | |
| TCAAAAGGATTGAATCGAAT+CGG | - | chr3_3:69103896-69103915 | Msa0467680:intron | 30.0% | |
| GAATCGAATCGGTAATTTAT+TGG | - | chr3_3:69103907-69103926 | Msa0467680:intron | 30.0% | |
| TGACAACTATTGCAAATTTG+AGG | - | chr3_3:69103937-69103956 | Msa0467680:intron | 30.0% | |
| TTTGTGAAGGTAATCAAAAC+CGG | - | chr3_3:69104063-69104082 | Msa0467680:intron | 30.0% | |
| TATTGCTTAAAGGAGATAAC+TGG | + | chr3_3:69104269-69104288 | None:intergenic | 30.0% | |
| GTTATCTCCTTTAAGCAATA+TGG | - | chr3_3:69104269-69104288 | Msa0467680:intron | 30.0% | |
| TGAAGTTCCATATTGCTTAA+AGG | + | chr3_3:69104279-69104298 | None:intergenic | 30.0% | |
| GTTTAAAAGAGAGAACTAGT+AGG | + | chr3_3:69104350-69104369 | None:intergenic | 30.0% | |
| AAAGTAAATAGTACATCTGC+AGG | - | chr3_3:69104385-69104404 | Msa0467680:intron | 30.0% | |
| ! | GTATATAAGGTTTTCGTTGT+GGG | - | chr3_3:69104660-69104679 | Msa0467680:intron | 30.0% |
| ! | TATATAAGGTTTTCGTTGTG+GGG | - | chr3_3:69104661-69104680 | Msa0467680:intron | 30.0% |
| AGAGATCATACTATGTTGTA+TGG | - | chr3_3:69104837-69104856 | Msa0467680:intron | 30.0% | |
| ! | TATCTGAAAAATGATGATGC+AGG | - | chr3_3:69104880-69104899 | Msa0467680:intron | 30.0% |
| ! | TAAGTAGTGCATGTTTGTTA+AGG | - | chr3_3:69104944-69104963 | Msa0467680:intron | 30.0% |
| !!! | AGTGTTCACTTGCTATATTT+TGG | - | chr3_3:69104970-69104989 | Msa0467680:intron | 30.0% |
| !!! | TTCACTTGCTATATTTTGGT+AGG | - | chr3_3:69104974-69104993 | Msa0467680:intron | 30.0% |
| !!! | TCACTTGCTATATTTTGGTA+GGG | - | chr3_3:69104975-69104994 | Msa0467680:intron | 30.0% |
| CTCAAGGCAATATAATAACA+TGG | + | chr3_3:69105107-69105126 | None:intergenic | 30.0% | |
| ! | TATTGCCTTGAGATATTTTG+TGG | - | chr3_3:69105115-69105134 | Msa0467680:intron | 30.0% |
| CAAATCCACAAAATATCTCA+AGG | + | chr3_3:69105123-69105142 | None:intergenic | 30.0% | |
| ! | GATATTTTGTGGATTTGTGA+TGG | - | chr3_3:69105126-69105145 | Msa0467680:intron | 30.0% |
| !!! | ACTTCATCATCTTCCTTTTT+TGG | - | chr3_3:69105627-69105646 | Msa0467680:intron | 30.0% |
| AATATTCCAGTTTATTGTCC+AGG | - | chr3_3:69105976-69105995 | Msa0467680:intron | 30.0% | |
| ! | TCATTTTACTCTTTACTGCA+TGG | - | chr3_3:69106092-69106111 | Msa0467680:intron | 30.0% |
| TTGGCAATACAACAGATATA+AGG | - | chr3_3:69106153-69106172 | Msa0467680:intron | 30.0% | |
| TGGCAATACAACAGATATAA+GGG | - | chr3_3:69106154-69106173 | Msa0467680:intron | 30.0% | |
| ! | AAGACAGGCATGATTATTTT+AGG | - | chr3_3:69106212-69106231 | Msa0467680:intron | 30.0% |
| AATACTGCACAAGAATTTGA+TGG | - | chr3_3:69106308-69106327 | Msa0467680:CDS | 30.0% | |
| ! | AACAAGTAGGGAAAGTATAT+AGG | + | chr3_3:69106413-69106432 | None:intergenic | 30.0% |
| GATATAGTACAGCAAAAGTT+TGG | + | chr3_3:69106452-69106471 | None:intergenic | 30.0% | |
| CGAAACTTCTTCATTGATAA+AGG | - | chr3_3:69106569-69106588 | Msa0467680:CDS | 30.0% | |
| AAGTTCCATACCAAAACATT+TGG | + | chr3_3:69106656-69106675 | None:intergenic | 30.0% | |
| ATTAAATGTCAATGGCAAAC+TGG | + | chr3_3:69106756-69106775 | None:intergenic | 30.0% | |
| !! | GGTAAAAAATGCTTGTTATG+TGG | + | chr3_3:69106804-69106823 | None:intergenic | 30.0% |
| ! | GAATTGAGAGTCATGAATTT+TGG | - | chr3_3:69106852-69106871 | Msa0467680:five_prime_UTR | 30.0% |
| !!! | CTATATTTTTTGAAACCGTG+TGG | - | chr3_3:69106896-69106915 | Msa0467680:five_prime_UTR | 30.0% |
| !! | TTTTTAGAGATGACTGTGCA+AGG | + | chr3_3:69102244-69102263 | None:intergenic | 35.0% |
| AAATCTCTCAAACCTTCTTC+TGG | - | chr3_3:69102275-69102294 | Msa0467680:three_prime_UTR | 35.0% | |
| CTTCTTATTAACAAACGGTC+TGG | - | chr3_3:69102328-69102347 | Msa0467680:three_prime_UTR | 35.0% | |
| ACTCAAAACAAAAACTCCAC+GGG | + | chr3_3:69102424-69102443 | None:intergenic | 35.0% | |
| GACTCAAAACAAAAACTCCA+CGG | + | chr3_3:69102425-69102444 | None:intergenic | 35.0% | |
| ! | TTCAGATTCTTTGAAGACTG+TGG | + | chr3_3:69102567-69102586 | None:intergenic | 35.0% |
| TGAAATCATAACCCTCGATT+TGG | + | chr3_3:69102610-69102629 | None:intergenic | 35.0% | |
| !!! | CTTTGTGTCTTTTTGGAACA+TGG | - | chr3_3:69102787-69102806 | Msa0467680:intron | 35.0% |
| TCATCACAATCCTCATCAAT+AGG | + | chr3_3:69102849-69102868 | None:intergenic | 35.0% | |
| GGATTGTGATGAAGATAAGA+AGG | - | chr3_3:69102857-69102876 | Msa0467680:CDS | 35.0% | |
| TTATGCAATATCAAGTCAGG+GGG | - | chr3_3:69103132-69103151 | Msa0467680:intron | 35.0% | |
| TGCAAATCATTGAGCAAACA+CGG | + | chr3_3:69103243-69103262 | None:intergenic | 35.0% | |
| ! | TGTTTGCTCAATGATTTGCA+TGG | - | chr3_3:69103243-69103262 | Msa0467680:CDS | 35.0% |
| CAAGAATATGCATGACTATG+AGG | - | chr3_3:69103490-69103509 | Msa0467680:CDS | 35.0% | |
| ! | GTATAAAGGTATATGGGTGA+TGG | - | chr3_3:69103525-69103544 | Msa0467680:CDS | 35.0% |
| CATGAAAAGCTTGTAATGTG+AGG | - | chr3_3:69103596-69103615 | Msa0467680:intron | 35.0% | |
| GATATATTTGAAGATCCTGG+TGG | - | chr3_3:69103645-69103664 | Msa0467680:intron | 35.0% | |
| ! | TTTTCTTGCATCTGTTCTAC+AGG | - | chr3_3:69103769-69103788 | Msa0467680:intron | 35.0% |
| CATGTAGTTGTTACAACTAC+AGG | - | chr3_3:69103794-69103813 | Msa0467680:intron | 35.0% | |
| ACTATTGCAAATTTGAGGAC+TGG | - | chr3_3:69103942-69103961 | Msa0467680:intron | 35.0% | |
| TCAAATGTTGAAGGAGCAAA+AGG | - | chr3_3:69103982-69104001 | Msa0467680:intron | 35.0% | |
| AAATAGTACATCTGCAGGAA+AGG | - | chr3_3:69104390-69104409 | Msa0467680:intron | 35.0% | |
| GGTGATACATTTAGACACTA+AGG | - | chr3_3:69104520-69104539 | Msa0467680:intron | 35.0% | |
| TACATTTAGACACTAAGGTG+TGG | - | chr3_3:69104525-69104544 | Msa0467680:intron | 35.0% | |
| GTTGGAAGTGAAGAGATATA+CGG | - | chr3_3:69104547-69104566 | Msa0467680:intron | 35.0% | |
| TATTGGTATGGAAACAATGC+TGG | - | chr3_3:69104633-69104652 | Msa0467680:intron | 35.0% | |
| ! | GGTATATAAGGTTTTCGTTG+TGG | - | chr3_3:69104659-69104678 | Msa0467680:intron | 35.0% |
| ! | AATTGATTCCAATGACACCA+TGG | - | chr3_3:69104806-69104825 | Msa0467680:intron | 35.0% |
| CGGTATTTGTATAGTGTGAT+TGG | - | chr3_3:69104907-69104926 | Msa0467680:intron | 35.0% | |
| ATTATGTTCTTGTTGAGGTG+TGG | - | chr3_3:69105017-69105036 | Msa0467680:intron | 35.0% | |
| ACAACACATTCTGCCAAAAA+AGG | + | chr3_3:69105643-69105662 | None:intergenic | 35.0% | |
| !!! | TTTTTTGGCAGAATGTGTTG+TGG | - | chr3_3:69105642-69105661 | Msa0467680:intron | 35.0% |
| ! | AATCGAGCTATTAACTTGGA+TGG | + | chr3_3:69105671-69105690 | None:intergenic | 35.0% |
| ATCCAAGTTAATAGCTCGAT+TGG | - | chr3_3:69105670-69105689 | Msa0467680:intron | 35.0% | |
| TCCAAGTTAATAGCTCGATT+GGG | - | chr3_3:69105671-69105690 | Msa0467680:intron | 35.0% | |
| ATGAAAACTCCTACCTTTAC+TGG | - | chr3_3:69105708-69105727 | Msa0467680:intron | 35.0% | |
| TGAAAACTCCTACCTTTACT+GGG | - | chr3_3:69105709-69105728 | Msa0467680:intron | 35.0% | |
| CGAAATTAACAGCATAACGA+TGG | + | chr3_3:69105829-69105848 | None:intergenic | 35.0% | |
| GTTAATCCTGGACAATAAAC+TGG | + | chr3_3:69105985-69106004 | None:intergenic | 35.0% | |
| TATTGTCCAGGATTAACTGA+TGG | - | chr3_3:69105988-69106007 | Msa0467680:intron | 35.0% | |
| !!! | ACAGGCATGATTATTTTAGG+AGG | - | chr3_3:69106215-69106234 | Msa0467680:intron | 35.0% |
| !! | TGCAAATGTGATGTTTTGGA+AGG | + | chr3_3:69106244-69106263 | None:intergenic | 35.0% |
| GAATTTGATGGAAGTGATTC+TGG | - | chr3_3:69106320-69106339 | Msa0467680:CDS | 35.0% | |
| AGGATCTGCTAAAACTGTTA+AGG | - | chr3_3:69106382-69106401 | Msa0467680:CDS | 35.0% | |
| ATGAAGAAGTTTCGTTCTTG+AGG | + | chr3_3:69106563-69106582 | None:intergenic | 35.0% | |
| !! | GGTTTGCTGTCAAAAGTAAA+AGG | - | chr3_3:69106590-69106609 | Msa0467680:CDS | 35.0% |
| !! | TGACTGTCTTGTTATTTGCA+AGG | - | chr3_3:69106777-69106796 | Msa0467680:five_prime_UTR | 35.0% |
| CAAAACTAAGAGAAACCACA+CGG | + | chr3_3:69106914-69106933 | None:intergenic | 35.0% | |
| !!! | TGTGGTTTCTCTTAGTTTTG+AGG | - | chr3_3:69106914-69106933 | Msa0467680:five_prime_UTR | 35.0% |
| TGTGAAATACAGCAATCAGT+TGG | + | chr3_3:69107025-69107044 | None:intergenic | 35.0% | |
| ACTGATTGCTGTATTTCACA+TGG | - | chr3_3:69107025-69107044 | Msa0467680:five_prime_UTR | 35.0% | |
| CTGATTGCTGTATTTCACAT+GGG | - | chr3_3:69107026-69107045 | Msa0467680:five_prime_UTR | 35.0% | |
| AGAATGAAGGAGGTAGTGAA+TGG | + | chr3_3:69102310-69102329 | None:intergenic | 40.0% | |
| TTATTAACAAACGGTCTGGC+CGG | - | chr3_3:69102332-69102351 | Msa0467680:three_prime_UTR | 40.0% | |
| GAAACAAAAGCGGTTCAAAC+CGG | + | chr3_3:69102399-69102418 | None:intergenic | 40.0% | |
| AAAGAATCTGAAAACCTCGC+AGG | - | chr3_3:69102575-69102594 | Msa0467680:three_prime_UTR | 40.0% | |
| CTCAAATCAATGCTCACAAC+TGG | - | chr3_3:69102656-69102675 | Msa0467680:exon | 40.0% | |
| !! | GGTTTTCAAGCTTCCAACTT+TGG | - | chr3_3:69102677-69102696 | Msa0467680:CDS | 40.0% |
| TTTAACGGCATCACCAAAGT+TGG | + | chr3_3:69102693-69102712 | None:intergenic | 40.0% | |
| !! | GGTTGATGAACCTATTGATG+AGG | - | chr3_3:69102836-69102855 | Msa0467680:intron | 40.0% |
| TTACCTTTGTCAGCATCACA+TGG | - | chr3_3:69102968-69102987 | Msa0467680:CDS | 40.0% | |
| ! | TGATGGTTCCTTGTTAGCTT+TGG | - | chr3_3:69103542-69103561 | Msa0467680:CDS | 40.0% |
| GCGTAATACCAAAGCTAACA+AGG | + | chr3_3:69103553-69103572 | None:intergenic | 40.0% | |
| GTAGTTGTTACAACTACAGG+TGG | - | chr3_3:69103797-69103816 | Msa0467680:intron | 40.0% | |
| AAAGGAGATTTCTCTTTGCC+TGG | - | chr3_3:69103860-69103879 | Msa0467680:intron | 40.0% | |
| TGAAGGTAATCAAAACCGGA+TGG | - | chr3_3:69104067-69104086 | Msa0467680:intron | 40.0% | |
| ATCTGCAGGAAAGGAATTAC+CGG | - | chr3_3:69104399-69104418 | Msa0467680:intron | 40.0% | |
| AATGACTTATGGTTGCTACC+TGG | - | chr3_3:69104451-69104470 | Msa0467680:intron | 40.0% | |
| CCAGCCCAACTATTATTATG+TGG | + | chr3_3:69104502-69104521 | None:intergenic | 40.0% | |
| CCACATAATAATAGTTGGGC+TGG | - | chr3_3:69104499-69104518 | Msa0467680:intron | 40.0% | |
| TTTAGACACTAAGGTGTGGT+TGG | - | chr3_3:69104529-69104548 | Msa0467680:intron | 40.0% | |
| TGAAGAGATATACGGCTATC+TGG | - | chr3_3:69104555-69104574 | Msa0467680:intron | 40.0% | |
| AGGAAATAGCTTCTACAGGT+TGG | - | chr3_3:69104579-69104598 | Msa0467680:intron | 40.0% | |
| !! | AATAGCTTCTACAGGTTGGT+CGG | - | chr3_3:69104583-69104602 | Msa0467680:intron | 40.0% |
| ! | CAATGCTGGAGAGGTATATA+AGG | - | chr3_3:69104647-69104666 | Msa0467680:intron | 40.0% |
| TGTTGTATGGTGTTTAGCAG+TGG | - | chr3_3:69104850-69104869 | Msa0467680:intron | 40.0% | |
| GTTGTATGGTGTTTAGCAGT+GGG | - | chr3_3:69104851-69104870 | Msa0467680:intron | 40.0% | |
| TTGTATGGTGTTTAGCAGTG+GGG | - | chr3_3:69104852-69104871 | Msa0467680:intron | 40.0% | |
| ! | AAAATGATGATGCAGGCTAG+CGG | - | chr3_3:69104887-69104906 | Msa0467680:intron | 40.0% |
| GAGGTGTGGTTTCTAATAAC+TGG | - | chr3_3:69105031-69105050 | Msa0467680:intron | 40.0% | |
| ! | GATTTTACTCCTGACAGTTC+TGG | - | chr3_3:69105058-69105077 | Msa0467680:intron | 40.0% |
| ATAACATGGTTCAGTTGAGC+CGG | + | chr3_3:69105093-69105112 | None:intergenic | 40.0% | |
| AAGGAAGATGATGAAGTGAC+AGG | + | chr3_3:69105624-69105643 | None:intergenic | 40.0% | |
| TCCCAATCGAGCTATTAACT+TGG | + | chr3_3:69105675-69105694 | None:intergenic | 40.0% | |
| AATGAGCCATCAGTTAATCC+TGG | + | chr3_3:69105997-69106016 | None:intergenic | 40.0% | |
| AGGATTAACTGATGGCTCAT+TGG | - | chr3_3:69105996-69106015 | Msa0467680:intron | 40.0% | |
| GGATTAACTGATGGCTCATT+GGG | - | chr3_3:69105997-69106016 | Msa0467680:intron | 40.0% | |
| ACAGATATAAGGGCCATGAA+TGG | - | chr3_3:69106164-69106183 | Msa0467680:intron | 40.0% | |
| ATGTACAGCTTCACCATTCA+TGG | + | chr3_3:69106180-69106199 | None:intergenic | 40.0% | |
| ATAATCATGCCTGTCTTGCT+AGG | + | chr3_3:69106209-69106228 | None:intergenic | 40.0% | |
| !!! | GGCATGATTATTTTAGGAGG+CGG | - | chr3_3:69106218-69106237 | Msa0467680:intron | 40.0% |
| ! | GCGTTGCAAATGTGATGTTT+TGG | + | chr3_3:69106248-69106267 | None:intergenic | 40.0% |
| GCTGTCAAAAGTAAAAGGTG+TGG | - | chr3_3:69106595-69106614 | Msa0467680:CDS | 40.0% | |
| ! | TCAAAAGTAAAAGGTGTGGC+TGG | - | chr3_3:69106599-69106618 | Msa0467680:CDS | 40.0% |
| ! | CAAAAGTAAAAGGTGTGGCT+GGG | - | chr3_3:69106600-69106619 | Msa0467680:CDS | 40.0% |
| AAAACATTTGGCACTCACTG+TGG | + | chr3_3:69106644-69106663 | None:intergenic | 40.0% | |
| ! | ACAGTGAGTGCCAAATGTTT+TGG | - | chr3_3:69106643-69106662 | Msa0467680:CDS | 40.0% |
| !!! | GAGTGCCAAATGTTTTGGTA+TGG | - | chr3_3:69106648-69106667 | Msa0467680:CDS | 40.0% |
| GGTATGGAACTTAAAGACCA+AGG | - | chr3_3:69106664-69106683 | Msa0467680:CDS | 40.0% | |
| TGGAACTTAAAGACCAAGGT+CGG | - | chr3_3:69106668-69106687 | Msa0467680:CDS | 40.0% | |
| ! | ATGCAGTGTGTTTGAGATCT+TGG | - | chr3_3:69106726-69106745 | Msa0467680:exon | 40.0% |
| TCATGACTCTCAATTCCTTC+AGG | + | chr3_3:69106848-69106867 | None:intergenic | 40.0% | |
| CTGTGCAAGGAATTGGAGAA+GGG | + | chr3_3:69102231-69102250 | None:intergenic | 45.0% | |
| ACTGTGCAAGGAATTGGAGA+AGG | + | chr3_3:69102232-69102251 | None:intergenic | 45.0% | |
| GAGATGACTGTGCAAGGAAT+TGG | + | chr3_3:69102238-69102257 | None:intergenic | 45.0% | |
| ! | TCCACGGGTTGAAACAAAAG+CGG | + | chr3_3:69102409-69102428 | None:intergenic | 45.0% |
| !! | AGGAAAGTGTCTCCAAATCG+AGG | - | chr3_3:69102595-69102614 | Msa0467680:three_prime_UTR | 45.0% |
| !! | GGAAAGTGTCTCCAAATCGA+GGG | - | chr3_3:69102596-69102615 | Msa0467680:three_prime_UTR | 45.0% |
| GAGGGTTATGATTTCAACCG+TGG | - | chr3_3:69102614-69102633 | Msa0467680:three_prime_UTR | 45.0% | |
| TTGCGTTGAAGCTAGATTGG+AGG | - | chr3_3:69102811-69102830 | Msa0467680:intron | 45.0% | |
| GTTGAAGCTAGATTGGAGGT+TGG | - | chr3_3:69102815-69102834 | Msa0467680:intron | 45.0% | |
| TCACCATGTGATGCTGACAA+AGG | + | chr3_3:69102974-69102993 | None:intergenic | 45.0% | |
| ! | GCTCAATGATTTGCATGGCT+TGG | - | chr3_3:69103248-69103267 | Msa0467680:CDS | 45.0% |
| AGTCGCTTGGCAATTAAGCA+TGG | + | chr3_3:69103295-69103314 | None:intergenic | 45.0% | |
| ATAGCTTCATCAAACCCACC+AGG | + | chr3_3:69103663-69103682 | None:intergenic | 45.0% | |
| TGCCTTGCGCCAACATATAA+AGG | - | chr3_3:69103842-69103861 | Msa0467680:intron | 45.0% | |
| CTCCTTTATATGTTGGCGCA+AGG | + | chr3_3:69103847-69103866 | None:intergenic | 45.0% | |
| TTTGAGCGAAGATAAGCTCC+AGG | + | chr3_3:69103881-69103900 | None:intergenic | 45.0% | |
| GGAGCTTATCTTCGCTCAAA+AGG | - | chr3_3:69103881-69103900 | Msa0467680:intron | 45.0% | |
| GTTGAAGGAGCAAAAGGAAG+AGG | - | chr3_3:69103988-69104007 | Msa0467680:intron | 45.0% | |
| TCAAAACCGGATGGTTTGAC+CGG | - | chr3_3:69104076-69104095 | Msa0467680:intron | 45.0% | |
| TTTACTCAACCTTTCTCCGC+CGG | + | chr3_3:69104421-69104440 | None:intergenic | 45.0% | |
| TGGCAGGAAATAGCTTCTAC+AGG | - | chr3_3:69104575-69104594 | Msa0467680:intron | 45.0% | |
| GTATGGAAACAATGCTGGAG+AGG | - | chr3_3:69104638-69104657 | Msa0467680:intron | 45.0% | |
| ATGATCTCTCCTCAGTACCA+TGG | + | chr3_3:69104826-69104845 | None:intergenic | 45.0% | |
| AATTACTACCGGTCCATCCT+CGG | - | chr3_3:69105406-69105425 | Msa0467680:CDS | 45.0% | |
| TTTAATGGTCTGACCGAGGA+TGG | + | chr3_3:69105422-69105441 | None:intergenic | 45.0% | |
| AAGGTTTAATGGTCTGACCG+AGG | + | chr3_3:69105426-69105445 | None:intergenic | 45.0% | |
| !! | GTCGCTGGTTCAAGGTTTAA+TGG | + | chr3_3:69105437-69105456 | None:intergenic | 45.0% |
| CATTGAATCACTGTAGTCGC+TGG | + | chr3_3:69105452-69105471 | None:intergenic | 45.0% | |
| CCAGGCAACAACAAAAACCA+AGG | + | chr3_3:69105495-69105514 | None:intergenic | 45.0% | |
| !!! | CCTTGGTTTTTGTTGTTGCC+TGG | - | chr3_3:69105492-69105511 | Msa0467680:intron | 45.0% |
| TGAGCACTAAATGTGACTCC+AGG | + | chr3_3:69105513-69105532 | None:intergenic | 45.0% | |
| CTTGTATGCCCAGTAAAGGT+AGG | + | chr3_3:69105720-69105739 | None:intergenic | 45.0% | |
| CTACCTTTACTGGGCATACA+AGG | - | chr3_3:69105718-69105737 | Msa0467680:intron | 45.0% | |
| TTGCCTTGTATGCCCAGTAA+AGG | + | chr3_3:69105724-69105743 | None:intergenic | 45.0% | |
| CCATGTTGCATTCTGTATGC+AGG | + | chr3_3:69105859-69105878 | None:intergenic | 45.0% | |
| CCTGCATACAGAATGCAACA+TGG | - | chr3_3:69105856-69105875 | Msa0467680:intron | 45.0% | |
| TTCCATTCCTTCCAAAACCC+TGG | - | chr3_3:69106033-69106052 | Msa0467680:intron | 45.0% | |
| !!! | AATCAGACCAGGGTTTTGGA+AGG | + | chr3_3:69106043-69106062 | None:intergenic | 45.0% |
| CTATGTCCACAATCAGACCA+GGG | + | chr3_3:69106053-69106072 | None:intergenic | 45.0% | |
| ACTATGTCCACAATCAGACC+AGG | + | chr3_3:69106054-69106073 | None:intergenic | 45.0% | |
| CTGATTGTGGACATAGTGCA+AGG | - | chr3_3:69106057-69106076 | Msa0467680:intron | 45.0% | |
| AACGCCAATATGATGCGCAA+TGG | - | chr3_3:69106263-69106282 | Msa0467680:CDS | 45.0% | |
| TGCACCATTGCGCATCATAT+TGG | + | chr3_3:69106270-69106289 | None:intergenic | 45.0% | |
| ! | TCCAGATGAGGCTGTTTCAT+GGG | - | chr3_3:69106349-69106368 | Msa0467680:CDS | 45.0% |
| GTTTCATGGGGGAAAATACG+AGG | - | chr3_3:69106362-69106381 | Msa0467680:CDS | 45.0% | |
| TCGTTGCATCACAATGTACC+TGG | + | chr3_3:69106507-69106526 | None:intergenic | 45.0% | |
| ATGTTTCAGCAACCAGCAGA+GGG | + | chr3_3:69106537-69106556 | None:intergenic | 45.0% | |
| AATGTTTCAGCAACCAGCAG+AGG | + | chr3_3:69106538-69106557 | None:intergenic | 45.0% | |
| ! | CAGTGTGTTTGAGATCTTGG+TGG | - | chr3_3:69106729-69106748 | Msa0467680:exon | 45.0% |
| !!! | CATTTTTTTAATAAAAAAAA+AGG | + | chr3_3:69104159-69104178 | None:intergenic | 5.0% |
| !!! | AAATTAAAAAGTTATAATTT+TGG | - | chr3_3:69105285-69105304 | Msa0467680:CDS | 5.0% |
| !!! | AATTAAAAAGTTATAATTTT+GGG | - | chr3_3:69105286-69105305 | Msa0467680:CDS | 5.0% |
| ! | TGGCGATTTGCTCCAGAAGA+AGG | + | chr3_3:69102290-69102309 | None:intergenic | 50.0% |
| GAATCGGTGCAACTTGGATC+CGG | + | chr3_3:69102354-69102373 | None:intergenic | 50.0% | |
| GGCACAAAAGCGGTTCGAAT+CGG | + | chr3_3:69102370-69102389 | None:intergenic | 50.0% | |
| CCGGAATGATGGCACAAAAG+CGG | + | chr3_3:69102380-69102399 | None:intergenic | 50.0% | |
| !! | CCGCTTTTGTGCCATCATTC+CGG | - | chr3_3:69102377-69102396 | Msa0467680:three_prime_UTR | 50.0% |
| AGCGGTTCAAACCGGAATGA+TGG | + | chr3_3:69102391-69102410 | None:intergenic | 50.0% | |
| !! | ACCGCTTTTGTTTCAACCCG+TGG | - | chr3_3:69102405-69102424 | Msa0467680:three_prime_UTR | 50.0% |
| GAAGACTGTGGAGTGAACTG+AGG | + | chr3_3:69102555-69102574 | None:intergenic | 50.0% | |
| TTTGGAGACACTTTCCTGCG+AGG | + | chr3_3:69102592-69102611 | None:intergenic | 50.0% | |
| !! | GCTGTTGATAATCGACGCCA+CGG | + | chr3_3:69102634-69102653 | None:intergenic | 50.0% |
| GGGTTGCGTTGAAGCTAGAT+TGG | - | chr3_3:69102808-69102827 | Msa0467680:intron | 50.0% | |
| CAAAACCGGATGGTTTGACC+GGG | - | chr3_3:69104077-69104096 | Msa0467680:intron | 50.0% | |
| TGCAGGAAAGGAATTACCGG+CGG | - | chr3_3:69104402-69104421 | Msa0467680:intron | 50.0% | |
| AAGGAATTACCGGCGGAGAA+AGG | - | chr3_3:69104409-69104428 | Msa0467680:intron | 50.0% | |
| ACTTTCGACCACAGTCATCC+AGG | + | chr3_3:69104472-69104491 | None:intergenic | 50.0% | |
| GAGATATACGGCTATCTGGC+AGG | - | chr3_3:69104559-69104578 | Msa0467680:intron | 50.0% | |
| TCGTGGACCAGTGGTAGATT+TGG | - | chr3_3:69104691-69104710 | Msa0467680:intron | 50.0% | |
| ACCAGTGGTAGATTTGGCCT+TGG | - | chr3_3:69104697-69104716 | Msa0467680:intron | 50.0% | |
| CTGCAGCAGTCAAAATGCCA+AGG | + | chr3_3:69104717-69104736 | None:intergenic | 50.0% | |
| !!! | CTTGGCATTTTGACTGCTGC+AGG | - | chr3_3:69104715-69104734 | Msa0467680:intron | 50.0% |
| !! | CCTCAGTACCATGGTGTCAT+TGG | + | chr3_3:69104817-69104836 | None:intergenic | 50.0% |
| CCAATGACACCATGGTACTG+AGG | - | chr3_3:69104814-69104833 | Msa0467680:intron | 50.0% | |
| ! | ACTCCTGACAGTTCTGGTGA+TGG | - | chr3_3:69105064-69105083 | Msa0467680:intron | 50.0% |
| CTACCATCACCAGAACTGTC+AGG | + | chr3_3:69105070-69105089 | None:intergenic | 50.0% | |
| !! | ACAGTTCTGGTGATGGTAGC+CGG | - | chr3_3:69105071-69105090 | Msa0467680:intron | 50.0% |
| !! | TCACTGTAGTCGCTGGTTCA+AGG | + | chr3_3:69105445-69105464 | None:intergenic | 50.0% |
| !!! | GACCAGGGTTTTGGAAGGAA+TGG | + | chr3_3:69106038-69106057 | None:intergenic | 50.0% |
| ! | CCACAATCAGACCAGGGTTT+TGG | + | chr3_3:69106047-69106066 | None:intergenic | 50.0% |
| CCAAAACCCTGGTCTGATTG+TGG | - | chr3_3:69106044-69106063 | Msa0467680:intron | 50.0% | |
| CATGCAAGTCCTAGCAAGAC+AGG | - | chr3_3:69106197-69106216 | Msa0467680:intron | 50.0% | |
| ! | GTCCAGATGAGGCTGTTTCA+TGG | - | chr3_3:69106348-69106367 | Msa0467680:CDS | 50.0% |
| ! | CCAGATGAGGCTGTTTCATG+GGG | - | chr3_3:69106350-69106369 | Msa0467680:CDS | 50.0% |
| ! | CAGATGAGGCTGTTTCATGG+GGG | - | chr3_3:69106351-69106370 | Msa0467680:CDS | 50.0% |
| AACGATAGCATTCCCTCTGC+TGG | - | chr3_3:69106522-69106541 | Msa0467680:CDS | 50.0% | |
| GTATGACATACAGCCGACCT+TGG | + | chr3_3:69106684-69106703 | None:intergenic | 50.0% | |
| CGGTTCGAATCGGTGCAACT+TGG | + | chr3_3:69102360-69102379 | None:intergenic | 55.0% | |
| TTAGCGACACACGAGTCGCT+TGG | + | chr3_3:69103308-69103327 | None:intergenic | 55.0% | |
| TTCCAGACCGGACATAGGTC+CGG | + | chr3_3:69104105-69104124 | None:intergenic | 55.0% | |
| GAGTCTTCCAGACCGGACAT+AGG | + | chr3_3:69104110-69104129 | None:intergenic | 55.0% | |
| GTACTCGGAGTCTTCCAGAC+CGG | + | chr3_3:69104117-69104136 | None:intergenic | 55.0% | |
| TGGAAGACTCCGAGTACCAG+TGG | - | chr3_3:69104120-69104139 | Msa0467680:intron | 55.0% | |
| AACCTCGAGCCACTGGTACT+CGG | + | chr3_3:69104132-69104151 | None:intergenic | 55.0% | |
| AGGTCTAAACCTCGAGCCAC+TGG | + | chr3_3:69104139-69104158 | None:intergenic | 55.0% | |
| GGTTGCTACCTGGATGACTG+TGG | - | chr3_3:69104461-69104480 | Msa0467680:intron | 55.0% | |
| CGTTGTGGGGAAGTAGTTCG+TGG | - | chr3_3:69104674-69104693 | Msa0467680:intron | 55.0% | |
| GGAAGTAGTTCGTGGACCAG+TGG | - | chr3_3:69104682-69104701 | Msa0467680:intron | 55.0% | |
| GCCAAGGCCAAATCTACCAC+TGG | + | chr3_3:69104701-69104720 | None:intergenic | 55.0% | |
| GCGCAATGGTGCAGACTATG+CGG | - | chr3_3:69106277-69106296 | Msa0467680:CDS | 55.0% | |
| !! | TTCTGGAGCTCGTCCAGATG+AGG | - | chr3_3:69106337-69106356 | Msa0467680:CDS | 55.0% |
| CCCCATGAAACAGCCTCATC+TGG | + | chr3_3:69106353-69106372 | None:intergenic | 55.0% | |
| CGGTTCCCGGTCAAACCATC+CGG | + | chr3_3:69104085-69104104 | None:intergenic | 60.0% | |
| CGGATGGTTTGACCGGGAAC+CGG | - | chr3_3:69104083-69104102 | Msa0467680:intron | 60.0% | |
| AACCGGACCTATGTCCGGTC+TGG | - | chr3_3:69104100-69104119 | Msa0467680:intron | 60.0% | |
| TGGTCTGACCGAGGATGGAC+CGG | + | chr3_3:69105417-69105436 | None:intergenic | 60.0% | |
| TGGCACTCACTGTGGAGCTG+CGG | + | chr3_3:69106636-69106655 | None:intergenic | 60.0% | |
| CCGGACATAGGTCCGGTTCC+CGG | + | chr3_3:69104098-69104117 | None:intergenic | 65.0% | |
| CCGGGAACCGGACCTATGTC+CGG | - | chr3_3:69104095-69104114 | Msa0467680:intron | 65.0% | |
| CTCCGAGTACCAGTGGCTCG+AGG | - | chr3_3:69104127-69104146 | Msa0467680:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 69102178 | 69107068 | 69102178 | ID=Msa0467680;Name=Msa0467680 |
| chr3_3 | mRNA | 69102178 | 69107068 | 69102178 | ID=Msa0467680-mRNA-1;Parent=Msa0467680;Name=Msa0467680-mRNA-1;_AED=0.23;_eAED=0.23;_QI=334|0.83|0.85|1|1|1|7|483|415 |
| chr3_3 | exon | 69102178 | 69102738 | 69102178 | ID=Msa0467680-mRNA-1:exon:16287;Parent=Msa0467680-mRNA-1 |
| chr3_3 | exon | 69102843 | 69103078 | 69102843 | ID=Msa0467680-mRNA-1:exon:16286;Parent=Msa0467680-mRNA-1 |
| chr3_3 | exon | 69103168 | 69103273 | 69103168 | ID=Msa0467680-mRNA-1:exon:16285;Parent=Msa0467680-mRNA-1 |
| chr3_3 | exon | 69103369 | 69103593 | 69103369 | ID=Msa0467680-mRNA-1:exon:16284;Parent=Msa0467680-mRNA-1 |
| chr3_3 | exon | 69105237 | 69105455 | 69105237 | ID=Msa0467680-mRNA-1:exon:16283;Parent=Msa0467680-mRNA-1 |
| chr3_3 | exon | 69106257 | 69106424 | 69106257 | ID=Msa0467680-mRNA-1:exon:16282;Parent=Msa0467680-mRNA-1 |
| chr3_3 | exon | 69106519 | 69107068 | 69106519 | ID=Msa0467680-mRNA-1:exon:16281;Parent=Msa0467680-mRNA-1 |
| chr3_3 | five_prime_UTR | 69106735 | 69107068 | 69106735 | ID=Msa0467680-mRNA-1:five_prime_utr;Parent=Msa0467680-mRNA-1 |
| chr3_3 | CDS | 69106519 | 69106734 | 69106519 | ID=Msa0467680-mRNA-1:cds;Parent=Msa0467680-mRNA-1 |
| chr3_3 | CDS | 69106257 | 69106424 | 69106257 | ID=Msa0467680-mRNA-1:cds;Parent=Msa0467680-mRNA-1 |
| chr3_3 | CDS | 69105237 | 69105455 | 69105237 | ID=Msa0467680-mRNA-1:cds;Parent=Msa0467680-mRNA-1 |
| chr3_3 | CDS | 69103369 | 69103593 | 69103369 | ID=Msa0467680-mRNA-1:cds;Parent=Msa0467680-mRNA-1 |
| chr3_3 | CDS | 69103168 | 69103273 | 69103168 | ID=Msa0467680-mRNA-1:cds;Parent=Msa0467680-mRNA-1 |
| chr3_3 | CDS | 69102843 | 69103078 | 69102843 | ID=Msa0467680-mRNA-1:cds;Parent=Msa0467680-mRNA-1 |
| chr3_3 | CDS | 69102661 | 69102738 | 69102661 | ID=Msa0467680-mRNA-1:cds;Parent=Msa0467680-mRNA-1 |
| chr3_3 | three_prime_UTR | 69102178 | 69102660 | 69102178 | ID=Msa0467680-mRNA-1:three_prime_utr;Parent=Msa0467680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
