Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1373350 | XP_003592814.1 | 94.301 | 544 | 14 | 7 | 1 | 530 | 1 | 541 | 0.0 | 890 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1373350 | G7IAX9 | 94.301 | 544 | 14 | 7 | 1 | 530 | 1 | 541 | 0.0 | 890 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003560 | Msa1373350 | 0.815236 | 1.024966e-51 | -8.615850e-47 |
Msa0005270 | Msa1373350 | 0.805052 | 1.608036e-49 | -8.615850e-47 |
Msa0026870 | Msa1373350 | 0.809194 | 2.134962e-50 | -8.615850e-47 |
Msa0029850 | Msa1373350 | 0.830917 | 2.241982e-55 | -8.615850e-47 |
Msa0034400 | Msa1373350 | 0.822645 | 2.120883e-53 | -8.615850e-47 |
Msa0038020 | Msa1373350 | 0.819034 | 1.435676e-52 | -8.615850e-47 |
Msa0052030 | Msa1373350 | 0.826432 | 2.722137e-54 | -8.615850e-47 |
Msa0076700 | Msa1373350 | 0.828823 | 7.254599e-55 | -8.615850e-47 |
Msa0077180 | Msa1373350 | 0.822189 | 2.706579e-53 | -8.615850e-47 |
Msa0077450 | Msa1373350 | 0.802542 | 5.339050e-49 | -8.615850e-47 |
Msa0078060 | Msa1373350 | 0.802735 | 4.872060e-49 | -8.615850e-47 |
Msa0078420 | Msa1373350 | 0.800493 | 1.404361e-48 | -8.615850e-47 |
Msa0083090 | Msa1373350 | 0.812662 | 3.787252e-51 | -8.615850e-47 |
Msa0084430 | Msa1373350 | 0.842942 | 1.899909e-58 | -8.615850e-47 |
Msa0085720 | Msa1373350 | 0.868331 | 7.069558e-66 | -8.615850e-47 |
Msa0092440 | Msa1373350 | 0.850274 | 1.887237e-60 | -8.615850e-47 |
Msa0102120 | Msa1373350 | 0.832003 | 1.211338e-55 | -8.615850e-47 |
Msa0117770 | Msa1373350 | 0.804613 | 1.986285e-49 | -8.615850e-47 |
Msa0119320 | Msa1373350 | 0.804549 | 2.048397e-49 | -8.615850e-47 |
Msa0120340 | Msa1373350 | 0.800698 | 1.275476e-48 | -8.615850e-47 |
Msa1348600 | Msa1373350 | 0.800924 | 1.147091e-48 | -8.615850e-47 |
Msa1350690 | Msa1373350 | 0.808926 | 2.436506e-50 | -8.615850e-47 |
Msa1359920 | Msa1373350 | 0.821855 | 3.234114e-53 | -8.615850e-47 |
Msa1360240 | Msa1373350 | 0.808224 | 3.440607e-50 | -8.615850e-47 |
Msa1364370 | Msa1373350 | 0.837380 | 5.379341e-57 | -8.615850e-47 |
Msa1369000 | Msa1373350 | 0.803173 | 3.954884e-49 | -8.615850e-47 |
Msa1372290 | Msa1373350 | 0.803761 | 2.986906e-49 | -8.615850e-47 |
Msa1373350 | Msa1376930 | 0.815114 | 1.091054e-51 | -8.615850e-47 |
Msa1373350 | Msa1378230 | 0.836823 | 7.463400e-57 | -8.615850e-47 |
Msa1373350 | Msa1379850 | 0.805861 | 1.088049e-49 | -8.615850e-47 |
Msa1373350 | Msa1393040 | 0.850185 | 1.999373e-60 | -8.615850e-47 |
Msa1373350 | Msa1397260 | 0.809653 | 1.701096e-50 | -8.615850e-47 |
Msa1373350 | Msa1400070 | 0.828827 | 7.239342e-55 | -8.615850e-47 |
Msa1373350 | Msa1401140 | 0.807754 | 4.330969e-50 | -8.615850e-47 |
Msa1373350 | Msa1401460 | 0.805336 | 1.402358e-49 | -8.615850e-47 |
Msa1373350 | Msa1404240 | -0.800657 | 1.300467e-48 | -8.615850e-47 |
Msa1373350 | Msa1407600 | 0.812340 | 4.453008e-51 | -8.615850e-47 |
Msa1373350 | Msa1407650 | 0.832506 | 9.092700e-56 | -8.615850e-47 |
Msa1373350 | Msa1417810 | -0.801522 | 8.653315e-49 | -8.615850e-47 |
Msa1373350 | Msa1422840 | 0.834469 | 2.943356e-56 | -8.615850e-47 |
Msa1373350 | Msa1423820 | 0.810658 | 1.033271e-50 | -8.615850e-47 |
Msa1373350 | Msa1426570 | 0.830258 | 3.249865e-55 | -8.615850e-47 |
Msa1373350 | Msa1433220 | 0.821344 | 4.245458e-53 | -8.615850e-47 |
Msa1373350 | Msa1435400 | 0.819014 | 1.450907e-52 | -8.615850e-47 |
Msa1373350 | Msa1437130 | 0.814124 | 1.807090e-51 | -8.615850e-47 |
Msa1373350 | Msa1444250 | -0.826235 | 3.031769e-54 | -8.615850e-47 |
Msa1373350 | Msa1445030 | 0.856992 | 2.209821e-62 | -8.615850e-47 |
Msa1373350 | Msa1445220 | 0.825748 | 3.958294e-54 | -8.615850e-47 |
Msa1373350 | Msa1445400 | -0.801938 | 7.110325e-49 | -8.615850e-47 |
Msa1373350 | Msa1447150 | 0.810535 | 1.098453e-50 | -8.615850e-47 |
Msa1373350 | Msa1449350 | -0.814689 | 1.355966e-51 | -8.615850e-47 |
Msa1373350 | Msa1451620 | -0.842116 | 3.147459e-58 | -8.615850e-47 |
Msa1373350 | Msa1459050 | 0.804161 | 2.467355e-49 | -8.615850e-47 |
Msa1373350 | Msa1461810 | -0.810030 | 1.411625e-50 | -8.615850e-47 |
Msa0610670 | Msa1373350 | 0.807686 | 4.477679e-50 | -8.615850e-47 |
Msa0612680 | Msa1373350 | -0.823323 | 1.473218e-53 | -8.615850e-47 |
Msa0613460 | Msa1373350 | 0.821679 | 3.551965e-53 | -8.615850e-47 |
Msa0615340 | Msa1373350 | 0.804232 | 2.384774e-49 | -8.615850e-47 |
Msa0618360 | Msa1373350 | 0.802490 | 5.473629e-49 | -8.615850e-47 |
Msa0622600 | Msa1373350 | 0.823573 | 1.288144e-53 | -8.615850e-47 |
Msa0624230 | Msa1373350 | 0.826077 | 3.306762e-54 | -8.615850e-47 |
Msa0625120 | Msa1373350 | 0.814311 | 1.643744e-51 | -8.615850e-47 |
Msa0625840 | Msa1373350 | -0.820736 | 5.857669e-53 | -8.615850e-47 |
Msa0626220 | Msa1373350 | 0.809553 | 1.787363e-50 | -8.615850e-47 |
Msa0626990 | Msa1373350 | 0.866506 | 2.713843e-65 | -8.615850e-47 |
Msa0627350 | Msa1373350 | 0.870797 | 1.112378e-66 | -8.615850e-47 |
Msa0651270 | Msa1373350 | 0.826870 | 2.139836e-54 | -8.615850e-47 |
Msa0653320 | Msa1373350 | -0.820219 | 7.700432e-53 | -8.615850e-47 |
Msa0679550 | Msa1373350 | 0.868439 | 6.523392e-66 | -8.615850e-47 |
Msa0688070 | Msa1373350 | 0.812152 | 4.894989e-51 | -8.615850e-47 |
Msa0698440 | Msa1373350 | 0.804069 | 2.578456e-49 | -8.615850e-47 |
Msa0711130 | Msa1373350 | 0.815653 | 8.278596e-52 | -8.615850e-47 |
Msa0724560 | Msa1373350 | 0.808314 | 3.290837e-50 | -8.615850e-47 |
Msa0724950 | Msa1373350 | 0.839918 | 1.188588e-57 | -8.615850e-47 |
Msa0731180 | Msa1373350 | 0.830109 | 3.533391e-55 | -8.615850e-47 |
Msa0732600 | Msa1373350 | 0.812646 | 3.818930e-51 | -8.615850e-47 |
Msa0744170 | Msa1373350 | -0.806639 | 7.459236e-50 | -8.615850e-47 |
Msa0750950 | Msa1373350 | 0.812410 | 4.299250e-51 | -8.615850e-47 |
Msa0751210 | Msa1373350 | 0.842495 | 2.497620e-58 | -8.615850e-47 |
Msa0754920 | Msa1373350 | 0.834563 | 2.788541e-56 | -8.615850e-47 |
Msa0757050 | Msa1373350 | 0.803872 | 2.833591e-49 | -8.615850e-47 |
Msa0758580 | Msa1373350 | 0.810460 | 1.140372e-50 | -8.615850e-47 |
Msa0761890 | Msa1373350 | 0.805150 | 1.534096e-49 | -8.615850e-47 |
Msa0763080 | Msa1373350 | 0.840332 | 9.266175e-58 | -8.615850e-47 |
Msa0767080 | Msa1373350 | 0.818037 | 2.415400e-52 | -8.615850e-47 |
Msa0771580 | Msa1373350 | 0.817350 | 3.451661e-52 | -8.615850e-47 |
Msa0773310 | Msa1373350 | 0.825753 | 3.946856e-54 | -8.615850e-47 |
Msa0780280 | Msa1373350 | 0.810152 | 1.328611e-50 | -8.615850e-47 |
Msa0794320 | Msa1373350 | 0.830152 | 3.450044e-55 | -8.615850e-47 |
Msa0799060 | Msa1373350 | 0.815822 | 7.591072e-52 | -8.615850e-47 |
Msa0801740 | Msa1373350 | 0.809699 | 1.663376e-50 | -8.615850e-47 |
Msa0805420 | Msa1373350 | 0.812296 | 4.553126e-51 | -8.615850e-47 |
Msa0818110 | Msa1373350 | 0.820974 | 5.165552e-53 | -8.615850e-47 |
Msa0821800 | Msa1373350 | 0.807798 | 4.238718e-50 | -8.615850e-47 |
Msa0827470 | Msa1373350 | 0.840191 | 1.008849e-57 | -8.615850e-47 |
Msa0831150 | Msa1373350 | 0.843829 | 1.101667e-58 | -8.615850e-47 |
Msa0831590 | Msa1373350 | 0.818327 | 2.076851e-52 | -8.615850e-47 |
Msa0835730 | Msa1373350 | 0.811920 | 5.498742e-51 | -8.615850e-47 |
Msa0124550 | Msa1373350 | 0.840306 | 9.414813e-58 | -8.615850e-47 |
Msa0125050 | Msa1373350 | 0.806548 | 7.796246e-50 | -8.615850e-47 |
Msa0126230 | Msa1373350 | 0.803058 | 4.177274e-49 | -8.615850e-47 |
Msa0130520 | Msa1373350 | 0.811047 | 8.509006e-51 | -8.615850e-47 |
Msa0140450 | Msa1373350 | 0.800342 | 1.507521e-48 | -8.615850e-47 |
Msa0140510 | Msa1373350 | -0.807762 | 4.315164e-50 | -8.615850e-47 |
Msa0144790 | Msa1373350 | 0.811520 | 6.720408e-51 | -8.615850e-47 |
Msa0163780 | Msa1373350 | 0.803109 | 4.077768e-49 | -8.615850e-47 |
Msa0167850 | Msa1373350 | 0.803895 | 2.802156e-49 | -8.615850e-47 |
Msa0169820 | Msa1373350 | 0.837284 | 5.690385e-57 | -8.615850e-47 |
Msa0174850 | Msa1373350 | 0.807421 | 5.095558e-50 | -8.615850e-47 |
Msa0175050 | Msa1373350 | 0.871745 | 5.405820e-67 | -8.615850e-47 |
Msa0175420 | Msa1373350 | 0.822404 | 2.412304e-53 | -8.615850e-47 |
Msa0183010 | Msa1373350 | -0.843730 | 1.170432e-58 | -8.615850e-47 |
Msa0184190 | Msa1373350 | 0.807445 | 5.036352e-50 | -8.615850e-47 |
Msa0187060 | Msa1373350 | 0.847496 | 1.114644e-59 | -8.615850e-47 |
Msa0193540 | Msa1373350 | 0.806505 | 7.964061e-50 | -8.615850e-47 |
Msa0194010 | Msa1373350 | 0.811073 | 8.402729e-51 | -8.615850e-47 |
Msa0195330 | Msa1373350 | 0.801420 | 9.080026e-49 | -8.615850e-47 |
Msa0199800 | Msa1373350 | -0.856945 | 2.282781e-62 | -8.615850e-47 |
Msa0200560 | Msa1373350 | 0.820973 | 5.167255e-53 | -8.615850e-47 |
Msa0219240 | Msa1373350 | 0.806928 | 6.482637e-50 | -8.615850e-47 |
Msa0222550 | Msa1373350 | 0.810710 | 1.006801e-50 | -8.615850e-47 |
Msa0223910 | Msa1373350 | 0.804559 | 2.038509e-49 | -8.615850e-47 |
Msa0227230 | Msa1373350 | 0.834965 | 2.209424e-56 | -8.615850e-47 |
Msa0230640 | Msa1373350 | -0.827524 | 1.492139e-54 | -8.615850e-47 |
Msa0231240 | Msa1373350 | 0.803536 | 3.326588e-49 | -8.615850e-47 |
Msa0232340 | Msa1373350 | 0.817215 | 3.701536e-52 | -8.615850e-47 |
Msa0235880 | Msa1373350 | 0.822889 | 1.860530e-53 | -8.615850e-47 |
Msa1224580 | Msa1373350 | -0.858306 | 9.018575e-63 | -8.615850e-47 |
Msa1227330 | Msa1373350 | 0.805057 | 1.603731e-49 | -8.615850e-47 |
Msa1228160 | Msa1373350 | -0.803625 | 3.187514e-49 | -8.615850e-47 |
Msa1229610 | Msa1373350 | 0.848429 | 6.162806e-60 | -8.615850e-47 |
Msa1230830 | Msa1373350 | 0.845345 | 4.303589e-59 | -8.615850e-47 |
Msa1235400 | Msa1373350 | 0.907009 | 8.044078e-81 | -8.615850e-47 |
Msa1241570 | Msa1373350 | 0.824192 | 9.219173e-54 | -8.615850e-47 |
Msa1258380 | Msa1373350 | -0.812981 | 3.225100e-51 | -8.615850e-47 |
Msa1263290 | Msa1373350 | -0.869612 | 2.717198e-66 | -8.615850e-47 |
Msa1264860 | Msa1373350 | -0.823265 | 1.519844e-53 | -8.615850e-47 |
Msa1270660 | Msa1373350 | 0.821661 | 3.585288e-53 | -8.615850e-47 |
Msa1270730 | Msa1373350 | 0.817298 | 3.545272e-52 | -8.615850e-47 |
Msa1272320 | Msa1373350 | 0.838640 | 2.550903e-57 | -8.615850e-47 |
Msa1276510 | Msa1373350 | 0.855033 | 8.276421e-62 | -8.615850e-47 |
Msa1305350 | Msa1373350 | 0.814979 | 1.168846e-51 | -8.615850e-47 |
Msa1306750 | Msa1373350 | 0.822585 | 2.189192e-53 | -8.615850e-47 |
Msa1307740 | Msa1373350 | 0.844136 | 9.111663e-59 | -8.615850e-47 |
Msa1310220 | Msa1373350 | 0.835677 | 1.459588e-56 | -8.615850e-47 |
Msa1314770 | Msa1373350 | 0.909994 | 3.073497e-82 | -8.615850e-47 |
Msa1322200 | Msa1373350 | 0.814191 | 1.747196e-51 | -8.615850e-47 |
Msa1333420 | Msa1373350 | 0.807800 | 4.234982e-50 | -8.615850e-47 |
Msa1333730 | Msa1373350 | 0.829632 | 4.617866e-55 | -8.615850e-47 |
Msa1335230 | Msa1373350 | 0.812652 | 3.806734e-51 | -8.615850e-47 |
Msa1335710 | Msa1373350 | 0.845767 | 3.307249e-59 | -8.615850e-47 |
Msa1338250 | Msa1373350 | 0.847838 | 8.975400e-60 | -8.615850e-47 |
Msa1341490 | Msa1373350 | 0.821422 | 4.072897e-53 | -8.615850e-47 |
Msa1341810 | Msa1373350 | 0.834859 | 2.349425e-56 | -8.615850e-47 |
Msa0365490 | Msa1373350 | 0.872020 | 4.382179e-67 | -8.615850e-47 |
Msa0377440 | Msa1373350 | 0.868129 | 8.214867e-66 | -8.615850e-47 |
Msa0381600 | Msa1373350 | -0.810016 | 1.421357e-50 | -8.615850e-47 |
Msa0388030 | Msa1373350 | -0.834065 | 3.716941e-56 | -8.615850e-47 |
Msa0388220 | Msa1373350 | 0.809715 | 1.650052e-50 | -8.615850e-47 |
Msa0389810 | Msa1373350 | 0.840884 | 6.645884e-58 | -8.615850e-47 |
Msa0390960 | Msa1373350 | 0.864608 | 1.075584e-64 | -8.615850e-47 |
Msa0392040 | Msa1373350 | -0.816181 | 6.312578e-52 | -8.615850e-47 |
Msa0409200 | Msa1373350 | 0.806988 | 6.294550e-50 | -8.615850e-47 |
Msa0411310 | Msa1373350 | -0.826901 | 2.102829e-54 | -8.615850e-47 |
Msa0417650 | Msa1373350 | 0.843447 | 1.393785e-58 | -8.615850e-47 |
Msa0417730 | Msa1373350 | 0.841922 | 3.541949e-58 | -8.615850e-47 |
Msa0426900 | Msa1373350 | 0.815313 | 9.853992e-52 | -8.615850e-47 |
Msa0430870 | Msa1373350 | 0.823478 | 1.355375e-53 | -8.615850e-47 |
Msa0433410 | Msa1373350 | -0.810622 | 1.051971e-50 | -8.615850e-47 |
Msa0436370 | Msa1373350 | 0.805258 | 1.456184e-49 | -8.615850e-47 |
Msa0444090 | Msa1373350 | 0.821882 | 3.187702e-53 | -8.615850e-47 |
Msa0452810 | Msa1373350 | -0.801628 | 8.231723e-49 | -8.615850e-47 |
Msa0458440 | Msa1373350 | 0.862152 | 6.206042e-64 | -8.615850e-47 |
Msa0464900 | Msa1373350 | 0.843846 | 1.089755e-58 | -8.615850e-47 |
Msa0468130 | Msa1373350 | 0.834233 | 3.373983e-56 | -8.615850e-47 |
Msa0469940 | Msa1373350 | -0.833201 | 6.108880e-56 | -8.615850e-47 |
Msa0482190 | Msa1373350 | -0.814438 | 1.540689e-51 | -8.615850e-47 |
Msa0981310 | Msa1373350 | 0.866111 | 3.620241e-65 | -8.615850e-47 |
Msa0982240 | Msa1373350 | 0.808600 | 2.859565e-50 | -8.615850e-47 |
Msa0982270 | Msa1373350 | 0.838293 | 3.134795e-57 | -8.615850e-47 |
Msa1006850 | Msa1373350 | 0.802660 | 5.048941e-49 | -8.615850e-47 |
Msa1008750 | Msa1373350 | 0.813087 | 3.057350e-51 | -8.615850e-47 |
Msa1021510 | Msa1373350 | 0.826758 | 2.275636e-54 | -8.615850e-47 |
Msa1032170 | Msa1373350 | 0.804569 | 2.028712e-49 | -8.615850e-47 |
Msa1032440 | Msa1373350 | 0.822991 | 1.761415e-53 | -8.615850e-47 |
Msa1040520 | Msa1373350 | 0.806237 | 9.067374e-50 | -8.615850e-47 |
Msa1041600 | Msa1373350 | -0.807297 | 5.415356e-50 | -8.615850e-47 |
Msa1050740 | Msa1373350 | 0.818826 | 1.600406e-52 | -8.615850e-47 |
Msa1068200 | Msa1373350 | -0.831391 | 1.713864e-55 | -8.615850e-47 |
Msa1070840 | Msa1373350 | 0.815516 | 8.882323e-52 | -8.615850e-47 |
Msa1075080 | Msa1373350 | -0.842481 | 2.518845e-58 | -8.615850e-47 |
Msa1077070 | Msa1373350 | 0.822233 | 2.643593e-53 | -8.615850e-47 |
Msa1092090 | Msa1373350 | 0.824101 | 9.686811e-54 | -8.615850e-47 |
Msa1096060 | Msa1373350 | 0.814583 | 1.431106e-51 | -8.615850e-47 |
Msa1105190 | Msa1373350 | 0.814643 | 1.387493e-51 | -8.615850e-47 |
Msa1105500 | Msa1373350 | 0.811928 | 5.477940e-51 | -8.615850e-47 |
Msa0245940 | Msa1373350 | 0.805636 | 1.213384e-49 | -8.615850e-47 |
Msa0249100 | Msa1373350 | 0.817014 | 4.107709e-52 | -8.615850e-47 |
Msa0250670 | Msa1373350 | 0.823210 | 1.565806e-53 | -8.615850e-47 |
Msa0265150 | Msa1373350 | 0.843444 | 1.395632e-58 | -8.615850e-47 |
Msa0266210 | Msa1373350 | 0.800948 | 1.134174e-48 | -8.615850e-47 |
Msa0266240 | Msa1373350 | 0.824450 | 8.018266e-54 | -8.615850e-47 |
Msa0269520 | Msa1373350 | 0.840622 | 7.782586e-58 | -8.615850e-47 |
Msa0271580 | Msa1373350 | 0.818614 | 1.788157e-52 | -8.615850e-47 |
Msa0271650 | Msa1373350 | 0.813588 | 2.372913e-51 | -8.615850e-47 |
Msa0271790 | Msa1373350 | 0.804850 | 1.772462e-49 | -8.615850e-47 |
Msa0274630 | Msa1373350 | 0.805853 | 1.092035e-49 | -8.615850e-47 |
Msa0278900 | Msa1373350 | 0.818767 | 1.650950e-52 | -8.615850e-47 |
Msa0284520 | Msa1373350 | 0.802282 | 6.041925e-49 | -8.615850e-47 |
Msa0287670 | Msa1373350 | 0.806916 | 6.518603e-50 | -8.615850e-47 |
Msa0289400 | Msa1373350 | 0.810472 | 1.133399e-50 | -8.615850e-47 |
Msa0300150 | Msa1373350 | 0.815859 | 7.450654e-52 | -8.615850e-47 |
Msa0301810 | Msa1373350 | 0.826265 | 2.981962e-54 | -8.615850e-47 |
Msa0314060 | Msa1373350 | 0.803593 | 3.237763e-49 | -8.615850e-47 |
Msa0320800 | Msa1373350 | 0.819492 | 1.128861e-52 | -8.615850e-47 |
Msa0337060 | Msa1373350 | 0.800982 | 1.116381e-48 | -8.615850e-47 |
Msa0344690 | Msa1373350 | -0.824987 | 5.991564e-54 | -8.615850e-47 |
Msa0350320 | Msa1373350 | -0.804901 | 1.728965e-49 | -8.615850e-47 |
Msa1109820 | Msa1373350 | 0.854092 | 1.549415e-61 | -8.615850e-47 |
Msa1118110 | Msa1373350 | 0.829862 | 4.058204e-55 | -8.615850e-47 |
Msa1118760 | Msa1373350 | 0.817000 | 4.137976e-52 | -8.615850e-47 |
Msa1122780 | Msa1373350 | 0.805896 | 1.069637e-49 | -8.615850e-47 |
Msa1124540 | Msa1373350 | -0.822464 | 2.335544e-53 | -8.615850e-47 |
Msa1130530 | Msa1373350 | 0.827433 | 1.568781e-54 | -8.615850e-47 |
Msa1132390 | Msa1373350 | 0.803132 | 4.033973e-49 | -8.615850e-47 |
Msa1132970 | Msa1373350 | 0.800513 | 1.391145e-48 | -8.615850e-47 |
Msa1133570 | Msa1373350 | 0.832800 | 7.689174e-56 | -8.615850e-47 |
Msa1144720 | Msa1373350 | -0.826919 | 2.082522e-54 | -8.615850e-47 |
Msa1152950 | Msa1373350 | 0.831676 | 1.458377e-55 | -8.615850e-47 |
Msa1156170 | Msa1373350 | -0.800278 | 1.553598e-48 | -8.615850e-47 |
Msa1156340 | Msa1373350 | -0.831788 | 1.368440e-55 | -8.615850e-47 |
Msa1158660 | Msa1373350 | 0.803476 | 3.423989e-49 | -8.615850e-47 |
Msa1166500 | Msa1373350 | -0.805662 | 1.197972e-49 | -8.615850e-47 |
Msa1174310 | Msa1373350 | 0.914867 | 1.157155e-84 | -8.615850e-47 |
Msa1176270 | Msa1373350 | 0.803443 | 3.476891e-49 | -8.615850e-47 |
Msa1177780 | Msa1373350 | 0.800595 | 1.338704e-48 | -8.615850e-47 |
Msa1183100 | Msa1373350 | -0.806882 | 6.627336e-50 | -8.615850e-47 |
Msa1199070 | Msa1373350 | 0.802308 | 5.966643e-49 | -8.615850e-47 |
Msa1202750 | Msa1373350 | 0.800347 | 1.503964e-48 | -8.615850e-47 |
Msa1202770 | Msa1373350 | -0.804824 | 1.794070e-49 | -8.615850e-47 |
Msa1214880 | Msa1373350 | 0.834341 | 3.169853e-56 | -8.615850e-47 |
Msa1215070 | Msa1373350 | 0.804054 | 2.596916e-49 | -8.615850e-47 |
Msa1222280 | Msa1373350 | 0.850535 | 1.594588e-60 | -8.615850e-47 |
Msa1224480 | Msa1373350 | 0.811683 | 6.191569e-51 | -8.615850e-47 |
Msa0485500 | Msa1373350 | -0.808633 | 2.813882e-50 | -8.615850e-47 |
Msa0491500 | Msa1373350 | 0.841583 | 4.352631e-58 | -8.615850e-47 |
Msa0491520 | Msa1373350 | 0.846066 | 2.742213e-59 | -8.615850e-47 |
Msa0505060 | Msa1373350 | 0.808425 | 3.116554e-50 | -8.615850e-47 |
Msa0517650 | Msa1373350 | 0.863451 | 2.466502e-64 | -8.615850e-47 |
Msa0526670 | Msa1373350 | -0.801284 | 9.681463e-49 | -8.615850e-47 |
Msa0530650 | Msa1373350 | 0.866040 | 3.811001e-65 | -8.615850e-47 |
Msa0532810 | Msa1373350 | -0.812928 | 3.312353e-51 | -8.615850e-47 |
Msa0557950 | Msa1373350 | -0.813972 | 1.952631e-51 | -8.615850e-47 |
Msa0572480 | Msa1373350 | 0.801920 | 7.169883e-49 | -8.615850e-47 |
Msa0573040 | Msa1373350 | 0.842006 | 3.364648e-58 | -8.615850e-47 |
Msa0574850 | Msa1373350 | 0.820628 | 6.203158e-53 | -8.615850e-47 |
Msa0579100 | Msa1373350 | 0.804580 | 2.017652e-49 | -8.615850e-47 |
Msa0579130 | Msa1373350 | 0.815225 | 1.031050e-51 | -8.615850e-47 |
Msa0579200 | Msa1373350 | 0.812580 | 3.946668e-51 | -8.615850e-47 |
Msa0580000 | Msa1373350 | 0.813786 | 2.146354e-51 | -8.615850e-47 |
Msa0587190 | Msa1373350 | 0.870644 | 1.248426e-66 | -8.615850e-47 |
Msa0594790 | Msa1373350 | 0.810924 | 9.049271e-51 | -8.615850e-47 |
Msa0842770 | Msa1373350 | 0.808144 | 3.577166e-50 | -8.615850e-47 |
Msa0845070 | Msa1373350 | 0.845481 | 3.953654e-59 | -8.615850e-47 |
Msa0854920 | Msa1373350 | 0.803677 | 3.109837e-49 | -8.615850e-47 |
Msa0861830 | Msa1373350 | 0.808197 | 3.485544e-50 | -8.615850e-47 |
Msa0866400 | Msa1373350 | 0.813166 | 2.937608e-51 | -8.615850e-47 |
Msa0866410 | Msa1373350 | 0.812325 | 4.487588e-51 | -8.615850e-47 |
Msa0876850 | Msa1373350 | -0.807632 | 4.597854e-50 | -8.615850e-47 |
Msa0881160 | Msa1373350 | 0.821612 | 3.681090e-53 | -8.615850e-47 |
Msa0891600 | Msa1373350 | -0.821393 | 4.136087e-53 | -8.615850e-47 |
Msa0908170 | Msa1373350 | 0.822577 | 2.199257e-53 | -8.615850e-47 |
Msa0910980 | Msa1373350 | -0.805137 | 1.543581e-49 | -8.615850e-47 |
Msa0929920 | Msa1373350 | 0.810224 | 1.282099e-50 | -8.615850e-47 |
Msa0930820 | Msa1373350 | 0.811313 | 7.451616e-51 | -8.615850e-47 |
Msa0944730 | Msa1373350 | 0.801853 | 7.399850e-49 | -8.615850e-47 |
Msa0946690 | Msa1373350 | -0.815987 | 6.976089e-52 | -8.615850e-47 |
Msa0958030 | Msa1373350 | 0.801550 | 8.540880e-49 | -8.615850e-47 |
Msa0959010 | Msa1373350 | 0.804566 | 2.031124e-49 | -8.615850e-47 |
Msa0965020 | Msa1373350 | 0.807077 | 6.026879e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1373350 | MtrunA17_Chr1g0213411 | 89.706 | 544 | 11 | 8 | 1 | 530 | 1 | 513 | 0.0 | 826 |
Msa1373350 | MtrunA17_Chr6g0467951 | 94.309 | 123 | 6 | 1 | 409 | 530 | 17 | 139 | 9.59e-72 | 225 |
Msa1373350 | MtrunA17_Chr2g0308701 | 55.981 | 209 | 74 | 5 | 157 | 361 | 80 | 274 | 5.27e-67 | 218 |
Msa1373350 | MtrunA17_Chr2g0308691 | 56.284 | 183 | 67 | 5 | 159 | 337 | 81 | 254 | 8.31e-52 | 177 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1373350 | AT5G19900.3 | 50.988 | 506 | 161 | 21 | 1 | 463 | 1 | 462 | 9.96e-125 | 374 |
Msa1373350 | AT5G19900.2 | 50.988 | 506 | 161 | 21 | 1 | 463 | 1 | 462 | 9.96e-125 | 374 |
Msa1373350 | AT5G19900.4 | 50.988 | 506 | 161 | 21 | 1 | 463 | 1 | 462 | 9.96e-125 | 374 |
Msa1373350 | AT5G19900.5 | 50.988 | 506 | 161 | 21 | 1 | 463 | 1 | 462 | 9.96e-125 | 374 |
Msa1373350 | AT5G19900.1 | 50.988 | 506 | 161 | 21 | 1 | 463 | 1 | 462 | 9.96e-125 | 374 |
Find 160 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTAGCATTAAACTTCTTCTT+AGG | 0.137829 | tig0019430:+31483 | None:intergenic |
AGGAAATTAGGTTTGATATT+AGG | 0.152951 | tig0019430:+31693 | None:intergenic |
TGAGATTAAAAGCAATAAAT+TGG | 0.191161 | tig0019430:-30686 | Msa1373350:CDS |
TATTATATCCACCACGATTC+TGG | 0.199596 | tig0019430:+31772 | None:intergenic |
TAGTCACCACCTCCATAATT+AGG | 0.203590 | tig0019430:+31123 | None:intergenic |
GGAAATTAGGTTTGATATTA+GGG | 0.217644 | tig0019430:+31694 | None:intergenic |
TGGTAACCAAGAATATTATT+TGG | 0.220572 | tig0019430:+31564 | None:intergenic |
ACTATTCCAAATAATATTCT+TGG | 0.229684 | tig0019430:-31570 | Msa1373350:CDS |
GAGATGATTTACCCTAATTA+TGG | 0.281017 | tig0019430:-31135 | Msa1373350:CDS |
GGGTTCTGAAATTTCATGTT+AGG | 0.308757 | tig0019430:+31714 | None:intergenic |
TTCGTCCCGGCTTGGAATTA+AGG | 0.311625 | tig0019430:+31673 | None:intergenic |
CAGCCTAATCAAACCCTTCA+TGG | 0.312973 | tig0019430:+31272 | None:intergenic |
GGCTTGGAATTAAGGAAATT+AGG | 0.314913 | tig0019430:+31681 | None:intergenic |
TTCTTAATGGAGAGGGAGTT+AGG | 0.317672 | tig0019430:-31012 | Msa1373350:CDS |
GAATATTATTTGGAATAGTT+TGG | 0.330986 | tig0019430:+31574 | None:intergenic |
GTCTCAACAGCAGCTTCCTC+TGG | 0.346933 | tig0019430:-31739 | Msa1373350:CDS |
AAGCGAGGTGGTTTCAAATC+AGG | 0.354951 | tig0019430:-30710 | Msa1373350:CDS |
GAGTGGGGTGTGGATGGTTA+CGG | 0.357631 | tig0019430:-31297 | Msa1373350:CDS |
GAAGTAATAATAACAATAAC+TGG | 0.359197 | tig0019430:-31653 | Msa1373350:CDS |
ATAATAATGTCTTAGAGAAT+AGG | 0.363278 | tig0019430:-31101 | Msa1373350:CDS |
GTTGTTGTTGCTGCTGAGAT+TGG | 0.364305 | tig0019430:+31877 | None:intergenic |
TTTCTTAGCACGGATAATAA+AGG | 0.365902 | tig0019430:+31428 | None:intergenic |
GTCTCCTTCTAGGGAGATGT+TGG | 0.372087 | tig0019430:-31337 | Msa1373350:CDS |
GGATTCTCATATAGCACAAT+TGG | 0.387143 | tig0019430:-31067 | Msa1373350:CDS |
CAACAATGTTTGACAGATGA+AGG | 0.392386 | tig0019430:-30598 | Msa1373350:CDS |
TCATCTGAGGATTCATCATC+TGG | 0.393917 | tig0019430:+31934 | None:intergenic |
AGTGGGGTGTGGATGGTTAC+GGG | 0.394300 | tig0019430:-31296 | Msa1373350:CDS |
GCGACAAGCGCAAAGATATT+AGG | 0.394743 | tig0019430:-31614 | Msa1373350:CDS |
TCCCTAGAAGGAGACAAAAT+AGG | 0.401100 | tig0019430:+31345 | None:intergenic |
TAGCATTAAACTTCTTCTTA+GGG | 0.403904 | tig0019430:+31484 | None:intergenic |
TAATAATGTCTTAGAGAATA+GGG | 0.407085 | tig0019430:-31100 | Msa1373350:CDS |
GGTCCATGAAGGGTTTGATT+AGG | 0.415891 | tig0019430:-31275 | Msa1373350:CDS |
TCTCAAACCTGCTCAAATCT+TGG | 0.417553 | tig0019430:+31154 | None:intergenic |
TGATTTGAAACCACCTCGCT+TGG | 0.418344 | tig0019430:+30712 | None:intergenic |
GAGATTAAAAGCAATAAATT+GGG | 0.430395 | tig0019430:-30685 | Msa1373350:CDS |
TCTCCCAACATCTCCCTAGA+AGG | 0.431587 | tig0019430:+31333 | None:intergenic |
AGAGAATAGGGTAGATGATC+AGG | 0.432490 | tig0019430:-31088 | Msa1373350:CDS |
ATTATCCGTGCTAAGAAATC+CGG | 0.437129 | tig0019430:-31423 | Msa1373350:CDS |
AGTCACCACCTCCATAATTA+GGG | 0.439364 | tig0019430:+31124 | None:intergenic |
GAAGCAAATGAAAGTATAGA+TGG | 0.442989 | tig0019430:-30490 | Msa1373350:CDS |
GGGTCTGATGTTCCTGTCAT+GGG | 0.445316 | tig0019430:-30883 | Msa1373350:CDS |
ATTATATCCACCACGATTCT+GGG | 0.445373 | tig0019430:+31773 | None:intergenic |
GATGAGGAGGATGGTGGTAG+TGG | 0.447179 | tig0019430:-31228 | Msa1373350:CDS |
TTATTTGGAATAGTTTGGTT+GGG | 0.447922 | tig0019430:+31579 | None:intergenic |
GGAAGAGAATTTGACATTGA+GGG | 0.450626 | tig0019430:-31043 | Msa1373350:CDS |
ATAAAGGAAGTGGTATTCCT+AGG | 0.456425 | tig0019430:+31444 | None:intergenic |
AGGAAGAGAATTTGACATTG+AGG | 0.457373 | tig0019430:-31044 | Msa1373350:CDS |
GAATCCTCCTCCGCCTCCTC+AGG | 0.458735 | tig0019430:-31910 | Msa1373350:CDS |
ATGAGGAAGTGGTGGAGAAT+GGG | 0.461656 | tig0019430:-30927 | Msa1373350:CDS |
AGTGCAAGAATCAGATAGTT+GGG | 0.464802 | tig0019430:-30447 | Msa1373350:CDS |
TCTCCTTCTAGGGAGATGTT+GGG | 0.468734 | tig0019430:-31336 | Msa1373350:CDS |
GTGGTATTCCTAGGGGCATA+AGG | 0.469092 | tig0019430:+31453 | None:intergenic |
ATTATTTGGAATAGTTTGGT+TGG | 0.471669 | tig0019430:+31578 | None:intergenic |
GGCTTGACCAAGATTTGAGC+AGG | 0.472253 | tig0019430:-31161 | Msa1373350:CDS |
ATCCACACCCCACTCTTCCT+TGG | 0.472431 | tig0019430:+31305 | None:intergenic |
TCTTAATGGAGAGGGAGTTA+GGG | 0.473595 | tig0019430:-31011 | Msa1373350:CDS |
ACTTTCATTTGCTTCTTCGT+CGG | 0.476598 | tig0019430:+30498 | None:intergenic |
AATGAGGAAGTGGTGGAGAA+TGG | 0.488145 | tig0019430:-30928 | Msa1373350:CDS |
GCGCAAAGATATTAGGAGAA+TGG | 0.488843 | tig0019430:-31607 | Msa1373350:CDS |
TAACTTAACAGCAACATCAT+TGG | 0.490256 | tig0019430:+30795 | None:intergenic |
AACGGATAAATCATCATCTC+TGG | 0.492193 | tig0019430:+30408 | None:intergenic |
AGGAACATGTGGAGGTGGAG+AGG | 0.494464 | tig0019430:-31185 | Msa1373350:CDS |
TAAAGGAAGTGGTATTCCTA+GGG | 0.494535 | tig0019430:+31445 | None:intergenic |
ATTACCTGAGGAGGCGGAGG+AGG | 0.497462 | tig0019430:+31906 | None:intergenic |
GAGTGCAAGAATCAGATAGT+TGG | 0.497730 | tig0019430:-30448 | Msa1373350:CDS |
GTGGATATAATAACAAGGTT+TGG | 0.501034 | tig0019430:-31761 | Msa1373350:CDS |
GTTTCTTGAGAGGCAAAACC+AGG | 0.501187 | tig0019430:-30968 | Msa1373350:CDS |
GGAAGCACCGCGGGAGTCAC+AGG | 0.503477 | tig0019430:+31372 | None:intergenic |
AGACATGGCCAAGGAAGAGT+GGG | 0.504798 | tig0019430:-31313 | Msa1373350:CDS |
CAATAACTGGAAGGGAAAGA+AGG | 0.508608 | tig0019430:-31640 | Msa1373350:CDS |
AAGGAAGAGTGGGGTGTGGA+TGG | 0.511058 | tig0019430:-31303 | Msa1373350:CDS |
GGGAGTTAGGGGATCTGCGA+AGG | 0.512859 | tig0019430:-30999 | Msa1373350:CDS |
GCTGTTAAGTTAGACAATGA+TGG | 0.518940 | tig0019430:-30784 | Msa1373350:CDS |
TAGGGAGATGTTGGGAGACA+TGG | 0.529357 | tig0019430:-31328 | Msa1373350:CDS |
TTCTGGGTCATCATCGGAGG+AGG | 0.530403 | tig0019430:+31789 | None:intergenic |
ATTTACCCTAATTATGGAGG+TGG | 0.532452 | tig0019430:-31129 | Msa1373350:CDS |
TTGTTCTCAATTCCCATGAC+AGG | 0.534410 | tig0019430:+30871 | None:intergenic |
TGGGTCATCATCGGAGGAGG+AGG | 0.536454 | tig0019430:+31792 | None:intergenic |
GGATGGTTACGGGTCCATGA+AGG | 0.537436 | tig0019430:-31286 | Msa1373350:CDS |
TAATTTCCTTAATTCCAAGC+CGG | 0.537774 | tig0019430:-31679 | Msa1373350:CDS |
GGGGTCTGATGTTCCTGTCA+TGG | 0.540719 | tig0019430:-30884 | Msa1373350:CDS |
TTGTTATTATTACTTCGTCC+CGG | 0.541685 | tig0019430:+31660 | None:intergenic |
AGCACGGATAATAAAGGAAG+TGG | 0.542401 | tig0019430:+31434 | None:intergenic |
AATTTCCTTAATTCCAAGCC+GGG | 0.542484 | tig0019430:-31678 | Msa1373350:CDS |
AAAAGCAATAAATTGGGAGG+TGG | 0.545853 | tig0019430:-30679 | Msa1373350:CDS |
TTAATTACCTGAGGAGGCGG+AGG | 0.547707 | tig0019430:+31903 | None:intergenic |
TAACATCTTCAACCACAGCC+TGG | 0.547796 | tig0019430:+30950 | None:intergenic |
GATGGTTACGGGTCCATGAA+GGG | 0.550466 | tig0019430:-31285 | Msa1373350:CDS |
ACCGCGGGAGTCACAGGACA+AGG | 0.556762 | tig0019430:+31378 | None:intergenic |
TTCTCATATAGCACAATTGG+AGG | 0.557751 | tig0019430:-31064 | Msa1373350:CDS |
CCACGATTCTGGGTCATCAT+CGG | 0.558262 | tig0019430:+31783 | None:intergenic |
GAAGGAGACAAAATAGGTGT+AGG | 0.563617 | tig0019430:+31351 | None:intergenic |
TGAGATGGTTGATTCAATGC+TGG | 0.564051 | tig0019430:-30845 | Msa1373350:CDS |
GATTTGCTCCTTATGCCCCT+AGG | 0.564214 | tig0019430:-31461 | Msa1373350:CDS |
AATAATAACAATAACTGGAA+GGG | 0.564282 | tig0019430:-31648 | Msa1373350:CDS |
TTGTTAATTACCTGAGGAGG+CGG | 0.568063 | tig0019430:+31900 | None:intergenic |
TGTGGAGGAACATGTGGAGG+TGG | 0.568876 | tig0019430:-31190 | Msa1373350:CDS |
ATGAGGAGGATGGTGGTAGT+GGG | 0.569684 | tig0019430:-31227 | Msa1373350:CDS |
TGAGAGGCAAAACCAGGCTG+TGG | 0.571139 | tig0019430:-30962 | Msa1373350:CDS |
GAGACATGGCCAAGGAAGAG+TGG | 0.574369 | tig0019430:-31314 | Msa1373350:CDS |
AACATGTGGAGGTGGAGAGG+AGG | 0.577247 | tig0019430:-31182 | Msa1373350:CDS |
GGCCAAGGAAGAGTGGGGTG+TGG | 0.578600 | tig0019430:-31307 | Msa1373350:CDS |
GGAGGATGCTGTTTCTTGAG+AGG | 0.580553 | tig0019430:-30978 | Msa1373350:CDS |
TGAAGATGTTAATGAGGAAG+TGG | 0.582378 | tig0019430:-30938 | Msa1373350:CDS |
TCATCATCTTCATCTGCGGT+TGG | 0.583649 | tig0019430:+31835 | None:intergenic |
GGTCTGATAATGAAAGTGAA+GGG | 0.586263 | tig0019430:-30906 | Msa1373350:CDS |
GTTGATTCAATGCTGGAAAG+TGG | 0.587761 | tig0019430:-30838 | Msa1373350:CDS |
TAATAATAACAATAACTGGA+AGG | 0.588600 | tig0019430:-31649 | Msa1373350:CDS |
TGGTTGTTAATTACCTGAGG+AGG | 0.589919 | tig0019430:+31897 | None:intergenic |
CTTAATGGAGAGGGAGTTAG+GGG | 0.592459 | tig0019430:-31010 | Msa1373350:CDS |
ATTTATCCGTTGCTCAGTAG+CGG | 0.594666 | tig0019430:-30396 | None:intergenic |
GATTGTAACTCGTGAAGAGT+AGG | 0.597765 | tig0019430:+31537 | None:intergenic |
GGGTCTGATAATGAAAGTGA+AGG | 0.598925 | tig0019430:-30907 | Msa1373350:CDS |
AGTTAGGGGATCTGCGAAGG+AGG | 0.600321 | tig0019430:-30996 | Msa1373350:CDS |
AGATGTTAATGAGGAAGTGG+TGG | 0.601396 | tig0019430:-30935 | Msa1373350:CDS |
GAGTGATGTGGAGGAACATG+TGG | 0.602651 | tig0019430:-31196 | Msa1373350:CDS |
CTTTATGTTTGATGATGTGA+AGG | 0.604414 | tig0019430:-30656 | Msa1373350:CDS |
ATGATTTACCCTAATTATGG+AGG | 0.605797 | tig0019430:-31132 | Msa1373350:CDS |
TGTTCATGATGATGAAGATG+AGG | 0.609691 | tig0019430:-31244 | Msa1373350:CDS |
ACTCGTGAAGAGTAGGTGGT+TGG | 0.610555 | tig0019430:+31544 | None:intergenic |
AATTGAGAACAATGTTGAGA+TGG | 0.615362 | tig0019430:-30860 | Msa1373350:CDS |
GATTGGTTGTTAATTACCTG+AGG | 0.617500 | tig0019430:+31894 | None:intergenic |
ATAGGTGTAGGAAGCACCGC+GGG | 0.617806 | tig0019430:+31363 | None:intergenic |
CACGAGCGATGCAATACCAC+CGG | 0.619944 | tig0019430:+31404 | None:intergenic |
TGAGTCATCATCTTCATCTG+CGG | 0.622247 | tig0019430:+31831 | None:intergenic |
ATTAAAAGCAATAAATTGGG+AGG | 0.623697 | tig0019430:-30682 | Msa1373350:CDS |
GGAAGAGTCTGTTCCAAGCG+AGG | 0.624493 | tig0019430:-30725 | Msa1373350:CDS |
TGGGTCGAGTGAGAGTGATG+TGG | 0.627431 | tig0019430:-31208 | Msa1373350:CDS |
AGATGGCTTAGTGAGTGAGA+CGG | 0.627723 | tig0019430:-30473 | Msa1373350:CDS |
GGAGGAGGATTCATCATCTG+AGG | 0.632835 | tig0019430:+31921 | None:intergenic |
GTCTGATAATGAAAGTGAAG+GGG | 0.635873 | tig0019430:-30905 | Msa1373350:CDS |
TGTAACTCGTGAAGAGTAGG+TGG | 0.636079 | tig0019430:+31540 | None:intergenic |
TGATGATGTGAAGGAAGAGA+AGG | 0.637450 | tig0019430:-30647 | Msa1373350:CDS |
ATCCGTGCTAAGAAATCCGG+TGG | 0.644195 | tig0019430:-31420 | Msa1373350:CDS |
TACCACCGGATTTCTTAGCA+CGG | 0.644469 | tig0019430:+31418 | None:intergenic |
GATGATGAAGATGAGGAGGA+TGG | 0.647257 | tig0019430:-31237 | Msa1373350:CDS |
TTGATTCAATGCTGGAAAGT+GGG | 0.647613 | tig0019430:-30837 | Msa1373350:CDS |
CGATTCTGGGTCATCATCGG+AGG | 0.647939 | tig0019430:+31786 | None:intergenic |
GATGAAGATGAGGAGGATGG+TGG | 0.648811 | tig0019430:-31234 | Msa1373350:CDS |
AATTTCATGTTAGGATCCAG+AGG | 0.650747 | tig0019430:+31723 | None:intergenic |
CCGATGATGACCCAGAATCG+TGG | 0.651397 | tig0019430:-31783 | Msa1373350:CDS |
CGGCTTCCGCTACTGAGCAA+CGG | 0.652542 | tig0019430:+30390 | None:intergenic |
TGTGGTTGAAGATGTTAATG+AGG | 0.653979 | tig0019430:-30944 | Msa1373350:CDS |
CTTGTGAATCGAAAAGAGAG+TGG | 0.654418 | tig0019430:-30556 | Msa1373350:CDS |
GATGGAGTATCAGAAGCTGA+AGG | 0.655345 | tig0019430:-30766 | Msa1373350:CDS |
AGAGTCTGTTCCAAGCGAGG+TGG | 0.657368 | tig0019430:-30722 | Msa1373350:CDS |
TCTGATAATGAAAGTGAAGG+GGG | 0.659594 | tig0019430:-30904 | Msa1373350:CDS |
TGGGAGAAATGAAAACATTG+AGG | 0.659944 | tig0019430:-30818 | Msa1373350:CDS |
ACCTTGTCCTGTGACTCCCG+CGG | 0.660411 | tig0019430:-31379 | Msa1373350:CDS |
TCATGATGATGAAGATGAGG+AGG | 0.669532 | tig0019430:-31241 | Msa1373350:CDS |
TGATGTGGAGGAACATGTGG+AGG | 0.677019 | tig0019430:-31193 | Msa1373350:CDS |
ATGATGACCCAGAATCGTGG+TGG | 0.686427 | tig0019430:-31780 | Msa1373350:CDS |
TCGTGGTGGATATAATAACA+AGG | 0.692167 | tig0019430:-31766 | Msa1373350:CDS |
AAAGGAAGTGGTATTCCTAG+GGG | 0.695257 | tig0019430:+31446 | None:intergenic |
GTCGAGTGAGAGTGATGTGG+AGG | 0.696796 | tig0019430:-31205 | Msa1373350:CDS |
GATGTTGGGAGACATGGCCA+AGG | 0.712349 | tig0019430:-31322 | Msa1373350:CDS |
CTGATAATGAAAGTGAAGGG+GGG | 0.728770 | tig0019430:-30903 | Msa1373350:CDS |
AATAGGTGTAGGAAGCACCG+CGG | 0.741680 | tig0019430:+31362 | None:intergenic |
GACATGGCCAAGGAAGAGTG+GGG | 0.742081 | tig0019430:-31312 | Msa1373350:CDS |
GGTTGGTGAGAGAGTAACTG+AGG | 0.774421 | tig0019430:+31852 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GAAGTAATAATAACAATAAC+TGG | - | tig0019430:30715-30734 | Msa1373350:CDS | 20.0% |
!! | TAATAATAACAATAACTGGA+AGG | - | tig0019430:30719-30738 | Msa1373350:CDS | 20.0% |
!! | AATAATAACAATAACTGGAA+GGG | - | tig0019430:30720-30739 | Msa1373350:CDS | 20.0% |
!!! | GAATATTATTTGGAATAGTT+TGG | + | tig0019430:30797-30816 | None:intergenic | 20.0% |
!! | ACTATTCCAAATAATATTCT+TGG | - | tig0019430:30798-30817 | Msa1373350:CDS | 20.0% |
!! | ATAATAATGTCTTAGAGAAT+AGG | - | tig0019430:31267-31286 | Msa1373350:CDS | 20.0% |
!! | TAATAATGTCTTAGAGAATA+GGG | - | tig0019430:31268-31287 | Msa1373350:CDS | 20.0% |
!! | TGAGATTAAAAGCAATAAAT+TGG | - | tig0019430:31682-31701 | Msa1373350:CDS | 20.0% |
!! | GAGATTAAAAGCAATAAATT+GGG | - | tig0019430:31683-31702 | Msa1373350:CDS | 20.0% |
!! | GAAGTAATAATAACAATAAC+TGG | - | tig0019430:30715-30734 | Msa1373350:CDS | 20.0% |
!! | TAATAATAACAATAACTGGA+AGG | - | tig0019430:30719-30738 | Msa1373350:CDS | 20.0% |
!! | AATAATAACAATAACTGGAA+GGG | - | tig0019430:30720-30739 | Msa1373350:CDS | 20.0% |
!!! | GAATATTATTTGGAATAGTT+TGG | + | tig0019430:30797-30816 | None:intergenic | 20.0% |
!! | ACTATTCCAAATAATATTCT+TGG | - | tig0019430:30798-30817 | Msa1373350:CDS | 20.0% |
!! | ATAATAATGTCTTAGAGAAT+AGG | - | tig0019430:31267-31286 | Msa1373350:CDS | 20.0% |
!! | TAATAATGTCTTAGAGAATA+GGG | - | tig0019430:31268-31287 | Msa1373350:CDS | 20.0% |
!! | TGAGATTAAAAGCAATAAAT+TGG | - | tig0019430:31682-31701 | Msa1373350:CDS | 20.0% |
!! | GAGATTAAAAGCAATAAATT+GGG | - | tig0019430:31683-31702 | Msa1373350:CDS | 20.0% |
! | GGAAATTAGGTTTGATATTA+GGG | + | tig0019430:30677-30696 | None:intergenic | 25.0% |
! | AGGAAATTAGGTTTGATATT+AGG | + | tig0019430:30678-30697 | None:intergenic | 25.0% |
!! | TTATTTGGAATAGTTTGGTT+GGG | + | tig0019430:30792-30811 | None:intergenic | 25.0% |
!! | ATTATTTGGAATAGTTTGGT+TGG | + | tig0019430:30793-30812 | None:intergenic | 25.0% |
! | TGGTAACCAAGAATATTATT+TGG | + | tig0019430:30807-30826 | None:intergenic | 25.0% |
! | TAGCATTAAACTTCTTCTTA+GGG | + | tig0019430:30887-30906 | None:intergenic | 25.0% |
! | ATTAAAAGCAATAAATTGGG+AGG | - | tig0019430:31686-31705 | Msa1373350:CDS | 25.0% |
! | GGAAATTAGGTTTGATATTA+GGG | + | tig0019430:30677-30696 | None:intergenic | 25.0% |
! | AGGAAATTAGGTTTGATATT+AGG | + | tig0019430:30678-30697 | None:intergenic | 25.0% |
!! | TTATTTGGAATAGTTTGGTT+GGG | + | tig0019430:30792-30811 | None:intergenic | 25.0% |
!! | ATTATTTGGAATAGTTTGGT+TGG | + | tig0019430:30793-30812 | None:intergenic | 25.0% |
! | TGGTAACCAAGAATATTATT+TGG | + | tig0019430:30807-30826 | None:intergenic | 25.0% |
! | TAGCATTAAACTTCTTCTTA+GGG | + | tig0019430:30887-30906 | None:intergenic | 25.0% |
! | ATTAAAAGCAATAAATTGGG+AGG | - | tig0019430:31686-31705 | Msa1373350:CDS | 25.0% |
GTGGATATAATAACAAGGTT+TGG | - | tig0019430:30607-30626 | Msa1373350:CDS | 30.0% | |
TAATTTCCTTAATTCCAAGC+CGG | - | tig0019430:30689-30708 | Msa1373350:CDS | 30.0% | |
! | TTGTTATTATTACTTCGTCC+CGG | + | tig0019430:30711-30730 | None:intergenic | 30.0% |
CTAGCATTAAACTTCTTCTT+AGG | + | tig0019430:30888-30907 | None:intergenic | 30.0% | |
TTTCTTAGCACGGATAATAA+AGG | + | tig0019430:30943-30962 | None:intergenic | 30.0% | |
GAGATGATTTACCCTAATTA+TGG | - | tig0019430:31233-31252 | Msa1373350:CDS | 30.0% | |
ATGATTTACCCTAATTATGG+AGG | - | tig0019430:31236-31255 | Msa1373350:CDS | 30.0% | |
AATTGAGAACAATGTTGAGA+TGG | - | tig0019430:31508-31527 | Msa1373350:CDS | 30.0% | |
TAACTTAACAGCAACATCAT+TGG | + | tig0019430:31576-31595 | None:intergenic | 30.0% | |
!! | CTTTATGTTTGATGATGTGA+AGG | - | tig0019430:31712-31731 | Msa1373350:CDS | 30.0% |
! | GAAGCAAATGAAAGTATAGA+TGG | - | tig0019430:31878-31897 | Msa1373350:CDS | 30.0% |
GTGGATATAATAACAAGGTT+TGG | - | tig0019430:30607-30626 | Msa1373350:CDS | 30.0% | |
TAATTTCCTTAATTCCAAGC+CGG | - | tig0019430:30689-30708 | Msa1373350:CDS | 30.0% | |
! | TTGTTATTATTACTTCGTCC+CGG | + | tig0019430:30711-30730 | None:intergenic | 30.0% |
CTAGCATTAAACTTCTTCTT+AGG | + | tig0019430:30888-30907 | None:intergenic | 30.0% | |
TTTCTTAGCACGGATAATAA+AGG | + | tig0019430:30943-30962 | None:intergenic | 30.0% | |
GAGATGATTTACCCTAATTA+TGG | - | tig0019430:31233-31252 | Msa1373350:CDS | 30.0% | |
ATGATTTACCCTAATTATGG+AGG | - | tig0019430:31236-31255 | Msa1373350:CDS | 30.0% | |
AATTGAGAACAATGTTGAGA+TGG | - | tig0019430:31508-31527 | Msa1373350:CDS | 30.0% | |
TAACTTAACAGCAACATCAT+TGG | + | tig0019430:31576-31595 | None:intergenic | 30.0% | |
!! | CTTTATGTTTGATGATGTGA+AGG | - | tig0019430:31712-31731 | Msa1373350:CDS | 30.0% |
! | GAAGCAAATGAAAGTATAGA+TGG | - | tig0019430:31878-31897 | Msa1373350:CDS | 30.0% |
! | GATTGGTTGTTAATTACCTG+AGG | + | tig0019430:30477-30496 | None:intergenic | 35.0% |
ATTATATCCACCACGATTCT+GGG | + | tig0019430:30598-30617 | None:intergenic | 35.0% | |
TATTATATCCACCACGATTC+TGG | + | tig0019430:30599-30618 | None:intergenic | 35.0% | |
!! | TCGTGGTGGATATAATAACA+AGG | - | tig0019430:30602-30621 | Msa1373350:CDS | 35.0% |
AATTTCATGTTAGGATCCAG+AGG | + | tig0019430:30648-30667 | None:intergenic | 35.0% | |
!! | GGGTTCTGAAATTTCATGTT+AGG | + | tig0019430:30657-30676 | None:intergenic | 35.0% |
GGCTTGGAATTAAGGAAATT+AGG | + | tig0019430:30690-30709 | None:intergenic | 35.0% | |
AATTTCCTTAATTCCAAGCC+GGG | - | tig0019430:30690-30709 | Msa1373350:CDS | 35.0% | |
TAAAGGAAGTGGTATTCCTA+GGG | + | tig0019430:30926-30945 | None:intergenic | 35.0% | |
ATAAAGGAAGTGGTATTCCT+AGG | + | tig0019430:30927-30946 | None:intergenic | 35.0% | |
ATTATCCGTGCTAAGAAATC+CGG | - | tig0019430:30945-30964 | Msa1373350:CDS | 35.0% | |
! | ACCTATTTTGTCTCCTTCTA+GGG | - | tig0019430:31022-31041 | Msa1373350:CDS | 35.0% |
! | TGTTCATGATGATGAAGATG+AGG | - | tig0019430:31124-31143 | Msa1373350:CDS | 35.0% |
ATTTACCCTAATTATGGAGG+TGG | - | tig0019430:31239-31258 | Msa1373350:CDS | 35.0% | |
GGATTCTCATATAGCACAAT+TGG | - | tig0019430:31301-31320 | Msa1373350:CDS | 35.0% | |
TTCTCATATAGCACAATTGG+AGG | - | tig0019430:31304-31323 | Msa1373350:CDS | 35.0% | |
AGGAAGAGAATTTGACATTG+AGG | - | tig0019430:31324-31343 | Msa1373350:CDS | 35.0% | |
GGAAGAGAATTTGACATTGA+GGG | - | tig0019430:31325-31344 | Msa1373350:CDS | 35.0% | |
TGTGGTTGAAGATGTTAATG+AGG | - | tig0019430:31424-31443 | Msa1373350:CDS | 35.0% | |
TGAAGATGTTAATGAGGAAG+TGG | - | tig0019430:31430-31449 | Msa1373350:CDS | 35.0% | |
! | GGTCTGATAATGAAAGTGAA+GGG | - | tig0019430:31462-31481 | Msa1373350:CDS | 35.0% |
! | GTCTGATAATGAAAGTGAAG+GGG | - | tig0019430:31463-31482 | Msa1373350:CDS | 35.0% |
! | TCTGATAATGAAAGTGAAGG+GGG | - | tig0019430:31464-31483 | Msa1373350:CDS | 35.0% |
TTGATTCAATGCTGGAAAGT+GGG | - | tig0019430:31531-31550 | Msa1373350:CDS | 35.0% | |
TGGGAGAAATGAAAACATTG+AGG | - | tig0019430:31550-31569 | Msa1373350:CDS | 35.0% | |
GCTGTTAAGTTAGACAATGA+TGG | - | tig0019430:31584-31603 | Msa1373350:CDS | 35.0% | |
!!! | AGGTGTCGATGATGTTTTTA+TGG | - | tig0019430:31622-31641 | Msa1373350:CDS | 35.0% |
AAAAGCAATAAATTGGGAGG+TGG | - | tig0019430:31689-31708 | Msa1373350:CDS | 35.0% | |
CAACAATGTTTGACAGATGA+AGG | - | tig0019430:31770-31789 | Msa1373350:CDS | 35.0% | |
! | ATTCACAAGATCGTTTTCCT+TGG | + | tig0019430:31801-31820 | None:intergenic | 35.0% |
ACTTTCATTTGCTTCTTCGT+CGG | + | tig0019430:31873-31892 | None:intergenic | 35.0% | |
AGTGCAAGAATCAGATAGTT+GGG | - | tig0019430:31921-31940 | Msa1373350:CDS | 35.0% | |
AACGGATAAATCATCATCTC+TGG | + | tig0019430:31963-31982 | None:intergenic | 35.0% | |
! | GATTGGTTGTTAATTACCTG+AGG | + | tig0019430:30477-30496 | None:intergenic | 35.0% |
ATTATATCCACCACGATTCT+GGG | + | tig0019430:30598-30617 | None:intergenic | 35.0% | |
TATTATATCCACCACGATTC+TGG | + | tig0019430:30599-30618 | None:intergenic | 35.0% | |
!! | TCGTGGTGGATATAATAACA+AGG | - | tig0019430:30602-30621 | Msa1373350:CDS | 35.0% |
AATTTCATGTTAGGATCCAG+AGG | + | tig0019430:30648-30667 | None:intergenic | 35.0% | |
!! | GGGTTCTGAAATTTCATGTT+AGG | + | tig0019430:30657-30676 | None:intergenic | 35.0% |
GGCTTGGAATTAAGGAAATT+AGG | + | tig0019430:30690-30709 | None:intergenic | 35.0% | |
AATTTCCTTAATTCCAAGCC+GGG | - | tig0019430:30690-30709 | Msa1373350:CDS | 35.0% | |
TAAAGGAAGTGGTATTCCTA+GGG | + | tig0019430:30926-30945 | None:intergenic | 35.0% | |
ATAAAGGAAGTGGTATTCCT+AGG | + | tig0019430:30927-30946 | None:intergenic | 35.0% | |
ATTATCCGTGCTAAGAAATC+CGG | - | tig0019430:30945-30964 | Msa1373350:CDS | 35.0% | |
! | ACCTATTTTGTCTCCTTCTA+GGG | - | tig0019430:31022-31041 | Msa1373350:CDS | 35.0% |
! | TGTTCATGATGATGAAGATG+AGG | - | tig0019430:31124-31143 | Msa1373350:CDS | 35.0% |
ATTTACCCTAATTATGGAGG+TGG | - | tig0019430:31239-31258 | Msa1373350:CDS | 35.0% | |
GGATTCTCATATAGCACAAT+TGG | - | tig0019430:31301-31320 | Msa1373350:CDS | 35.0% | |
TTCTCATATAGCACAATTGG+AGG | - | tig0019430:31304-31323 | Msa1373350:CDS | 35.0% | |
AGGAAGAGAATTTGACATTG+AGG | - | tig0019430:31324-31343 | Msa1373350:CDS | 35.0% | |
GGAAGAGAATTTGACATTGA+GGG | - | tig0019430:31325-31344 | Msa1373350:CDS | 35.0% | |
TGTGGTTGAAGATGTTAATG+AGG | - | tig0019430:31424-31443 | Msa1373350:CDS | 35.0% | |
TGAAGATGTTAATGAGGAAG+TGG | - | tig0019430:31430-31449 | Msa1373350:CDS | 35.0% | |
! | GGTCTGATAATGAAAGTGAA+GGG | - | tig0019430:31462-31481 | Msa1373350:CDS | 35.0% |
! | GTCTGATAATGAAAGTGAAG+GGG | - | tig0019430:31463-31482 | Msa1373350:CDS | 35.0% |
! | TCTGATAATGAAAGTGAAGG+GGG | - | tig0019430:31464-31483 | Msa1373350:CDS | 35.0% |
TTGATTCAATGCTGGAAAGT+GGG | - | tig0019430:31531-31550 | Msa1373350:CDS | 35.0% | |
TGGGAGAAATGAAAACATTG+AGG | - | tig0019430:31550-31569 | Msa1373350:CDS | 35.0% | |
GCTGTTAAGTTAGACAATGA+TGG | - | tig0019430:31584-31603 | Msa1373350:CDS | 35.0% | |
!!! | AGGTGTCGATGATGTTTTTA+TGG | - | tig0019430:31622-31641 | Msa1373350:CDS | 35.0% |
AAAAGCAATAAATTGGGAGG+TGG | - | tig0019430:31689-31708 | Msa1373350:CDS | 35.0% | |
CAACAATGTTTGACAGATGA+AGG | - | tig0019430:31770-31789 | Msa1373350:CDS | 35.0% | |
! | ATTCACAAGATCGTTTTCCT+TGG | + | tig0019430:31801-31820 | None:intergenic | 35.0% |
ACTTTCATTTGCTTCTTCGT+CGG | + | tig0019430:31873-31892 | None:intergenic | 35.0% | |
AGTGCAAGAATCAGATAGTT+GGG | - | tig0019430:31921-31940 | Msa1373350:CDS | 35.0% | |
AACGGATAAATCATCATCTC+TGG | + | tig0019430:31963-31982 | None:intergenic | 35.0% | |
TCATCTGAGGATTCATCATC+TGG | + | tig0019430:30437-30456 | None:intergenic | 40.0% | |
TTGTTAATTACCTGAGGAGG+CGG | + | tig0019430:30471-30490 | None:intergenic | 40.0% | |
TGGTTGTTAATTACCTGAGG+AGG | + | tig0019430:30474-30493 | None:intergenic | 40.0% | |
TGAGTCATCATCTTCATCTG+CGG | + | tig0019430:30540-30559 | None:intergenic | 40.0% | |
CAATAACTGGAAGGGAAAGA+AGG | - | tig0019430:30728-30747 | Msa1373350:CDS | 40.0% | |
GCGCAAAGATATTAGGAGAA+TGG | - | tig0019430:30761-30780 | Msa1373350:CDS | 40.0% | |
GATTGTAACTCGTGAAGAGT+AGG | + | tig0019430:30834-30853 | None:intergenic | 40.0% | |
AAAGGAAGTGGTATTCCTAG+GGG | + | tig0019430:30925-30944 | None:intergenic | 40.0% | |
AGCACGGATAATAAAGGAAG+TGG | + | tig0019430:30937-30956 | None:intergenic | 40.0% | |
GAAGGAGACAAAATAGGTGT+AGG | + | tig0019430:31020-31039 | None:intergenic | 40.0% | |
! | CACCTATTTTGTCTCCTTCT+AGG | - | tig0019430:31021-31040 | Msa1373350:CDS | 40.0% |
TCCCTAGAAGGAGACAAAAT+AGG | + | tig0019430:31026-31045 | None:intergenic | 40.0% | |
! | TCATGATGATGAAGATGAGG+AGG | - | tig0019430:31127-31146 | Msa1373350:CDS | 40.0% |
TCTCAAACCTGCTCAAATCT+TGG | + | tig0019430:31217-31236 | None:intergenic | 40.0% | |
AGTCACCACCTCCATAATTA+GGG | + | tig0019430:31247-31266 | None:intergenic | 40.0% | |
TAGTCACCACCTCCATAATT+AGG | + | tig0019430:31248-31267 | None:intergenic | 40.0% | |
AGAGAATAGGGTAGATGATC+AGG | - | tig0019430:31280-31299 | Msa1373350:CDS | 40.0% | |
! | AGCGTCTTTTCTTAATGGAG+AGG | - | tig0019430:31348-31367 | Msa1373350:CDS | 40.0% |
! | GCGTCTTTTCTTAATGGAGA+GGG | - | tig0019430:31349-31368 | Msa1373350:CDS | 40.0% |
TTCTTAATGGAGAGGGAGTT+AGG | - | tig0019430:31356-31375 | Msa1373350:CDS | 40.0% | |
TCTTAATGGAGAGGGAGTTA+GGG | - | tig0019430:31357-31376 | Msa1373350:CDS | 40.0% | |
AGATGTTAATGAGGAAGTGG+TGG | - | tig0019430:31433-31452 | Msa1373350:CDS | 40.0% | |
! | GGGTCTGATAATGAAAGTGA+AGG | - | tig0019430:31461-31480 | Msa1373350:CDS | 40.0% |
! | CTGATAATGAAAGTGAAGGG+GGG | - | tig0019430:31465-31484 | Msa1373350:CDS | 40.0% |
TTGTTCTCAATTCCCATGAC+AGG | + | tig0019430:31500-31519 | None:intergenic | 40.0% | |
! | TGAGATGGTTGATTCAATGC+TGG | - | tig0019430:31523-31542 | Msa1373350:CDS | 40.0% |
! | GTTGATTCAATGCTGGAAAG+TGG | - | tig0019430:31530-31549 | Msa1373350:CDS | 40.0% |
! | TGATGATGTGAAGGAAGAGA+AGG | - | tig0019430:31721-31740 | Msa1373350:CDS | 40.0% |
CTTGTGAATCGAAAAGAGAG+TGG | - | tig0019430:31812-31831 | Msa1373350:CDS | 40.0% | |
GAGTGCAAGAATCAGATAGT+TGG | - | tig0019430:31920-31939 | Msa1373350:CDS | 40.0% | |
TCATCTGAGGATTCATCATC+TGG | + | tig0019430:30437-30456 | None:intergenic | 40.0% | |
TTGTTAATTACCTGAGGAGG+CGG | + | tig0019430:30471-30490 | None:intergenic | 40.0% | |
TGGTTGTTAATTACCTGAGG+AGG | + | tig0019430:30474-30493 | None:intergenic | 40.0% | |
TGAGTCATCATCTTCATCTG+CGG | + | tig0019430:30540-30559 | None:intergenic | 40.0% | |
CAATAACTGGAAGGGAAAGA+AGG | - | tig0019430:30728-30747 | Msa1373350:CDS | 40.0% | |
GCGCAAAGATATTAGGAGAA+TGG | - | tig0019430:30761-30780 | Msa1373350:CDS | 40.0% | |
GATTGTAACTCGTGAAGAGT+AGG | + | tig0019430:30834-30853 | None:intergenic | 40.0% | |
AAAGGAAGTGGTATTCCTAG+GGG | + | tig0019430:30925-30944 | None:intergenic | 40.0% | |
AGCACGGATAATAAAGGAAG+TGG | + | tig0019430:30937-30956 | None:intergenic | 40.0% | |
GAAGGAGACAAAATAGGTGT+AGG | + | tig0019430:31020-31039 | None:intergenic | 40.0% | |
! | CACCTATTTTGTCTCCTTCT+AGG | - | tig0019430:31021-31040 | Msa1373350:CDS | 40.0% |
TCCCTAGAAGGAGACAAAAT+AGG | + | tig0019430:31026-31045 | None:intergenic | 40.0% | |
! | TCATGATGATGAAGATGAGG+AGG | - | tig0019430:31127-31146 | Msa1373350:CDS | 40.0% |
TCTCAAACCTGCTCAAATCT+TGG | + | tig0019430:31217-31236 | None:intergenic | 40.0% | |
AGTCACCACCTCCATAATTA+GGG | + | tig0019430:31247-31266 | None:intergenic | 40.0% | |
TAGTCACCACCTCCATAATT+AGG | + | tig0019430:31248-31267 | None:intergenic | 40.0% | |
AGAGAATAGGGTAGATGATC+AGG | - | tig0019430:31280-31299 | Msa1373350:CDS | 40.0% | |
! | AGCGTCTTTTCTTAATGGAG+AGG | - | tig0019430:31348-31367 | Msa1373350:CDS | 40.0% |
! | GCGTCTTTTCTTAATGGAGA+GGG | - | tig0019430:31349-31368 | Msa1373350:CDS | 40.0% |
TTCTTAATGGAGAGGGAGTT+AGG | - | tig0019430:31356-31375 | Msa1373350:CDS | 40.0% | |
TCTTAATGGAGAGGGAGTTA+GGG | - | tig0019430:31357-31376 | Msa1373350:CDS | 40.0% | |
AGATGTTAATGAGGAAGTGG+TGG | - | tig0019430:31433-31452 | Msa1373350:CDS | 40.0% | |
! | GGGTCTGATAATGAAAGTGA+AGG | - | tig0019430:31461-31480 | Msa1373350:CDS | 40.0% |
! | CTGATAATGAAAGTGAAGGG+GGG | - | tig0019430:31465-31484 | Msa1373350:CDS | 40.0% |
TTGTTCTCAATTCCCATGAC+AGG | + | tig0019430:31500-31519 | None:intergenic | 40.0% | |
! | TGAGATGGTTGATTCAATGC+TGG | - | tig0019430:31523-31542 | Msa1373350:CDS | 40.0% |
! | GTTGATTCAATGCTGGAAAG+TGG | - | tig0019430:31530-31549 | Msa1373350:CDS | 40.0% |
! | TGATGATGTGAAGGAAGAGA+AGG | - | tig0019430:31721-31740 | Msa1373350:CDS | 40.0% |
CTTGTGAATCGAAAAGAGAG+TGG | - | tig0019430:31812-31831 | Msa1373350:CDS | 40.0% | |
GAGTGCAAGAATCAGATAGT+TGG | - | tig0019430:31920-31939 | Msa1373350:CDS | 40.0% | |
! | GTTGTTGTTGCTGCTGAGAT+TGG | + | tig0019430:30494-30513 | None:intergenic | 45.0% |
TCATCATCTTCATCTGCGGT+TGG | + | tig0019430:30536-30555 | None:intergenic | 45.0% | |
ATTATTACTTCGTCCCGGCT+TGG | + | tig0019430:30706-30725 | None:intergenic | 45.0% | |
GCGACAAGCGCAAAGATATT+AGG | - | tig0019430:30754-30773 | Msa1373350:CDS | 45.0% | |
TGTAACTCGTGAAGAGTAGG+TGG | + | tig0019430:30831-30850 | None:intergenic | 45.0% | |
TACCACCGGATTTCTTAGCA+CGG | + | tig0019430:30953-30972 | None:intergenic | 45.0% | |
! | TCTCCTTCTAGGGAGATGTT+GGG | - | tig0019430:31032-31051 | Msa1373350:CDS | 45.0% |
GGTCCATGAAGGGTTTGATT+AGG | - | tig0019430:31093-31112 | Msa1373350:CDS | 45.0% | |
CAGCCTAATCAAACCCTTCA+TGG | + | tig0019430:31099-31118 | None:intergenic | 45.0% | |
GATGATGAAGATGAGGAGGA+TGG | - | tig0019430:31131-31150 | Msa1373350:CDS | 45.0% | |
!!! | GAGGGAGCGTCTTTTCTTAA+TGG | - | tig0019430:31343-31362 | Msa1373350:CDS | 45.0% |
CTTAATGGAGAGGGAGTTAG+GGG | - | tig0019430:31358-31377 | Msa1373350:CDS | 45.0% | |
GTTTCTTGAGAGGCAAAACC+AGG | - | tig0019430:31400-31419 | Msa1373350:CDS | 45.0% | |
TAACATCTTCAACCACAGCC+TGG | + | tig0019430:31421-31440 | None:intergenic | 45.0% | |
! | AATGAGGAAGTGGTGGAGAA+TGG | - | tig0019430:31440-31459 | Msa1373350:CDS | 45.0% |
! | ATGAGGAAGTGGTGGAGAAT+GGG | - | tig0019430:31441-31460 | Msa1373350:CDS | 45.0% |
! | GATGGAGTATCAGAAGCTGA+AGG | - | tig0019430:31602-31621 | Msa1373350:CDS | 45.0% |
! | TGATTTGAAACCACCTCGCT+TGG | + | tig0019430:31659-31678 | None:intergenic | 45.0% |
AAGCGAGGTGGTTTCAAATC+AGG | - | tig0019430:31658-31677 | Msa1373350:CDS | 45.0% | |
! | GACAGATGAAGGTTTTGCCA+AGG | - | tig0019430:31781-31800 | Msa1373350:CDS | 45.0% |
AGATGGCTTAGTGAGTGAGA+CGG | - | tig0019430:31895-31914 | Msa1373350:CDS | 45.0% | |
! | GTTGTTGTTGCTGCTGAGAT+TGG | + | tig0019430:30494-30513 | None:intergenic | 45.0% |
TCATCATCTTCATCTGCGGT+TGG | + | tig0019430:30536-30555 | None:intergenic | 45.0% | |
ATTATTACTTCGTCCCGGCT+TGG | + | tig0019430:30706-30725 | None:intergenic | 45.0% | |
GCGACAAGCGCAAAGATATT+AGG | - | tig0019430:30754-30773 | Msa1373350:CDS | 45.0% | |
TGTAACTCGTGAAGAGTAGG+TGG | + | tig0019430:30831-30850 | None:intergenic | 45.0% | |
TACCACCGGATTTCTTAGCA+CGG | + | tig0019430:30953-30972 | None:intergenic | 45.0% | |
! | TCTCCTTCTAGGGAGATGTT+GGG | - | tig0019430:31032-31051 | Msa1373350:CDS | 45.0% |
GGTCCATGAAGGGTTTGATT+AGG | - | tig0019430:31093-31112 | Msa1373350:CDS | 45.0% | |
CAGCCTAATCAAACCCTTCA+TGG | + | tig0019430:31099-31118 | None:intergenic | 45.0% | |
GATGATGAAGATGAGGAGGA+TGG | - | tig0019430:31131-31150 | Msa1373350:CDS | 45.0% | |
!!! | GAGGGAGCGTCTTTTCTTAA+TGG | - | tig0019430:31343-31362 | Msa1373350:CDS | 45.0% |
CTTAATGGAGAGGGAGTTAG+GGG | - | tig0019430:31358-31377 | Msa1373350:CDS | 45.0% | |
GTTTCTTGAGAGGCAAAACC+AGG | - | tig0019430:31400-31419 | Msa1373350:CDS | 45.0% | |
TAACATCTTCAACCACAGCC+TGG | + | tig0019430:31421-31440 | None:intergenic | 45.0% | |
! | AATGAGGAAGTGGTGGAGAA+TGG | - | tig0019430:31440-31459 | Msa1373350:CDS | 45.0% |
! | ATGAGGAAGTGGTGGAGAAT+GGG | - | tig0019430:31441-31460 | Msa1373350:CDS | 45.0% |
! | GATGGAGTATCAGAAGCTGA+AGG | - | tig0019430:31602-31621 | Msa1373350:CDS | 45.0% |
! | TGATTTGAAACCACCTCGCT+TGG | + | tig0019430:31659-31678 | None:intergenic | 45.0% |
AAGCGAGGTGGTTTCAAATC+AGG | - | tig0019430:31658-31677 | Msa1373350:CDS | 45.0% | |
! | GACAGATGAAGGTTTTGCCA+AGG | - | tig0019430:31781-31800 | Msa1373350:CDS | 45.0% |
AGATGGCTTAGTGAGTGAGA+CGG | - | tig0019430:31895-31914 | Msa1373350:CDS | 45.0% | |
GGAGGAGGATTCATCATCTG+AGG | + | tig0019430:30450-30469 | None:intergenic | 50.0% | |
TTAATTACCTGAGGAGGCGG+AGG | + | tig0019430:30468-30487 | None:intergenic | 50.0% | |
!! | GGTTGGTGAGAGAGTAACTG+AGG | + | tig0019430:30519-30538 | None:intergenic | 50.0% |
CCACGATTCTGGGTCATCAT+CGG | + | tig0019430:30588-30607 | None:intergenic | 50.0% | |
ATGATGACCCAGAATCGTGG+TGG | - | tig0019430:30588-30607 | Msa1373350:CDS | 50.0% | |
!! | TTCGTCCCGGCTTGGAATTA+AGG | + | tig0019430:30698-30717 | None:intergenic | 50.0% |
ACTCGTGAAGAGTAGGTGGT+TGG | + | tig0019430:30827-30846 | None:intergenic | 50.0% | |
! | GATTTGCTCCTTATGCCCCT+AGG | - | tig0019430:30907-30926 | Msa1373350:CDS | 50.0% |
! | GTGGTATTCCTAGGGGCATA+AGG | + | tig0019430:30918-30937 | None:intergenic | 50.0% |
ATCCGTGCTAAGAAATCCGG+TGG | - | tig0019430:30948-30967 | Msa1373350:CDS | 50.0% | |
!! | AATAGGTGTAGGAAGCACCG+CGG | + | tig0019430:31009-31028 | None:intergenic | 50.0% |
! | GTCTCCTTCTAGGGAGATGT+TGG | - | tig0019430:31031-31050 | Msa1373350:CDS | 50.0% |
TCTCCCAACATCTCCCTAGA+AGG | + | tig0019430:31038-31057 | None:intergenic | 50.0% | |
TAGGGAGATGTTGGGAGACA+TGG | - | tig0019430:31040-31059 | Msa1373350:CDS | 50.0% | |
AGACATGGCCAAGGAAGAGT+GGG | - | tig0019430:31055-31074 | Msa1373350:CDS | 50.0% | |
GATGGTTACGGGTCCATGAA+GGG | - | tig0019430:31083-31102 | Msa1373350:CDS | 50.0% | |
GATGAAGATGAGGAGGATGG+TGG | - | tig0019430:31134-31153 | Msa1373350:CDS | 50.0% | |
! | ATGAGGAGGATGGTGGTAGT+GGG | - | tig0019430:31141-31160 | Msa1373350:CDS | 50.0% |
GAGTGATGTGGAGGAACATG+TGG | - | tig0019430:31172-31191 | Msa1373350:CDS | 50.0% | |
TGATGTGGAGGAACATGTGG+AGG | - | tig0019430:31175-31194 | Msa1373350:CDS | 50.0% | |
GGCTTGACCAAGATTTGAGC+AGG | - | tig0019430:31207-31226 | Msa1373350:CDS | 50.0% | |
!! | GGAGGATGCTGTTTCTTGAG+AGG | - | tig0019430:31390-31409 | Msa1373350:CDS | 50.0% |
GGGTCTGATGTTCCTGTCAT+GGG | - | tig0019430:31485-31504 | Msa1373350:CDS | 50.0% | |
GGAGGAGGATTCATCATCTG+AGG | + | tig0019430:30450-30469 | None:intergenic | 50.0% | |
TTAATTACCTGAGGAGGCGG+AGG | + | tig0019430:30468-30487 | None:intergenic | 50.0% | |
!! | GGTTGGTGAGAGAGTAACTG+AGG | + | tig0019430:30519-30538 | None:intergenic | 50.0% |
CCACGATTCTGGGTCATCAT+CGG | + | tig0019430:30588-30607 | None:intergenic | 50.0% | |
ATGATGACCCAGAATCGTGG+TGG | - | tig0019430:30588-30607 | Msa1373350:CDS | 50.0% | |
!! | TTCGTCCCGGCTTGGAATTA+AGG | + | tig0019430:30698-30717 | None:intergenic | 50.0% |
ACTCGTGAAGAGTAGGTGGT+TGG | + | tig0019430:30827-30846 | None:intergenic | 50.0% | |
! | GATTTGCTCCTTATGCCCCT+AGG | - | tig0019430:30907-30926 | Msa1373350:CDS | 50.0% |
! | GTGGTATTCCTAGGGGCATA+AGG | + | tig0019430:30918-30937 | None:intergenic | 50.0% |
ATCCGTGCTAAGAAATCCGG+TGG | - | tig0019430:30948-30967 | Msa1373350:CDS | 50.0% | |
!! | AATAGGTGTAGGAAGCACCG+CGG | + | tig0019430:31009-31028 | None:intergenic | 50.0% |
! | GTCTCCTTCTAGGGAGATGT+TGG | - | tig0019430:31031-31050 | Msa1373350:CDS | 50.0% |
TCTCCCAACATCTCCCTAGA+AGG | + | tig0019430:31038-31057 | None:intergenic | 50.0% | |
TAGGGAGATGTTGGGAGACA+TGG | - | tig0019430:31040-31059 | Msa1373350:CDS | 50.0% | |
AGACATGGCCAAGGAAGAGT+GGG | - | tig0019430:31055-31074 | Msa1373350:CDS | 50.0% | |
GATGGTTACGGGTCCATGAA+GGG | - | tig0019430:31083-31102 | Msa1373350:CDS | 50.0% | |
GATGAAGATGAGGAGGATGG+TGG | - | tig0019430:31134-31153 | Msa1373350:CDS | 50.0% | |
! | ATGAGGAGGATGGTGGTAGT+GGG | - | tig0019430:31141-31160 | Msa1373350:CDS | 50.0% |
GAGTGATGTGGAGGAACATG+TGG | - | tig0019430:31172-31191 | Msa1373350:CDS | 50.0% | |
TGATGTGGAGGAACATGTGG+AGG | - | tig0019430:31175-31194 | Msa1373350:CDS | 50.0% | |
GGCTTGACCAAGATTTGAGC+AGG | - | tig0019430:31207-31226 | Msa1373350:CDS | 50.0% | |
!! | GGAGGATGCTGTTTCTTGAG+AGG | - | tig0019430:31390-31409 | Msa1373350:CDS | 50.0% |
GGGTCTGATGTTCCTGTCAT+GGG | - | tig0019430:31485-31504 | Msa1373350:CDS | 50.0% | |
TTCTGGGTCATCATCGGAGG+AGG | + | tig0019430:30582-30601 | None:intergenic | 55.0% | |
CGATTCTGGGTCATCATCGG+AGG | + | tig0019430:30585-30604 | None:intergenic | 55.0% | |
CCGATGATGACCCAGAATCG+TGG | - | tig0019430:30585-30604 | Msa1373350:CDS | 55.0% | |
GTCTCAACAGCAGCTTCCTC+TGG | - | tig0019430:30629-30648 | Msa1373350:CDS | 55.0% | |
CACGAGCGATGCAATACCAC+CGG | + | tig0019430:30967-30986 | None:intergenic | 55.0% | |
!! | ATAGGTGTAGGAAGCACCGC+GGG | + | tig0019430:31008-31027 | None:intergenic | 55.0% |
GATGTTGGGAGACATGGCCA+AGG | - | tig0019430:31046-31065 | Msa1373350:CDS | 55.0% | |
GAGACATGGCCAAGGAAGAG+TGG | - | tig0019430:31054-31073 | Msa1373350:CDS | 55.0% | |
GACATGGCCAAGGAAGAGTG+GGG | - | tig0019430:31056-31075 | Msa1373350:CDS | 55.0% | |
ATCCACACCCCACTCTTCCT+TGG | + | tig0019430:31066-31085 | None:intergenic | 55.0% | |
AAGGAAGAGTGGGGTGTGGA+TGG | - | tig0019430:31065-31084 | Msa1373350:CDS | 55.0% | |
GAGTGGGGTGTGGATGGTTA+CGG | - | tig0019430:31071-31090 | Msa1373350:CDS | 55.0% | |
AGTGGGGTGTGGATGGTTAC+GGG | - | tig0019430:31072-31091 | Msa1373350:CDS | 55.0% | |
GGATGGTTACGGGTCCATGA+AGG | - | tig0019430:31082-31101 | Msa1373350:CDS | 55.0% | |
! | GATGAGGAGGATGGTGGTAG+TGG | - | tig0019430:31140-31159 | Msa1373350:CDS | 55.0% |
TGGGTCGAGTGAGAGTGATG+TGG | - | tig0019430:31160-31179 | Msa1373350:CDS | 55.0% | |
GTCGAGTGAGAGTGATGTGG+AGG | - | tig0019430:31163-31182 | Msa1373350:CDS | 55.0% | |
TGTGGAGGAACATGTGGAGG+TGG | - | tig0019430:31178-31197 | Msa1373350:CDS | 55.0% | |
AGGAACATGTGGAGGTGGAG+AGG | - | tig0019430:31183-31202 | Msa1373350:CDS | 55.0% | |
AACATGTGGAGGTGGAGAGG+AGG | - | tig0019430:31186-31205 | Msa1373350:CDS | 55.0% | |
AGTTAGGGGATCTGCGAAGG+AGG | - | tig0019430:31372-31391 | Msa1373350:CDS | 55.0% | |
TGAGAGGCAAAACCAGGCTG+TGG | - | tig0019430:31406-31425 | Msa1373350:CDS | 55.0% | |
GGGGTCTGATGTTCCTGTCA+TGG | - | tig0019430:31484-31503 | Msa1373350:CDS | 55.0% | |
GGAAGAGTCTGTTCCAAGCG+AGG | - | tig0019430:31643-31662 | Msa1373350:CDS | 55.0% | |
AGAGTCTGTTCCAAGCGAGG+TGG | - | tig0019430:31646-31665 | Msa1373350:CDS | 55.0% | |
TTCTGGGTCATCATCGGAGG+AGG | + | tig0019430:30582-30601 | None:intergenic | 55.0% | |
CGATTCTGGGTCATCATCGG+AGG | + | tig0019430:30585-30604 | None:intergenic | 55.0% | |
CCGATGATGACCCAGAATCG+TGG | - | tig0019430:30585-30604 | Msa1373350:CDS | 55.0% | |
GTCTCAACAGCAGCTTCCTC+TGG | - | tig0019430:30629-30648 | Msa1373350:CDS | 55.0% | |
CACGAGCGATGCAATACCAC+CGG | + | tig0019430:30967-30986 | None:intergenic | 55.0% | |
!! | ATAGGTGTAGGAAGCACCGC+GGG | + | tig0019430:31008-31027 | None:intergenic | 55.0% |
GATGTTGGGAGACATGGCCA+AGG | - | tig0019430:31046-31065 | Msa1373350:CDS | 55.0% | |
GAGACATGGCCAAGGAAGAG+TGG | - | tig0019430:31054-31073 | Msa1373350:CDS | 55.0% | |
GACATGGCCAAGGAAGAGTG+GGG | - | tig0019430:31056-31075 | Msa1373350:CDS | 55.0% | |
ATCCACACCCCACTCTTCCT+TGG | + | tig0019430:31066-31085 | None:intergenic | 55.0% | |
AAGGAAGAGTGGGGTGTGGA+TGG | - | tig0019430:31065-31084 | Msa1373350:CDS | 55.0% | |
GAGTGGGGTGTGGATGGTTA+CGG | - | tig0019430:31071-31090 | Msa1373350:CDS | 55.0% | |
AGTGGGGTGTGGATGGTTAC+GGG | - | tig0019430:31072-31091 | Msa1373350:CDS | 55.0% | |
GGATGGTTACGGGTCCATGA+AGG | - | tig0019430:31082-31101 | Msa1373350:CDS | 55.0% | |
! | GATGAGGAGGATGGTGGTAG+TGG | - | tig0019430:31140-31159 | Msa1373350:CDS | 55.0% |
TGGGTCGAGTGAGAGTGATG+TGG | - | tig0019430:31160-31179 | Msa1373350:CDS | 55.0% | |
GTCGAGTGAGAGTGATGTGG+AGG | - | tig0019430:31163-31182 | Msa1373350:CDS | 55.0% | |
TGTGGAGGAACATGTGGAGG+TGG | - | tig0019430:31178-31197 | Msa1373350:CDS | 55.0% | |
AGGAACATGTGGAGGTGGAG+AGG | - | tig0019430:31183-31202 | Msa1373350:CDS | 55.0% | |
AACATGTGGAGGTGGAGAGG+AGG | - | tig0019430:31186-31205 | Msa1373350:CDS | 55.0% | |
AGTTAGGGGATCTGCGAAGG+AGG | - | tig0019430:31372-31391 | Msa1373350:CDS | 55.0% | |
TGAGAGGCAAAACCAGGCTG+TGG | - | tig0019430:31406-31425 | Msa1373350:CDS | 55.0% | |
GGGGTCTGATGTTCCTGTCA+TGG | - | tig0019430:31484-31503 | Msa1373350:CDS | 55.0% | |
GGAAGAGTCTGTTCCAAGCG+AGG | - | tig0019430:31643-31662 | Msa1373350:CDS | 55.0% | |
AGAGTCTGTTCCAAGCGAGG+TGG | - | tig0019430:31646-31665 | Msa1373350:CDS | 55.0% | |
ATTACCTGAGGAGGCGGAGG+AGG | + | tig0019430:30465-30484 | None:intergenic | 60.0% | |
TGGGTCATCATCGGAGGAGG+AGG | + | tig0019430:30579-30598 | None:intergenic | 60.0% | |
ACCTTGTCCTGTGACTCCCG+CGG | - | tig0019430:30989-31008 | Msa1373350:CDS | 60.0% | |
GGGAGTTAGGGGATCTGCGA+AGG | - | tig0019430:31369-31388 | Msa1373350:CDS | 60.0% | |
ATTACCTGAGGAGGCGGAGG+AGG | + | tig0019430:30465-30484 | None:intergenic | 60.0% | |
TGGGTCATCATCGGAGGAGG+AGG | + | tig0019430:30579-30598 | None:intergenic | 60.0% | |
ACCTTGTCCTGTGACTCCCG+CGG | - | tig0019430:30989-31008 | Msa1373350:CDS | 60.0% | |
GGGAGTTAGGGGATCTGCGA+AGG | - | tig0019430:31369-31388 | Msa1373350:CDS | 60.0% | |
GAATCCTCCTCCGCCTCCTC+AGG | - | tig0019430:30458-30477 | Msa1373350:CDS | 65.0% | |
ACCGCGGGAGTCACAGGACA+AGG | + | tig0019430:30993-31012 | None:intergenic | 65.0% | |
GGCCAAGGAAGAGTGGGGTG+TGG | - | tig0019430:31061-31080 | Msa1373350:CDS | 65.0% | |
GAATCCTCCTCCGCCTCCTC+AGG | - | tig0019430:30458-30477 | Msa1373350:CDS | 65.0% | |
ACCGCGGGAGTCACAGGACA+AGG | + | tig0019430:30993-31012 | None:intergenic | 65.0% | |
GGCCAAGGAAGAGTGGGGTG+TGG | - | tig0019430:31061-31080 | Msa1373350:CDS | 65.0% | |
!! | GGAAGCACCGCGGGAGTCAC+AGG | + | tig0019430:30999-31018 | None:intergenic | 70.0% |
!! | GGAAGCACCGCGGGAGTCAC+AGG | + | tig0019430:30999-31018 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0019430 | gene | 30399 | 31991 | 30399 | ID=Msa1373350;Name=Msa1373350 |
tig0019430 | mRNA | 30399 | 31991 | 30399 | ID=Msa1373350-mRNA-1;Parent=Msa1373350;Name=Msa1373350-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|530 |
tig0019430 | exon | 30399 | 31991 | 30399 | ID=Msa1373350-mRNA-1:exon:3309;Parent=Msa1373350-mRNA-1 |
tig0019430 | CDS | 30399 | 31991 | 30399 | ID=Msa1373350-mRNA-1:cds;Parent=Msa1373350-mRNA-1 |
Gene Sequence |
Protein sequence |