Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1294610 | XP_003629259.1 | 92.453 | 371 | 22 | 3 | 1 | 368 | 1 | 368 | 0.0 | 607 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1294610 | sp|Q94K80|LRP1C_ARATH | 33.333 | 357 | 173 | 17 | 37 | 368 | 86 | 402 | 1.79e-28 | 119 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1294610 | G7LB62 | 92.453 | 371 | 22 | 3 | 1 | 368 | 1 | 368 | 0.0 | 607 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013050 | Msa1294610 | 0.891208 | 4.898568e-74 | -8.615850e-47 |
| Msa0023830 | Msa1294610 | 0.811969 | 5.364916e-51 | -8.615850e-47 |
| Msa0024210 | Msa1294610 | 0.820336 | 7.238841e-53 | -8.615850e-47 |
| Msa0025730 | Msa1294610 | -0.800239 | 1.581814e-48 | -8.615850e-47 |
| Msa0028660 | Msa1294610 | -0.827387 | 1.608741e-54 | -8.615850e-47 |
| Msa0032580 | Msa1294610 | -0.814469 | 1.516434e-51 | -8.615850e-47 |
| Msa0032610 | Msa1294610 | -0.807353 | 5.268420e-50 | -8.615850e-47 |
| Msa0036220 | Msa1294610 | 0.813811 | 2.119105e-51 | -8.615850e-47 |
| Msa0037540 | Msa1294610 | 0.823342 | 1.458322e-53 | -8.615850e-47 |
| Msa0037570 | Msa1294610 | 0.814103 | 1.826942e-51 | -8.615850e-47 |
| Msa0037590 | Msa1294610 | 0.818773 | 1.645524e-52 | -8.615850e-47 |
| Msa0039330 | Msa1294610 | -0.810092 | 1.369069e-50 | -8.615850e-47 |
| Msa0049650 | Msa1294610 | 0.811520 | 6.720408e-51 | -8.615850e-47 |
| Msa0054730 | Msa1294610 | 0.839594 | 1.443059e-57 | -8.615850e-47 |
| Msa0074950 | Msa1294610 | 0.852564 | 4.249376e-61 | -8.615850e-47 |
| Msa0076320 | Msa1294610 | -0.825460 | 4.632353e-54 | -8.615850e-47 |
| Msa0084940 | Msa1294610 | -0.815560 | 8.682578e-52 | -8.615850e-47 |
| Msa0085360 | Msa1294610 | 0.817459 | 3.261278e-52 | -8.615850e-47 |
| Msa0091250 | Msa1294610 | 0.823658 | 1.230042e-53 | -8.615850e-47 |
| Msa0092990 | Msa1294610 | -0.821554 | 3.796328e-53 | -8.615850e-47 |
| Msa0106370 | Msa1294610 | 0.816107 | 6.558586e-52 | -8.615850e-47 |
| Msa0115270 | Msa1294610 | -0.812699 | 3.717717e-51 | -8.615850e-47 |
| Msa0119850 | Msa1294610 | -0.816377 | 5.707826e-52 | -8.615850e-47 |
| Msa0605170 | Msa1294610 | -0.815424 | 9.310773e-52 | -8.615850e-47 |
| Msa0607340 | Msa1294610 | 0.867849 | 1.010406e-65 | -8.615850e-47 |
| Msa0610430 | Msa1294610 | -0.816649 | 4.960057e-52 | -8.615850e-47 |
| Msa0617640 | Msa1294610 | -0.802106 | 6.565888e-49 | -8.615850e-47 |
| Msa0621490 | Msa1294610 | -0.813842 | 2.085525e-51 | -8.615850e-47 |
| Msa0623790 | Msa1294610 | -0.802795 | 4.736089e-49 | -8.615850e-47 |
| Msa0632870 | Msa1294610 | -0.800457 | 1.428443e-48 | -8.615850e-47 |
| Msa0638320 | Msa1294610 | -0.808906 | 2.460330e-50 | -8.615850e-47 |
| Msa0643560 | Msa1294610 | -0.815448 | 9.196163e-52 | -8.615850e-47 |
| Msa0647450 | Msa1294610 | 0.861174 | 1.234890e-63 | -8.615850e-47 |
| Msa0661190 | Msa1294610 | 0.900330 | 8.158225e-78 | -8.615850e-47 |
| Msa0662650 | Msa1294610 | -0.817015 | 4.105756e-52 | -8.615850e-47 |
| Msa0669850 | Msa1294610 | -0.804808 | 1.807964e-49 | -8.615850e-47 |
| Msa0682840 | Msa1294610 | -0.812782 | 3.565640e-51 | -8.615850e-47 |
| Msa0684180 | Msa1294610 | 0.812622 | 3.863998e-51 | -8.615850e-47 |
| Msa0708860 | Msa1294610 | -0.813648 | 2.301058e-51 | -8.615850e-47 |
| Msa0716840 | Msa1294610 | -0.804941 | 1.696606e-49 | -8.615850e-47 |
| Msa0744170 | Msa1294610 | 0.806471 | 8.096690e-50 | -8.615850e-47 |
| Msa0755230 | Msa1294610 | 0.800711 | 1.267802e-48 | -8.615850e-47 |
| Msa0784860 | Msa1294610 | -0.803186 | 3.931801e-49 | -8.615850e-47 |
| Msa0795920 | Msa1294610 | -0.805082 | 1.584576e-49 | -8.615850e-47 |
| Msa0808270 | Msa1294610 | -0.812316 | 4.506943e-51 | -8.615850e-47 |
| Msa0813720 | Msa1294610 | -0.804135 | 2.497525e-49 | -8.615850e-47 |
| Msa0825240 | Msa1294610 | 0.814483 | 1.505522e-51 | -8.615850e-47 |
| Msa0124570 | Msa1294610 | 0.801358 | 9.348183e-49 | -8.615850e-47 |
| Msa0129190 | Msa1294610 | 0.837594 | 4.739810e-57 | -8.615850e-47 |
| Msa0134110 | Msa1294610 | 0.828998 | 6.580022e-55 | -8.615850e-47 |
| Msa0135380 | Msa1294610 | -0.804733 | 1.874614e-49 | -8.615850e-47 |
| Msa0136070 | Msa1294610 | -0.819522 | 1.111412e-52 | -8.615850e-47 |
| Msa0136100 | Msa1294610 | -0.805654 | 1.202345e-49 | -8.615850e-47 |
| Msa0147250 | Msa1294610 | -0.806127 | 9.566527e-50 | -8.615850e-47 |
| Msa0148120 | Msa1294610 | -0.825502 | 4.527038e-54 | -8.615850e-47 |
| Msa0150800 | Msa1294610 | -0.812750 | 3.623115e-51 | -8.615850e-47 |
| Msa0156650 | Msa1294610 | 0.827352 | 1.640165e-54 | -8.615850e-47 |
| Msa0160550 | Msa1294610 | -0.830908 | 2.252608e-55 | -8.615850e-47 |
| Msa0162770 | Msa1294610 | 0.874775 | 5.189294e-68 | -8.615850e-47 |
| Msa0169140 | Msa1294610 | 0.845423 | 4.099121e-59 | -8.615850e-47 |
| Msa0172780 | Msa1294610 | -0.802339 | 5.879505e-49 | -8.615850e-47 |
| Msa0172970 | Msa1294610 | -0.809740 | 1.630015e-50 | -8.615850e-47 |
| Msa0180990 | Msa1294610 | 0.806476 | 8.076904e-50 | -8.615850e-47 |
| Msa0184780 | Msa1294610 | -0.804758 | 1.852304e-49 | -8.615850e-47 |
| Msa0197660 | Msa1294610 | -0.821302 | 4.339188e-53 | -8.615850e-47 |
| Msa0228070 | Msa1294610 | -0.821182 | 4.626679e-53 | -8.615850e-47 |
| Msa0229490 | Msa1294610 | 0.830986 | 2.155937e-55 | -8.615850e-47 |
| Msa1237940 | Msa1294610 | -0.800957 | 1.129124e-48 | -8.615850e-47 |
| Msa1245940 | Msa1294610 | 0.828283 | 9.797785e-55 | -8.615850e-47 |
| Msa1249640 | Msa1294610 | 0.947054 | 1.416233e-105 | -8.615850e-47 |
| Msa1254370 | Msa1294610 | 0.960453 | 1.418909e-118 | -8.615850e-47 |
| Msa1259070 | Msa1294610 | 0.826862 | 2.148493e-54 | -8.615850e-47 |
| Msa1259490 | Msa1294610 | 0.845671 | 3.511092e-59 | -8.615850e-47 |
| Msa1259590 | Msa1294610 | 0.850626 | 1.503705e-60 | -8.615850e-47 |
| Msa1260130 | Msa1294610 | -0.817309 | 3.524773e-52 | -8.615850e-47 |
| Msa1262920 | Msa1294610 | -0.800761 | 1.238237e-48 | -8.615850e-47 |
| Msa1269580 | Msa1294610 | 0.812569 | 3.969257e-51 | -8.615850e-47 |
| Msa1270960 | Msa1294610 | 0.843393 | 1.440649e-58 | -8.615850e-47 |
| Msa1271210 | Msa1294610 | -0.802852 | 4.609392e-49 | -8.615850e-47 |
| Msa1275360 | Msa1294610 | -0.804435 | 2.162945e-49 | -8.615850e-47 |
| Msa1294610 | Msa1299180 | 0.820128 | 8.077663e-53 | -8.615850e-47 |
| Msa1294610 | Msa1299290 | 0.841295 | 5.183278e-58 | -8.615850e-47 |
| Msa1294610 | Msa1300050 | -0.827621 | 1.414268e-54 | -8.615850e-47 |
| Msa1294610 | Msa1302100 | -0.810697 | 1.013448e-50 | -8.615850e-47 |
| Msa1294610 | Msa1302190 | 0.855985 | 4.367866e-62 | -8.615850e-47 |
| Msa1294610 | Msa1307660 | 0.827860 | 1.238885e-54 | -8.615850e-47 |
| Msa1294610 | Msa1308080 | 0.844138 | 9.099092e-59 | -8.615850e-47 |
| Msa1294610 | Msa1310770 | 0.808180 | 3.515824e-50 | -8.615850e-47 |
| Msa1294610 | Msa1332040 | 0.904293 | 1.428439e-79 | -8.615850e-47 |
| Msa1294610 | Msa1332870 | 0.811240 | 7.728595e-51 | -8.615850e-47 |
| Msa1294610 | Msa1362880 | -0.836659 | 8.222290e-57 | -8.615850e-47 |
| Msa1294610 | Msa1365700 | 0.834661 | 2.634403e-56 | -8.615850e-47 |
| Msa1294610 | Msa1371090 | -0.803180 | 3.943036e-49 | -8.615850e-47 |
| Msa1294610 | Msa1395230 | 0.840977 | 6.280702e-58 | -8.615850e-47 |
| Msa1294610 | Msa1400610 | 0.823270 | 1.515733e-53 | -8.615850e-47 |
| Msa1294610 | Msa1403340 | -0.827603 | 1.428121e-54 | -8.615850e-47 |
| Msa1294610 | Msa1403930 | 0.846757 | 1.777406e-59 | -8.615850e-47 |
| Msa1294610 | Msa1410100 | -0.831537 | 1.577967e-55 | -8.615850e-47 |
| Msa1294610 | Msa1410430 | 0.833884 | 4.126507e-56 | -8.615850e-47 |
| Msa1294610 | Msa1417830 | 0.806453 | 8.166318e-50 | -8.615850e-47 |
| Msa1294610 | Msa1419800 | 0.813757 | 2.178118e-51 | -8.615850e-47 |
| Msa1294610 | Msa1420990 | -0.823675 | 1.219233e-53 | -8.615850e-47 |
| Msa1294610 | Msa1426030 | -0.827403 | 1.595183e-54 | -8.615850e-47 |
| Msa1294610 | Msa1429360 | 0.814486 | 1.503592e-51 | -8.615850e-47 |
| Msa1294610 | Msa1440000 | -0.816378 | 5.704994e-52 | -8.615850e-47 |
| Msa1294610 | Msa1444740 | -0.802283 | 6.038319e-49 | -8.615850e-47 |
| Msa1294610 | Msa1445420 | 0.802775 | 4.779617e-49 | -8.615850e-47 |
| Msa1294610 | Msa1445610 | 0.841376 | 4.932441e-58 | -8.615850e-47 |
| Msa1294610 | Msa1449250 | 0.815124 | 1.085448e-51 | -8.615850e-47 |
| Msa1294610 | Msa1453780 | 0.885655 | 6.741630e-72 | -8.615850e-47 |
| Msa1294610 | Msa1455490 | -0.821585 | 3.733135e-53 | -8.615850e-47 |
| Msa1294610 | Msa1459760 | 0.815888 | 7.340616e-52 | -8.615850e-47 |
| Msa1294610 | Msa1465960 | -0.813033 | 3.140741e-51 | -8.615850e-47 |
| Msa0369050 | Msa1294610 | -0.809219 | 2.108586e-50 | -8.615850e-47 |
| Msa0372340 | Msa1294610 | -0.829652 | 4.567273e-55 | -8.615850e-47 |
| Msa0380040 | Msa1294610 | -0.817289 | 3.561768e-52 | -8.615850e-47 |
| Msa0399340 | Msa1294610 | -0.818348 | 2.054866e-52 | -8.615850e-47 |
| Msa0414950 | Msa1294610 | 0.810479 | 1.129148e-50 | -8.615850e-47 |
| Msa0421780 | Msa1294610 | 0.830729 | 2.492513e-55 | -8.615850e-47 |
| Msa0429290 | Msa1294610 | -0.837374 | 5.398189e-57 | -8.615850e-47 |
| Msa0436280 | Msa1294610 | 0.813801 | 2.129964e-51 | -8.615850e-47 |
| Msa0442200 | Msa1294610 | -0.831806 | 1.354800e-55 | -8.615850e-47 |
| Msa0442850 | Msa1294610 | -0.801930 | 7.138212e-49 | -8.615850e-47 |
| Msa0443920 | Msa1294610 | -0.800603 | 1.334060e-48 | -8.615850e-47 |
| Msa0459770 | Msa1294610 | 0.811558 | 6.594540e-51 | -8.615850e-47 |
| Msa0460400 | Msa1294610 | 0.807293 | 5.425350e-50 | -8.615850e-47 |
| Msa0465790 | Msa1294610 | -0.806464 | 8.122953e-50 | -8.615850e-47 |
| Msa0467900 | Msa1294610 | 0.842579 | 2.372108e-58 | -8.615850e-47 |
| Msa0467960 | Msa1294610 | 0.819486 | 1.132601e-52 | -8.615850e-47 |
| Msa0475580 | Msa1294610 | -0.834856 | 2.352671e-56 | -8.615850e-47 |
| Msa0479660 | Msa1294610 | -0.800134 | 1.661878e-48 | -8.615850e-47 |
| Msa0479970 | Msa1294610 | -0.802892 | 4.520676e-49 | -8.615850e-47 |
| Msa0993290 | Msa1294610 | -0.828504 | 8.667406e-55 | -8.615850e-47 |
| Msa0993600 | Msa1294610 | -0.823074 | 1.684582e-53 | -8.615850e-47 |
| Msa0999050 | Msa1294610 | 0.801094 | 1.058759e-48 | -8.615850e-47 |
| Msa1004900 | Msa1294610 | 0.805950 | 1.041958e-49 | -8.615850e-47 |
| Msa1012830 | Msa1294610 | -0.834413 | 3.041401e-56 | -8.615850e-47 |
| Msa1031470 | Msa1294610 | 0.830491 | 2.850440e-55 | -8.615850e-47 |
| Msa1033320 | Msa1294610 | 0.805117 | 1.558643e-49 | -8.615850e-47 |
| Msa1033410 | Msa1294610 | 0.837322 | 5.565062e-57 | -8.615850e-47 |
| Msa1039880 | Msa1294610 | -0.827817 | 1.268607e-54 | -8.615850e-47 |
| Msa1046020 | Msa1294610 | -0.838141 | 3.430102e-57 | -8.615850e-47 |
| Msa1046060 | Msa1294610 | -0.840684 | 7.498263e-58 | -8.615850e-47 |
| Msa1063510 | Msa1294610 | -0.803587 | 3.247073e-49 | -8.615850e-47 |
| Msa1069660 | Msa1294610 | 0.811780 | 5.897950e-51 | -8.615850e-47 |
| Msa1070550 | Msa1294610 | 0.810767 | 9.787811e-51 | -8.615850e-47 |
| Msa1072460 | Msa1294610 | 0.842953 | 1.886758e-58 | -8.615850e-47 |
| Msa1073070 | Msa1294610 | 0.807871 | 4.089818e-50 | -8.615850e-47 |
| Msa1076810 | Msa1294610 | 0.802050 | 6.742973e-49 | -8.615850e-47 |
| Msa1077030 | Msa1294610 | -0.810350 | 1.204202e-50 | -8.615850e-47 |
| Msa1079370 | Msa1294610 | 0.821321 | 4.296896e-53 | -8.615850e-47 |
| Msa1091100 | Msa1294610 | -0.826476 | 2.657082e-54 | -8.615850e-47 |
| Msa1100240 | Msa1294610 | 0.802020 | 6.840146e-49 | -8.615850e-47 |
| Msa0239800 | Msa1294610 | -0.823496 | 1.342512e-53 | -8.615850e-47 |
| Msa0259860 | Msa1294610 | 0.803748 | 3.006754e-49 | -8.615850e-47 |
| Msa0260680 | Msa1294610 | -0.819021 | 1.445086e-52 | -8.615850e-47 |
| Msa0260950 | Msa1294610 | 0.815275 | 1.004691e-51 | -8.615850e-47 |
| Msa0269450 | Msa1294610 | -0.816192 | 6.275862e-52 | -8.615850e-47 |
| Msa0269810 | Msa1294610 | -0.814011 | 1.914175e-51 | -8.615850e-47 |
| Msa0271960 | Msa1294610 | 0.810748 | 9.880344e-51 | -8.615850e-47 |
| Msa0279790 | Msa1294610 | -0.805275 | 1.444130e-49 | -8.615850e-47 |
| Msa0280090 | Msa1294610 | -0.814233 | 1.710212e-51 | -8.615850e-47 |
| Msa0289250 | Msa1294610 | -0.827488 | 1.522227e-54 | -8.615850e-47 |
| Msa0294560 | Msa1294610 | 0.820516 | 6.581902e-53 | -8.615850e-47 |
| Msa0306210 | Msa1294610 | 0.818671 | 1.735649e-52 | -8.615850e-47 |
| Msa0317510 | Msa1294610 | -0.816180 | 6.317058e-52 | -8.615850e-47 |
| Msa0326670 | Msa1294610 | -0.804211 | 2.408497e-49 | -8.615850e-47 |
| Msa0333720 | Msa1294610 | 0.833886 | 4.120524e-56 | -8.615850e-47 |
| Msa0336420 | Msa1294610 | -0.809949 | 1.468997e-50 | -8.615850e-47 |
| Msa0340450 | Msa1294610 | -0.804262 | 2.350973e-49 | -8.615850e-47 |
| Msa0344830 | Msa1294610 | -0.800221 | 1.595881e-48 | -8.615850e-47 |
| Msa0350990 | Msa1294610 | -0.804379 | 2.222699e-49 | -8.615850e-47 |
| Msa0351030 | Msa1294610 | -0.809315 | 2.010934e-50 | -8.615850e-47 |
| Msa0351080 | Msa1294610 | -0.810849 | 9.392322e-51 | -8.615850e-47 |
| Msa1116130 | Msa1294610 | 0.815015 | 1.147975e-51 | -8.615850e-47 |
| Msa1121450 | Msa1294610 | 0.807328 | 5.332775e-50 | -8.615850e-47 |
| Msa1134090 | Msa1294610 | -0.822962 | 1.789016e-53 | -8.615850e-47 |
| Msa1143930 | Msa1294610 | 0.865704 | 4.867876e-65 | -8.615850e-47 |
| Msa1145250 | Msa1294610 | 0.811350 | 7.316828e-51 | -8.615850e-47 |
| Msa1157420 | Msa1294610 | 0.825467 | 4.613357e-54 | -8.615850e-47 |
| Msa1177260 | Msa1294610 | 0.808755 | 2.649392e-50 | -8.615850e-47 |
| Msa1181550 | Msa1294610 | -0.830306 | 3.162715e-55 | -8.615850e-47 |
| Msa1186950 | Msa1294610 | 0.824900 | 6.281326e-54 | -8.615850e-47 |
| Msa1190890 | Msa1294610 | 0.818529 | 1.869581e-52 | -8.615850e-47 |
| Msa1191470 | Msa1294610 | 0.847807 | 9.152553e-60 | -8.615850e-47 |
| Msa1191890 | Msa1294610 | 0.833088 | 6.518964e-56 | -8.615850e-47 |
| Msa1201430 | Msa1294610 | 0.941954 | 1.686905e-101 | -8.615850e-47 |
| Msa1208890 | Msa1294610 | 0.813138 | 2.978633e-51 | -8.615850e-47 |
| Msa1211140 | Msa1294610 | 0.843706 | 1.187816e-58 | -8.615850e-47 |
| Msa1217430 | Msa1294610 | 0.856605 | 2.874425e-62 | -8.615850e-47 |
| Msa0509390 | Msa1294610 | -0.802123 | 6.513105e-49 | -8.615850e-47 |
| Msa0512750 | Msa1294610 | -0.830150 | 3.452488e-55 | -8.615850e-47 |
| Msa0519220 | Msa1294610 | -0.836102 | 1.139247e-56 | -8.615850e-47 |
| Msa0528020 | Msa1294610 | 0.803124 | 4.048519e-49 | -8.615850e-47 |
| Msa0553220 | Msa1294610 | 0.880602 | 4.794324e-70 | -8.615850e-47 |
| Msa0555450 | Msa1294610 | -0.823490 | 1.347128e-53 | -8.615850e-47 |
| Msa0558690 | Msa1294610 | -0.806019 | 1.007812e-49 | -8.615850e-47 |
| Msa0563260 | Msa1294610 | 0.860602 | 1.842195e-63 | -8.615850e-47 |
| Msa0580420 | Msa1294610 | -0.800358 | 1.496523e-48 | -8.615850e-47 |
| Msa0585000 | Msa1294610 | 0.856499 | 3.087710e-62 | -8.615850e-47 |
| Msa0586520 | Msa1294610 | 0.839732 | 1.329148e-57 | -8.615850e-47 |
| Msa0592440 | Msa1294610 | -0.818738 | 1.675646e-52 | -8.615850e-47 |
| Msa0860900 | Msa1294610 | 0.840278 | 9.573057e-58 | -8.615850e-47 |
| Msa0864470 | Msa1294610 | 0.833890 | 4.112436e-56 | -8.615850e-47 |
| Msa0867050 | Msa1294610 | 0.832715 | 8.069226e-56 | -8.615850e-47 |
| Msa0867520 | Msa1294610 | 0.801668 | 8.076511e-49 | -8.615850e-47 |
| Msa0870150 | Msa1294610 | -0.800806 | 1.212757e-48 | -8.615850e-47 |
| Msa0898670 | Msa1294610 | -0.807195 | 5.689925e-50 | -8.615850e-47 |
| Msa0909000 | Msa1294610 | 0.820643 | 6.153768e-53 | -8.615850e-47 |
| Msa0930460 | Msa1294610 | 0.832545 | 8.892286e-56 | -8.615850e-47 |
| Msa0942550 | Msa1294610 | 0.832943 | 7.082765e-56 | -8.615850e-47 |
| Msa0942560 | Msa1294610 | 0.826952 | 2.045322e-54 | -8.615850e-47 |
| Msa0947660 | Msa1294610 | -0.804583 | 2.014569e-49 | -8.615850e-47 |
| Msa0968680 | Msa1294610 | -0.801697 | 7.965792e-49 | -8.615850e-47 |
| Msa0969810 | Msa1294610 | -0.812060 | 5.125595e-51 | -8.615850e-47 |
| Msa0970420 | Msa1294610 | -0.801962 | 7.030510e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1294610 | MtrunA17_Chr8g0371401 | 92.453 | 371 | 22 | 3 | 1 | 368 | 1 | 368 | 0.0 | 607 |
| Msa1294610 | MtrunA17_Chr5g0405961 | 41.791 | 402 | 170 | 17 | 4 | 368 | 15 | 389 | 6.82e-69 | 225 |
| Msa1294610 | MtrunA17_Chr1g0157011 | 36.458 | 384 | 179 | 18 | 17 | 368 | 91 | 441 | 4.88e-32 | 126 |
| Msa1294610 | MtrunA17_Chr3g0143261 | 30.571 | 350 | 165 | 17 | 59 | 368 | 88 | 399 | 5.03e-19 | 88.2 |
| Msa1294610 | MtrunA17_Chr3g0143171 | 31.231 | 333 | 148 | 19 | 75 | 368 | 1 | 291 | 2.69e-14 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1294610 | AT4G35890.2 | 33.333 | 357 | 173 | 17 | 37 | 368 | 86 | 402 | 2.84e-30 | 120 |
| Msa1294610 | AT4G35890.1 | 33.333 | 357 | 173 | 17 | 37 | 368 | 86 | 402 | 1.82e-29 | 119 |
| Msa1294610 | AT5G66100.1 | 31.165 | 369 | 176 | 18 | 26 | 368 | 52 | 368 | 2.91e-18 | 86.3 |
| Msa1294610 | AT5G66100.2 | 30.154 | 325 | 158 | 17 | 49 | 347 | 66 | 347 | 8.96e-11 | 63.2 |
Find 166 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCGCTTAATTGCAATTT+TGG | 0.104445 | 8_3:+52408359 | Msa1294610:three_prime_UTR |
| GCCACCAATCCCACCTTATA+TGG | 0.166487 | 8_3:+52406442 | Msa1294610:CDS |
| ATCTCCGTAGCAAAATAATT+TGG | 0.211790 | 8_3:-52405273 | None:intergenic |
| TGGCCATTGGATTGGGAATC+AGG | 0.243284 | 8_3:-52405301 | None:intergenic |
| TTGGTGGCGGTGGCGGTGGC+GGG | 0.264134 | 8_3:-52406427 | None:intergenic |
| ACCAGATTGACTACTATTTC+AGG | 0.266021 | 8_3:+52406689 | Msa1294610:CDS |
| ATTGGTGGCGGTGGCGGTGG+CGG | 0.281862 | 8_3:-52406428 | None:intergenic |
| TTGTTTCCAGATCAATGTTT+TGG | 0.295458 | 8_3:-52408167 | None:intergenic |
| TTTGGTTTGAGAGTGAATTA+AGG | 0.309884 | 8_3:-52405255 | None:intergenic |
| CTGTGAATCGATGGAAATAA+AGG | 0.315887 | 8_3:-52408384 | None:intergenic |
| TGGCGGCTGGCGGCCTCCAT+TGG | 0.323639 | 8_3:-52406069 | None:intergenic |
| GGTGGCGGTGGCGGTGGCGG+GGG | 0.324422 | 8_3:-52406425 | None:intergenic |
| CTCCAATGCTGCTGCTTCTT+CGG | 0.327782 | 8_3:+52405514 | Msa1294610:CDS |
| GTCTGCTTCCAGAGTTAAAA+TGG | 0.329463 | 8_3:-52406268 | None:intergenic |
| TCCGGTTCCTGGATGAATTT+CGG | 0.329667 | 8_3:-52406208 | None:intergenic |
| TATAACATGTGACTGATTAA+TGG | 0.335264 | 8_3:+52408326 | Msa1294610:three_prime_UTR |
| ATAAAATAAGGAGGCGGAAT+TGG | 0.343985 | 8_3:+52408076 | Msa1294610:three_prime_UTR |
| CCACCTTATATGGGCTCATA+TGG | 0.349352 | 8_3:+52406452 | Msa1294610:CDS |
| CAATCATAACTCTGCTCAAA+TGG | 0.349628 | 8_3:+52406139 | Msa1294610:CDS |
| TGGTGGCGGTGGCGGTGGCG+GGG | 0.351267 | 8_3:-52406426 | None:intergenic |
| TGGCGATTTCGCCGGAGCTT+TGG | 0.359704 | 8_3:-52405576 | None:intergenic |
| CTGGCTCCAAGGTGCGGCGG+CGG | 0.361110 | 8_3:-52405339 | None:intergenic |
| TTAACGGTAGAGACAATTAT+AGG | 0.363096 | 8_3:+52406339 | Msa1294610:CDS |
| GGTGGGATTGGTGGCGGTGG+CGG | 0.365904 | 8_3:-52406434 | None:intergenic |
| GAAGAGGAACATGGATGATC+AGG | 0.368604 | 8_3:+52406846 | Msa1294610:CDS |
| GGGATTGGTGGCGGTGGCGG+TGG | 0.369908 | 8_3:-52406431 | None:intergenic |
| CCAAGGTGCGGCGGCGGGAG+AGG | 0.373375 | 8_3:-52405333 | None:intergenic |
| GTTGTAGACCACCGCCATTC+CGG | 0.378736 | 8_3:-52406226 | None:intergenic |
| CGGCGCTGAGGCTGATCATT+GGG | 0.381172 | 8_3:-52406188 | None:intergenic |
| GATTTGTTCCACAGTTTGTA+AGG | 0.390687 | 8_3:+52406369 | Msa1294610:CDS |
| ACCACCGCCATTCCGGTTCC+TGG | 0.392452 | 8_3:-52406219 | None:intergenic |
| CCTCTCCCGCCGCCGCACCT+TGG | 0.396404 | 8_3:+52405333 | Msa1294610:CDS |
| CTCTGGAAGCAGACGTGATC+AGG | 0.400093 | 8_3:+52406277 | Msa1294610:CDS |
| TATCCATATGAGCCCATATA+AGG | 0.400182 | 8_3:-52406455 | None:intergenic |
| ACAAACTGTGGAACAAATCT+TGG | 0.401130 | 8_3:-52406365 | None:intergenic |
| GCGTTCATGGCCATTGGATT+GGG | 0.402955 | 8_3:-52405308 | None:intergenic |
| GGTGGTGATGGCGGTGGTGG+TGG | 0.410660 | 8_3:-52405596 | None:intergenic |
| GCCATCACCACCACAGGAAT+TGG | 0.412805 | 8_3:+52405607 | Msa1294610:CDS |
| GCGGCGGAGGAAGGAGGAGG+AGG | 0.419591 | 8_3:-52405410 | None:intergenic |
| TGATCAGGACCGCGGAAATC+AGG | 0.421066 | 8_3:+52406292 | Msa1294610:CDS |
| AGCGTTCATGGCCATTGGAT+TGG | 0.423387 | 8_3:-52405309 | None:intergenic |
| TGTGGTGGTGATGGCGGTGG+TGG | 0.424964 | 8_3:-52405599 | None:intergenic |
| TGCTGCTGCTTCTTCGGTCA+TGG | 0.429405 | 8_3:+52405520 | Msa1294610:CDS |
| GAATATCCAAAACATTGATC+TGG | 0.432389 | 8_3:+52408161 | Msa1294610:three_prime_UTR |
| GGCGGGAGAGGAAGCGTTCA+TGG | 0.432822 | 8_3:-52405321 | None:intergenic |
| CTCTCCTCAGAAGCAAGTTA+AGG | 0.433186 | 8_3:+52405968 | Msa1294610:CDS |
| TGCACAAACGGTACACTTCT+CGG | 0.433948 | 8_3:-52406604 | None:intergenic |
| CGATTTCGCCGGAGCTTTGG+CGG | 0.441633 | 8_3:-52405573 | None:intergenic |
| GGAATTGGTGAAACCTTCCT+TGG | 0.443310 | 8_3:+52405622 | Msa1294610:CDS |
| ACCTGAAATAGTAGTCAATC+TGG | 0.445908 | 8_3:-52406690 | None:intergenic |
| ATCTGAATCCGCCAAAGCTC+CGG | 0.446417 | 8_3:+52405565 | Msa1294610:CDS |
| TGACAACATTCAGATTGTAT+TGG | 0.447780 | 8_3:+52407880 | Msa1294610:three_prime_UTR |
| TTCATCTGTTGTTGAAGTGC+AGG | 0.450747 | 8_3:+52407916 | Msa1294610:three_prime_UTR |
| GAAGACATCGACAACACTTC+CGG | 0.453122 | 8_3:+52405464 | Msa1294610:CDS |
| ACAGCGGCGGAGGAAGGAGG+AGG | 0.454286 | 8_3:-52405413 | None:intergenic |
| TTGGAGGGTTTACTCCAAAC+AGG | 0.455281 | 8_3:-52405497 | None:intergenic |
| TCACAGTTTCATAACGTCAA+TGG | 0.458834 | 8_3:+52408111 | Msa1294610:three_prime_UTR |
| CAGCGGTGGAGGCAACAATC+TGG | 0.459815 | 8_3:-52405358 | None:intergenic |
| TGGCTCCAAGGTGCGGCGGC+GGG | 0.460627 | 8_3:-52405338 | None:intergenic |
| GCCGAAATTCATCCAGGAAC+CGG | 0.461700 | 8_3:+52406207 | Msa1294610:CDS |
| GGTTTCGTTGCTGTCCCACC+AGG | 0.463812 | 8_3:+52406110 | Msa1294610:CDS |
| GACCGAAGAAGCAGCAGCAT+TGG | 0.465776 | 8_3:-52405516 | None:intergenic |
| GAGGAAGCGTTCATGGCCAT+TGG | 0.466060 | 8_3:-52405314 | None:intergenic |
| GAAGATATCGGTTGCACAAA+CGG | 0.466726 | 8_3:-52406616 | None:intergenic |
| GGTTCTCTAAATTTAATAGC+AGG | 0.468479 | 8_3:+52406873 | Msa1294610:exon |
| CCTTGAGGCGCAGACATTTG+TGG | 0.469144 | 8_3:-52406089 | None:intergenic |
| TAGTATTGGGCATGATTAGT+AGG | 0.473060 | 8_3:-52406401 | None:intergenic |
| CCCATATAAGGTGGGATTGG+TGG | 0.473411 | 8_3:-52406443 | None:intergenic |
| TTGAGCAGAGTTATGATTGT+GGG | 0.478241 | 8_3:-52406135 | None:intergenic |
| ATCGACCTTGCCTCAATCGC+AGG | 0.478474 | 8_3:+52405649 | Msa1294610:CDS |
| ATGGGCTCATATGGATATCA+TGG | 0.478647 | 8_3:+52406461 | Msa1294610:CDS |
| CGAAGAAGCAGCAGCATTGG+AGG | 0.481797 | 8_3:-52405513 | None:intergenic |
| TACGGCGGAAGCAGCGGTGG+AGG | 0.484516 | 8_3:-52405369 | None:intergenic |
| TTAGTATGCAACTCAGAATC+CGG | 0.489983 | 8_3:-52406658 | None:intergenic |
| GAGGAAGGAGGAGGAGGTGA+CGG | 0.494008 | 8_3:-52405404 | None:intergenic |
| GGAACATGGATGATCAGGGC+TGG | 0.494066 | 8_3:+52406851 | Msa1294610:CDS |
| GGCCATTGGATTGGGAATCA+GGG | 0.495667 | 8_3:-52405300 | None:intergenic |
| CCACCAATCCCACCTTATAT+GGG | 0.499497 | 8_3:+52406443 | Msa1294610:CDS |
| CTAACGCTTCAAATGATGTA+TGG | 0.503281 | 8_3:+52406559 | Msa1294610:CDS |
| GAAAGTGTCGACAGCGGCGG+AGG | 0.507299 | 8_3:-52405423 | None:intergenic |
| CGGTCATGGATGCTGACTCA+TGG | 0.507318 | 8_3:+52405534 | Msa1294610:CDS |
| ACCAATTCCTGTGGTGGTGA+TGG | 0.511057 | 8_3:-52405608 | None:intergenic |
| GAGCCCATATAAGGTGGGAT+TGG | 0.512163 | 8_3:-52406446 | None:intergenic |
| GTGTCGACAGCGGCGGAGGA+AGG | 0.512183 | 8_3:-52405419 | None:intergenic |
| GTCTTCCGCCGCCTCAGTGA+CGG | 0.512716 | 8_3:-52405447 | None:intergenic |
| TCCTGTGGTGGTGATGGCGG+TGG | 0.513238 | 8_3:-52405602 | None:intergenic |
| TTGGGCACAAATCCAGCTCT+TGG | 0.515928 | 8_3:-52406170 | None:intergenic |
| GTATCCTTAACTTGCTTCTG+AGG | 0.520478 | 8_3:-52405972 | None:intergenic |
| ACCACCGCCATCACCACCAC+AGG | 0.524419 | 8_3:+52405601 | Msa1294610:CDS |
| CATACATCATTTGAAGCGTT+AGG | 0.525907 | 8_3:-52406558 | None:intergenic |
| TCCAGGAACCGGAATGGCGG+TGG | 0.529103 | 8_3:+52406218 | Msa1294610:CDS |
| TAAGGTGGGATTGGTGGCGG+TGG | 0.530491 | 8_3:-52406437 | None:intergenic |
| AGGTACGGCGGAAGCAGCGG+TGG | 0.532026 | 8_3:-52405372 | None:intergenic |
| TGGAGAATATTGTTCGGATG+AGG | 0.532604 | 8_3:+52408260 | Msa1294610:three_prime_UTR |
| CCACAAATGTCTGCGCCTCA+AGG | 0.534512 | 8_3:+52406089 | Msa1294610:CDS |
| ATGGAACATCTACCAAGAGC+TGG | 0.535798 | 8_3:+52406158 | Msa1294610:CDS |
| ATATAAGGTGGGATTGGTGG+CGG | 0.538708 | 8_3:-52406440 | None:intergenic |
| GCATGATTAGTAGGCGGTGG+AGG | 0.541418 | 8_3:-52406392 | None:intergenic |
| AATTCAAACACGTCTTCCAA+TGG | 0.542364 | 8_3:+52406053 | Msa1294610:CDS |
| GGTGGTGGTGGCGATTTCGC+CGG | 0.543934 | 8_3:-52405584 | None:intergenic |
| GAACATGGATGATCAGGGCT+GGG | 0.545097 | 8_3:+52406852 | Msa1294610:CDS |
| CAGACATTTGTGGCGGCTGG+CGG | 0.546833 | 8_3:-52406079 | None:intergenic |
| TGTTCGGATGAGGCAGGAAG+CGG | 0.550019 | 8_3:+52408270 | Msa1294610:three_prime_UTR |
| TGCAACTCAGAATCCGGAGG+TGG | 0.551141 | 8_3:-52406652 | None:intergenic |
| GTTCGGATGAGGCAGGAAGC+GGG | 0.552139 | 8_3:+52408271 | Msa1294610:three_prime_UTR |
| GCAACGACACATACTTGAAG+AGG | 0.552646 | 8_3:+52406830 | Msa1294610:CDS |
| GAATATTGTTCGGATGAGGC+AGG | 0.553635 | 8_3:+52408264 | Msa1294610:three_prime_UTR |
| CTCGGAGGCTCCACATGCAA+AGG | 0.554785 | 8_3:-52406586 | None:intergenic |
| GTACTAAAACTGTGAATCGA+TGG | 0.557881 | 8_3:-52408393 | None:intergenic |
| TCGACAGCGGCGGAGGAAGG+AGG | 0.564961 | 8_3:-52405416 | None:intergenic |
| AATAAAACACTTCATAACCT+TGG | 0.565964 | 8_3:+52405224 | None:intergenic |
| CCATATGAGCCCATATAAGG+TGG | 0.568642 | 8_3:-52406452 | None:intergenic |
| AAGCAAGTTAAGGATACTGC+AGG | 0.569915 | 8_3:+52405978 | Msa1294610:CDS |
| TTGGCGGATTCAGATAAAGC+AGG | 0.573000 | 8_3:-52405557 | None:intergenic |
| TGGGCATGATTAGTAGGCGG+TGG | 0.573030 | 8_3:-52406395 | None:intergenic |
| GGAGGTGACGGCGATGAATG+AGG | 0.573341 | 8_3:-52405392 | None:intergenic |
| TTTCGCCGTCACTGAGGCGG+CGG | 0.577187 | 8_3:+52405442 | Msa1294610:CDS |
| AACAATCTGGCTCCAAGGTG+CGG | 0.577674 | 8_3:-52405345 | None:intergenic |
| GAGGCAACAATCTGGCTCCA+AGG | 0.579221 | 8_3:-52405350 | None:intergenic |
| TTTAGGGTGATAAAATAAGG+AGG | 0.579670 | 8_3:+52408067 | Msa1294610:intron |
| GGTCTACAACCACGCGGAGA+TGG | 0.584916 | 8_3:+52406239 | Msa1294610:CDS |
| CCGGTGGTAAGAGACCTGTT+TGG | 0.585862 | 8_3:+52405483 | Msa1294610:CDS |
| AAGAGGAACATGGATGATCA+GGG | 0.588462 | 8_3:+52406847 | Msa1294610:CDS |
| GGTTTCACCAATTCCTGTGG+TGG | 0.591849 | 8_3:-52405614 | None:intergenic |
| CACTTTCGCCGTCACTGAGG+CGG | 0.594778 | 8_3:+52405439 | Msa1294610:CDS |
| CTGGATGAATTTCGGCGCTG+AGG | 0.595383 | 8_3:-52406200 | None:intergenic |
| CACATACTTGAAGAGGAACA+TGG | 0.596708 | 8_3:+52406837 | Msa1294610:CDS |
| AACCCTGATTCCCAATCCAA+TGG | 0.597508 | 8_3:+52405298 | Msa1294610:exon |
| AGGGTGATAAAATAAGGAGG+CGG | 0.599307 | 8_3:+52408070 | Msa1294610:intron |
| ATGAGGTACGGCGGAAGCAG+CGG | 0.604517 | 8_3:-52405375 | None:intergenic |
| GAGTTATGATTGTGGGACCC+TGG | 0.608836 | 8_3:-52406128 | None:intergenic |
| GTATGGTCCACCTTTGCATG+TGG | 0.613005 | 8_3:+52406576 | Msa1294610:CDS |
| AATTCATCCAGGAACCGGAA+TGG | 0.615009 | 8_3:+52406212 | Msa1294610:CDS |
| TGACGGCGATGAATGAGGTA+CGG | 0.620582 | 8_3:-52405387 | None:intergenic |
| GAAGAAGCAGCAGCATTGGA+GGG | 0.621002 | 8_3:-52405512 | None:intergenic |
| CCAAACAGGTCTCTTACCAC+CGG | 0.621816 | 8_3:-52405483 | None:intergenic |
| GGAGGCTCCACATGCAAAGG+TGG | 0.622207 | 8_3:-52406583 | None:intergenic |
| CATATGAGCCCATATAAGGT+GGG | 0.622209 | 8_3:-52406451 | None:intergenic |
| TTTGAGCAGAGTTATGATTG+TGG | 0.622984 | 8_3:-52406136 | None:intergenic |
| CATTCCAGTCCTGATTTCCG+CGG | 0.624273 | 8_3:-52406301 | None:intergenic |
| AAATACCTGCGATTGAGGCA+AGG | 0.626925 | 8_3:-52405654 | None:intergenic |
| TCAAACACGTCTTCCAATGG+AGG | 0.628375 | 8_3:+52406056 | Msa1294610:CDS |
| TATGATTGTGGGACCCTGGT+GGG | 0.628962 | 8_3:-52406124 | None:intergenic |
| AGGCAAGGTCGATAAATCCA+AGG | 0.629817 | 8_3:-52405639 | None:intergenic |
| TGAGGCGCAGACATTTGTGG+CGG | 0.632231 | 8_3:-52406086 | None:intergenic |
| GGCGAAAGTGTCGACAGCGG+CGG | 0.635606 | 8_3:-52405426 | None:intergenic |
| GAAGGTTTCACCAATTCCTG+TGG | 0.639283 | 8_3:-52405617 | None:intergenic |
| AAGGTCGATAAATCCAAGGA+AGG | 0.645541 | 8_3:-52405635 | None:intergenic |
| TCATCCAGGAACCGGAATGG+CGG | 0.654453 | 8_3:+52406215 | Msa1294610:CDS |
| GTTTCGTTGCTGTCCCACCA+GGG | 0.657439 | 8_3:+52406111 | Msa1294610:CDS |
| AATCTGGCTCCAAGGTGCGG+CGG | 0.658713 | 8_3:-52405342 | None:intergenic |
| AATTCCTGTGGTGGTGATGG+CGG | 0.664267 | 8_3:-52405605 | None:intergenic |
| GAATTAAGGAATTTATACCA+AGG | 0.667605 | 8_3:-52405241 | None:intergenic |
| GTATGCAACTCAGAATCCGG+AGG | 0.681468 | 8_3:-52406655 | None:intergenic |
| AGCAGACGTGATCAGGACCG+CGG | 0.696086 | 8_3:+52406284 | Msa1294610:CDS |
| GACATCGACAACACTTCCGG+TGG | 0.701044 | 8_3:+52405467 | Msa1294610:CDS |
| GACGGCGAAAGTGTCGACAG+CGG | 0.707075 | 8_3:-52405429 | None:intergenic |
| CGACACTTTCGCCGTCACTG+AGG | 0.708576 | 8_3:+52405436 | Msa1294610:CDS |
| GGTGGAGGCCTTACAAACTG+TGG | 0.712069 | 8_3:-52406377 | None:intergenic |
| CGGCGATGAATGAGGTACGG+CGG | 0.718688 | 8_3:-52405384 | None:intergenic |
| TATTGGGCATGATTAGTAGG+CGG | 0.723347 | 8_3:-52406398 | None:intergenic |
| GGGACAGCAACGAAACCTTG+AGG | 0.727311 | 8_3:-52406104 | None:intergenic |
| TTATGATTGTGGGACCCTGG+TGG | 0.738203 | 8_3:-52406125 | None:intergenic |
| TGGTGAGAACCATCTCCGCG+TGG | 0.763757 | 8_3:-52406248 | None:intergenic |
| ACAAACGGTACACTTCTCGG+AGG | 0.802512 | 8_3:-52406601 | None:intergenic |
| GGCGGTGGTCTACAACCACG+CGG | 0.809396 | 8_3:+52406233 | Msa1294610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGTAATTTTTTTAAATAG+GGG | - | chr8_3:52407197-52407216 | None:intergenic | 10.0% |
| !!! | AATTTTACTATTTTTTGATT+TGG | + | chr8_3:52407484-52407503 | Msa1294610:intron | 10.0% |
| !! | AAAACAATATATTTATGATA+TGG | - | chr8_3:52408550-52408569 | None:intergenic | 10.0% |
| !! | CAAAACAATAAAATGAAAAT+TGG | - | chr8_3:52406738-52406757 | None:intergenic | 15.0% |
| !!! | TTTTAATTAAATCTTTGACA+TGG | + | chr8_3:52406937-52406956 | Msa1294610:intron | 15.0% |
| !! | TTTAATTAAATCTTTGACAT+GGG | + | chr8_3:52406938-52406957 | Msa1294610:intron | 15.0% |
| !! | ATTCAATAACAATTTGTATT+AGG | + | chr8_3:52407126-52407145 | Msa1294610:intron | 15.0% |
| !!! | TTGTAATTTTTTTAAATAGG+GGG | - | chr8_3:52407196-52407215 | None:intergenic | 15.0% |
| !! | TCAAAAGATTATTAATACAA+AGG | - | chr8_3:52407449-52407468 | None:intergenic | 15.0% |
| !!! | GTATTAATAATCTTTTGATA+TGG | + | chr8_3:52407451-52407470 | Msa1294610:intron | 15.0% |
| !! | TGATAATATCAATTATAATG+TGG | + | chr8_3:52407791-52407810 | Msa1294610:intron | 15.0% |
| !! | GATAATATCAATTATAATGT+GGG | + | chr8_3:52407792-52407811 | Msa1294610:intron | 15.0% |
| !!! | AATCTGTTACTTTTATTTTT+AGG | + | chr8_3:52408050-52408069 | Msa1294610:intron | 15.0% |
| !!! | ATCTGTTACTTTTATTTTTA+GGG | + | chr8_3:52408051-52408070 | Msa1294610:intron | 15.0% |
| !!! | CTTTTCTTAAACAATTTTAA+TGG | + | chr8_3:52408240-52408259 | Msa1294610:three_prime_UTR | 15.0% |
| !!! | ATATTTTCAGATTTGAAAAT+GGG | - | chr8_3:52408418-52408437 | None:intergenic | 15.0% |
| !!! | TATATTTTCAGATTTGAAAA+TGG | - | chr8_3:52408419-52408438 | None:intergenic | 15.0% |
| !! | AATAAATAAGCAACTAAAGT+GGG | - | chr8_3:52405686-52405705 | None:intergenic | 20.0% |
| !! | TAATAAATAAGCAACTAAAG+TGG | - | chr8_3:52405687-52405706 | None:intergenic | 20.0% |
| !!! | TTCCTTTATTTATCAAGTTA+GGG | + | chr8_3:52405738-52405757 | Msa1294610:intron | 20.0% |
| !! | GCATATAACTGAAATATATT+TGG | + | chr8_3:52405795-52405814 | Msa1294610:intron | 20.0% |
| !!! | AATATATTTGGAATTGTTAC+TGG | + | chr8_3:52405807-52405826 | Msa1294610:intron | 20.0% |
| !!! | GCTCATAATAGAAATTTTAA+CGG | + | chr8_3:52406323-52406342 | Msa1294610:CDS | 20.0% |
| !! | AAAAATATTGCAGAAGATAT+CGG | - | chr8_3:52406631-52406650 | None:intergenic | 20.0% |
| !! | ATTCAATAAAGTAAGTTGTT+TGG | + | chr8_3:52406896-52406915 | Msa1294610:intron | 20.0% |
| !!! | TTTTGTCATTTTCTTTCATA+GGG | + | chr8_3:52407372-52407391 | Msa1294610:intron | 20.0% |
| !!! | ATTTTTAGGGTGATAAAATA+AGG | + | chr8_3:52408064-52408083 | Msa1294610:intron | 20.0% |
| !!! | TTTTAATGGAGAATATTGTT+CGG | + | chr8_3:52408254-52408273 | Msa1294610:three_prime_UTR | 20.0% |
| !!! | AAAAAAAAAACTTCTAAAGC+TGG | - | chr8_3:52408447-52408466 | None:intergenic | 20.0% |
| ! | GAATTAAGGAATTTATACCA+AGG | - | chr8_3:52405244-52405263 | None:intergenic | 25.0% |
| !!! | CAAACCAAATTATTTTGCTA+CGG | + | chr8_3:52405269-52405288 | Msa1294610:five_prime_UTR | 25.0% |
| !! | GTTCCTTTATTTATCAAGTT+AGG | + | chr8_3:52405737-52405756 | Msa1294610:intron | 25.0% |
| ! | AACCCTAACTTGATAAATAA+AGG | - | chr8_3:52405743-52405762 | None:intergenic | 25.0% |
| !!! | TTTCTGTTTTGTTATGTTTG+TGG | + | chr8_3:52405885-52405904 | Msa1294610:intron | 25.0% |
| !!! | TTGTTTTGAGTGTTGATTTT+AGG | + | chr8_3:52405926-52405945 | Msa1294610:intron | 25.0% |
| !!! | TGTTTTGAGTGTTGATTTTA+GGG | + | chr8_3:52405927-52405946 | Msa1294610:intron | 25.0% |
| ! | TGACATAATCAATTTATCGT+TGG | + | chr8_3:52407012-52407031 | Msa1294610:intron | 25.0% |
| !! | TTAATCAATATCTTTTACCC+TGG | + | chr8_3:52407056-52407075 | Msa1294610:intron | 25.0% |
| !!! | AAAATCGCAACTTTTTGAAA+CGG | - | chr8_3:52407171-52407190 | None:intergenic | 25.0% |
| ! | ATCATATTTCCCTTATGTTA+GGG | + | chr8_3:52407313-52407332 | Msa1294610:intron | 25.0% |
| !!! | CTTTTGTCATTTTCTTTCAT+AGG | + | chr8_3:52407371-52407390 | Msa1294610:intron | 25.0% |
| !!! | TTTGTCATTTTCTTTCATAG+GGG | + | chr8_3:52407373-52407392 | Msa1294610:intron | 25.0% |
| ! | TAGAAGAACAATCATAAAAG+AGG | - | chr8_3:52407533-52407552 | None:intergenic | 25.0% |
| ! | CGATAAAATTAGAAAATGAG+TGG | + | chr8_3:52407563-52407582 | Msa1294610:intron | 25.0% |
| ! | TAAAATTAGAAAATGAGTGG+AGG | + | chr8_3:52407566-52407585 | Msa1294610:intron | 25.0% |
| ! | AAGTGAAAATCAAAAGGATT+TGG | - | chr8_3:52407674-52407693 | None:intergenic | 25.0% |
| ! | GTGAAAAAGTGAAAATCAAA+AGG | - | chr8_3:52407680-52407699 | None:intergenic | 25.0% |
| ! | GTTATCTACTAAACAAACAA+CGG | - | chr8_3:52407823-52407842 | None:intergenic | 25.0% |
| !!! | AATGCATTTTTTTGTCTCTT+AGG | + | chr8_3:52407844-52407863 | Msa1294610:intron | 25.0% |
| ! | GTACTAAATTAGAATGTTTG+TGG | - | chr8_3:52407969-52407988 | None:intergenic | 25.0% |
| ! | GATCTGGAAACAAATAAAAA+TGG | + | chr8_3:52408177-52408196 | Msa1294610:three_prime_UTR | 25.0% |
| ! | TATAACATGTGACTGATTAA+TGG | + | chr8_3:52408326-52408345 | Msa1294610:three_prime_UTR | 25.0% |
| ! | TATGCATTTCACAAATTCAA+TGG | - | chr8_3:52408499-52408518 | None:intergenic | 25.0% |
| !! | TTTGGTTTGAGAGTGAATTA+AGG | - | chr8_3:52405258-52405277 | None:intergenic | 30.0% |
| ATCTCCGTAGCAAAATAATT+TGG | - | chr8_3:52405276-52405295 | None:intergenic | 30.0% | |
| ! | TGATAAGTTTTCTGATGAGT+TGG | - | chr8_3:52406026-52406045 | None:intergenic | 30.0% |
| TTAACGGTAGAGACAATTAT+AGG | + | chr8_3:52406339-52406358 | Msa1294610:CDS | 30.0% | |
| TTCAGGTAACGTTTATCTAT+TGG | + | chr8_3:52406706-52406725 | Msa1294610:intron | 30.0% | |
| GGTTCTCTAAATTTAATAGC+AGG | + | chr8_3:52406873-52406892 | Msa1294610:exon | 30.0% | |
| !!! | AAATCGCAACTTTTTGAAAC+GGG | - | chr8_3:52407170-52407189 | None:intergenic | 30.0% |
| ! | GTTTCAAAAAGTTGCGATTT+TGG | + | chr8_3:52407170-52407189 | Msa1294610:intron | 30.0% |
| !! | GCAACTTTTTGAGAAGATAA+GGG | + | chr8_3:52407282-52407301 | Msa1294610:intron | 30.0% |
| !! | CAACTTTTTGAGAAGATAAG+GGG | + | chr8_3:52407283-52407302 | Msa1294610:intron | 30.0% |
| GATCATATTTCCCTTATGTT+AGG | + | chr8_3:52407312-52407331 | Msa1294610:intron | 30.0% | |
| TCATATTTCCCTTATGTTAG+GGG | + | chr8_3:52407314-52407333 | Msa1294610:intron | 30.0% | |
| !!! | TTGTCATTTTCTTTCATAGG+GGG | + | chr8_3:52407374-52407393 | Msa1294610:intron | 30.0% |
| !!! | GTTTTAAGAAGTTGCGATTT+TGG | - | chr8_3:52407401-52407420 | None:intergenic | 30.0% |
| TGACAACATTCAGATTGTAT+TGG | + | chr8_3:52407880-52407899 | Msa1294610:three_prime_UTR | 30.0% | |
| ! | TTTAGGGTGATAAAATAAGG+AGG | + | chr8_3:52408067-52408086 | Msa1294610:intron | 30.0% |
| GAATATCCAAAACATTGATC+TGG | + | chr8_3:52408161-52408180 | Msa1294610:three_prime_UTR | 30.0% | |
| ! | TTGTTTCCAGATCAATGTTT+TGG | - | chr8_3:52408170-52408189 | None:intergenic | 30.0% |
| ACAAATAAAAATGGTGCATC+TGG | + | chr8_3:52408186-52408205 | Msa1294610:three_prime_UTR | 30.0% | |
| ! | TTGTTATGAATTTTCTCACG+AGG | + | chr8_3:52408301-52408320 | Msa1294610:three_prime_UTR | 30.0% |
| ! | TCTTCGCTTAATTGCAATTT+TGG | + | chr8_3:52408359-52408378 | Msa1294610:three_prime_UTR | 30.0% |
| !! | AAAAAAACTTCTAAAGCTGG+AGG | - | chr8_3:52408444-52408463 | None:intergenic | 30.0% |
| GAAAAAAATACCTGCGATTG+AGG | - | chr8_3:52405662-52405681 | None:intergenic | 35.0% | |
| AATTCAAACACGTCTTCCAA+TGG | + | chr8_3:52406053-52406072 | Msa1294610:CDS | 35.0% | |
| TTGAGCAGAGTTATGATTGT+GGG | - | chr8_3:52406138-52406157 | None:intergenic | 35.0% | |
| TTTGAGCAGAGTTATGATTG+TGG | - | chr8_3:52406139-52406158 | None:intergenic | 35.0% | |
| CAATCATAACTCTGCTCAAA+TGG | + | chr8_3:52406139-52406158 | Msa1294610:CDS | 35.0% | |
| ACAAACTGTGGAACAAATCT+TGG | - | chr8_3:52406368-52406387 | None:intergenic | 35.0% | |
| ! | GATTTGTTCCACAGTTTGTA+AGG | + | chr8_3:52406369-52406388 | Msa1294610:CDS | 35.0% |
| ! | TAGTATTGGGCATGATTAGT+AGG | - | chr8_3:52406404-52406423 | None:intergenic | 35.0% |
| TATCCATATGAGCCCATATA+AGG | - | chr8_3:52406458-52406477 | None:intergenic | 35.0% | |
| ! | CATACATCATTTGAAGCGTT+AGG | - | chr8_3:52406561-52406580 | None:intergenic | 35.0% |
| CTAACGCTTCAAATGATGTA+TGG | + | chr8_3:52406559-52406578 | Msa1294610:CDS | 35.0% | |
| !!! | TGCAATATTTTTTCCACCTC+CGG | + | chr8_3:52406639-52406658 | Msa1294610:CDS | 35.0% |
| TTAGTATGCAACTCAGAATC+CGG | - | chr8_3:52406661-52406680 | None:intergenic | 35.0% | |
| ACCAGATTGACTACTATTTC+AGG | + | chr8_3:52406689-52406708 | Msa1294610:CDS | 35.0% | |
| ACCTGAAATAGTAGTCAATC+TGG | - | chr8_3:52406693-52406712 | None:intergenic | 35.0% | |
| AACAACGATCTTCAAATCCA+GGG | - | chr8_3:52407076-52407095 | None:intergenic | 35.0% | |
| !! | CGCAACTTTTTGAGAAGATA+AGG | + | chr8_3:52407281-52407300 | Msa1294610:intron | 35.0% |
| CATATTTCCCTTATGTTAGG+GGG | + | chr8_3:52407315-52407334 | Msa1294610:intron | 35.0% | |
| ! | AAGAGCATATTTCCCTAAAC+AGG | + | chr8_3:52407342-52407361 | Msa1294610:intron | 35.0% |
| AGAGCATATTTCCCTAAACA+GGG | + | chr8_3:52407343-52407362 | Msa1294610:intron | 35.0% | |
| !!! | TGTCATTTTCTTTCATAGGG+GGG | + | chr8_3:52407375-52407394 | Msa1294610:intron | 35.0% |
| TCGCAACTTCTTAAAACTTG+AGG | + | chr8_3:52407404-52407423 | Msa1294610:intron | 35.0% | |
| ATAAAATAAGGAGGCGGAAT+TGG | + | chr8_3:52408076-52408095 | Msa1294610:three_prime_UTR | 35.0% | |
| TCACAGTTTCATAACGTCAA+TGG | + | chr8_3:52408111-52408130 | Msa1294610:three_prime_UTR | 35.0% | |
| CTGTGAATCGATGGAAATAA+AGG | - | chr8_3:52408387-52408406 | None:intergenic | 35.0% | |
| GTACTAAAACTGTGAATCGA+TGG | - | chr8_3:52408396-52408415 | None:intergenic | 35.0% | |
| GCATTTCACAAATTCAATGG+TGG | - | chr8_3:52408496-52408515 | None:intergenic | 35.0% | |
| AAGGTCGATAAATCCAAGGA+AGG | - | chr8_3:52405638-52405657 | None:intergenic | 40.0% | |
| !!! | GAGTGTTGATTTTAGGGTAC+TGG | + | chr8_3:52405933-52405952 | Msa1294610:intron | 40.0% |
| !! | GTATCCTTAACTTGCTTCTG+AGG | - | chr8_3:52405975-52405994 | None:intergenic | 40.0% |
| AAGCAAGTTAAGGATACTGC+AGG | + | chr8_3:52405978-52405997 | Msa1294610:CDS | 40.0% | |
| !!! | GGTTCTCACCATTTTAACTC+TGG | + | chr8_3:52406260-52406279 | Msa1294610:CDS | 40.0% |
| GTCTGCTTCCAGAGTTAAAA+TGG | - | chr8_3:52406271-52406290 | None:intergenic | 40.0% | |
| TATTGGGCATGATTAGTAGG+CGG | - | chr8_3:52406401-52406420 | None:intergenic | 40.0% | |
| CATATGAGCCCATATAAGGT+GGG | - | chr8_3:52406454-52406473 | None:intergenic | 40.0% | |
| ATGGGCTCATATGGATATCA+TGG | + | chr8_3:52406461-52406480 | Msa1294610:CDS | 40.0% | |
| ! | GAAGATATCGGTTGCACAAA+CGG | - | chr8_3:52406619-52406638 | None:intergenic | 40.0% |
| TCACTGCAAAAGACAAGTTG+TGG | - | chr8_3:52406799-52406818 | None:intergenic | 40.0% | |
| CACATACTTGAAGAGGAACA+TGG | + | chr8_3:52406837-52406856 | Msa1294610:CDS | 40.0% | |
| AAGAGGAACATGGATGATCA+GGG | + | chr8_3:52406847-52406866 | Msa1294610:CDS | 40.0% | |
| CAACAACGATCTTCAAATCC+AGG | - | chr8_3:52407077-52407096 | None:intergenic | 40.0% | |
| !!! | TCAGCAATTTTGGGACGAAA+GGG | - | chr8_3:52407226-52407245 | None:intergenic | 40.0% |
| ! | CTTTTGACCCCCTAACATAA+GGG | - | chr8_3:52407325-52407344 | None:intergenic | 40.0% |
| ! | TCTTTTGACCCCCTAACATA+AGG | - | chr8_3:52407326-52407345 | None:intergenic | 40.0% |
| GAGCATATTTCCCTAAACAG+GGG | + | chr8_3:52407344-52407363 | Msa1294610:intron | 40.0% | |
| AGCATATTTCCCTAAACAGG+GGG | + | chr8_3:52407345-52407364 | Msa1294610:intron | 40.0% | |
| TTCATCTGTTGTTGAAGTGC+AGG | + | chr8_3:52407916-52407935 | Msa1294610:three_prime_UTR | 40.0% | |
| AGGGTGATAAAATAAGGAGG+CGG | + | chr8_3:52408070-52408089 | Msa1294610:intron | 40.0% | |
| TGGAGAATATTGTTCGGATG+AGG | + | chr8_3:52408260-52408279 | Msa1294610:three_prime_UTR | 40.0% | |
| AACCCTGATTCCCAATCCAA+TGG | + | chr8_3:52405298-52405317 | Msa1294610:exon | 45.0% | |
| GAAGACATCGACAACACTTC+CGG | + | chr8_3:52405464-52405483 | Msa1294610:CDS | 45.0% | |
| TTGGAGGGTTTACTCCAAAC+AGG | - | chr8_3:52405500-52405519 | None:intergenic | 45.0% | |
| !! | TTGGCGGATTCAGATAAAGC+AGG | - | chr8_3:52405560-52405579 | None:intergenic | 45.0% |
| GAAGGTTTCACCAATTCCTG+TGG | - | chr8_3:52405620-52405639 | None:intergenic | 45.0% | |
| GGAATTGGTGAAACCTTCCT+TGG | + | chr8_3:52405622-52405641 | Msa1294610:CDS | 45.0% | |
| AGGCAAGGTCGATAAATCCA+AGG | - | chr8_3:52405642-52405661 | None:intergenic | 45.0% | |
| AAATACCTGCGATTGAGGCA+AGG | - | chr8_3:52405657-52405676 | None:intergenic | 45.0% | |
| CTCTCCTCAGAAGCAAGTTA+AGG | + | chr8_3:52405968-52405987 | Msa1294610:CDS | 45.0% | |
| TCAAACACGTCTTCCAATGG+AGG | + | chr8_3:52406056-52406075 | Msa1294610:CDS | 45.0% | |
| ATGGAACATCTACCAAGAGC+TGG | + | chr8_3:52406158-52406177 | Msa1294610:CDS | 45.0% | |
| TCCGGTTCCTGGATGAATTT+CGG | - | chr8_3:52406211-52406230 | None:intergenic | 45.0% | |
| AATTCATCCAGGAACCGGAA+TGG | + | chr8_3:52406212-52406231 | Msa1294610:CDS | 45.0% | |
| ! | ATATAAGGTGGGATTGGTGG+CGG | - | chr8_3:52406443-52406462 | None:intergenic | 45.0% |
| CCACCAATCCCACCTTATAT+GGG | + | chr8_3:52406443-52406462 | Msa1294610:CDS | 45.0% | |
| CCATATGAGCCCATATAAGG+TGG | - | chr8_3:52406455-52406474 | None:intergenic | 45.0% | |
| CCACCTTATATGGGCTCATA+TGG | + | chr8_3:52406452-52406471 | Msa1294610:CDS | 45.0% | |
| TGCACAAACGGTACACTTCT+CGG | - | chr8_3:52406607-52406626 | None:intergenic | 45.0% | |
| GCAACGACACATACTTGAAG+AGG | + | chr8_3:52406830-52406849 | Msa1294610:CDS | 45.0% | |
| GAAGAGGAACATGGATGATC+AGG | + | chr8_3:52406846-52406865 | Msa1294610:CDS | 45.0% | |
| !!! | CAGCAATTTTGGGACGAAAG+GGG | - | chr8_3:52407225-52407244 | None:intergenic | 45.0% |
| !!! | CTCAGCAATTTTGGGACGAA+AGG | - | chr8_3:52407227-52407246 | None:intergenic | 45.0% |
| ! | GGCGTCTTCTCAGCAATTTT+GGG | - | chr8_3:52407235-52407254 | None:intergenic | 45.0% |
| ! | TGGCGTCTTCTCAGCAATTT+TGG | - | chr8_3:52407236-52407255 | None:intergenic | 45.0% |
| !!! | GCGACTATGACCCCTTTTTT+GGG | - | chr8_3:52407264-52407283 | None:intergenic | 45.0% |
| !!! | TGCGACTATGACCCCTTTTT+TGG | - | chr8_3:52407265-52407284 | None:intergenic | 45.0% |
| CAAAAGTGACCCCCTGTTTA+GGG | - | chr8_3:52407357-52407376 | None:intergenic | 45.0% | |
| ACAAAAGTGACCCCCTGTTT+AGG | - | chr8_3:52407358-52407377 | None:intergenic | 45.0% | |
| GAATATTGTTCGGATGAGGC+AGG | + | chr8_3:52408264-52408283 | Msa1294610:three_prime_UTR | 45.0% | |
| !!! | AATTGTAATTTTTTTAAATA+GGG | - | chr8_3:52407198-52407217 | None:intergenic | 5.0% |
| !!! | AAATTGTAATTTTTTTAAAT+AGG | - | chr8_3:52407199-52407218 | None:intergenic | 5.0% |
| !!! | ATTTAAAAAAATTACAATTT+TGG | + | chr8_3:52407199-52407218 | Msa1294610:intron | 5.0% |
| ! | GGCCATTGGATTGGGAATCA+GGG | - | chr8_3:52405303-52405322 | None:intergenic | 50.0% |
| ! | TGGCCATTGGATTGGGAATC+AGG | - | chr8_3:52405304-52405323 | None:intergenic | 50.0% |
| GCGTTCATGGCCATTGGATT+GGG | - | chr8_3:52405311-52405330 | None:intergenic | 50.0% | |
| AGCGTTCATGGCCATTGGAT+TGG | - | chr8_3:52405312-52405331 | None:intergenic | 50.0% | |
| ! | AACAATCTGGCTCCAAGGTG+CGG | - | chr8_3:52405348-52405367 | None:intergenic | 50.0% |
| TGACGGCGATGAATGAGGTA+CGG | - | chr8_3:52405390-52405409 | None:intergenic | 50.0% | |
| CCAAACAGGTCTCTTACCAC+CGG | - | chr8_3:52405486-52405505 | None:intergenic | 50.0% | |
| ! | GAAGAAGCAGCAGCATTGGA+GGG | - | chr8_3:52405515-52405534 | None:intergenic | 50.0% |
| ! | CTCCAATGCTGCTGCTTCTT+CGG | + | chr8_3:52405514-52405533 | Msa1294610:CDS | 50.0% |
| ATCTGAATCCGCCAAAGCTC+CGG | + | chr8_3:52405565-52405584 | Msa1294610:CDS | 50.0% | |
| !! | AATTCCTGTGGTGGTGATGG+CGG | - | chr8_3:52405608-52405627 | None:intergenic | 50.0% |
| ! | ACCAATTCCTGTGGTGGTGA+TGG | - | chr8_3:52405611-52405630 | None:intergenic | 50.0% |
| GGTTTCACCAATTCCTGTGG+TGG | - | chr8_3:52405617-52405636 | None:intergenic | 50.0% | |
| TATGATTGTGGGACCCTGGT+GGG | - | chr8_3:52406127-52406146 | None:intergenic | 50.0% | |
| TTATGATTGTGGGACCCTGG+TGG | - | chr8_3:52406128-52406147 | None:intergenic | 50.0% | |
| GAGTTATGATTGTGGGACCC+TGG | - | chr8_3:52406131-52406150 | None:intergenic | 50.0% | |
| TTGGGCACAAATCCAGCTCT+TGG | - | chr8_3:52406173-52406192 | None:intergenic | 50.0% | |
| GCCGAAATTCATCCAGGAAC+CGG | + | chr8_3:52406207-52406226 | Msa1294610:CDS | 50.0% | |
| CATTCCAGTCCTGATTTCCG+CGG | - | chr8_3:52406304-52406323 | None:intergenic | 50.0% | |
| GCCACCAATCCCACCTTATA+TGG | + | chr8_3:52406442-52406461 | Msa1294610:CDS | 50.0% | |
| CCCATATAAGGTGGGATTGG+TGG | - | chr8_3:52406446-52406465 | None:intergenic | 50.0% | |
| GAGCCCATATAAGGTGGGAT+TGG | - | chr8_3:52406449-52406468 | None:intergenic | 50.0% | |
| GTATGGTCCACCTTTGCATG+TGG | + | chr8_3:52406576-52406595 | Msa1294610:CDS | 50.0% | |
| ACAAACGGTACACTTCTCGG+AGG | - | chr8_3:52406604-52406623 | None:intergenic | 50.0% | |
| GTATGCAACTCAGAATCCGG+AGG | - | chr8_3:52406658-52406677 | None:intergenic | 50.0% | |
| GAACATGGATGATCAGGGCT+GGG | + | chr8_3:52406852-52406871 | Msa1294610:CDS | 50.0% | |
| ACGCCACGTGTCCCAAAAAA+GGG | + | chr8_3:52407250-52407269 | Msa1294610:intron | 50.0% | |
| !! | GAGGAAGCGTTCATGGCCAT+TGG | - | chr8_3:52405317-52405336 | None:intergenic | 55.0% |
| ! | GAGGCAACAATCTGGCTCCA+AGG | - | chr8_3:52405353-52405372 | None:intergenic | 55.0% |
| GACATCGACAACACTTCCGG+TGG | + | chr8_3:52405467-52405486 | Msa1294610:CDS | 55.0% | |
| CCGGTGGTAAGAGACCTGTT+TGG | + | chr8_3:52405483-52405502 | Msa1294610:CDS | 55.0% | |
| ! | CGAAGAAGCAGCAGCATTGG+AGG | - | chr8_3:52405516-52405535 | None:intergenic | 55.0% |
| GACCGAAGAAGCAGCAGCAT+TGG | - | chr8_3:52405519-52405538 | None:intergenic | 55.0% | |
| ! | TGCTGCTGCTTCTTCGGTCA+TGG | + | chr8_3:52405520-52405539 | Msa1294610:CDS | 55.0% |
| !! | CGGTCATGGATGCTGACTCA+TGG | + | chr8_3:52405534-52405553 | Msa1294610:CDS | 55.0% |
| GCCATCACCACCACAGGAAT+TGG | + | chr8_3:52405607-52405626 | Msa1294610:CDS | 55.0% | |
| ATCGACCTTGCCTCAATCGC+AGG | + | chr8_3:52405649-52405668 | Msa1294610:CDS | 55.0% | |
| TGAGGCGCAGACATTTGTGG+CGG | - | chr8_3:52406089-52406108 | None:intergenic | 55.0% | |
| CCTTGAGGCGCAGACATTTG+TGG | - | chr8_3:52406092-52406111 | None:intergenic | 55.0% | |
| CCACAAATGTCTGCGCCTCA+AGG | + | chr8_3:52406089-52406108 | Msa1294610:CDS | 55.0% | |
| GGGACAGCAACGAAACCTTG+AGG | - | chr8_3:52406107-52406126 | None:intergenic | 55.0% | |
| GTTTCGTTGCTGTCCCACCA+GGG | + | chr8_3:52406111-52406130 | Msa1294610:CDS | 55.0% | |
| CTGGATGAATTTCGGCGCTG+AGG | - | chr8_3:52406203-52406222 | None:intergenic | 55.0% | |
| ! | CTCAGCGCCGAAATTCATCC+AGG | + | chr8_3:52406201-52406220 | Msa1294610:CDS | 55.0% |
| TCATCCAGGAACCGGAATGG+CGG | + | chr8_3:52406215-52406234 | Msa1294610:CDS | 55.0% | |
| GTTGTAGACCACCGCCATTC+CGG | - | chr8_3:52406229-52406248 | None:intergenic | 55.0% | |
| ! | CTCTGGAAGCAGACGTGATC+AGG | + | chr8_3:52406277-52406296 | Msa1294610:CDS | 55.0% |
| TGATCAGGACCGCGGAAATC+AGG | + | chr8_3:52406292-52406311 | Msa1294610:CDS | 55.0% | |
| GGTGGAGGCCTTACAAACTG+TGG | - | chr8_3:52406380-52406399 | None:intergenic | 55.0% | |
| GCATGATTAGTAGGCGGTGG+AGG | - | chr8_3:52406395-52406414 | None:intergenic | 55.0% | |
| TGGGCATGATTAGTAGGCGG+TGG | - | chr8_3:52406398-52406417 | None:intergenic | 55.0% | |
| TGCAACTCAGAATCCGGAGG+TGG | - | chr8_3:52406655-52406674 | None:intergenic | 55.0% | |
| GGAACATGGATGATCAGGGC+TGG | + | chr8_3:52406851-52406870 | Msa1294610:CDS | 55.0% | |
| GACGCCACGTGTCCCAAAAA+AGG | + | chr8_3:52407249-52407268 | Msa1294610:intron | 55.0% | |
| CGCCACGTGTCCCAAAAAAG+GGG | + | chr8_3:52407251-52407270 | Msa1294610:intron | 55.0% | |
| !!! | GACCCCTTTTTTGGGACACG+TGG | - | chr8_3:52407256-52407275 | None:intergenic | 55.0% |
| TGTTCGGATGAGGCAGGAAG+CGG | + | chr8_3:52408270-52408289 | Msa1294610:three_prime_UTR | 55.0% | |
| ! | AATCTGGCTCCAAGGTGCGG+CGG | - | chr8_3:52405345-52405364 | None:intergenic | 60.0% |
| CAGCGGTGGAGGCAACAATC+TGG | - | chr8_3:52405361-52405380 | None:intergenic | 60.0% | |
| ATGAGGTACGGCGGAAGCAG+CGG | - | chr8_3:52405378-52405397 | None:intergenic | 60.0% | |
| CGGCGATGAATGAGGTACGG+CGG | - | chr8_3:52405387-52405406 | None:intergenic | 60.0% | |
| ! | GGAGGTGACGGCGATGAATG+AGG | - | chr8_3:52405395-52405414 | None:intergenic | 60.0% |
| GAGGAAGGAGGAGGAGGTGA+CGG | - | chr8_3:52405407-52405426 | None:intergenic | 60.0% | |
| !! | GACGGCGAAAGTGTCGACAG+CGG | - | chr8_3:52405432-52405451 | None:intergenic | 60.0% |
| CGACACTTTCGCCGTCACTG+AGG | + | chr8_3:52405436-52405455 | Msa1294610:CDS | 60.0% | |
| CACTTTCGCCGTCACTGAGG+CGG | + | chr8_3:52405439-52405458 | Msa1294610:CDS | 60.0% | |
| ! | CGATTTCGCCGGAGCTTTGG+CGG | - | chr8_3:52405576-52405595 | None:intergenic | 60.0% |
| TGGCGATTTCGCCGGAGCTT+TGG | - | chr8_3:52405579-52405598 | None:intergenic | 60.0% | |
| CAGACATTTGTGGCGGCTGG+CGG | - | chr8_3:52406082-52406101 | None:intergenic | 60.0% | |
| GGTTTCGTTGCTGTCCCACC+AGG | + | chr8_3:52406110-52406129 | Msa1294610:CDS | 60.0% | |
| ! | CGGCGCTGAGGCTGATCATT+GGG | - | chr8_3:52406191-52406210 | None:intergenic | 60.0% |
| ! | TCGGCGCTGAGGCTGATCAT+TGG | - | chr8_3:52406192-52406211 | None:intergenic | 60.0% |
| GGTCTACAACCACGCGGAGA+TGG | + | chr8_3:52406239-52406258 | Msa1294610:CDS | 60.0% | |
| TGGTGAGAACCATCTCCGCG+TGG | - | chr8_3:52406251-52406270 | None:intergenic | 60.0% | |
| AGCAGACGTGATCAGGACCG+CGG | + | chr8_3:52406284-52406303 | Msa1294610:CDS | 60.0% | |
| AGGACCGCGGAAATCAGGAC+TGG | + | chr8_3:52406297-52406316 | Msa1294610:CDS | 60.0% | |
| !! | CGGTGGCGGGGGATAGTATT+GGG | - | chr8_3:52406417-52406436 | None:intergenic | 60.0% |
| !! | TAAGGTGGGATTGGTGGCGG+TGG | - | chr8_3:52406440-52406459 | None:intergenic | 60.0% |
| GGAGGCTCCACATGCAAAGG+TGG | - | chr8_3:52406586-52406605 | None:intergenic | 60.0% | |
| CTCGGAGGCTCCACATGCAA+AGG | - | chr8_3:52406589-52406608 | None:intergenic | 60.0% | |
| GTTCGGATGAGGCAGGAAGC+GGG | + | chr8_3:52408271-52408290 | Msa1294610:three_prime_UTR | 60.0% | |
| !! | GGCGGGAGAGGAAGCGTTCA+TGG | - | chr8_3:52405324-52405343 | None:intergenic | 65.0% |
| !! | GAAAGTGTCGACAGCGGCGG+AGG | - | chr8_3:52405426-52405445 | None:intergenic | 65.0% |
| !! | GGCGAAAGTGTCGACAGCGG+CGG | - | chr8_3:52405429-52405448 | None:intergenic | 65.0% |
| TTTCGCCGTCACTGAGGCGG+CGG | + | chr8_3:52405442-52405461 | Msa1294610:CDS | 65.0% | |
| GTCTTCCGCCGCCTCAGTGA+CGG | - | chr8_3:52405450-52405469 | None:intergenic | 65.0% | |
| !! | GGTGGTGGTGGCGATTTCGC+CGG | - | chr8_3:52405587-52405606 | None:intergenic | 65.0% |
| !! | TGTGGTGGTGATGGCGGTGG+TGG | - | chr8_3:52405602-52405621 | None:intergenic | 65.0% |
| ACCACCGCCATCACCACCAC+AGG | + | chr8_3:52405601-52405620 | Msa1294610:CDS | 65.0% | |
| !! | TCCTGTGGTGGTGATGGCGG+TGG | - | chr8_3:52405605-52405624 | None:intergenic | 65.0% |
| GCGCAGACATTTGTGGCGGC+TGG | - | chr8_3:52406085-52406104 | None:intergenic | 65.0% | |
| TCCAGGAACCGGAATGGCGG+TGG | + | chr8_3:52406218-52406237 | Msa1294610:CDS | 65.0% | |
| ACCACCGCCATTCCGGTTCC+TGG | - | chr8_3:52406222-52406241 | None:intergenic | 65.0% | |
| GGCGGTGGTCTACAACCACG+CGG | + | chr8_3:52406233-52406252 | Msa1294610:CDS | 65.0% | |
| !! | GCGGTGGCGGGGGATAGTAT+TGG | - | chr8_3:52406418-52406437 | None:intergenic | 65.0% |
| TACGGCGGAAGCAGCGGTGG+AGG | - | chr8_3:52405372-52405391 | None:intergenic | 70.0% | |
| AGGTACGGCGGAAGCAGCGG+TGG | - | chr8_3:52405375-52405394 | None:intergenic | 70.0% | |
| ACAGCGGCGGAGGAAGGAGG+AGG | - | chr8_3:52405416-52405435 | None:intergenic | 70.0% | |
| TCGACAGCGGCGGAGGAAGG+AGG | - | chr8_3:52405419-52405438 | None:intergenic | 70.0% | |
| ! | GTGTCGACAGCGGCGGAGGA+AGG | - | chr8_3:52405422-52405441 | None:intergenic | 70.0% |
| !! | GGTGGTGATGGCGGTGGTGG+TGG | - | chr8_3:52405599-52405618 | None:intergenic | 70.0% |
| !! | ATTGGTGGCGGTGGCGGTGG+CGG | - | chr8_3:52406431-52406450 | None:intergenic | 70.0% |
| !! | GGTGGGATTGGTGGCGGTGG+CGG | - | chr8_3:52406437-52406456 | None:intergenic | 70.0% |
| TGGCTCCAAGGTGCGGCGGC+GGG | - | chr8_3:52405341-52405360 | None:intergenic | 75.0% | |
| CTGGCTCCAAGGTGCGGCGG+CGG | - | chr8_3:52405342-52405361 | None:intergenic | 75.0% | |
| GCGGCGGAGGAAGGAGGAGG+AGG | - | chr8_3:52405413-52405432 | None:intergenic | 75.0% | |
| TGGCGGCTGGCGGCCTCCAT+TGG | - | chr8_3:52406072-52406091 | None:intergenic | 75.0% | |
| !! | TTGGTGGCGGTGGCGGTGGC+GGG | - | chr8_3:52406430-52406449 | None:intergenic | 75.0% |
| !! | GGGATTGGTGGCGGTGGCGG+TGG | - | chr8_3:52406434-52406453 | None:intergenic | 75.0% |
| ! | CCAAGGTGCGGCGGCGGGAG+AGG | - | chr8_3:52405336-52405355 | None:intergenic | 80.0% |
| ! | CCTCTCCCGCCGCCGCACCT+TGG | + | chr8_3:52405333-52405352 | Msa1294610:CDS | 80.0% |
| !!! | TGGTGGCGGTGGCGGTGGCG+GGG | - | chr8_3:52406429-52406448 | None:intergenic | 80.0% |
| !! | GGTGGCGGTGGCGGTGGCGG+GGG | - | chr8_3:52406428-52406447 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 52405227 | 52408647 | 52405227 | ID=Msa1294610;Name=Msa1294610 |
| chr8_3 | mRNA | 52405227 | 52408647 | 52405227 | ID=Msa1294610-mRNA-1;Parent=Msa1294610;Name=Msa1294610-mRNA-1;_AED=0.05;_eAED=0.05;_QI=90|1|1|1|0.66|0.57|7|519|369 |
| chr8_3 | exon | 52405227 | 52405670 | 52405227 | ID=Msa1294610-mRNA-1:exon:14874;Parent=Msa1294610-mRNA-1 |
| chr8_3 | exon | 52405948 | 52406482 | 52405948 | ID=Msa1294610-mRNA-1:exon:14875;Parent=Msa1294610-mRNA-1 |
| chr8_3 | exon | 52406557 | 52406710 | 52406557 | ID=Msa1294610-mRNA-1:exon:14876;Parent=Msa1294610-mRNA-1 |
| chr8_3 | exon | 52406816 | 52406905 | 52406816 | ID=Msa1294610-mRNA-1:exon:14877;Parent=Msa1294610-mRNA-1 |
| chr8_3 | exon | 52407866 | 52407937 | 52407866 | ID=Msa1294610-mRNA-1:exon:14878;Parent=Msa1294610-mRNA-1 |
| chr8_3 | exon | 52408072 | 52408476 | 52408072 | ID=Msa1294610-mRNA-1:exon:14879;Parent=Msa1294610-mRNA-1 |
| chr8_3 | exon | 52408629 | 52408647 | 52408629 | ID=Msa1294610-mRNA-1:exon:14880;Parent=Msa1294610-mRNA-1 |
| chr8_3 | five_prime_UTR | 52405227 | 52405316 | 52405227 | ID=Msa1294610-mRNA-1:five_prime_utr;Parent=Msa1294610-mRNA-1 |
| chr8_3 | CDS | 52405317 | 52405670 | 52405317 | ID=Msa1294610-mRNA-1:cds;Parent=Msa1294610-mRNA-1 |
| chr8_3 | CDS | 52405948 | 52406482 | 52405948 | ID=Msa1294610-mRNA-1:cds;Parent=Msa1294610-mRNA-1 |
| chr8_3 | CDS | 52406557 | 52406710 | 52406557 | ID=Msa1294610-mRNA-1:cds;Parent=Msa1294610-mRNA-1 |
| chr8_3 | CDS | 52406816 | 52406882 | 52406816 | ID=Msa1294610-mRNA-1:cds;Parent=Msa1294610-mRNA-1 |
| chr8_3 | three_prime_UTR | 52406883 | 52406905 | 52406883 | ID=Msa1294610-mRNA-1:three_prime_utr;Parent=Msa1294610-mRNA-1 |
| chr8_3 | three_prime_UTR | 52407866 | 52407937 | 52407866 | ID=Msa1294610-mRNA-1:three_prime_utr;Parent=Msa1294610-mRNA-1 |
| chr8_3 | three_prime_UTR | 52408072 | 52408476 | 52408072 | ID=Msa1294610-mRNA-1:three_prime_utr;Parent=Msa1294610-mRNA-1 |
| chr8_3 | three_prime_UTR | 52408629 | 52408647 | 52408629 | ID=Msa1294610-mRNA-1:three_prime_utr;Parent=Msa1294610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
