Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0539060 | GAU48222.1 | 62.850 | 428 | 83 | 4 | 51 | 450 | 50 | 429 | 0.0 | 524 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0539060 | A0A2Z6PEX1 | 62.850 | 428 | 83 | 4 | 51 | 450 | 50 | 429 | 0.0 | 524 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008840 | Msa0539060 | 0.801816 | 7.530519e-49 | -8.615850e-47 |
| Msa0047280 | Msa0539060 | 0.828510 | 8.638271e-55 | -8.615850e-47 |
| Msa0049390 | Msa0539060 | 0.807161 | 5.785845e-50 | -8.615850e-47 |
| Msa0053700 | Msa0539060 | 0.801233 | 9.915877e-49 | -8.615850e-47 |
| Msa0065010 | Msa0539060 | 0.820938 | 5.263512e-53 | -8.615850e-47 |
| Msa0139990 | Msa0539060 | 0.823460 | 1.368521e-53 | -8.615850e-47 |
| Msa0166750 | Msa0539060 | 0.800495 | 1.403483e-48 | -8.615850e-47 |
| Msa0175200 | Msa0539060 | 0.810117 | 1.351742e-50 | -8.615850e-47 |
| Msa0226460 | Msa0539060 | 0.800506 | 1.395925e-48 | -8.615850e-47 |
| Msa0364990 | Msa0539060 | 0.801338 | 9.440565e-49 | -8.615850e-47 |
| Msa0394280 | Msa0539060 | 0.828661 | 7.942184e-55 | -8.615850e-47 |
| Msa0431770 | Msa0539060 | 0.834619 | 2.699774e-56 | -8.615850e-47 |
| Msa0436200 | Msa0539060 | 0.812691 | 3.732743e-51 | -8.615850e-47 |
| Msa0458640 | Msa0539060 | 0.810998 | 8.722272e-51 | -8.615850e-47 |
| Msa0337510 | Msa0539060 | 0.815557 | 8.698865e-52 | -8.615850e-47 |
| Msa0539050 | Msa0539060 | 0.980263 | 8.115376e-150 | -8.615850e-47 |
| Msa0539060 | Msa0576730 | 0.830735 | 2.483851e-55 | -8.615850e-47 |
| Msa0539060 | Msa0702150 | 0.805988 | 1.023011e-49 | -8.615850e-47 |
| Msa0539060 | Msa0702270 | 0.833643 | 4.741424e-56 | -8.615850e-47 |
| Msa0539060 | Msa0751010 | 0.822107 | 2.826430e-53 | -8.615850e-47 |
| Msa0539060 | Msa0757000 | 0.886505 | 3.227277e-72 | -8.615850e-47 |
| Msa0539060 | Msa0792780 | 0.809766 | 1.608894e-50 | -8.615850e-47 |
| Msa0539060 | Msa0794050 | 0.816062 | 6.709503e-52 | -8.615850e-47 |
| Msa0539060 | Msa0894920 | 0.819622 | 1.054130e-52 | -8.615850e-47 |
| Msa0539060 | Msa0912010 | 0.852304 | 5.039273e-61 | -8.615850e-47 |
| Msa0539060 | Msa0940830 | 0.808804 | 2.587234e-50 | -8.615850e-47 |
| Msa0539060 | Msa1071530 | 0.815518 | 8.874173e-52 | -8.615850e-47 |
| Msa0539060 | Msa1083880 | 0.800437 | 1.441854e-48 | -8.615850e-47 |
| Msa0539060 | Msa1132310 | 0.813295 | 2.752213e-51 | -8.615850e-47 |
| Msa0539060 | Msa1211830 | 0.801145 | 1.033499e-48 | -8.615850e-47 |
| Msa0539060 | Msa1253810 | 0.830673 | 2.572261e-55 | -8.615850e-47 |
| Msa0539060 | Msa1303580 | 0.802193 | 6.301686e-49 | -8.615850e-47 |
| Msa0539060 | Msa1323990 | 0.844466 | 7.432246e-59 | -8.615850e-47 |
| Msa0539060 | Msa1421620 | 0.828622 | 8.116035e-55 | -8.615850e-47 |
| Msa0539060 | Msa1445960 | 0.816798 | 4.593541e-52 | -8.615850e-47 |
| Msa0539060 | Msa1455280 | 0.806462 | 8.130746e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0539060 | MtrunA17_Chr5g0414621 | 57.590 | 415 | 160 | 5 | 58 | 459 | 672 | 1083 | 7.03e-149 | 451 |
| Msa0539060 | MtrunA17_Chr3g0086081 | 25.253 | 297 | 203 | 7 | 165 | 459 | 8 | 287 | 1.78e-16 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 103 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAAGGGATGCATCTTATT+TGG | 0.145304 | 4_1:-19277012 | Msa0539060:CDS |
| AATGAAAGATGAGTTATTTA+AGG | 0.170608 | 4_1:-19276414 | Msa0539060:CDS |
| ATCACAGTTGATGCCATTAT+TGG | 0.200449 | 4_1:-19275478 | Msa0539060:CDS |
| TTTGGATCGATATGAGATTT+TGG | 0.204928 | 4_1:+19279104 | None:intergenic |
| TACTTCTGCCTTCATTCCTT+TGG | 0.225653 | 4_1:+19276146 | None:intergenic |
| AGAAGTTAACTCGGTGAATT+TGG | 0.240545 | 4_1:-19276190 | Msa0539060:CDS |
| CGTGGATTCTGGTGAGTTTC+CGG | 0.249887 | 4_1:+19279046 | None:intergenic |
| GGAGTTTCCGGCGTGGATTC+TGG | 0.294811 | 4_1:+19279035 | None:intergenic |
| GCTTCATCTGCAGAGTTTAC+TGG | 0.300268 | 4_1:-19275576 | Msa0539060:CDS |
| ACTTCTGCCTTCATTCCTTT+GGG | 0.317850 | 4_1:+19276147 | None:intergenic |
| CAAATGTCTGTCTCGTCTTA+TGG | 0.325416 | 4_1:+19275634 | None:intergenic |
| ACTTTGGTGAACACAAAATA+AGG | 0.326758 | 4_1:-19276008 | Msa0539060:CDS |
| AATATCACGGGTCACAGTTT+GGG | 0.329052 | 4_1:+19276499 | None:intergenic |
| AAGGAATGAAGGCAGAAGTA+TGG | 0.329512 | 4_1:-19276143 | Msa0539060:CDS |
| TTTGGATCCACAAATCGATT+TGG | 0.332643 | 4_1:+19279086 | None:intergenic |
| TAATATCACGGGTCACAGTT+TGG | 0.333241 | 4_1:+19276498 | None:intergenic |
| GTGAATGAGGAGAATCGATT+TGG | 0.337736 | 4_1:+19279126 | None:intergenic |
| TGAGTTATTTAAGGAATTTA+CGG | 0.348018 | 4_1:-19276405 | Msa0539060:intron |
| GATATGATTGGCTCCAATAA+TGG | 0.354752 | 4_1:+19275465 | None:intergenic |
| TGAAGGGATGCATCTTATTT+GGG | 0.365880 | 4_1:-19277011 | Msa0539060:CDS |
| AAAGGTACGGCAGGAAGTTT+AGG | 0.369105 | 4_1:-19276800 | Msa0539060:CDS |
| AGAATTGAAAGAGGAGTTTC+CGG | 0.372257 | 4_1:+19279023 | None:intergenic |
| TGACCCGTGATATTATATCT+AGG | 0.394681 | 4_1:-19276490 | Msa0539060:CDS |
| GCGGAATCGAAGAATCGATT+TGG | 0.414410 | 4_1:+19279068 | None:intergenic |
| TCATGAGATCCTTCAGTTGA+AGG | 0.418974 | 4_1:+19276689 | None:intergenic |
| GGGATGGCTTGGTCGACATT+TGG | 0.420534 | 4_1:-19276122 | Msa0539060:CDS |
| AAGATGAACAACGCTACTTT+GGG | 0.421905 | 4_1:-19276761 | Msa0539060:CDS |
| AGACAAAATCATGGACTGCC+TGG | 0.424936 | 4_1:-19277070 | Msa0539060:CDS |
| CCTGTGTGCAACACTGCATC+AGG | 0.426150 | 4_1:+19276042 | None:intergenic |
| GAAGATGAACAACGCTACTT+TGG | 0.426393 | 4_1:-19276762 | Msa0539060:CDS |
| TCCTTTGGGTGCATGACCCT+TGG | 0.428211 | 4_1:+19276161 | None:intergenic |
| AACTCATCTTTCATTTCACT+TGG | 0.429996 | 4_1:+19276422 | None:intergenic |
| GGCAGTTGATTCTAACTTGT+GGG | 0.441974 | 4_1:-19275673 | Msa0539060:CDS |
| CAACTGAAGGATCTCATGAT+AGG | 0.443027 | 4_1:-19276685 | Msa0539060:CDS |
| ACTGCCATGCTGGAAAAGTA+TGG | 0.445663 | 4_1:-19275717 | Msa0539060:CDS |
| ACTGAAGTTGAGTTGTTAGT+TGG | 0.448820 | 4_1:+19276713 | None:intergenic |
| TAATCTTTCCACTTCTCAGC+TGG | 0.451939 | 4_1:+19276446 | None:intergenic |
| GACATATGACACTGCCATGC+TGG | 0.457913 | 4_1:-19275727 | Msa0539060:CDS |
| GATACAAATGATTCAAGAAA+AGG | 0.462903 | 4_1:-19276965 | Msa0539060:intron |
| GTGAAATTCAGAATTGAAAG+AGG | 0.466324 | 4_1:+19279014 | None:intergenic |
| GTCGCAGCTTAGACCTTGGT+GGG | 0.478997 | 4_1:-19275608 | Msa0539060:CDS |
| GACAAAATCATGGACTGCCT+GGG | 0.488723 | 4_1:-19277069 | Msa0539060:CDS |
| TTGCATTGGTGCTTTGTGCA+TGG | 0.488919 | 4_1:+19275431 | None:intergenic |
| GGCAGAAGTATGGGATGGCT+TGG | 0.489800 | 4_1:-19276133 | Msa0539060:CDS |
| TATCGATCCAAATCGATTTG+TGG | 0.490681 | 4_1:-19279093 | Msa0539060:CDS |
| GTGGGTCGCAGCTTAGACCT+TGG | 0.491778 | 4_1:-19275612 | Msa0539060:CDS |
| TCAGACTTCTTCTTCCACTC+TGG | 0.493139 | 4_1:+19276093 | None:intergenic |
| TTCTGAATTTCACAATTCTA+CGG | 0.494142 | 4_1:-19279004 | Msa0539060:intron |
| AAGACGAGACAGACATTTGT+GGG | 0.505405 | 4_1:-19275630 | Msa0539060:CDS |
| TTCTGATGTAGCTAAGATGT+TGG | 0.511128 | 4_1:+19275548 | None:intergenic |
| GTGAATTTGGTTGACACCAA+GGG | 0.512099 | 4_1:-19276177 | Msa0539060:CDS |
| GGTCGCAGCTTAGACCTTGG+TGG | 0.517562 | 4_1:-19275609 | Msa0539060:CDS |
| TATAATGATAGTGAAGATGA+AGG | 0.519013 | 4_1:-19277028 | Msa0539060:CDS |
| CACCGAGTTAACTTCTCGTA+AGG | 0.521322 | 4_1:+19276197 | None:intergenic |
| GAAGTTGAGTTGTTAGTTGG+TGG | 0.526674 | 4_1:+19276716 | None:intergenic |
| CATGCATGTTCTTTCCCACA+CGG | 0.531477 | 4_1:+19276260 | None:intergenic |
| CTGAAGGTCACATGGATGCT+AGG | 0.535747 | 4_1:-19275398 | Msa0539060:CDS |
| CGGCAGTTGATTCTAACTTG+TGG | 0.536084 | 4_1:-19275674 | Msa0539060:CDS |
| TAAGACGAGACAGACATTTG+TGG | 0.536150 | 4_1:-19275631 | Msa0539060:CDS |
| TCAGCGAATTCACCTTGCAT+TGG | 0.536256 | 4_1:+19275417 | None:intergenic |
| CTACTTTGGGTTCTTTCCCA+CGG | 0.537345 | 4_1:-19276748 | Msa0539060:CDS |
| TGCCTACTCCAGCTGAGAAG+TGG | 0.541113 | 4_1:-19276454 | Msa0539060:CDS |
| ACAGGAGGCTCTATAAACTT+TGG | 0.546299 | 4_1:-19276024 | Msa0539060:CDS |
| AGGAATGAAGGCAGAAGTAT+GGG | 0.547959 | 4_1:-19276142 | Msa0539060:CDS |
| GACCCGTGATATTATATCTA+GGG | 0.548986 | 4_1:-19276489 | Msa0539060:CDS |
| TCATGCACCCAAAGGAATGA+AGG | 0.549651 | 4_1:-19276154 | Msa0539060:CDS |
| AATGCAACAAAAGGTACGGC+AGG | 0.551052 | 4_1:-19276809 | Msa0539060:CDS |
| CACCCTAGATATAATATCAC+GGG | 0.552020 | 4_1:+19276487 | None:intergenic |
| GGGCTGTAAAGACAAAATCA+TGG | 0.556423 | 4_1:-19277079 | Msa0539060:intron |
| GTGCAACACTGCATCAGGTA+AGG | 0.558789 | 4_1:+19276047 | None:intergenic |
| AATCGATTCTTCGATTCCGC+CGG | 0.559487 | 4_1:-19279065 | Msa0539060:CDS |
| GATTGAATCAGTGATATGAT+TGG | 0.560626 | 4_1:+19275453 | None:intergenic |
| GATGTAGCTAAGATGTTGGA+AGG | 0.573672 | 4_1:+19275552 | None:intergenic |
| TTCCACTTCTCAGCTGGAGT+AGG | 0.583500 | 4_1:+19276452 | None:intergenic |
| ATATCACGGGTCACAGTTTG+GGG | 0.587701 | 4_1:+19276500 | None:intergenic |
| AGAATCAACTGCCGGATGAG+TGG | 0.589995 | 4_1:+19275683 | None:intergenic |
| GAGAAAAGTTATATCTGTTG+AGG | 0.597798 | 4_1:-19276663 | Msa0539060:CDS |
| GCATAACATTCATCAGCCCC+AGG | 0.599662 | 4_1:+19277052 | None:intergenic |
| CACAAGTTAGAATCAACTGC+CGG | 0.599971 | 4_1:+19275675 | None:intergenic |
| TGAATTCGCTGAAGGTCACA+TGG | 0.601074 | 4_1:-19275406 | Msa0539060:CDS |
| GGTGAATTTGGTTGACACCA+AGG | 0.603373 | 4_1:-19276178 | Msa0539060:CDS |
| ATAATGATAGTGAAGATGAA+GGG | 0.606353 | 4_1:-19277027 | Msa0539060:CDS |
| TAATATGTCAAGAACCGTGT+GGG | 0.607360 | 4_1:-19276274 | Msa0539060:CDS |
| CGTGTGGGAAAGAACATGCA+TGG | 0.611634 | 4_1:-19276259 | Msa0539060:CDS |
| ACTTCAGTACCTTCAACTGA+AGG | 0.614576 | 4_1:-19276698 | Msa0539060:CDS |
| ATGCACAAAGCACCAATGCA+AGG | 0.624945 | 4_1:-19275429 | Msa0539060:CDS |
| TGGTGAACACAAAATAAGGA+TGG | 0.626778 | 4_1:-19276004 | Msa0539060:intron |
| ATGCAAGGTGAATTCGCTGA+AGG | 0.627682 | 4_1:-19275414 | Msa0539060:CDS |
| ACAAAATCATGGACTGCCTG+GGG | 0.638168 | 4_1:-19277068 | Msa0539060:CDS |
| ACCAAGGGTCATGCACCCAA+AGG | 0.640771 | 4_1:-19276162 | Msa0539060:CDS |
| TTGGTGGATCAGTAGACCGT+GGG | 0.641476 | 4_1:+19276732 | None:intergenic |
| TCACCCTAGATATAATATCA+CGG | 0.642680 | 4_1:+19276486 | None:intergenic |
| GGCCTTACGAGAAGTTAACT+CGG | 0.652110 | 4_1:-19276199 | Msa0539060:CDS |
| ATGAAGGCAGAAGTATGGGA+TGG | 0.655095 | 4_1:-19276138 | Msa0539060:CDS |
| GGATTCTGGTGAGTTTCCGG+CGG | 0.659639 | 4_1:+19279049 | None:intergenic |
| GATGCAGTGTTGCACACAGG+AGG | 0.664451 | 4_1:-19276039 | Msa0539060:CDS |
| CCTGATGCAGTGTTGCACAC+AGG | 0.666838 | 4_1:-19276042 | Msa0539060:CDS |
| GTTGGTGGATCAGTAGACCG+TGG | 0.668860 | 4_1:+19276731 | None:intergenic |
| AAGCTGACACAAACCCACCA+AGG | 0.689462 | 4_1:+19275595 | None:intergenic |
| ACATTTGGTTGAAACCAGAG+TGG | 0.690890 | 4_1:-19276107 | Msa0539060:CDS |
| TGAAAGAGGAGTTTCCGGCG+TGG | 0.706239 | 4_1:+19279028 | None:intergenic |
| GTAATATGTCAAGAACCGTG+TGG | 0.718467 | 4_1:-19276275 | Msa0539060:CDS |
| AAACTCACCAGAATCCACGC+CGG | 0.741151 | 4_1:-19279042 | Msa0539060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTATAGTTGTATTATAA+TGG | - | chr4_1:19278195-19278214 | Msa0539060:intron | 10.0% |
| !! | TTTGAATTTCTTATTATTTC+AGG | - | chr4_1:19277121-19277140 | Msa0539060:intron | 15.0% |
| !! | GTTTATCAACAATAAAAATT+GGG | + | chr4_1:19277618-19277637 | None:intergenic | 15.0% |
| !! | TGTTTATCAACAATAAAAAT+TGG | + | chr4_1:19277619-19277638 | None:intergenic | 15.0% |
| !! | TCCTAAAAATAAATTATACA+AGG | + | chr4_1:19278170-19278189 | None:intergenic | 15.0% |
| !! | TTTAAAAAATGCAAGAAAAA+TGG | - | chr4_1:19278309-19278328 | Msa0539060:intron | 15.0% |
| !! | TATTCTAATAAATGTGTTAT+AGG | - | chr4_1:19278592-19278611 | Msa0539060:intron | 15.0% |
| !! | AACAAAGAAACTTTCTTATT+TGG | - | chr4_1:19276585-19276604 | Msa0539060:intron | 20.0% |
| !! | ATAAAATACATGTTCAACAT+TGG | - | chr4_1:19276665-19276684 | Msa0539060:CDS | 20.0% |
| !! | ATTCTGTAAATATTCTCTTA+AGG | - | chr4_1:19277232-19277251 | Msa0539060:intron | 20.0% |
| !!! | TGTGAATTTTAAGTGATTTA+TGG | - | chr4_1:19277931-19277950 | Msa0539060:intron | 20.0% |
| !! | AAATATCAAGTGTTAATATC+AGG | + | chr4_1:19277972-19277991 | None:intergenic | 20.0% |
| !! | AATGAAAGATGAGTTATTTA+AGG | - | chr4_1:19278115-19278134 | Msa0539060:intron | 20.0% |
| !! | TGAGTTATTTAAGGAATTTA+CGG | - | chr4_1:19278124-19278143 | Msa0539060:intron | 20.0% |
| !!! | GCCTTGTATAATTTATTTTT+AGG | - | chr4_1:19278166-19278185 | Msa0539060:intron | 20.0% |
| !! | TTATTGTGTAATATGAACAT+AGG | - | chr4_1:19278741-19278760 | Msa0539060:intron | 20.0% |
| !!! | ATATCTGAAATATGTTTTTC+AGG | - | chr4_1:19278778-19278797 | Msa0539060:intron | 20.0% |
| ! | TTCTGAATTTCACAATTCTA+CGG | - | chr4_1:19275525-19275544 | Msa0539060:CDS | 25.0% |
| !! | TAATTTCAAGCAAACTTTTC+AGG | - | chr4_1:19275576-19275595 | Msa0539060:CDS | 25.0% |
| !! | TTGATTTTATCAGCTTGAAT+CGG | - | chr4_1:19275608-19275627 | Msa0539060:CDS | 25.0% |
| !!! | ATATGATTTGATTGATTCGA+AGG | - | chr4_1:19275685-19275704 | Msa0539060:CDS | 25.0% |
| !! | AATACTTTTCTGCTAAGAAA+TGG | + | chr4_1:19276027-19276046 | None:intergenic | 25.0% |
| ! | CTACTTAGAGTAAGTTTATA+TGG | + | chr4_1:19276063-19276082 | None:intergenic | 25.0% |
| ! | GCACTAAAAACTTATAATCA+TGG | - | chr4_1:19276143-19276162 | Msa0539060:CDS | 25.0% |
| !!! | GCTAATATATTAGCTTGTAA+TGG | - | chr4_1:19276189-19276208 | Msa0539060:CDS | 25.0% |
| !! | AAATGACATTGACTAAGAAA+TGG | + | chr4_1:19276426-19276445 | None:intergenic | 25.0% |
| ! | CTACTATTAAATAATCCGTT+TGG | - | chr4_1:19276545-19276564 | Msa0539060:intron | 25.0% |
| ! | TTAATGTAAACATTGCTATG+TGG | - | chr4_1:19276634-19276653 | Msa0539060:intron | 25.0% |
| !! | CAATTTTGTATTATGTCAAC+TGG | + | chr4_1:19277036-19277055 | None:intergenic | 25.0% |
| !! | GTTCTGATTTTCCATAAAAT+TGG | - | chr4_1:19277091-19277110 | Msa0539060:intron | 25.0% |
| ! | TCAAGATCTAATGTGATTAT+GGG | + | chr4_1:19277319-19277338 | None:intergenic | 25.0% |
| ! | ATCAAGATCTAATGTGATTA+TGG | + | chr4_1:19277320-19277339 | None:intergenic | 25.0% |
| !! | TATAATGATAGTGAAGATGA+AGG | - | chr4_1:19277501-19277520 | Msa0539060:intron | 25.0% |
| !! | ATAATGATAGTGAAGATGAA+GGG | - | chr4_1:19277502-19277521 | Msa0539060:intron | 25.0% |
| ! | GATACAAATGATTCAAGAAA+AGG | - | chr4_1:19277564-19277583 | Msa0539060:intron | 25.0% |
| ! | CGAATGATATAATTTCTACA+CGG | - | chr4_1:19277641-19277660 | Msa0539060:intron | 25.0% |
| ! | AAGAAAACAATTATATCGCA+TGG | + | chr4_1:19277672-19277691 | None:intergenic | 25.0% |
| ! | GATACAAAAAATGCAACAAA+AGG | - | chr4_1:19277711-19277730 | Msa0539060:intron | 25.0% |
| ! | AAAAAATGCAACAAAAGGTA+CGG | - | chr4_1:19277716-19277735 | Msa0539060:intron | 25.0% |
| !! | TTTTTAAATGATCAGGATAG+CGG | + | chr4_1:19278297-19278316 | None:intergenic | 25.0% |
| !!! | CTTGCATTTTTTAAATGATC+AGG | + | chr4_1:19278304-19278323 | None:intergenic | 25.0% |
| ! | AATAAATGTGTTATAGGAGA+AGG | - | chr4_1:19278598-19278617 | Msa0539060:intron | 25.0% |
| !!! | CATCTTTTTTCTTATGAACA+CGG | + | chr4_1:19278661-19278680 | None:intergenic | 25.0% |
| !! | ATATGAGATTTTGGTGAATG+AGG | + | chr4_1:19275419-19275438 | None:intergenic | 30.0% |
| ! | TTTGGATCGATATGAGATTT+TGG | + | chr4_1:19275428-19275447 | None:intergenic | 30.0% |
| GTGAAATTCAGAATTGAAAG+AGG | + | chr4_1:19275518-19275537 | None:intergenic | 30.0% | |
| ATTAAGACAAATAGAGACAG+AGG | + | chr4_1:19275560-19275579 | None:intergenic | 30.0% | |
| CAAGTTTGAACGCTATATAA+TGG | + | chr4_1:19276347-19276366 | None:intergenic | 30.0% | |
| CTGTTATGAAAGAAACCAAA+CGG | + | chr4_1:19276563-19276582 | None:intergenic | 30.0% | |
| !!! | GGAAGTCAAGATTTTAAGAT+TGG | - | chr4_1:19276606-19276625 | Msa0539060:intron | 30.0% |
| TCTGAACTCAAATAAGGAAT+CGG | + | chr4_1:19276752-19276771 | None:intergenic | 30.0% | |
| CAGTATACAAAGTGATTAGT+TGG | + | chr4_1:19276885-19276904 | None:intergenic | 30.0% | |
| ATGGAAAATCAGAACAAATC+CGG | + | chr4_1:19277086-19277105 | None:intergenic | 30.0% | |
| ! | CAAAATGAGCACCAATTTTA+TGG | + | chr4_1:19277105-19277124 | None:intergenic | 30.0% |
| ACTAATTTCAAAGGTAACTG+AGG | - | chr4_1:19277151-19277170 | Msa0539060:intron | 30.0% | |
| TTCTCTTAAGGATGCTTAAT+TGG | - | chr4_1:19277244-19277263 | Msa0539060:intron | 30.0% | |
| GGATAACAATCAAGATCATT+TGG | + | chr4_1:19277298-19277317 | None:intergenic | 30.0% | |
| TTGTAATTATGAAACCCGAT+CGG | - | chr4_1:19277345-19277364 | Msa0539060:intron | 30.0% | |
| TCTTAAATTCTTCGGTTACT+TGG | + | chr4_1:19277403-19277422 | None:intergenic | 30.0% | |
| GTAACCGAAGAATTTAAGAA+TGG | - | chr4_1:19277404-19277423 | Msa0539060:intron | 30.0% | |
| TGCTCCATTCTTAAATTCTT+CGG | + | chr4_1:19277411-19277430 | None:intergenic | 30.0% | |
| ! | CATATAATGATAGTGAAGCT+GGG | - | chr4_1:19277429-19277448 | Msa0539060:intron | 30.0% |
| ! | ATATAATGATAGTGAAGCTG+GGG | - | chr4_1:19277430-19277449 | Msa0539060:intron | 30.0% |
| !!! | GTTTTCTTTTCTGAAATGCA+AGG | - | chr4_1:19277684-19277703 | Msa0539060:intron | 30.0% |
| GAGAAAAGTTATATCTGTTG+AGG | - | chr4_1:19277866-19277885 | Msa0539060:intron | 30.0% | |
| TCACCCTAGATATAATATCA+CGG | + | chr4_1:19278046-19278065 | None:intergenic | 30.0% | |
| AACTCATCTTTCATTTCACT+TGG | + | chr4_1:19278110-19278129 | None:intergenic | 30.0% | |
| TAGTTGTATTATAATGGTGC+AGG | - | chr4_1:19278201-19278220 | Msa0539060:intron | 30.0% | |
| AGTTGTATTATAATGGTGCA+GGG | - | chr4_1:19278202-19278221 | Msa0539060:intron | 30.0% | |
| ACTTTGGTGAACACAAAATA+AGG | - | chr4_1:19278521-19278540 | Msa0539060:intron | 30.0% | |
| CGTGTTCATAAGAAAAAAGA+TGG | - | chr4_1:19278659-19278678 | Msa0539060:intron | 30.0% | |
| GATTGAATCAGTGATATGAT+TGG | + | chr4_1:19279079-19279098 | None:intergenic | 30.0% | |
| !! | TATCGATCCAAATCGATTTG+TGG | - | chr4_1:19275436-19275455 | Msa0539060:CDS | 35.0% |
| TTTGGATCCACAAATCGATT+TGG | + | chr4_1:19275446-19275465 | None:intergenic | 35.0% | |
| AGAATTGAAAGAGGAGTTTC+CGG | + | chr4_1:19275509-19275528 | None:intergenic | 35.0% | |
| ACTGAGTAATATACAACGCT+GGG | - | chr4_1:19276166-19276185 | Msa0539060:CDS | 35.0% | |
| AATTGAGTCCATTTCAACGT+TGG | - | chr4_1:19276302-19276321 | Msa0539060:CDS | 35.0% | |
| ATTGAGTCCATTTCAACGTT+GGG | - | chr4_1:19276303-19276322 | Msa0539060:CDS | 35.0% | |
| ! | AGCAAGTTCTTTTGACCATT+TGG | + | chr4_1:19276519-19276538 | None:intergenic | 35.0% |
| ! | AATGGTCAAAAGAACTTGCT+TGG | - | chr4_1:19276519-19276538 | Msa0539060:intron | 35.0% |
| AAAATCGAAATTGACGCAGA+TGG | + | chr4_1:19276723-19276742 | None:intergenic | 35.0% | |
| ! | TTCTGCTCTGAACTCAAATA+AGG | + | chr4_1:19276758-19276777 | None:intergenic | 35.0% |
| TCTCACTCAAAGAGATACAA+GGG | + | chr4_1:19276782-19276801 | None:intergenic | 35.0% | |
| ATATGTACAGAGATATAGCC+AGG | + | chr4_1:19276809-19276828 | None:intergenic | 35.0% | |
| GTTTACATTCCTAACTAGCT+AGG | - | chr4_1:19276836-19276855 | Msa0539060:intron | 35.0% | |
| TGTAGTTTACCTAGCTAGTT+AGG | + | chr4_1:19276848-19276867 | None:intergenic | 35.0% | |
| ! | GATTAGTTGGATCGTATTAG+AGG | + | chr4_1:19276872-19276891 | None:intergenic | 35.0% |
| TCACTTTGTATACTGATCCA+TGG | - | chr4_1:19276890-19276909 | Msa0539060:intron | 35.0% | |
| CACTTTGTATACTGATCCAT+GGG | - | chr4_1:19276891-19276910 | Msa0539060:intron | 35.0% | |
| AGTAGAAAAACCTGTCAATC+TGG | - | chr4_1:19276946-19276965 | Msa0539060:intron | 35.0% | |
| GTAGAAAAACCTGTCAATCT+GGG | - | chr4_1:19276947-19276966 | Msa0539060:intron | 35.0% | |
| TAGAAAAACCTGTCAATCTG+GGG | - | chr4_1:19276948-19276967 | Msa0539060:intron | 35.0% | |
| CTTCTGGTGTCTTTACAAAA+AGG | - | chr4_1:19277008-19277027 | Msa0539060:CDS | 35.0% | |
| AGTATAAGTTCCAGAAAACC+CGG | - | chr4_1:19277064-19277083 | Msa0539060:CDS | 35.0% | |
| TGGAAAATCAGAACAAATCC+GGG | + | chr4_1:19277085-19277104 | None:intergenic | 35.0% | |
| GGCAAGAACACTAATTTCAA+AGG | - | chr4_1:19277142-19277161 | Msa0539060:intron | 35.0% | |
| TAAAAAGCTTCAGCAAGAAC+TGG | - | chr4_1:19277199-19277218 | Msa0539060:intron | 35.0% | |
| ! | TTGGTTATGCACGTTTTATC+TGG | - | chr4_1:19277263-19277282 | Msa0539060:intron | 35.0% |
| ! | GCATATAATGATAGTGAAGC+TGG | - | chr4_1:19277428-19277447 | Msa0539060:intron | 35.0% |
| ATGAAGGGATGCATCTTATT+TGG | - | chr4_1:19277517-19277536 | Msa0539060:intron | 35.0% | |
| ! | TGAAGGGATGCATCTTATTT+GGG | - | chr4_1:19277518-19277537 | Msa0539060:intron | 35.0% |
| ! | AAGATGAACAACGCTACTTT+GGG | - | chr4_1:19277768-19277787 | Msa0539060:intron | 35.0% |
| ! | ACTGAAGTTGAGTTGTTAGT+TGG | + | chr4_1:19277819-19277838 | None:intergenic | 35.0% |
| TAGAACTCATGAGCATCTTA+CGG | + | chr4_1:19277903-19277922 | None:intergenic | 35.0% | |
| TGACCCGTGATATTATATCT+AGG | - | chr4_1:19278039-19278058 | Msa0539060:intron | 35.0% | |
| GACCCGTGATATTATATCTA+GGG | - | chr4_1:19278040-19278059 | Msa0539060:intron | 35.0% | |
| CACCCTAGATATAATATCAC+GGG | + | chr4_1:19278045-19278064 | None:intergenic | 35.0% | |
| TAATATGTCAAGAACCGTGT+GGG | - | chr4_1:19278255-19278274 | Msa0539060:intron | 35.0% | |
| ! | AGAAGTTAACTCGGTGAATT+TGG | - | chr4_1:19278339-19278358 | Msa0539060:intron | 35.0% |
| TGGTGAACACAAAATAAGGA+TGG | - | chr4_1:19278525-19278544 | Msa0539060:intron | 35.0% | |
| ! | AGATGATTTTTCCACTCATC+CGG | - | chr4_1:19278835-19278854 | Msa0539060:intron | 35.0% |
| TTCTGATGTAGCTAAGATGT+TGG | + | chr4_1:19278984-19279003 | None:intergenic | 35.0% | |
| ! | ATCACAGTTGATGCCATTAT+TGG | - | chr4_1:19279051-19279070 | Msa0539060:CDS | 35.0% |
| ! | GATATGATTGGCTCCAATAA+TGG | + | chr4_1:19279067-19279086 | None:intergenic | 35.0% |
| GTGAATGAGGAGAATCGATT+TGG | + | chr4_1:19275406-19275425 | None:intergenic | 40.0% | |
| TAGCTTATGATAGCAGCTCA+TGG | - | chr4_1:19275879-19275898 | Msa0539060:CDS | 40.0% | |
| TAGCTTATGATAGCAGCTCA+TGG | - | chr4_1:19275879-19275898 | Msa0539060:CDS | 40.0% | |
| GACTGAGTAATATACAACGC+TGG | - | chr4_1:19276165-19276184 | Msa0539060:CDS | 40.0% | |
| CTGAGTAATATACAACGCTG+GGG | - | chr4_1:19276167-19276186 | Msa0539060:CDS | 40.0% | |
| TTGAGTCCATTTCAACGTTG+GGG | - | chr4_1:19276304-19276323 | Msa0539060:CDS | 40.0% | |
| TAATAGCCCCAACGTTGAAA+TGG | + | chr4_1:19276313-19276332 | None:intergenic | 40.0% | |
| CTCACTCAAAGAGATACAAG+GGG | + | chr4_1:19276781-19276800 | None:intergenic | 40.0% | |
| CTCTCACTCAAAGAGATACA+AGG | + | chr4_1:19276783-19276802 | None:intergenic | 40.0% | |
| AGTAGAACAATCATCACCCA+TGG | + | chr4_1:19276910-19276929 | None:intergenic | 40.0% | |
| TTTCAAAGGTAACTGAGGAG+AGG | - | chr4_1:19277156-19277175 | Msa0539060:intron | 40.0% | |
| ATGCGAAGAAAGGACTGTAA+TGG | - | chr4_1:19277377-19277396 | Msa0539060:intron | 40.0% | |
| GGGCTGTAAAGACAAAATCA+TGG | - | chr4_1:19277450-19277469 | Msa0539060:intron | 40.0% | |
| GAAGATGAACAACGCTACTT+TGG | - | chr4_1:19277767-19277786 | Msa0539060:intron | 40.0% | |
| ! | GAAGTTGAGTTGTTAGTTGG+TGG | + | chr4_1:19277816-19277835 | None:intergenic | 40.0% |
| ACTTCAGTACCTTCAACTGA+AGG | - | chr4_1:19277831-19277850 | Msa0539060:intron | 40.0% | |
| TCATGAGATCCTTCAGTTGA+AGG | + | chr4_1:19277843-19277862 | None:intergenic | 40.0% | |
| CAACTGAAGGATCTCATGAT+AGG | - | chr4_1:19277844-19277863 | Msa0539060:intron | 40.0% | |
| AGAACTCATGAGCATCTTAC+GGG | + | chr4_1:19277902-19277921 | None:intergenic | 40.0% | |
| AATATCACGGGTCACAGTTT+GGG | + | chr4_1:19278033-19278052 | None:intergenic | 40.0% | |
| TAATATCACGGGTCACAGTT+TGG | + | chr4_1:19278034-19278053 | None:intergenic | 40.0% | |
| TAATCTTTCCACTTCTCAGC+TGG | + | chr4_1:19278086-19278105 | None:intergenic | 40.0% | |
| GTAATATGTCAAGAACCGTG+TGG | - | chr4_1:19278254-19278273 | Msa0539060:intron | 40.0% | |
| GTGAATTTGGTTGACACCAA+GGG | - | chr4_1:19278352-19278371 | Msa0539060:intron | 40.0% | |
| ACTTCTGCCTTCATTCCTTT+GGG | + | chr4_1:19278385-19278404 | None:intergenic | 40.0% | |
| TACTTCTGCCTTCATTCCTT+TGG | + | chr4_1:19278386-19278405 | None:intergenic | 40.0% | |
| AAGGAATGAAGGCAGAAGTA+TGG | - | chr4_1:19278386-19278405 | Msa0539060:intron | 40.0% | |
| ! | AGGAATGAAGGCAGAAGTAT+GGG | - | chr4_1:19278387-19278406 | Msa0539060:intron | 40.0% |
| ACATTTGGTTGAAACCAGAG+TGG | - | chr4_1:19278422-19278441 | Msa0539060:intron | 40.0% | |
| ACAGGAGGCTCTATAAACTT+TGG | - | chr4_1:19278505-19278524 | Msa0539060:intron | 40.0% | |
| ! | ATCTCCATACTTTTCCAGCA+TGG | + | chr4_1:19278819-19278838 | None:intergenic | 40.0% |
| CACAAGTTAGAATCAACTGC+CGG | + | chr4_1:19278857-19278876 | None:intergenic | 40.0% | |
| ! | GGCAGTTGATTCTAACTTGT+GGG | - | chr4_1:19278856-19278875 | Msa0539060:intron | 40.0% |
| CAAATGTCTGTCTCGTCTTA+TGG | + | chr4_1:19278898-19278917 | None:intergenic | 40.0% | |
| TAAGACGAGACAGACATTTG+TGG | - | chr4_1:19278898-19278917 | Msa0539060:intron | 40.0% | |
| AAGACGAGACAGACATTTGT+GGG | - | chr4_1:19278899-19278918 | Msa0539060:intron | 40.0% | |
| GATGTAGCTAAGATGTTGGA+AGG | + | chr4_1:19278980-19278999 | None:intergenic | 40.0% | |
| GCGGAATCGAAGAATCGATT+TGG | + | chr4_1:19275464-19275483 | None:intergenic | 45.0% | |
| ! | AATCGATTCTTCGATTCCGC+CGG | - | chr4_1:19275464-19275483 | Msa0539060:CDS | 45.0% |
| CAGCAAGACACTATGCCAAA+TGG | - | chr4_1:19276501-19276520 | Msa0539060:CDS | 45.0% | |
| CTCTTTGAGTGAGAGAATCC+TGG | - | chr4_1:19276788-19276807 | Msa0539060:CDS | 45.0% | |
| AACCTGTCAATCTGGGGATA+AGG | - | chr4_1:19276954-19276973 | Msa0539060:intron | 45.0% | |
| GCAGGGACAAGCAAAATTTG+TGG | + | chr4_1:19276987-19277006 | None:intergenic | 45.0% | |
| ! | GTAAAGACACCAGAAGTGCA+GGG | + | chr4_1:19277004-19277023 | None:intergenic | 45.0% |
| ! | TGTAAAGACACCAGAAGTGC+AGG | + | chr4_1:19277005-19277024 | None:intergenic | 45.0% |
| ! | CAGAACAAATCCGGGTTTTC+TGG | + | chr4_1:19277077-19277096 | None:intergenic | 45.0% |
| TTATGAAACCCGATCGGAGT+TGG | - | chr4_1:19277351-19277370 | Msa0539060:intron | 45.0% | |
| GAGTTGGATGATGCGAAGAA+AGG | - | chr4_1:19277367-19277386 | Msa0539060:intron | 45.0% | |
| ! | AGACAAAATCATGGACTGCC+TGG | - | chr4_1:19277459-19277478 | Msa0539060:intron | 45.0% |
| ! | GACAAAATCATGGACTGCCT+GGG | - | chr4_1:19277460-19277479 | Msa0539060:intron | 45.0% |
| ! | ACAAAATCATGGACTGCCTG+GGG | - | chr4_1:19277461-19277480 | Msa0539060:intron | 45.0% |
| ! | AATGCAACAAAAGGTACGGC+AGG | - | chr4_1:19277720-19277739 | Msa0539060:intron | 45.0% |
| ! | AAAGGTACGGCAGGAAGTTT+AGG | - | chr4_1:19277729-19277748 | Msa0539060:intron | 45.0% |
| ! | CTACTTTGGGTTCTTTCCCA+CGG | - | chr4_1:19277781-19277800 | Msa0539060:intron | 45.0% |
| ! | CAAACTTGTTTCCCACTTGC+AGG | - | chr4_1:19277994-19278013 | Msa0539060:intron | 45.0% |
| ATATCACGGGTCACAGTTTG+GGG | + | chr4_1:19278032-19278051 | None:intergenic | 45.0% | |
| CATGCATGTTCTTTCCCACA+CGG | + | chr4_1:19278272-19278291 | None:intergenic | 45.0% | |
| GGCCTTACGAGAAGTTAACT+CGG | - | chr4_1:19278330-19278349 | Msa0539060:intron | 45.0% | |
| CACCGAGTTAACTTCTCGTA+AGG | + | chr4_1:19278335-19278354 | None:intergenic | 45.0% | |
| GGTGAATTTGGTTGACACCA+AGG | - | chr4_1:19278351-19278370 | Msa0539060:intron | 45.0% | |
| TCATGCACCCAAAGGAATGA+AGG | - | chr4_1:19278375-19278394 | Msa0539060:intron | 45.0% | |
| ! | ATGAAGGCAGAAGTATGGGA+TGG | - | chr4_1:19278391-19278410 | Msa0539060:intron | 45.0% |
| TCAGACTTCTTCTTCCACTC+TGG | + | chr4_1:19278439-19278458 | None:intergenic | 45.0% | |
| ACTGCCATGCTGGAAAAGTA+TGG | - | chr4_1:19278812-19278831 | Msa0539060:intron | 45.0% | |
| ! | CGGCAGTTGATTCTAACTTG+TGG | - | chr4_1:19278855-19278874 | Msa0539060:intron | 45.0% |
| GCTTCATCTGCAGAGTTTAC+TGG | - | chr4_1:19278953-19278972 | Msa0539060:intron | 45.0% | |
| ! | TTGCATTGGTGCTTTGTGCA+TGG | + | chr4_1:19279101-19279120 | None:intergenic | 45.0% |
| ! | ATGCACAAAGCACCAATGCA+AGG | - | chr4_1:19279100-19279119 | Msa0539060:CDS | 45.0% |
| TCAGCGAATTCACCTTGCAT+TGG | + | chr4_1:19279115-19279134 | None:intergenic | 45.0% | |
| ATGCAAGGTGAATTCGCTGA+AGG | - | chr4_1:19279115-19279134 | Msa0539060:CDS | 45.0% | |
| TGAATTCGCTGAAGGTCACA+TGG | - | chr4_1:19279123-19279142 | Msa0539060:CDS | 45.0% | |
| CGTGGATTCTGGTGAGTTTC+CGG | + | chr4_1:19275486-19275505 | None:intergenic | 50.0% | |
| AAACTCACCAGAATCCACGC+CGG | - | chr4_1:19275487-19275506 | Msa0539060:CDS | 50.0% | |
| TGCCTTATCCCCAGATTGAC+AGG | + | chr4_1:19276959-19276978 | None:intergenic | 50.0% | |
| TTTGCTTGTCCCTGCACTTC+TGG | - | chr4_1:19276992-19277011 | Msa0539060:CDS | 50.0% | |
| TCGCATCATCCAACTCCGAT+CGG | + | chr4_1:19277363-19277382 | None:intergenic | 50.0% | |
| GCATAACATTCATCAGCCCC+AGG | + | chr4_1:19277480-19277499 | None:intergenic | 50.0% | |
| ! | TTGGTGGATCAGTAGACCGT+GGG | + | chr4_1:19277800-19277819 | None:intergenic | 50.0% |
| ACTTGTTTCCCACTTGCAGG+AGG | - | chr4_1:19277997-19278016 | Msa0539060:intron | 50.0% | |
| ACAAACCTCCTCCTGCAAGT+GGG | + | chr4_1:19278008-19278027 | None:intergenic | 50.0% | |
| AACAAACCTCCTCCTGCAAG+TGG | + | chr4_1:19278009-19278028 | None:intergenic | 50.0% | |
| TTCCACTTCTCAGCTGGAGT+AGG | + | chr4_1:19278080-19278099 | None:intergenic | 50.0% | |
| CGTGTGGGAAAGAACATGCA+TGG | - | chr4_1:19278270-19278289 | Msa0539060:intron | 50.0% | |
| GTGCAACACTGCATCAGGTA+AGG | + | chr4_1:19278485-19278504 | None:intergenic | 50.0% | |
| GACATATGACACTGCCATGC+TGG | - | chr4_1:19278802-19278821 | Msa0539060:intron | 50.0% | |
| AGAATCAACTGCCGGATGAG+TGG | + | chr4_1:19278849-19278868 | None:intergenic | 50.0% | |
| AAGCTGACACAAACCCACCA+AGG | + | chr4_1:19278937-19278956 | None:intergenic | 50.0% | |
| CTGAAGGTCACATGGATGCT+AGG | - | chr4_1:19279131-19279150 | Msa0539060:CDS | 50.0% | |
| GGATTCTGGTGAGTTTCCGG+CGG | + | chr4_1:19275483-19275502 | None:intergenic | 55.0% | |
| TGAAAGAGGAGTTTCCGGCG+TGG | + | chr4_1:19275504-19275523 | None:intergenic | 55.0% | |
| CGCATCATCCAACTCCGATC+GGG | + | chr4_1:19277362-19277381 | None:intergenic | 55.0% | |
| ! | GTTGGTGGATCAGTAGACCG+TGG | + | chr4_1:19277801-19277820 | None:intergenic | 55.0% |
| TGTTTCCCACTTGCAGGAGG+AGG | - | chr4_1:19278000-19278019 | Msa0539060:intron | 55.0% | |
| TGCCTACTCCAGCTGAGAAG+TGG | - | chr4_1:19278075-19278094 | Msa0539060:intron | 55.0% | |
| ACCAAGGGTCATGCACCCAA+AGG | - | chr4_1:19278367-19278386 | Msa0539060:intron | 55.0% | |
| TCCTTTGGGTGCATGACCCT+TGG | + | chr4_1:19278371-19278390 | None:intergenic | 55.0% | |
| ! | GGCAGAAGTATGGGATGGCT+TGG | - | chr4_1:19278396-19278415 | Msa0539060:intron | 55.0% |
| !! | GGGATGGCTTGGTCGACATT+TGG | - | chr4_1:19278407-19278426 | Msa0539060:intron | 55.0% |
| CCTGTGTGCAACACTGCATC+AGG | + | chr4_1:19278490-19278509 | None:intergenic | 55.0% | |
| CCTGATGCAGTGTTGCACAC+AGG | - | chr4_1:19278487-19278506 | Msa0539060:intron | 55.0% | |
| GATGCAGTGTTGCACACAGG+AGG | - | chr4_1:19278490-19278509 | Msa0539060:intron | 55.0% | |
| GTCGCAGCTTAGACCTTGGT+GGG | - | chr4_1:19278921-19278940 | Msa0539060:intron | 55.0% | |
| GGAGTTTCCGGCGTGGATTC+TGG | + | chr4_1:19275497-19275516 | None:intergenic | 60.0% | |
| GTGGGTCGCAGCTTAGACCT+TGG | - | chr4_1:19278917-19278936 | Msa0539060:intron | 60.0% | |
| GGTCGCAGCTTAGACCTTGG+TGG | - | chr4_1:19278920-19278939 | Msa0539060:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 19275395 | 19279156 | 19275395 | ID=Msa0539060;Name=Msa0539060 |
| chr4_1 | mRNA | 19275395 | 19279156 | 19275395 | ID=Msa0539060-mRNA-1;Parent=Msa0539060;Name=Msa0539060-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0.33|0.28|0.85|1|1|7|0|461 |
| chr4_1 | exon | 19279005 | 19279156 | 19279005 | ID=Msa0539060-mRNA-1:exon:5655;Parent=Msa0539060-mRNA-1 |
| chr4_1 | exon | 19276966 | 19277090 | 19276966 | ID=Msa0539060-mRNA-1:exon:5654;Parent=Msa0539060-mRNA-1 |
| chr4_1 | exon | 19276650 | 19276845 | 19276650 | ID=Msa0539060-mRNA-1:exon:5653;Parent=Msa0539060-mRNA-1 |
| chr4_1 | exon | 19276406 | 19276535 | 19276406 | ID=Msa0539060-mRNA-1:exon:5652;Parent=Msa0539060-mRNA-1 |
| chr4_1 | exon | 19276005 | 19276328 | 19276005 | ID=Msa0539060-mRNA-1:exon:5651;Parent=Msa0539060-mRNA-1 |
| chr4_1 | exon | 19275836 | 19275937 | 19275836 | ID=Msa0539060-mRNA-1:exon:5650;Parent=Msa0539060-mRNA-1 |
| chr4_1 | exon | 19275395 | 19275751 | 19275395 | ID=Msa0539060-mRNA-1:exon:5649;Parent=Msa0539060-mRNA-1 |
| chr4_1 | CDS | 19279005 | 19279156 | 19279005 | ID=Msa0539060-mRNA-1:cds;Parent=Msa0539060-mRNA-1 |
| chr4_1 | CDS | 19276966 | 19277090 | 19276966 | ID=Msa0539060-mRNA-1:cds;Parent=Msa0539060-mRNA-1 |
| chr4_1 | CDS | 19276650 | 19276845 | 19276650 | ID=Msa0539060-mRNA-1:cds;Parent=Msa0539060-mRNA-1 |
| chr4_1 | CDS | 19276406 | 19276535 | 19276406 | ID=Msa0539060-mRNA-1:cds;Parent=Msa0539060-mRNA-1 |
| chr4_1 | CDS | 19276005 | 19276328 | 19276005 | ID=Msa0539060-mRNA-1:cds;Parent=Msa0539060-mRNA-1 |
| chr4_1 | CDS | 19275836 | 19275937 | 19275836 | ID=Msa0539060-mRNA-1:cds;Parent=Msa0539060-mRNA-1 |
| chr4_1 | CDS | 19275395 | 19275751 | 19275395 | ID=Msa0539060-mRNA-1:cds;Parent=Msa0539060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
