Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0380740 | XP_013461721.1 | 77.989 | 368 | 9 | 3 | 1 | 350 | 1 | 314 | 0.0 | 543 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0380740 | sp|Q4V3E2|MRG2_ARATH | 42.462 | 325 | 113 | 3 | 33 | 336 | 52 | 323 | 9.07e-81 | 252 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0380740 | A0A072V241 | 77.989 | 368 | 9 | 3 | 1 | 350 | 1 | 314 | 0.0 | 543 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004920 | Msa0380740 | 0.807766 | 4.304997e-50 | -8.615850e-47 |
| Msa0006070 | Msa0380740 | 0.819938 | 8.926635e-53 | -8.615850e-47 |
| Msa0012040 | Msa0380740 | 0.810138 | 1.337726e-50 | -8.615850e-47 |
| Msa0012060 | Msa0380740 | 0.804537 | 2.060331e-49 | -8.615850e-47 |
| Msa0017510 | Msa0380740 | 0.859699 | 3.452966e-63 | -8.615850e-47 |
| Msa0020930 | Msa0380740 | 0.800976 | 1.119281e-48 | -8.615850e-47 |
| Msa0028640 | Msa0380740 | 0.814168 | 1.767094e-51 | -8.615850e-47 |
| Msa0037700 | Msa0380740 | 0.832814 | 7.623871e-56 | -8.615850e-47 |
| Msa0040450 | Msa0380740 | 0.808464 | 3.057270e-50 | -8.615850e-47 |
| Msa0047050 | Msa0380740 | 0.825115 | 5.588630e-54 | -8.615850e-47 |
| Msa0051770 | Msa0380740 | 0.805119 | 1.557075e-49 | -8.615850e-47 |
| Msa0068680 | Msa0380740 | 0.803309 | 3.707490e-49 | -8.615850e-47 |
| Msa0074200 | Msa0380740 | 0.810585 | 1.071399e-50 | -8.615850e-47 |
| Msa0086650 | Msa0380740 | 0.851694 | 7.509312e-61 | -8.615850e-47 |
| Msa0107020 | Msa0380740 | 0.807158 | 5.794518e-50 | -8.615850e-47 |
| Msa0110970 | Msa0380740 | 0.836264 | 1.035972e-56 | -8.615850e-47 |
| Msa0112750 | Msa0380740 | 0.809949 | 1.469576e-50 | -8.615850e-47 |
| Msa0114060 | Msa0380740 | 0.805971 | 1.031871e-49 | -8.615850e-47 |
| Msa0119850 | Msa0380740 | 0.801124 | 1.043953e-48 | -8.615850e-47 |
| Msa0124340 | Msa0380740 | 0.821239 | 4.486715e-53 | -8.615850e-47 |
| Msa0133130 | Msa0380740 | 0.844414 | 7.671035e-59 | -8.615850e-47 |
| Msa0140780 | Msa0380740 | 0.836679 | 8.126051e-57 | -8.615850e-47 |
| Msa0145440 | Msa0380740 | 0.800310 | 1.530052e-48 | -8.615850e-47 |
| Msa0150820 | Msa0380740 | 0.810981 | 8.797451e-51 | -8.615850e-47 |
| Msa0152430 | Msa0380740 | 0.805633 | 1.214819e-49 | -8.615850e-47 |
| Msa0157290 | Msa0380740 | 0.859816 | 3.182214e-63 | -8.615850e-47 |
| Msa0165210 | Msa0380740 | 0.803068 | 4.158082e-49 | -8.615850e-47 |
| Msa0165220 | Msa0380740 | 0.811990 | 5.310956e-51 | -8.615850e-47 |
| Msa0166870 | Msa0380740 | 0.801635 | 8.203585e-49 | -8.615850e-47 |
| Msa0169860 | Msa0380740 | 0.804666 | 1.936513e-49 | -8.615850e-47 |
| Msa0173990 | Msa0380740 | 0.838050 | 3.619318e-57 | -8.615850e-47 |
| Msa0175390 | Msa0380740 | 0.808994 | 2.355947e-50 | -8.615850e-47 |
| Msa0178930 | Msa0380740 | 0.803982 | 2.687928e-49 | -8.615850e-47 |
| Msa0184960 | Msa0380740 | 0.805962 | 1.036289e-49 | -8.615850e-47 |
| Msa0188830 | Msa0380740 | 0.804723 | 1.883913e-49 | -8.615850e-47 |
| Msa0195000 | Msa0380740 | 0.817318 | 3.509406e-52 | -8.615850e-47 |
| Msa0196130 | Msa0380740 | -0.804306 | 2.301701e-49 | -8.615850e-47 |
| Msa0197660 | Msa0380740 | 0.815055 | 1.124465e-51 | -8.615850e-47 |
| Msa0200260 | Msa0380740 | 0.838781 | 2.345432e-57 | -8.615850e-47 |
| Msa0202950 | Msa0380740 | 0.805856 | 1.090752e-49 | -8.615850e-47 |
| Msa0212990 | Msa0380740 | 0.815025 | 1.141687e-51 | -8.615850e-47 |
| Msa0220580 | Msa0380740 | 0.825862 | 3.717940e-54 | -8.615850e-47 |
| Msa0220740 | Msa0380740 | 0.832783 | 7.762864e-56 | -8.615850e-47 |
| Msa0223690 | Msa0380740 | 0.802310 | 5.960402e-49 | -8.615850e-47 |
| Msa0223740 | Msa0380740 | 0.812133 | 4.941341e-51 | -8.615850e-47 |
| Msa0226890 | Msa0380740 | 0.822049 | 2.916133e-53 | -8.615850e-47 |
| Msa0237070 | Msa0380740 | 0.817026 | 4.082960e-52 | -8.615850e-47 |
| Msa0372660 | Msa0380740 | 0.810880 | 9.251792e-51 | -8.615850e-47 |
| Msa0373160 | Msa0380740 | 0.807686 | 4.478178e-50 | -8.615850e-47 |
| Msa0373930 | Msa0380740 | 0.829202 | 5.872940e-55 | -8.615850e-47 |
| Msa0376350 | Msa0380740 | 0.800952 | 1.131961e-48 | -8.615850e-47 |
| Msa0376590 | Msa0380740 | 0.803724 | 3.041508e-49 | -8.615850e-47 |
| Msa0379640 | Msa0380740 | 0.834164 | 3.511582e-56 | -8.615850e-47 |
| Msa0380740 | Msa0388960 | 0.801284 | 9.683884e-49 | -8.615850e-47 |
| Msa0380740 | Msa0389340 | 0.829032 | 6.457845e-55 | -8.615850e-47 |
| Msa0380740 | Msa0398710 | 0.891458 | 3.899251e-74 | -8.615850e-47 |
| Msa0380740 | Msa0410650 | 0.834310 | 3.227347e-56 | -8.615850e-47 |
| Msa0380740 | Msa0419820 | 0.804014 | 2.647503e-49 | -8.615850e-47 |
| Msa0380740 | Msa0419970 | 0.800603 | 1.333991e-48 | -8.615850e-47 |
| Msa0380740 | Msa0420960 | 0.812893 | 3.371390e-51 | -8.615850e-47 |
| Msa0380740 | Msa0424790 | 0.802152 | 6.424904e-49 | -8.615850e-47 |
| Msa0380740 | Msa0425010 | 0.805611 | 1.227670e-49 | -8.615850e-47 |
| Msa0380740 | Msa0428590 | 0.810172 | 1.315159e-50 | -8.615850e-47 |
| Msa0380740 | Msa0428930 | 0.830305 | 3.165375e-55 | -8.615850e-47 |
| Msa0380740 | Msa0432770 | 0.800067 | 1.714674e-48 | -8.615850e-47 |
| Msa0380740 | Msa0433640 | 0.815650 | 8.294367e-52 | -8.615850e-47 |
| Msa0380740 | Msa0437560 | 0.805947 | 1.043482e-49 | -8.615850e-47 |
| Msa0380740 | Msa0437990 | 0.812285 | 4.578137e-51 | -8.615850e-47 |
| Msa0380740 | Msa0440750 | 0.830571 | 2.724750e-55 | -8.615850e-47 |
| Msa0380740 | Msa0442200 | 0.804473 | 2.123838e-49 | -8.615850e-47 |
| Msa0380740 | Msa0443920 | 0.806242 | 9.044955e-50 | -8.615850e-47 |
| Msa0380740 | Msa0453330 | 0.821117 | 4.787482e-53 | -8.615850e-47 |
| Msa0380740 | Msa0453350 | 0.802409 | 5.687742e-49 | -8.615850e-47 |
| Msa0380740 | Msa0465970 | 0.800163 | 1.639618e-48 | -8.615850e-47 |
| Msa0380740 | Msa0466390 | 0.831937 | 1.257514e-55 | -8.615850e-47 |
| Msa0380740 | Msa0467060 | 0.813339 | 2.691218e-51 | -8.615850e-47 |
| Msa0380740 | Msa0467680 | 0.809218 | 2.109117e-50 | -8.615850e-47 |
| Msa0380740 | Msa0471800 | 0.814657 | 1.377857e-51 | -8.615850e-47 |
| Msa0380740 | Msa0475490 | 0.825615 | 4.254997e-54 | -8.615850e-47 |
| Msa0380740 | Msa0477130 | -0.804752 | 1.857841e-49 | -8.615850e-47 |
| Msa0380740 | Msa0479660 | 0.813748 | 2.187925e-51 | -8.615850e-47 |
| Msa0380740 | Msa0480000 | 0.802534 | 5.361399e-49 | -8.615850e-47 |
| Msa0380740 | Msa0480980 | 0.827611 | 1.422200e-54 | -8.615850e-47 |
| Msa0380740 | Msa0481530 | 0.814413 | 1.560351e-51 | -8.615850e-47 |
| Msa0380740 | Msa0483860 | 0.811703 | 6.131228e-51 | -8.615850e-47 |
| Msa0380740 | Msa0484780 | 0.834834 | 2.383577e-56 | -8.615850e-47 |
| Msa0380740 | Msa0488400 | 0.800965 | 1.125270e-48 | -8.615850e-47 |
| Msa0380740 | Msa0493630 | 0.801072 | 1.069947e-48 | -8.615850e-47 |
| Msa0380740 | Msa0500360 | 0.885130 | 1.059641e-71 | -8.615850e-47 |
| Msa0380740 | Msa0502100 | 0.813195 | 2.894536e-51 | -8.615850e-47 |
| Msa0380740 | Msa0503580 | 0.824656 | 7.171429e-54 | -8.615850e-47 |
| Msa0380740 | Msa0507680 | 0.830122 | 3.507677e-55 | -8.615850e-47 |
| Msa0380740 | Msa0509390 | 0.819511 | 1.117433e-52 | -8.615850e-47 |
| Msa0380740 | Msa0509610 | 0.811306 | 7.476740e-51 | -8.615850e-47 |
| Msa0380740 | Msa0512900 | 0.823557 | 1.298955e-53 | -8.615850e-47 |
| Msa0380740 | Msa0514030 | 0.822179 | 2.720899e-53 | -8.615850e-47 |
| Msa0380740 | Msa0515010 | 0.816543 | 5.238996e-52 | -8.615850e-47 |
| Msa0380740 | Msa0516320 | 0.802131 | 6.490433e-49 | -8.615850e-47 |
| Msa0380740 | Msa0517110 | 0.817479 | 3.228806e-52 | -8.615850e-47 |
| Msa0380740 | Msa0517330 | 0.829219 | 5.816551e-55 | -8.615850e-47 |
| Msa0380740 | Msa0517340 | 0.802592 | 5.214589e-49 | -8.615850e-47 |
| Msa0380740 | Msa0521540 | 0.810775 | 9.747457e-51 | -8.615850e-47 |
| Msa0380740 | Msa0523460 | 0.826402 | 2.767347e-54 | -8.615850e-47 |
| Msa0380740 | Msa0529890 | 0.803473 | 3.428754e-49 | -8.615850e-47 |
| Msa0380740 | Msa0536220 | 0.838799 | 2.319547e-57 | -8.615850e-47 |
| Msa0380740 | Msa0540070 | 0.807136 | 5.856431e-50 | -8.615850e-47 |
| Msa0380740 | Msa0553460 | 0.820813 | 5.625041e-53 | -8.615850e-47 |
| Msa0380740 | Msa0555020 | 0.842312 | 2.793118e-58 | -8.615850e-47 |
| Msa0380740 | Msa0558690 | 0.816220 | 6.187654e-52 | -8.615850e-47 |
| Msa0380740 | Msa0562440 | 0.805124 | 1.553136e-49 | -8.615850e-47 |
| Msa0380740 | Msa0577500 | 0.811507 | 6.763004e-51 | -8.615850e-47 |
| Msa0380740 | Msa0581760 | 0.826081 | 3.298592e-54 | -8.615850e-47 |
| Msa0380740 | Msa0585000 | -0.800981 | 1.116629e-48 | -8.615850e-47 |
| Msa0380740 | Msa0585560 | 0.801135 | 1.038669e-48 | -8.615850e-47 |
| Msa0380740 | Msa0593650 | 0.804634 | 1.965999e-49 | -8.615850e-47 |
| Msa0380740 | Msa0597330 | 0.837638 | 4.618029e-57 | -8.615850e-47 |
| Msa0380740 | Msa0599890 | 0.844648 | 6.635671e-59 | -8.615850e-47 |
| Msa0380740 | Msa0601850 | 0.837263 | 5.764298e-57 | -8.615850e-47 |
| Msa0380740 | Msa0602240 | 0.835308 | 1.810214e-56 | -8.615850e-47 |
| Msa0380740 | Msa0602250 | 0.843924 | 1.038690e-58 | -8.615850e-47 |
| Msa0380740 | Msa0606860 | 0.804448 | 2.149986e-49 | -8.615850e-47 |
| Msa0380740 | Msa0607050 | 0.808381 | 3.184815e-50 | -8.615850e-47 |
| Msa0380740 | Msa0607540 | 0.808829 | 2.554845e-50 | -8.615850e-47 |
| Msa0380740 | Msa0608620 | 0.826873 | 2.135829e-54 | -8.615850e-47 |
| Msa0380740 | Msa0610430 | 0.813913 | 2.011970e-51 | -8.615850e-47 |
| Msa0380740 | Msa0621490 | 0.814210 | 1.730045e-51 | -8.615850e-47 |
| Msa0380740 | Msa0623080 | 0.810150 | 1.330218e-50 | -8.615850e-47 |
| Msa0380740 | Msa0625720 | 0.804414 | 2.185083e-49 | -8.615850e-47 |
| Msa0380740 | Msa0638070 | 0.801751 | 7.767388e-49 | -8.615850e-47 |
| Msa0380740 | Msa0638280 | 0.809013 | 2.333962e-50 | -8.615850e-47 |
| Msa0380740 | Msa0638320 | 0.810925 | 9.043306e-51 | -8.615850e-47 |
| Msa0380740 | Msa0647830 | 0.820068 | 8.339658e-53 | -8.615850e-47 |
| Msa0380740 | Msa0648880 | 0.808599 | 2.860837e-50 | -8.615850e-47 |
| Msa0380740 | Msa0649970 | 0.810840 | 9.437779e-51 | -8.615850e-47 |
| Msa0380740 | Msa0657610 | 0.846306 | 2.359000e-59 | -8.615850e-47 |
| Msa0380740 | Msa0657970 | 0.862275 | 5.685840e-64 | -8.615850e-47 |
| Msa0380740 | Msa0658570 | 0.809731 | 1.636780e-50 | -8.615850e-47 |
| Msa0380740 | Msa0661190 | -0.816791 | 4.608893e-52 | -8.615850e-47 |
| Msa0380740 | Msa0663240 | 0.800961 | 1.127273e-48 | -8.615850e-47 |
| Msa0380740 | Msa0663390 | 0.804618 | 1.981040e-49 | -8.615850e-47 |
| Msa0380740 | Msa0667050 | 0.810402 | 1.173700e-50 | -8.615850e-47 |
| Msa0380740 | Msa0669440 | 0.827941 | 1.184434e-54 | -8.615850e-47 |
| Msa0380740 | Msa0673460 | 0.817013 | 4.109979e-52 | -8.615850e-47 |
| Msa0380740 | Msa0674580 | 0.800072 | 1.711026e-48 | -8.615850e-47 |
| Msa0380740 | Msa0677270 | 0.802850 | 4.612635e-49 | -8.615850e-47 |
| Msa0380740 | Msa0682620 | 0.817011 | 4.113884e-52 | -8.615850e-47 |
| Msa0380740 | Msa0688770 | 0.819535 | 1.103598e-52 | -8.615850e-47 |
| Msa0380740 | Msa0690150 | 0.801889 | 7.277255e-49 | -8.615850e-47 |
| Msa0380740 | Msa0691380 | 0.817700 | 2.878693e-52 | -8.615850e-47 |
| Msa0380740 | Msa0692230 | 0.835568 | 1.556118e-56 | -8.615850e-47 |
| Msa0380740 | Msa0693380 | 0.821431 | 4.053071e-53 | -8.615850e-47 |
| Msa0380740 | Msa0696640 | 0.828101 | 1.083862e-54 | -8.615850e-47 |
| Msa0380740 | Msa0709500 | 0.806162 | 9.404031e-50 | -8.615850e-47 |
| Msa0380740 | Msa0716840 | 0.808261 | 3.378074e-50 | -8.615850e-47 |
| Msa0380740 | Msa0723990 | 0.811203 | 7.872857e-51 | -8.615850e-47 |
| Msa0380740 | Msa0724830 | 0.806263 | 8.956837e-50 | -8.615850e-47 |
| Msa0380740 | Msa0727710 | 0.810628 | 1.048613e-50 | -8.615850e-47 |
| Msa0380740 | Msa0740510 | 0.812589 | 3.928360e-51 | -8.615850e-47 |
| Msa0380740 | Msa0742380 | 0.800941 | 1.138017e-48 | -8.615850e-47 |
| Msa0380740 | Msa0743720 | 0.842502 | 2.487346e-58 | -8.615850e-47 |
| Msa0380740 | Msa0745790 | 0.804650 | 1.951035e-49 | -8.615850e-47 |
| Msa0380740 | Msa0756630 | -0.807913 | 4.007581e-50 | -8.615850e-47 |
| Msa0380740 | Msa0764570 | 0.826392 | 2.782439e-54 | -8.615850e-47 |
| Msa0380740 | Msa0765380 | 0.807744 | 4.352372e-50 | -8.615850e-47 |
| Msa0380740 | Msa0766810 | 0.800251 | 1.573486e-48 | -8.615850e-47 |
| Msa0380740 | Msa0769390 | 0.801315 | 9.542258e-49 | -8.615850e-47 |
| Msa0380740 | Msa0769920 | 0.834362 | 3.131877e-56 | -8.615850e-47 |
| Msa0380740 | Msa0771720 | 0.807256 | 5.523206e-50 | -8.615850e-47 |
| Msa0380740 | Msa0773840 | 0.812701 | 3.714542e-51 | -8.615850e-47 |
| Msa0380740 | Msa0777850 | 0.800644 | 1.308658e-48 | -8.615850e-47 |
| Msa0380740 | Msa0787470 | 0.809865 | 1.531695e-50 | -8.615850e-47 |
| Msa0380740 | Msa0790510 | 0.811461 | 6.919205e-51 | -8.615850e-47 |
| Msa0380740 | Msa0801760 | 0.828280 | 9.815692e-55 | -8.615850e-47 |
| Msa0380740 | Msa0803890 | 0.804243 | 2.372467e-49 | -8.615850e-47 |
| Msa0380740 | Msa0806090 | 0.838435 | 2.880304e-57 | -8.615850e-47 |
| Msa0380740 | Msa0812990 | 0.809713 | 1.651608e-50 | -8.615850e-47 |
| Msa0380740 | Msa0820770 | 0.814306 | 1.647746e-51 | -8.615850e-47 |
| Msa0380740 | Msa0824660 | 0.818717 | 1.694427e-52 | -8.615850e-47 |
| Msa0380740 | Msa0824680 | 0.838853 | 2.247311e-57 | -8.615850e-47 |
| Msa0380740 | Msa0827040 | 0.803821 | 2.902732e-49 | -8.615850e-47 |
| Msa0380740 | Msa0828940 | 0.814452 | 1.529512e-51 | -8.615850e-47 |
| Msa0380740 | Msa0832370 | 0.834205 | 3.428710e-56 | -8.615850e-47 |
| Msa0380740 | Msa0840820 | 0.804998 | 1.650097e-49 | -8.615850e-47 |
| Msa0380740 | Msa0844240 | 0.835066 | 2.083458e-56 | -8.615850e-47 |
| Msa0380740 | Msa0853540 | 0.834182 | 3.474607e-56 | -8.615850e-47 |
| Msa0380740 | Msa0861090 | 0.806626 | 7.508270e-50 | -8.615850e-47 |
| Msa0380740 | Msa0863870 | 0.804041 | 2.612868e-49 | -8.615850e-47 |
| Msa0380740 | Msa0867890 | 0.806063 | 9.867780e-50 | -8.615850e-47 |
| Msa0380740 | Msa0871270 | 0.801420 | 9.079874e-49 | -8.615850e-47 |
| Msa0380740 | Msa0880140 | 0.856912 | 2.334065e-62 | -8.615850e-47 |
| Msa0380740 | Msa0888530 | 0.816813 | 4.556155e-52 | -8.615850e-47 |
| Msa0380740 | Msa0896220 | 0.800376 | 1.483396e-48 | -8.615850e-47 |
| Msa0380740 | Msa0896750 | 0.820686 | 6.016403e-53 | -8.615850e-47 |
| Msa0380740 | Msa0900180 | 0.800695 | 1.277268e-48 | -8.615850e-47 |
| Msa0380740 | Msa0906200 | 0.800857 | 1.183963e-48 | -8.615850e-47 |
| Msa0380740 | Msa0909120 | 0.811302 | 7.491960e-51 | -8.615850e-47 |
| Msa0380740 | Msa0909140 | 0.804727 | 1.879840e-49 | -8.615850e-47 |
| Msa0380740 | Msa0922410 | 0.819325 | 1.232475e-52 | -8.615850e-47 |
| Msa0380740 | Msa0923330 | 0.808827 | 2.557123e-50 | -8.615850e-47 |
| Msa0380740 | Msa0933230 | 0.814308 | 1.645671e-51 | -8.615850e-47 |
| Msa0380740 | Msa0933310 | 0.806195 | 9.255898e-50 | -8.615850e-47 |
| Msa0380740 | Msa0944030 | 0.817199 | 3.732520e-52 | -8.615850e-47 |
| Msa0380740 | Msa0944190 | 0.811589 | 6.490817e-51 | -8.615850e-47 |
| Msa0380740 | Msa0947660 | 0.843449 | 1.392060e-58 | -8.615850e-47 |
| Msa0380740 | Msa0953550 | 0.812245 | 4.671671e-51 | -8.615850e-47 |
| Msa0380740 | Msa0954130 | 0.819348 | 1.217332e-52 | -8.615850e-47 |
| Msa0380740 | Msa0954550 | 0.818140 | 2.289865e-52 | -8.615850e-47 |
| Msa0380740 | Msa0959360 | 0.830783 | 2.417926e-55 | -8.615850e-47 |
| Msa0380740 | Msa0968680 | 0.836880 | 7.219982e-57 | -8.615850e-47 |
| Msa0380740 | Msa0969520 | 0.807261 | 5.510230e-50 | -8.615850e-47 |
| Msa0380740 | Msa0971090 | 0.810444 | 1.148965e-50 | -8.615850e-47 |
| Msa0380740 | Msa0993290 | 0.835516 | 1.603509e-56 | -8.615850e-47 |
| Msa0380740 | Msa0993600 | 0.838139 | 3.434495e-57 | -8.615850e-47 |
| Msa0380740 | Msa0995270 | 0.811767 | 5.939333e-51 | -8.615850e-47 |
| Msa0380740 | Msa1003750 | 0.807077 | 6.026695e-50 | -8.615850e-47 |
| Msa0380740 | Msa1012320 | 0.813735 | 2.202443e-51 | -8.615850e-47 |
| Msa0380740 | Msa1014540 | 0.835656 | 1.477735e-56 | -8.615850e-47 |
| Msa0380740 | Msa1023400 | 0.828457 | 8.894408e-55 | -8.615850e-47 |
| Msa0380740 | Msa1023920 | 0.811613 | 6.414917e-51 | -8.615850e-47 |
| Msa0380740 | Msa1026760 | 0.810996 | 8.728329e-51 | -8.615850e-47 |
| Msa0380740 | Msa1026790 | 0.811262 | 7.643346e-51 | -8.615850e-47 |
| Msa0380740 | Msa1030970 | 0.831826 | 1.339606e-55 | -8.615850e-47 |
| Msa0380740 | Msa1034360 | 0.807851 | 4.130743e-50 | -8.615850e-47 |
| Msa0380740 | Msa1044420 | 0.817712 | 2.861011e-52 | -8.615850e-47 |
| Msa0380740 | Msa1045200 | 0.818140 | 2.289232e-52 | -8.615850e-47 |
| Msa0380740 | Msa1046060 | 0.804104 | 2.535260e-49 | -8.615850e-47 |
| Msa0380740 | Msa1075220 | -0.821888 | 3.178137e-53 | -8.615850e-47 |
| Msa0380740 | Msa1075540 | 0.831758 | 1.392126e-55 | -8.615850e-47 |
| Msa0380740 | Msa1079180 | 0.805070 | 1.594286e-49 | -8.615850e-47 |
| Msa0380740 | Msa1079590 | 0.809783 | 1.595534e-50 | -8.615850e-47 |
| Msa0380740 | Msa1082500 | 0.853322 | 2.580689e-61 | -8.615850e-47 |
| Msa0380740 | Msa1085200 | 0.833590 | 4.885883e-56 | -8.615850e-47 |
| Msa0380740 | Msa1085300 | 0.827679 | 1.369610e-54 | -8.615850e-47 |
| Msa0380740 | Msa1090260 | 0.808490 | 3.018889e-50 | -8.615850e-47 |
| Msa0380740 | Msa1097840 | 0.804038 | 2.616595e-49 | -8.615850e-47 |
| Msa0380740 | Msa1098560 | 0.800869 | 1.177203e-48 | -8.615850e-47 |
| Msa0380740 | Msa1107800 | 0.801940 | 7.101340e-49 | -8.615850e-47 |
| Msa0380740 | Msa1107900 | 0.800277 | 1.554452e-48 | -8.615850e-47 |
| Msa0380740 | Msa1111110 | 0.826648 | 2.417865e-54 | -8.615850e-47 |
| Msa0380740 | Msa1116130 | -0.823696 | 1.205302e-53 | -8.615850e-47 |
| Msa0380740 | Msa1125760 | 0.801346 | 9.401565e-49 | -8.615850e-47 |
| Msa0380740 | Msa1131220 | 0.830898 | 2.265754e-55 | -8.615850e-47 |
| Msa0380740 | Msa1137600 | 0.810846 | 9.408522e-51 | -8.615850e-47 |
| Msa0380740 | Msa1151910 | 0.810652 | 1.036054e-50 | -8.615850e-47 |
| Msa0380740 | Msa1154160 | 0.806912 | 6.532813e-50 | -8.615850e-47 |
| Msa0380740 | Msa1162550 | -0.822578 | 2.197538e-53 | -8.615850e-47 |
| Msa0380740 | Msa1168160 | 0.819609 | 1.061474e-52 | -8.615850e-47 |
| Msa0380740 | Msa1169000 | 0.823180 | 1.591643e-53 | -8.615850e-47 |
| Msa0380740 | Msa1170730 | 0.802692 | 4.973729e-49 | -8.615850e-47 |
| Msa0380740 | Msa1171360 | 0.805959 | 1.037546e-49 | -8.615850e-47 |
| Msa0380740 | Msa1171870 | 0.809420 | 1.909180e-50 | -8.615850e-47 |
| Msa0380740 | Msa1172670 | 0.833263 | 5.895435e-56 | -8.615850e-47 |
| Msa0380740 | Msa1186060 | 0.837397 | 5.326234e-57 | -8.615850e-47 |
| Msa0380740 | Msa1199220 | 0.837078 | 6.425355e-57 | -8.615850e-47 |
| Msa0380740 | Msa1199560 | 0.827153 | 1.830850e-54 | -8.615850e-47 |
| Msa0380740 | Msa1203250 | 0.838874 | 2.218543e-57 | -8.615850e-47 |
| Msa0380740 | Msa1204980 | -0.803871 | 2.834610e-49 | -8.615850e-47 |
| Msa0380740 | Msa1205010 | -0.806691 | 7.272885e-50 | -8.615850e-47 |
| Msa0380740 | Msa1205130 | 0.847621 | 1.030244e-59 | -8.615850e-47 |
| Msa0380740 | Msa1206020 | 0.814004 | 1.920724e-51 | -8.615850e-47 |
| Msa0380740 | Msa1212940 | 0.827491 | 1.519544e-54 | -8.615850e-47 |
| Msa0380740 | Msa1214890 | 0.808420 | 3.123863e-50 | -8.615850e-47 |
| Msa0380740 | Msa1217810 | 0.801232 | 9.923759e-49 | -8.615850e-47 |
| Msa0380740 | Msa1222970 | 0.816074 | 6.670318e-52 | -8.615850e-47 |
| Msa0380740 | Msa1228210 | 0.840338 | 9.234993e-58 | -8.615850e-47 |
| Msa0380740 | Msa1228590 | 0.802933 | 4.433365e-49 | -8.615850e-47 |
| Msa0380740 | Msa1233500 | 0.834894 | 2.301338e-56 | -8.615850e-47 |
| Msa0380740 | Msa1233890 | 0.812985 | 3.218629e-51 | -8.615850e-47 |
| Msa0380740 | Msa1238930 | 0.820972 | 5.171658e-53 | -8.615850e-47 |
| Msa0380740 | Msa1242220 | 0.838203 | 3.305833e-57 | -8.615850e-47 |
| Msa0380740 | Msa1242230 | 0.811017 | 8.640758e-51 | -8.615850e-47 |
| Msa0380740 | Msa1242240 | 0.812244 | 4.674145e-51 | -8.615850e-47 |
| Msa0380740 | Msa1244250 | 0.817394 | 3.374023e-52 | -8.615850e-47 |
| Msa0380740 | Msa1244610 | 0.803243 | 3.825150e-49 | -8.615850e-47 |
| Msa0380740 | Msa1247250 | 0.804343 | 2.260747e-49 | -8.615850e-47 |
| Msa0380740 | Msa1251730 | 0.807064 | 6.065128e-50 | -8.615850e-47 |
| Msa0380740 | Msa1252140 | 0.833698 | 4.591692e-56 | -8.615850e-47 |
| Msa0380740 | Msa1253020 | 0.818859 | 1.572950e-52 | -8.615850e-47 |
| Msa0380740 | Msa1256540 | -0.802235 | 6.176633e-49 | -8.615850e-47 |
| Msa0380740 | Msa1264020 | 0.812513 | 4.083298e-51 | -8.615850e-47 |
| Msa0380740 | Msa1271210 | 0.803105 | 4.085590e-49 | -8.615850e-47 |
| Msa0380740 | Msa1271280 | 0.836328 | 9.977915e-57 | -8.615850e-47 |
| Msa0380740 | Msa1271290 | 0.830491 | 2.849728e-55 | -8.615850e-47 |
| Msa0380740 | Msa1271300 | 0.843395 | 1.438483e-58 | -8.615850e-47 |
| Msa0380740 | Msa1278840 | 0.834034 | 3.784617e-56 | -8.615850e-47 |
| Msa0380740 | Msa1279210 | 0.840422 | 8.778020e-58 | -8.615850e-47 |
| Msa0380740 | Msa1283840 | 0.808838 | 2.543636e-50 | -8.615850e-47 |
| Msa0380740 | Msa1283860 | 0.841050 | 6.010336e-58 | -8.615850e-47 |
| Msa0380740 | Msa1284260 | 0.820366 | 7.124113e-53 | -8.615850e-47 |
| Msa0380740 | Msa1284680 | 0.808470 | 3.049308e-50 | -8.615850e-47 |
| Msa0380740 | Msa1288420 | 0.801397 | 9.179622e-49 | -8.615850e-47 |
| Msa0380740 | Msa1289280 | 0.812998 | 3.196389e-51 | -8.615850e-47 |
| Msa0380740 | Msa1295450 | 0.805707 | 1.171977e-49 | -8.615850e-47 |
| Msa0380740 | Msa1296960 | -0.805319 | 1.413804e-49 | -8.615850e-47 |
| Msa0380740 | Msa1305190 | 0.817999 | 2.464457e-52 | -8.615850e-47 |
| Msa0380740 | Msa1305340 | 0.835643 | 1.488860e-56 | -8.615850e-47 |
| Msa0380740 | Msa1306430 | 0.809743 | 1.627450e-50 | -8.615850e-47 |
| Msa0380740 | Msa1306840 | 0.807658 | 4.540250e-50 | -8.615850e-47 |
| Msa0380740 | Msa1306850 | 0.802039 | 6.777954e-49 | -8.615850e-47 |
| Msa0380740 | Msa1308380 | 0.856642 | 2.803122e-62 | -8.615850e-47 |
| Msa0380740 | Msa1314170 | 0.811626 | 6.370791e-51 | -8.615850e-47 |
| Msa0380740 | Msa1314340 | 0.830654 | 2.599907e-55 | -8.615850e-47 |
| Msa0380740 | Msa1318240 | 0.841286 | 5.211723e-58 | -8.615850e-47 |
| Msa0380740 | Msa1318990 | 0.803028 | 4.238692e-49 | -8.615850e-47 |
| Msa0380740 | Msa1320620 | 0.805063 | 1.599367e-49 | -8.615850e-47 |
| Msa0380740 | Msa1320740 | 0.815449 | 9.192890e-52 | -8.615850e-47 |
| Msa0380740 | Msa1322190 | 0.807534 | 4.823647e-50 | -8.615850e-47 |
| Msa0380740 | Msa1322860 | 0.821605 | 3.693446e-53 | -8.615850e-47 |
| Msa0380740 | Msa1322890 | 0.844422 | 7.634758e-59 | -8.615850e-47 |
| Msa0380740 | Msa1324500 | 0.814515 | 1.481242e-51 | -8.615850e-47 |
| Msa0380740 | Msa1324550 | 0.827802 | 1.279473e-54 | -8.615850e-47 |
| Msa0380740 | Msa1324780 | 0.805026 | 1.628048e-49 | -8.615850e-47 |
| Msa0380740 | Msa1327050 | 0.823350 | 1.452115e-53 | -8.615850e-47 |
| Msa0380740 | Msa1327680 | 0.818801 | 1.621572e-52 | -8.615850e-47 |
| Msa0380740 | Msa1328700 | 0.827529 | 1.488133e-54 | -8.615850e-47 |
| Msa0380740 | Msa1328850 | 0.802341 | 5.873960e-49 | -8.615850e-47 |
| Msa0380740 | Msa1331000 | 0.801398 | 9.174167e-49 | -8.615850e-47 |
| Msa0380740 | Msa1331910 | 0.812744 | 3.633325e-51 | -8.615850e-47 |
| Msa0380740 | Msa1333410 | 0.804876 | 1.749835e-49 | -8.615850e-47 |
| Msa0380740 | Msa1340650 | 0.828892 | 6.982066e-55 | -8.615850e-47 |
| Msa0380740 | Msa1342430 | 0.821420 | 4.077076e-53 | -8.615850e-47 |
| Msa0380740 | Msa1351620 | 0.801599 | 8.346398e-49 | -8.615850e-47 |
| Msa0380740 | Msa1357530 | 0.820346 | 7.199346e-53 | -8.615850e-47 |
| Msa0380740 | Msa1359040 | 0.834536 | 2.831422e-56 | -8.615850e-47 |
| Msa0380740 | Msa1360060 | 0.803621 | 3.193730e-49 | -8.615850e-47 |
| Msa0380740 | Msa1367080 | 0.819733 | 9.947200e-53 | -8.615850e-47 |
| Msa0380740 | Msa1372760 | 0.824969 | 6.051059e-54 | -8.615850e-47 |
| Msa0380740 | Msa1375170 | 0.804017 | 2.643069e-49 | -8.615850e-47 |
| Msa0380740 | Msa1376890 | 0.800990 | 1.112004e-48 | -8.615850e-47 |
| Msa0380740 | Msa1384350 | 0.839144 | 1.888547e-57 | -8.615850e-47 |
| Msa0380740 | Msa1385670 | 0.809487 | 1.847187e-50 | -8.615850e-47 |
| Msa0380740 | Msa1389830 | 0.806679 | 7.318294e-50 | -8.615850e-47 |
| Msa0380740 | Msa1390050 | 0.826506 | 2.612863e-54 | -8.615850e-47 |
| Msa0380740 | Msa1392260 | 0.810458 | 1.141074e-50 | -8.615850e-47 |
| Msa0380740 | Msa1395660 | 0.809427 | 1.902428e-50 | -8.615850e-47 |
| Msa0380740 | Msa1409870 | 0.806832 | 6.791685e-50 | -8.615850e-47 |
| Msa0380740 | Msa1411020 | 0.809325 | 2.000471e-50 | -8.615850e-47 |
| Msa0380740 | Msa1411070 | 0.831407 | 1.698510e-55 | -8.615850e-47 |
| Msa0380740 | Msa1415640 | 0.803732 | 3.029246e-49 | -8.615850e-47 |
| Msa0380740 | Msa1424290 | 0.806655 | 7.403282e-50 | -8.615850e-47 |
| Msa0380740 | Msa1424450 | 0.800553 | 1.365523e-48 | -8.615850e-47 |
| Msa0380740 | Msa1426000 | 0.804686 | 1.917302e-49 | -8.615850e-47 |
| Msa0380740 | Msa1429150 | 0.801721 | 7.878112e-49 | -8.615850e-47 |
| Msa0380740 | Msa1429900 | 0.817324 | 3.497965e-52 | -8.615850e-47 |
| Msa0380740 | Msa1430680 | 0.810759 | 9.826632e-51 | -8.615850e-47 |
| Msa0380740 | Msa1434350 | 0.808150 | 3.568219e-50 | -8.615850e-47 |
| Msa0380740 | Msa1435370 | 0.803480 | 3.417017e-49 | -8.615850e-47 |
| Msa0380740 | Msa1438250 | 0.800773 | 1.231548e-48 | -8.615850e-47 |
| Msa0380740 | Msa1439320 | 0.809992 | 1.438335e-50 | -8.615850e-47 |
| Msa0380740 | Msa1440000 | 0.824828 | 6.533083e-54 | -8.615850e-47 |
| Msa0380740 | Msa1440910 | 0.805543 | 1.268936e-49 | -8.615850e-47 |
| Msa0380740 | Msa1445610 | -0.803003 | 4.289856e-49 | -8.615850e-47 |
| Msa0380740 | Msa1449820 | 0.811264 | 7.635358e-51 | -8.615850e-47 |
| Msa0380740 | Msa1451550 | 0.801284 | 9.680820e-49 | -8.615850e-47 |
| Msa0380740 | Msa1451620 | -0.800177 | 1.628676e-48 | -8.615850e-47 |
| Msa0380740 | Msa1452240 | 0.838427 | 2.894720e-57 | -8.615850e-47 |
| Msa0380740 | Msa1453710 | 0.803847 | 2.866839e-49 | -8.615850e-47 |
| Msa0380740 | Msa1454120 | 0.824106 | 9.661097e-54 | -8.615850e-47 |
| Msa0380740 | Msa1459950 | 0.802244 | 6.150864e-49 | -8.615850e-47 |
| Msa0380740 | Msa1460020 | 0.805066 | 1.597426e-49 | -8.615850e-47 |
| Msa0380740 | Msa1460240 | 0.816363 | 5.747842e-52 | -8.615850e-47 |
| Msa0380740 | Msa1463670 | 0.811180 | 7.966175e-51 | -8.615850e-47 |
| Msa0380740 | Msa1464940 | 0.854467 | 1.207594e-61 | -8.615850e-47 |
| Msa0238890 | Msa0380740 | 0.807711 | 4.424118e-50 | -8.615850e-47 |
| Msa0239800 | Msa0380740 | 0.812241 | 4.680019e-51 | -8.615850e-47 |
| Msa0242480 | Msa0380740 | 0.801188 | 1.013094e-48 | -8.615850e-47 |
| Msa0243100 | Msa0380740 | 0.839679 | 1.371635e-57 | -8.615850e-47 |
| Msa0243710 | Msa0380740 | 0.814676 | 1.364389e-51 | -8.615850e-47 |
| Msa0246430 | Msa0380740 | 0.800353 | 1.499689e-48 | -8.615850e-47 |
| Msa0258760 | Msa0380740 | 0.812802 | 3.530011e-51 | -8.615850e-47 |
| Msa0262340 | Msa0380740 | 0.801190 | 1.011892e-48 | -8.615850e-47 |
| Msa0270100 | Msa0380740 | 0.827250 | 1.735464e-54 | -8.615850e-47 |
| Msa0270270 | Msa0380740 | 0.820303 | 7.364053e-53 | -8.615850e-47 |
| Msa0279790 | Msa0380740 | 0.811199 | 7.887750e-51 | -8.615850e-47 |
| Msa0281260 | Msa0380740 | 0.802631 | 5.118207e-49 | -8.615850e-47 |
| Msa0282250 | Msa0380740 | 0.815692 | 8.115098e-52 | -8.615850e-47 |
| Msa0283450 | Msa0380740 | 0.809464 | 1.867737e-50 | -8.615850e-47 |
| Msa0283520 | Msa0380740 | 0.805639 | 1.211542e-49 | -8.615850e-47 |
| Msa0284420 | Msa0380740 | 0.814309 | 1.645258e-51 | -8.615850e-47 |
| Msa0287650 | Msa0380740 | 0.843138 | 1.684831e-58 | -8.615850e-47 |
| Msa0288100 | Msa0380740 | 0.814894 | 1.221164e-51 | -8.615850e-47 |
| Msa0296560 | Msa0380740 | 0.800755 | 1.242121e-48 | -8.615850e-47 |
| Msa0298700 | Msa0380740 | 0.802700 | 4.953486e-49 | -8.615850e-47 |
| Msa0308830 | Msa0380740 | 0.800100 | 1.688374e-48 | -8.615850e-47 |
| Msa0309560 | Msa0380740 | 0.809183 | 2.146169e-50 | -8.615850e-47 |
| Msa0315290 | Msa0380740 | 0.802627 | 5.128552e-49 | -8.615850e-47 |
| Msa0317510 | Msa0380740 | 0.820110 | 8.154584e-53 | -8.615850e-47 |
| Msa0320100 | Msa0380740 | 0.814161 | 1.773822e-51 | -8.615850e-47 |
| Msa0321860 | Msa0380740 | 0.801140 | 1.035973e-48 | -8.615850e-47 |
| Msa0322690 | Msa0380740 | 0.800029 | 1.745936e-48 | -8.615850e-47 |
| Msa0323610 | Msa0380740 | 0.804160 | 2.468384e-49 | -8.615850e-47 |
| Msa0332000 | Msa0380740 | 0.810556 | 1.087025e-50 | -8.615850e-47 |
| Msa0335040 | Msa0380740 | 0.815972 | 7.027381e-52 | -8.615850e-47 |
| Msa0336420 | Msa0380740 | 0.839390 | 1.630315e-57 | -8.615850e-47 |
| Msa0337620 | Msa0380740 | 0.808594 | 2.867938e-50 | -8.615850e-47 |
| Msa0338110 | Msa0380740 | 0.812970 | 3.242976e-51 | -8.615850e-47 |
| Msa0340090 | Msa0380740 | 0.806729 | 7.140379e-50 | -8.615850e-47 |
| Msa0342340 | Msa0380740 | -0.802845 | 4.623739e-49 | -8.615850e-47 |
| Msa0342360 | Msa0380740 | 0.802370 | 5.794123e-49 | -8.615850e-47 |
| Msa0344830 | Msa0380740 | 0.803539 | 3.321298e-49 | -8.615850e-47 |
| Msa0344980 | Msa0380740 | 0.802665 | 5.037031e-49 | -8.615850e-47 |
| Msa0345970 | Msa0380740 | 0.826985 | 2.007960e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0380740 | MtrunA17_Chr3g0134331 | 77.989 | 368 | 9 | 3 | 1 | 350 | 1 | 314 | 0.0 | 543 |
| Msa0380740 | MtrunA17_Chr4g0053451 | 41.713 | 362 | 116 | 7 | 2 | 330 | 6 | 305 | 3.07e-76 | 237 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0380740 | AT1G02740.1 | 42.462 | 325 | 113 | 3 | 33 | 336 | 52 | 323 | 9.22e-82 | 252 |
| Msa0380740 | AT4G37280.1 | 39.181 | 342 | 121 | 5 | 33 | 341 | 29 | 316 | 7.11e-75 | 234 |
Find 67 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACGATCCACGAGGCTTTC+TGG | 0.172555 | 3_1:-82703463 | None:intergenic |
| TGCTGTTCTCAACATCTTCT+TGG | 0.245431 | 3_1:-82706919 | None:intergenic |
| TAGGAGGTGTTCTTTGTTGC+TGG | 0.251794 | 3_1:+82702765 | Msa0380740:five_prime_UTR |
| CACCTAGTGCTACTGTGTTT+TGG | 0.283542 | 3_1:-82702842 | None:intergenic |
| AAGGGAGAGAAACTATTTAA+AGG | 0.289039 | 3_1:+82707094 | Msa0380740:three_prime_UTR |
| CATAAGTGTCTTAGCTCTTA+AGG | 0.290922 | 3_1:+82706367 | Msa0380740:CDS |
| AATTGCTTCTTTAGTGTTAG+TGG | 0.296530 | 3_1:-82705300 | None:intergenic |
| GAGCATTTGTTACGTCTCTT+TGG | 0.315634 | 3_1:+82706265 | Msa0380740:CDS |
| AACATCCGTATTTCCATAAC+AGG | 0.319709 | 3_1:-82706441 | None:intergenic |
| TATCGTTTGGACAAGCTTCT+TGG | 0.319781 | 3_1:-82706216 | None:intergenic |
| TTGAATATGTCGTTCACATT+AGG | 0.321893 | 3_1:-82705550 | None:intergenic |
| CTTGCACTTGATGAGAAATA+TGG | 0.334212 | 3_1:+82703426 | Msa0380740:CDS |
| CACAAATACTTGACTTTCTC+AGG | 0.343256 | 3_1:+82706720 | Msa0380740:CDS |
| AAGAAGAACTAGAATGAAAA+TGG | 0.345730 | 3_1:+82702867 | Msa0380740:exon |
| TCAAGTGTTACTTGTAGTAT+TGG | 0.370525 | 3_1:+82707049 | Msa0380740:three_prime_UTR |
| GTTGCACTTGCACCCTGTTA+TGG | 0.379206 | 3_1:+82706428 | Msa0380740:CDS |
| TAGATTTAATTAGTTGTTCA+AGG | 0.381785 | 3_1:+82707133 | Msa0380740:three_prime_UTR |
| AAAGAATGATTCTCTGGTTA+AGG | 0.387942 | 3_1:+82704980 | Msa0380740:CDS |
| TTGTTCCATGCTAACATTGA+AGG | 0.392194 | 3_1:+82706674 | Msa0380740:CDS |
| TTTACTGCAGTTGGGATGAA+TGG | 0.398180 | 3_1:+82703352 | Msa0380740:intron |
| TAATTAGTTGTTCAAGGAAA+AGG | 0.413446 | 3_1:+82707139 | Msa0380740:three_prime_UTR |
| TTTGCAAAATGCTGGCCATT+TGG | 0.416533 | 3_1:+82706475 | Msa0380740:CDS |
| ATCGTTCCTTCTGCTATATA+TGG | 0.417923 | 3_1:+82706238 | Msa0380740:CDS |
| AGGAGGTGTTCTTTGTTGCT+GGG | 0.420028 | 3_1:+82702766 | Msa0380740:five_prime_UTR |
| GCAGAAGGAACGATATCGTT+TGG | 0.430072 | 3_1:-82706229 | None:intergenic |
| TATCTGACCATTCGAACTCT+TGG | 0.433463 | 3_1:-82703484 | None:intergenic |
| AGAATGCTTGTTACAAATGC+AGG | 0.437753 | 3_1:+82706993 | Msa0380740:three_prime_UTR |
| GATTACAGATTGAAGAAAAG+TGG | 0.438131 | 3_1:+82705583 | Msa0380740:CDS |
| TCTCTCCCTTAATCCTGAAA+AGG | 0.451248 | 3_1:-82707081 | None:intergenic |
| AAAACGAAAGAATGATTCTC+TGG | 0.464533 | 3_1:+82704974 | Msa0380740:CDS |
| TGCACCCTGTTATGGAAATA+CGG | 0.466904 | 3_1:+82706436 | Msa0380740:CDS |
| TCCTTTCATAATTTCTTCAA+CGG | 0.472345 | 3_1:-82706128 | None:intergenic |
| CTTGGACATGATAAGAAGAA+AGG | 0.478796 | 3_1:-82706901 | None:intergenic |
| TTTGAGTTTATTACTCATCT+CGG | 0.485685 | 3_1:+82705333 | Msa0380740:CDS |
| CGACACATTGATAGAACTCC+AGG | 0.487335 | 3_1:+82706697 | Msa0380740:CDS |
| TCCTTCGTCGTAAGGAGAAA+CGG | 0.492473 | 3_1:-82702965 | None:intergenic |
| TTATTGTACAAGAGCATCAC+TGG | 0.493203 | 3_1:-82706178 | None:intergenic |
| ACTTTCTCTCCTTCGTCGTA+AGG | 0.502889 | 3_1:-82702973 | None:intergenic |
| TCCGTTGAAGAAATTATGAA+AGG | 0.507459 | 3_1:+82706127 | Msa0380740:CDS |
| TGAATGTTGACAAGTTTGTC+CGG | 0.509456 | 3_1:-82705273 | None:intergenic |
| TTACTGCAGTTGGGATGAAT+GGG | 0.516086 | 3_1:+82703353 | Msa0380740:intron |
| TTCTTGTCTTTATGAAGCCA+AGG | 0.516398 | 3_1:+82703011 | Msa0380740:CDS |
| GAAAGTCAAGTATTTGTGCC+TGG | 0.560002 | 3_1:-82706715 | None:intergenic |
| TGTTATGGAAATACGGATGT+TGG | 0.573911 | 3_1:+82706443 | Msa0380740:CDS |
| TCCGTTTCTCCTTACGACGA+AGG | 0.583883 | 3_1:+82702964 | Msa0380740:CDS |
| TGCAAGTGCAACAATTAAGT+CGG | 0.584029 | 3_1:-82706417 | None:intergenic |
| TTAGCATGGAACAATAACTC+TGG | 0.593094 | 3_1:-82706665 | None:intergenic |
| GGATCGTCCAAGAGTTCGAA+TGG | 0.602928 | 3_1:+82703477 | Msa0380740:CDS |
| AAATGTAATGCAGTTGCAAG+AGG | 0.606984 | 3_1:+82704948 | Msa0380740:intron |
| TGTGTGAGGCTGATTCCAAA+TGG | 0.612083 | 3_1:-82706490 | None:intergenic |
| GAATGCTTGTTACAAATGCA+GGG | 0.615375 | 3_1:+82706994 | Msa0380740:three_prime_UTR |
| TGTCGCCTTCAATGTTAGCA+TGG | 0.620025 | 3_1:-82706679 | None:intergenic |
| TGCAGTTGGGATGAATGGGT+TGG | 0.622269 | 3_1:+82703357 | Msa0380740:intron |
| TTTGGAATCAGCCTCACACA+TGG | 0.625253 | 3_1:+82706493 | Msa0380740:CDS |
| TCAGCACCATATATAGCAGA+AGG | 0.633177 | 3_1:-82706244 | None:intergenic |
| GTTTATTACTCATCTCGGCA+AGG | 0.637047 | 3_1:+82705338 | Msa0380740:CDS |
| TTGGAATCAGCCTCACACAT+GGG | 0.640684 | 3_1:+82706494 | Msa0380740:CDS |
| ATAATATCACATAGCTTCTG+CGG | 0.641242 | 3_1:+82706966 | Msa0380740:exon |
| AACCAAAACACAGTAGCACT+AGG | 0.647095 | 3_1:+82702840 | Msa0380740:five_prime_UTR |
| CTTCATAAAGACAAGAAGTG+TGG | 0.647600 | 3_1:-82703005 | None:intergenic |
| TAGCAATAAACCCATGTGTG+AGG | 0.649617 | 3_1:-82706504 | None:intergenic |
| GAACTCTTGGACGATCCACG+AGG | 0.665911 | 3_1:-82703471 | None:intergenic |
| AACATACTGAGGAAAATATG+CGG | 0.687491 | 3_1:+82703397 | Msa0380740:CDS |
| AAGAATGCCAGAAAGCCTCG+TGG | 0.700259 | 3_1:+82703456 | Msa0380740:CDS |
| TCGTTCACATTAGGAGTACG+AGG | 0.705008 | 3_1:-82705541 | None:intergenic |
| TCGATTGATGAAACATACTG+AGG | 0.706974 | 3_1:+82703386 | Msa0380740:CDS |
| ACATCCGTATTTCCATAACA+GGG | 0.747296 | 3_1:-82706440 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTTAAATTTAACATGAT+TGG | + | chr3_1:82704024-82704043 | Msa0380740:intron | 10.0% |
| !! | AATTTAAATTTAACATGATT+GGG | + | chr3_1:82704025-82704044 | Msa0380740:intron | 10.0% |
| !! | TAATTTAACATAAAATTAAG+AGG | - | chr3_1:82706758-82706777 | None:intergenic | 10.0% |
| !!! | TTGTTTAACCTATTAATTTT+CGG | - | chr3_1:82703111-82703130 | None:intergenic | 15.0% |
| !!! | ATGTGAATTGTATTTTTAAT+AGG | - | chr3_1:82703949-82703968 | None:intergenic | 15.0% |
| !! | TATTAAAAATACAATTCACA+TGG | + | chr3_1:82703948-82703967 | Msa0380740:intron | 15.0% |
| !!! | TTGTTATTAGTATTATTTTC+AGG | + | chr3_1:82704073-82704092 | Msa0380740:intron | 15.0% |
| !!! | TGTTATTAGTATTATTTTCA+GGG | + | chr3_1:82704074-82704093 | Msa0380740:intron | 15.0% |
| !!! | TATTTTAATTTCATATGCTT+TGG | + | chr3_1:82704332-82704351 | Msa0380740:intron | 15.0% |
| !!! | TTTAAATTTTAATTTGTACC+AGG | + | chr3_1:82705014-82705033 | Msa0380740:intron | 15.0% |
| !! | TATTTATTCAGTCAATATTT+AGG | + | chr3_1:82705888-82705907 | Msa0380740:intron | 15.0% |
| !! | TTAAATGTTAAATTAGTCAT+TGG | + | chr3_1:82706794-82706813 | Msa0380740:intron | 15.0% |
| !!! | ATTTTTTTTTGGAGTAAAGT+AGG | + | chr3_1:82702746-82702765 | Msa0380740:five_prime_UTR | 20.0% |
| !!! | GTGTTTTGGTTTTTATTAAA+TGG | - | chr3_1:82702831-82702850 | None:intergenic | 20.0% |
| !! | TATAGTGAAAATGTTGAATT+AGG | - | chr3_1:82703083-82703102 | None:intergenic | 20.0% |
| !! | ATAGTATAAATAGTAGAGAT+AGG | + | chr3_1:82703580-82703599 | Msa0380740:intron | 20.0% |
| !!! | AAGTACTTTTTTTTTGTTGA+AGG | - | chr3_1:82703821-82703840 | None:intergenic | 20.0% |
| !! | CATGTTAAATTTAAATTACG+AGG | - | chr3_1:82704022-82704041 | None:intergenic | 20.0% |
| !!! | GTTATTAGTATTATTTTCAG+GGG | + | chr3_1:82704075-82704094 | Msa0380740:intron | 20.0% |
| !! | AATGCCATAAAAAGTTTAAT+AGG | - | chr3_1:82704245-82704264 | None:intergenic | 20.0% |
| !!! | TATATCCTTATCATTTTGTA+TGG | - | chr3_1:82704363-82704382 | None:intergenic | 20.0% |
| !!! | AATTTTCTTTTGAGTTTGAA+TGG | - | chr3_1:82704467-82704486 | None:intergenic | 20.0% |
| !! | ATTCAAACTCAAAAGAAAAT+TGG | + | chr3_1:82704466-82704485 | Msa0380740:intron | 20.0% |
| !! | TTAGGAATGTAATCATTATA+GGG | + | chr3_1:82704628-82704647 | Msa0380740:intron | 20.0% |
| !! | TTCTTTGTAGAAAAGATAAT+AGG | + | chr3_1:82704666-82704685 | Msa0380740:intron | 20.0% |
| !!! | TTATTTTTCTTGTAGTTATG+TGG | + | chr3_1:82704854-82704873 | Msa0380740:intron | 20.0% |
| !! | TATCATATATGATTATTTCC+TGG | - | chr3_1:82705035-82705054 | None:intergenic | 20.0% |
| !! | ATAAACTATGTCAAATTAGT+CGG | + | chr3_1:82705100-82705119 | Msa0380740:intron | 20.0% |
| !!! | TTACAACTTTTTTTGACTAT+AGG | + | chr3_1:82705194-82705213 | Msa0380740:intron | 20.0% |
| !!! | TACAACTTTTTTTGACTATA+GGG | + | chr3_1:82705195-82705214 | Msa0380740:intron | 20.0% |
| !! | ACTATAGGGTATAATATAAT+TGG | + | chr3_1:82705209-82705228 | Msa0380740:intron | 20.0% |
| !! | TTTATTGTTTGCTTAATATC+AGG | + | chr3_1:82705233-82705252 | Msa0380740:intron | 20.0% |
| !!! | TATATATCATTTTGGAGTAA+CGG | + | chr3_1:82705697-82705716 | Msa0380740:intron | 20.0% |
| !! | ATCTAATTGTAAAAAGATTG+AGG | - | chr3_1:82705843-82705862 | None:intergenic | 20.0% |
| !!! | AAGCTGTTATTTTAGAAAAA+GGG | - | chr3_1:82705869-82705888 | None:intergenic | 20.0% |
| !!! | TAAGCTGTTATTTTAGAAAA+AGG | - | chr3_1:82705870-82705889 | None:intergenic | 20.0% |
| !! | ATTACAGTTTAATTCTATGT+TGG | + | chr3_1:82706088-82706107 | Msa0380740:intron | 20.0% |
| !! | TTTAATTCTATGTTGGATAT+AGG | + | chr3_1:82706095-82706114 | Msa0380740:intron | 20.0% |
| !! | TAGATTTAATTAGTTGTTCA+AGG | + | chr3_1:82707133-82707152 | Msa0380740:three_prime_UTR | 20.0% |
| ! | AAGAAGAACTAGAATGAAAA+TGG | + | chr3_1:82702867-82702886 | Msa0380740:exon | 25.0% |
| ! | GGTTTAAATAAGAACGAAAA+AGG | - | chr3_1:82703062-82703081 | None:intergenic | 25.0% |
| ! | ATACTCTTCCGAAAATTAAT+AGG | + | chr3_1:82703100-82703119 | Msa0380740:intron | 25.0% |
| ! | TTGAATACAAACATAAACGA+TGG | + | chr3_1:82703132-82703151 | Msa0380740:intron | 25.0% |
| !!! | TTTTGTTTTCGTAACTCTAA+GGG | + | chr3_1:82703219-82703238 | Msa0380740:intron | 25.0% |
| !!! | ATTCAATTTTGGTTGTTTCA+GGG | + | chr3_1:82703242-82703261 | Msa0380740:intron | 25.0% |
| ! | TATGCATGCTATAAAAAACA+AGG | - | chr3_1:82703563-82703582 | None:intergenic | 25.0% |
| !!! | GTTGTTTTCATAACCTATTT+TGG | - | chr3_1:82703717-82703736 | None:intergenic | 25.0% |
| ! | ATAAATTATATGGTCCTGTT+TGG | - | chr3_1:82703889-82703908 | None:intergenic | 25.0% |
| ! | ACAAGTTATTATCCAAAACT+TGG | - | chr3_1:82704119-82704138 | None:intergenic | 25.0% |
| !!! | AGTTTTGGATAATAACTTGT+TGG | + | chr3_1:82704119-82704138 | Msa0380740:intron | 25.0% |
| !!! | GTTTTGGATAATAACTTGTT+GGG | + | chr3_1:82704120-82704139 | Msa0380740:intron | 25.0% |
| ! | AATGCCATCAAAAGTTTAAT+AGG | - | chr3_1:82704188-82704207 | None:intergenic | 25.0% |
| !! | TTGATGGCATTTGTATATAA+TGG | + | chr3_1:82704197-82704216 | Msa0380740:intron | 25.0% |
| !! | ACCTCCTATTAAACTTTTTA+TGG | + | chr3_1:82704238-82704257 | Msa0380740:intron | 25.0% |
| ! | TTTATGGCATTTGTGTATAA+TGG | + | chr3_1:82704254-82704273 | Msa0380740:intron | 25.0% |
| ! | ATCTACCATACAAAATGATA+AGG | + | chr3_1:82704355-82704374 | Msa0380740:intron | 25.0% |
| ! | ACAAAATGATAAGGATATAG+AGG | + | chr3_1:82704364-82704383 | Msa0380740:intron | 25.0% |
| ! | CAAAATGATAAGGATATAGA+GGG | + | chr3_1:82704365-82704384 | Msa0380740:intron | 25.0% |
| ! | TAACAATTGTACTGTTGTAT+GGG | + | chr3_1:82704501-82704520 | Msa0380740:intron | 25.0% |
| ! | ATAGATAAGGATGTTATGAT+GGG | + | chr3_1:82704574-82704593 | Msa0380740:intron | 25.0% |
| ! | CTTAGGAATGTAATCATTAT+AGG | + | chr3_1:82704627-82704646 | Msa0380740:intron | 25.0% |
| ! | TAATCATTATAGGGAAAGTT+TGG | + | chr3_1:82704637-82704656 | Msa0380740:intron | 25.0% |
| ! | AATCATTATAGGGAAAGTTT+GGG | + | chr3_1:82704638-82704657 | Msa0380740:intron | 25.0% |
| !!! | TAAACCAATCTAAGACATTT+TGG | + | chr3_1:82704922-82704941 | Msa0380740:intron | 25.0% |
| !!! | AAACCAATCTAAGACATTTT+GGG | + | chr3_1:82704923-82704942 | Msa0380740:intron | 25.0% |
| ! | TTAATATCAGGAAAAACTTG+CGG | + | chr3_1:82705245-82705264 | Msa0380740:intron | 25.0% |
| !! | TTTGAGTTTATTACTCATCT+CGG | + | chr3_1:82705333-82705352 | Msa0380740:CDS | 25.0% |
| ! | TTCAACACAAAGCTTAAATA+TGG | - | chr3_1:82705635-82705654 | None:intergenic | 25.0% |
| ! | TCCTTTCATAATTTCTTCAA+CGG | - | chr3_1:82706131-82706150 | None:intergenic | 25.0% |
| !! | ACAAGATGGTTATTTCATTA+AGG | + | chr3_1:82706310-82706329 | Msa0380740:intron | 25.0% |
| !!! | TTCTGTAAAGCTTTATTATC+CGG | + | chr3_1:82706581-82706600 | Msa0380740:intron | 25.0% |
| ! | AATGTTAAATTAGTCATTGG+TGG | + | chr3_1:82706797-82706816 | Msa0380740:intron | 25.0% |
| ! | TTCTGTAACTATCTATTTCA+TGG | + | chr3_1:82706843-82706862 | Msa0380740:intron | 25.0% |
| ! | TAATTAGTTGTTCAAGGAAA+AGG | + | chr3_1:82707139-82707158 | Msa0380740:three_prime_UTR | 25.0% |
| !!! | TTTTTTTGGAGTAAAGTAGG+AGG | + | chr3_1:82702749-82702768 | Msa0380740:five_prime_UTR | 30.0% |
| AAAGGAAAGAAAAACGAGAA+AGG | - | chr3_1:82703044-82703063 | None:intergenic | 30.0% | |
| !!! | GTTTTGTTTTCGTAACTCTA+AGG | + | chr3_1:82703218-82703237 | Msa0380740:intron | 30.0% |
| !! | AACTCTAAGGGATTCAATTT+TGG | + | chr3_1:82703231-82703250 | Msa0380740:intron | 30.0% |
| !!! | GATTCAATTTTGGTTGTTTC+AGG | + | chr3_1:82703241-82703260 | Msa0380740:intron | 30.0% |
| AACATACTGAGGAAAATATG+CGG | + | chr3_1:82703397-82703416 | Msa0380740:CDS | 30.0% | |
| TTTCAATGCTTTAACTACTC+AGG | + | chr3_1:82703512-82703531 | Msa0380740:intron | 30.0% | |
| CATGCTATAAAAAACAAGGA+AGG | - | chr3_1:82703559-82703578 | None:intergenic | 30.0% | |
| !! | TTAGTATTATTTTCAGGGGA+AGG | + | chr3_1:82704079-82704098 | Msa0380740:intron | 30.0% |
| !! | TAGTATTATTTTCAGGGGAA+GGG | + | chr3_1:82704080-82704099 | Msa0380740:intron | 30.0% |
| ! | ACCTCCTATTAAACTTTTGA+TGG | + | chr3_1:82704181-82704200 | Msa0380740:intron | 30.0% |
| GCCATAAAAAGTTTAATAGG+AGG | - | chr3_1:82704242-82704261 | None:intergenic | 30.0% | |
| GACGAAATCAACGAATAATT+TGG | + | chr3_1:82704418-82704437 | Msa0380740:intron | 30.0% | |
| GTAACAATTGTACTGTTGTA+TGG | + | chr3_1:82704500-82704519 | Msa0380740:intron | 30.0% | |
| AACTCACTGTTTCATAGATA+AGG | + | chr3_1:82704561-82704580 | Msa0380740:intron | 30.0% | |
| CATAGATAAGGATGTTATGA+TGG | + | chr3_1:82704573-82704592 | Msa0380740:intron | 30.0% | |
| ! | AAGATAATAGGTATTGTCCT+AGG | + | chr3_1:82704678-82704697 | Msa0380740:intron | 30.0% |
| TAGTTATGTGGTAAAGTAAG+AGG | + | chr3_1:82704866-82704885 | Msa0380740:intron | 30.0% | |
| TTTCCCAAAATGTCTTAGAT+TGG | - | chr3_1:82704929-82704948 | None:intergenic | 30.0% | |
| AAAACGAAAGAATGATTCTC+TGG | + | chr3_1:82704974-82704993 | Msa0380740:CDS | 30.0% | |
| AAAGAATGATTCTCTGGTTA+AGG | + | chr3_1:82704980-82704999 | Msa0380740:CDS | 30.0% | |
| AATTGCTTCTTTAGTGTTAG+TGG | - | chr3_1:82705303-82705322 | None:intergenic | 30.0% | |
| AATTGGCTGTAAAGAAAATG+AGG | - | chr3_1:82705421-82705440 | None:intergenic | 30.0% | |
| !! | CAATTTGATATAGCTTTGGA+CGG | + | chr3_1:82705436-82705455 | Msa0380740:intron | 30.0% |
| TTGAATATGTCGTTCACATT+AGG | - | chr3_1:82705553-82705572 | None:intergenic | 30.0% | |
| GATTACAGATTGAAGAAAAG+TGG | + | chr3_1:82705583-82705602 | Msa0380740:CDS | 30.0% | |
| ACACAAAGCTTAAATATGGA+GGG | - | chr3_1:82705631-82705650 | None:intergenic | 30.0% | |
| AACACAAAGCTTAAATATGG+AGG | - | chr3_1:82705632-82705651 | None:intergenic | 30.0% | |
| ! | TTTGAAAACAGTTTTCTGCT+TGG | - | chr3_1:82705776-82705795 | None:intergenic | 30.0% |
| ATTGGAACTTTCTATCAACT+GGG | - | chr3_1:82705923-82705942 | None:intergenic | 30.0% | |
| TATTGGAACTTTCTATCAAC+TGG | - | chr3_1:82705924-82705943 | None:intergenic | 30.0% | |
| TGAACACAAAAACAGATTTC+AGG | - | chr3_1:82705960-82705979 | None:intergenic | 30.0% | |
| TCAATATAAGCAGAAAAACC+AGG | - | chr3_1:82705992-82706011 | None:intergenic | 30.0% | |
| CATCACAAGTGGAAATATAA+AGG | - | chr3_1:82706062-82706081 | None:intergenic | 30.0% | |
| GTAATAATAAGCATCACAAG+TGG | - | chr3_1:82706073-82706092 | None:intergenic | 30.0% | |
| TCCGTTGAAGAAATTATGAA+AGG | + | chr3_1:82706127-82706146 | Msa0380740:CDS | 30.0% | |
| ATGAAATAACCATCTTGTCT+GGG | - | chr3_1:82706308-82706327 | None:intergenic | 30.0% | |
| AATGAAATAACCATCTTGTC+TGG | - | chr3_1:82706309-82706328 | None:intergenic | 30.0% | |
| AAACACAAGTATTAGAAGTC+CGG | - | chr3_1:82706603-82706622 | None:intergenic | 30.0% | |
| ATAATATCACATAGCTTCTG+CGG | + | chr3_1:82706966-82706985 | Msa0380740:exon | 30.0% | |
| !! | TCAAGTGTTACTTGTAGTAT+TGG | + | chr3_1:82707049-82707068 | Msa0380740:three_prime_UTR | 30.0% |
| ! | TTGGAAATGTAAACCTTTTC+AGG | + | chr3_1:82707068-82707087 | Msa0380740:three_prime_UTR | 30.0% |
| !! | TGTAAACCTTTTCAGGATTA+AGG | + | chr3_1:82707075-82707094 | Msa0380740:three_prime_UTR | 30.0% |
| !! | GTAAACCTTTTCAGGATTAA+GGG | + | chr3_1:82707076-82707095 | Msa0380740:three_prime_UTR | 30.0% |
| AAGGGAGAGAAACTATTTAA+AGG | + | chr3_1:82707094-82707113 | Msa0380740:three_prime_UTR | 30.0% | |
| !!! | TGTTGCTGGGTTTTGTTAAT+TGG | + | chr3_1:82702779-82702798 | Msa0380740:five_prime_UTR | 35.0% |
| CTTCATAAAGACAAGAAGTG+TGG | - | chr3_1:82703008-82703027 | None:intergenic | 35.0% | |
| TTCTTGTCTTTATGAAGCCA+AGG | + | chr3_1:82703011-82703030 | Msa0380740:CDS | 35.0% | |
| AGTTACGAAAACAAAACGAG+AGG | - | chr3_1:82703215-82703234 | None:intergenic | 35.0% | |
| !!! | AATTTTGGTTGTTTCAGGGT+TGG | + | chr3_1:82703246-82703265 | Msa0380740:intron | 35.0% |
| TTGATTGTGTTGAGAACTGT+GGG | + | chr3_1:82703303-82703322 | Msa0380740:intron | 35.0% | |
| !!! | ACTGTGGGTTTTGATTTGTT+AGG | + | chr3_1:82703318-82703337 | Msa0380740:intron | 35.0% |
| !!! | CTGTGGGTTTTGATTTGTTA+GGG | + | chr3_1:82703319-82703338 | Msa0380740:intron | 35.0% |
| ! | TTTGTGTGTTTTACTGCAGT+TGG | + | chr3_1:82703343-82703362 | Msa0380740:intron | 35.0% |
| ! | TTGTGTGTTTTACTGCAGTT+GGG | + | chr3_1:82703344-82703363 | Msa0380740:intron | 35.0% |
| TCGATTGATGAAACATACTG+AGG | + | chr3_1:82703386-82703405 | Msa0380740:CDS | 35.0% | |
| CTTGCACTTGATGAGAAATA+TGG | + | chr3_1:82703426-82703445 | Msa0380740:CDS | 35.0% | |
| ! | CGAATGTTTTGTAGAGCTTA+TGG | + | chr3_1:82703638-82703657 | Msa0380740:intron | 35.0% |
| TTTCGTAAGCTCTCCAAAAT+AGG | + | chr3_1:82703701-82703720 | Msa0380740:intron | 35.0% | |
| ACATGATTGGGCGAATTAAT+TGG | + | chr3_1:82704037-82704056 | Msa0380740:intron | 35.0% | |
| ! | TATCCATCTTCTCCAAGTTT+TGG | + | chr3_1:82704104-82704123 | Msa0380740:intron | 35.0% |
| TATCCAAAACTTGGAGAAGA+TGG | - | chr3_1:82704110-82704129 | None:intergenic | 35.0% | |
| GCCATCAAAAGTTTAATAGG+AGG | - | chr3_1:82704185-82704204 | None:intergenic | 35.0% | |
| AATAGGAGGTCAAACACATA+AGG | - | chr3_1:82704228-82704247 | None:intergenic | 35.0% | |
| TCCAAAAGAGTTTGAACACT+GGG | + | chr3_1:82704281-82704300 | Msa0380740:intron | 35.0% | |
| ATCTAGTCAAAGCTTCACAT+AGG | - | chr3_1:82704740-82704759 | None:intergenic | 35.0% | |
| ! | TATGTGAAGCTTTGACTAGA+TGG | + | chr3_1:82704739-82704758 | Msa0380740:intron | 35.0% |
| ! | TAGTCCATATCTAGAGTTAG+AGG | + | chr3_1:82704766-82704785 | Msa0380740:intron | 35.0% |
| ! | AGTCCATATCTAGAGTTAGA+GGG | + | chr3_1:82704767-82704786 | Msa0380740:intron | 35.0% |
| GGTAAAGTAAGAGGACTTTA+TGG | + | chr3_1:82704875-82704894 | Msa0380740:intron | 35.0% | |
| AAATGTAATGCAGTTGCAAG+AGG | + | chr3_1:82704948-82704967 | Msa0380740:intron | 35.0% | |
| TGAATGTTGACAAGTTTGTC+CGG | - | chr3_1:82705276-82705295 | None:intergenic | 35.0% | |
| CAGCCAATTTGATATAGCTT+TGG | + | chr3_1:82705432-82705451 | Msa0380740:intron | 35.0% | |
| CGTCCAAAGCTATATCAAAT+TGG | - | chr3_1:82705438-82705457 | None:intergenic | 35.0% | |
| ! | TTGAAATACTCCAGTCTTGT+GGG | + | chr3_1:82705650-82705669 | Msa0380740:intron | 35.0% |
| TTGGAACTTTCTATCAACTG+GGG | - | chr3_1:82705922-82705941 | None:intergenic | 35.0% | |
| TAAGCAGAAAAACCAGGTAA+AGG | - | chr3_1:82705986-82706005 | None:intergenic | 35.0% | |
| TATCAAAAACACAGCTGAAG+GGG | - | chr3_1:82706036-82706055 | None:intergenic | 35.0% | |
| GTATCAAAAACACAGCTGAA+GGG | - | chr3_1:82706037-82706056 | None:intergenic | 35.0% | |
| TGTATCAAAAACACAGCTGA+AGG | - | chr3_1:82706038-82706057 | None:intergenic | 35.0% | |
| !! | TTATTGTACAAGAGCATCAC+TGG | - | chr3_1:82706181-82706200 | None:intergenic | 35.0% |
| ATCGTTCCTTCTGCTATATA+TGG | + | chr3_1:82706238-82706257 | Msa0380740:CDS | 35.0% | |
| !!! | TATGCATGTGTTGTTTTGCA+AGG | + | chr3_1:82706335-82706354 | Msa0380740:intron | 35.0% |
| !!! | ATGCATGTGTTGTTTTGCAA+GGG | + | chr3_1:82706336-82706355 | Msa0380740:intron | 35.0% |
| ! | CATAAGTGTCTTAGCTCTTA+AGG | + | chr3_1:82706367-82706386 | Msa0380740:CDS | 35.0% |
| TGCAAGTGCAACAATTAAGT+CGG | - | chr3_1:82706420-82706439 | None:intergenic | 35.0% | |
| ACATCCGTATTTCCATAACA+GGG | - | chr3_1:82706443-82706462 | None:intergenic | 35.0% | |
| AACATCCGTATTTCCATAAC+AGG | - | chr3_1:82706444-82706463 | None:intergenic | 35.0% | |
| TGTTATGGAAATACGGATGT+TGG | + | chr3_1:82706443-82706462 | Msa0380740:CDS | 35.0% | |
| !! | AGAGTTGTTTTGCAAAATGC+TGG | + | chr3_1:82706467-82706486 | Msa0380740:CDS | 35.0% |
| TTAGCATGGAACAATAACTC+TGG | - | chr3_1:82706668-82706687 | None:intergenic | 35.0% | |
| TTGTTCCATGCTAACATTGA+AGG | + | chr3_1:82706674-82706693 | Msa0380740:CDS | 35.0% | |
| CACAAATACTTGACTTTCTC+AGG | + | chr3_1:82706720-82706739 | Msa0380740:CDS | 35.0% | |
| AACTATCTATTTCATGGTGC+AGG | + | chr3_1:82706849-82706868 | Msa0380740:intron | 35.0% | |
| CTTGGACATGATAAGAAGAA+AGG | - | chr3_1:82706904-82706923 | None:intergenic | 35.0% | |
| ! | AGAATGCTTGTTACAAATGC+AGG | + | chr3_1:82706993-82707012 | Msa0380740:three_prime_UTR | 35.0% |
| ! | GAATGCTTGTTACAAATGCA+GGG | + | chr3_1:82706994-82707013 | Msa0380740:three_prime_UTR | 35.0% |
| AACCAAAACACAGTAGCACT+AGG | + | chr3_1:82702840-82702859 | Msa0380740:five_prime_UTR | 40.0% | |
| GTTGATTGTGTTGAGAACTG+TGG | + | chr3_1:82703302-82703321 | Msa0380740:intron | 40.0% | |
| TTTACTGCAGTTGGGATGAA+TGG | + | chr3_1:82703352-82703371 | Msa0380740:intron | 40.0% | |
| TTACTGCAGTTGGGATGAAT+GGG | + | chr3_1:82703353-82703372 | Msa0380740:intron | 40.0% | |
| TATCTGACCATTCGAACTCT+TGG | - | chr3_1:82703487-82703506 | None:intergenic | 40.0% | |
| CCTGTTTGGATAAACAGCTA+AGG | - | chr3_1:82703875-82703894 | None:intergenic | 40.0% | |
| CCTTAGCTGTTTATCCAAAC+AGG | + | chr3_1:82703872-82703891 | Msa0380740:intron | 40.0% | |
| CTTCCATGTTCAACTTGTAG+AGG | + | chr3_1:82703919-82703938 | Msa0380740:intron | 40.0% | |
| GCAAGACATTCACATTGTTC+AGG | + | chr3_1:82703987-82704006 | Msa0380740:intron | 40.0% | |
| CATTCACATTGTTCAGGAAC+TGG | + | chr3_1:82703993-82704012 | Msa0380740:intron | 40.0% | |
| TGGGCGAATTAATTGGTACT+TGG | + | chr3_1:82704044-82704063 | Msa0380740:intron | 40.0% | |
| GTCCAAAAGAGTTTGAACAC+TGG | + | chr3_1:82704280-82704299 | Msa0380740:intron | 40.0% | |
| CCAAAAGAGTTTGAACACTG+GGG | + | chr3_1:82704282-82704301 | Msa0380740:intron | 40.0% | |
| TTGATTTCGTCCACTCTAGT+TGG | - | chr3_1:82704409-82704428 | None:intergenic | 40.0% | |
| ! | GATAAGGATGTTATGATGGG+TGG | + | chr3_1:82704577-82704596 | Msa0380740:intron | 40.0% |
| ACACAAGTCAAGATAGGCTT+AGG | + | chr3_1:82704610-82704629 | Msa0380740:intron | 40.0% | |
| ! | GTCCATATCTAGAGTTAGAG+GGG | + | chr3_1:82704768-82704787 | Msa0380740:intron | 40.0% |
| ! | TCCATATCTAGAGTTAGAGG+GGG | + | chr3_1:82704769-82704788 | Msa0380740:intron | 40.0% |
| GTGAGTTTAGATCAGAAGTG+TGG | - | chr3_1:82704820-82704839 | None:intergenic | 40.0% | |
| CATGAACTTCAAAGACGCAT+GGG | - | chr3_1:82705062-82705081 | None:intergenic | 40.0% | |
| ACATGAACTTCAAAGACGCA+TGG | - | chr3_1:82705063-82705082 | None:intergenic | 40.0% | |
| ! | CATGTTTTGTCCCTTGTATG+AGG | + | chr3_1:82705156-82705175 | Msa0380740:intron | 40.0% |
| GTTTATTACTCATCTCGGCA+AGG | + | chr3_1:82705338-82705357 | Msa0380740:CDS | 40.0% | |
| GTTGAAATACTCCAGTCTTG+TGG | + | chr3_1:82705649-82705668 | Msa0380740:intron | 40.0% | |
| ACACTTATTTCCCACAAGAC+TGG | - | chr3_1:82705663-82705682 | None:intergenic | 40.0% | |
| CAAAAACAGATTTCAGGCAC+AGG | - | chr3_1:82705954-82705973 | None:intergenic | 40.0% | |
| TTGTGTTCATGTCCTTTACC+TGG | + | chr3_1:82705971-82705990 | Msa0380740:intron | 40.0% | |
| TATCGTTTGGACAAGCTTCT+TGG | - | chr3_1:82706219-82706238 | None:intergenic | 40.0% | |
| TCAGCACCATATATAGCAGA+AGG | - | chr3_1:82706247-82706266 | None:intergenic | 40.0% | |
| ! | GAGCATTTGTTACGTCTCTT+TGG | + | chr3_1:82706265-82706284 | Msa0380740:CDS | 40.0% |
| ATAACCATCTTGTCTGGGAA+GGG | - | chr3_1:82706303-82706322 | None:intergenic | 40.0% | |
| AATAACCATCTTGTCTGGGA+AGG | - | chr3_1:82706304-82706323 | None:intergenic | 40.0% | |
| TGCACCCTGTTATGGAAATA+CGG | + | chr3_1:82706436-82706455 | Msa0380740:CDS | 40.0% | |
| TTTGCAAAATGCTGGCCATT+TGG | + | chr3_1:82706475-82706494 | Msa0380740:CDS | 40.0% | |
| TAGCAATAAACCCATGTGTG+AGG | - | chr3_1:82706507-82706526 | None:intergenic | 40.0% | |
| GAAAGTCAAGTATTTGTGCC+TGG | - | chr3_1:82706718-82706737 | None:intergenic | 40.0% | |
| TGCTGTTCTCAACATCTTCT+TGG | - | chr3_1:82706922-82706941 | None:intergenic | 40.0% | |
| TCTCTCCCTTAATCCTGAAA+AGG | - | chr3_1:82707084-82707103 | None:intergenic | 40.0% | |
| !! | TAGGAGGTGTTCTTTGTTGC+TGG | + | chr3_1:82702765-82702784 | Msa0380740:five_prime_UTR | 45.0% |
| !! | AGGAGGTGTTCTTTGTTGCT+GGG | + | chr3_1:82702766-82702785 | Msa0380740:five_prime_UTR | 45.0% |
| !! | CACCTAGTGCTACTGTGTTT+TGG | - | chr3_1:82702845-82702864 | None:intergenic | 45.0% |
| TCCTTCGTCGTAAGGAGAAA+CGG | - | chr3_1:82702968-82702987 | None:intergenic | 45.0% | |
| ACTTTCTCTCCTTCGTCGTA+AGG | - | chr3_1:82702976-82702995 | None:intergenic | 45.0% | |
| ACGAGAAAGGAAGAAGACCT+TGG | - | chr3_1:82703031-82703050 | None:intergenic | 45.0% | |
| ! | ACGCCTCTACAAGTTGAACA+TGG | - | chr3_1:82703925-82703944 | None:intergenic | 45.0% |
| ! | CCCCAGTGTTCAAACTCTTT+TGG | - | chr3_1:82704285-82704304 | None:intergenic | 45.0% |
| TCCATAGAGTCCAACTAGAG+TGG | + | chr3_1:82704396-82704415 | Msa0380740:intron | 45.0% | |
| TCCACTCTAGTTGGACTCTA+TGG | - | chr3_1:82704400-82704419 | None:intergenic | 45.0% | |
| TGTTGTATGGGAGTCAGTGT+TGG | + | chr3_1:82704513-82704532 | Msa0380740:intron | 45.0% | |
| GTTGTATGGGAGTCAGTGTT+GGG | + | chr3_1:82704514-82704533 | Msa0380740:intron | 45.0% | |
| !! | AAGGATGTTATGATGGGTGG+TGG | + | chr3_1:82704580-82704599 | Msa0380740:intron | 45.0% |
| GGTGGTACACAAGTCAAGAT+AGG | + | chr3_1:82704604-82704623 | Msa0380740:intron | 45.0% | |
| ! | GTGAAGCTTTGACTAGATGG+AGG | + | chr3_1:82704742-82704761 | Msa0380740:intron | 45.0% |
| ! | TCAGAAGTGTGGTATGTGCT+AGG | - | chr3_1:82704809-82704828 | None:intergenic | 45.0% |
| TTTGTCCCTTGTATGAGGTG+AGG | + | chr3_1:82705161-82705180 | Msa0380740:intron | 45.0% | |
| TTGTCCCTTGTATGAGGTGA+GGG | + | chr3_1:82705162-82705181 | Msa0380740:intron | 45.0% | |
| CATTCCCTCACCTCATACAA+GGG | - | chr3_1:82705169-82705188 | None:intergenic | 45.0% | |
| GGAAAAACTTGCGGTTCTTC+CGG | + | chr3_1:82705254-82705273 | Msa0380740:intron | 45.0% | |
| ATCTCGGCAAGGTAGCAATA+TGG | + | chr3_1:82705349-82705368 | Msa0380740:intron | 45.0% | |
| ! | TCGTTCACATTAGGAGTACG+AGG | - | chr3_1:82705544-82705563 | None:intergenic | 45.0% |
| TGGATCGTAAGTTCATGCTG+AGG | + | chr3_1:82705603-82705622 | Msa0380740:intron | 45.0% | |
| CAGGCACAGGCTAATCATAT+TGG | - | chr3_1:82705941-82705960 | None:intergenic | 45.0% | |
| GCAGAAGGAACGATATCGTT+TGG | - | chr3_1:82706232-82706251 | None:intergenic | 45.0% | |
| ! | TGTGTGAGGCTGATTCCAAA+TGG | - | chr3_1:82706493-82706512 | None:intergenic | 45.0% |
| ! | TTTGGAATCAGCCTCACACA+TGG | + | chr3_1:82706493-82706512 | Msa0380740:CDS | 45.0% |
| TTGGAATCAGCCTCACACAT+GGG | + | chr3_1:82706494-82706513 | Msa0380740:CDS | 45.0% | |
| TGTCGCCTTCAATGTTAGCA+TGG | - | chr3_1:82706682-82706701 | None:intergenic | 45.0% | |
| CGACACATTGATAGAACTCC+AGG | + | chr3_1:82706697-82706716 | Msa0380740:CDS | 45.0% | |
| !! | AAATAATTCAATAAATTATA+TGG | - | chr3_1:82703899-82703918 | None:intergenic | 5.0% |
| !!! | AATTATTATATATATCATTT+TGG | + | chr3_1:82705689-82705708 | Msa0380740:intron | 5.0% |
| TCCGTTTCTCCTTACGACGA+AGG | + | chr3_1:82702964-82702983 | Msa0380740:CDS | 50.0% | |
| TGCAGTTGGGATGAATGGGT+TGG | + | chr3_1:82703357-82703376 | Msa0380740:intron | 50.0% | |
| AAGAATGCCAGAAAGCCTCG+TGG | + | chr3_1:82703456-82703475 | Msa0380740:CDS | 50.0% | |
| GGATCGTCCAAGAGTTCGAA+TGG | + | chr3_1:82703477-82703496 | Msa0380740:CDS | 50.0% | |
| !! | GATGTTATGATGGGTGGTGG+TGG | + | chr3_1:82704583-82704602 | Msa0380740:intron | 50.0% |
| ! | GTTGCATGCTCGAAGTACCT+AGG | - | chr3_1:82704698-82704717 | None:intergenic | 50.0% |
| GAGCATGCAACGAGAAAGCT+TGG | + | chr3_1:82704707-82704726 | Msa0380740:intron | 50.0% | |
| GCCCCCTCTAACTCTAGATA+TGG | - | chr3_1:82704773-82704792 | None:intergenic | 50.0% | |
| CCATTCCCTCACCTCATACA+AGG | - | chr3_1:82705170-82705189 | None:intergenic | 50.0% | |
| CCTTGTATGAGGTGAGGGAA+TGG | + | chr3_1:82705167-82705186 | Msa0380740:intron | 50.0% | |
| TTAGCCCTTCCCAGACAAGA+TGG | + | chr3_1:82706296-82706315 | Msa0380740:intron | 50.0% | |
| GTTGCACTTGCACCCTGTTA+TGG | + | chr3_1:82706428-82706447 | Msa0380740:CDS | 50.0% | |
| GAACTCTTGGACGATCCACG+AGG | - | chr3_1:82703474-82703493 | None:intergenic | 55.0% | |
| !! | GTTATGATGGGTGGTGGTGG+TGG | + | chr3_1:82704586-82704605 | Msa0380740:intron | 55.0% |
| GGACGATCCACGAGGCTTTC+TGG | - | chr3_1:82703466-82703485 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 82702742 | 82707180 | 82702742 | ID=Msa0380740;Name=Msa0380740 |
| chr3_1 | mRNA | 82702742 | 82707180 | 82702742 | ID=Msa0380740-mRNA-1;Parent=Msa0380740;Name=Msa0380740-mRNA-1;_AED=0.33;_eAED=0.33;_QI=138|0.55|0.8|0.9|1|1|10|201|350 |
| chr3_1 | exon | 82702742 | 82703032 | 82702742 | ID=Msa0380740-mRNA-1:exon:21112;Parent=Msa0380740-mRNA-1 |
| chr3_1 | exon | 82703263 | 82703276 | 82703263 | ID=Msa0380740-mRNA-1:exon:21113;Parent=Msa0380740-mRNA-1 |
| chr3_1 | exon | 82703362 | 82703498 | 82703362 | ID=Msa0380740-mRNA-1:exon:21114;Parent=Msa0380740-mRNA-1 |
| chr3_1 | exon | 82704961 | 82705001 | 82704961 | ID=Msa0380740-mRNA-1:exon:21115;Parent=Msa0380740-mRNA-1 |
| chr3_1 | exon | 82705255 | 82705359 | 82705255 | ID=Msa0380740-mRNA-1:exon:21116;Parent=Msa0380740-mRNA-1 |
| chr3_1 | exon | 82705529 | 82705608 | 82705529 | ID=Msa0380740-mRNA-1:exon:21117;Parent=Msa0380740-mRNA-1 |
| chr3_1 | exon | 82706117 | 82706286 | 82706117 | ID=Msa0380740-mRNA-1:exon:21118;Parent=Msa0380740-mRNA-1 |
| chr3_1 | exon | 82706357 | 82706515 | 82706357 | ID=Msa0380740-mRNA-1:exon:21119;Parent=Msa0380740-mRNA-1 |
| chr3_1 | exon | 82706657 | 82706741 | 82706657 | ID=Msa0380740-mRNA-1:exon:21120;Parent=Msa0380740-mRNA-1 |
| chr3_1 | exon | 82706871 | 82707180 | 82706871 | ID=Msa0380740-mRNA-1:exon:21121;Parent=Msa0380740-mRNA-1 |
| chr3_1 | five_prime_UTR | 82702742 | 82702879 | 82702742 | ID=Msa0380740-mRNA-1:five_prime_utr;Parent=Msa0380740-mRNA-1 |
| chr3_1 | CDS | 82702880 | 82703032 | 82702880 | ID=Msa0380740-mRNA-1:cds;Parent=Msa0380740-mRNA-1 |
| chr3_1 | CDS | 82703263 | 82703276 | 82703263 | ID=Msa0380740-mRNA-1:cds;Parent=Msa0380740-mRNA-1 |
| chr3_1 | CDS | 82703362 | 82703498 | 82703362 | ID=Msa0380740-mRNA-1:cds;Parent=Msa0380740-mRNA-1 |
| chr3_1 | CDS | 82704961 | 82705001 | 82704961 | ID=Msa0380740-mRNA-1:cds;Parent=Msa0380740-mRNA-1 |
| chr3_1 | CDS | 82705255 | 82705359 | 82705255 | ID=Msa0380740-mRNA-1:cds;Parent=Msa0380740-mRNA-1 |
| chr3_1 | CDS | 82705529 | 82705608 | 82705529 | ID=Msa0380740-mRNA-1:cds;Parent=Msa0380740-mRNA-1 |
| chr3_1 | CDS | 82706117 | 82706286 | 82706117 | ID=Msa0380740-mRNA-1:cds;Parent=Msa0380740-mRNA-1 |
| chr3_1 | CDS | 82706357 | 82706515 | 82706357 | ID=Msa0380740-mRNA-1:cds;Parent=Msa0380740-mRNA-1 |
| chr3_1 | CDS | 82706657 | 82706741 | 82706657 | ID=Msa0380740-mRNA-1:cds;Parent=Msa0380740-mRNA-1 |
| chr3_1 | CDS | 82706871 | 82706979 | 82706871 | ID=Msa0380740-mRNA-1:cds;Parent=Msa0380740-mRNA-1 |
| chr3_1 | three_prime_UTR | 82706980 | 82707180 | 82706980 | ID=Msa0380740-mRNA-1:three_prime_utr;Parent=Msa0380740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
