Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0652080 | RHN62264.1 | 89.633 | 463 | 11 | 4 | 1 | 428 | 1 | 461 | 0.0 | 819 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0652080 | sp|O52225|DPO1_THEFI | 40.526 | 190 | 104 | 4 | 157 | 343 | 65 | 248 | 1.89e-35 | 142 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044250 | Msa0652080 | 0.811332 | 7.380652e-51 | -8.615850e-47 |
| Msa0051600 | Msa0652080 | 0.807510 | 4.880165e-50 | -8.615850e-47 |
| Msa0073820 | Msa0652080 | 0.805637 | 1.212497e-49 | -8.615850e-47 |
| Msa0092390 | Msa0652080 | 0.804126 | 2.508337e-49 | -8.615850e-47 |
| Msa0094700 | Msa0652080 | 0.821072 | 4.902691e-53 | -8.615850e-47 |
| Msa0112290 | Msa0652080 | 0.810795 | 9.652415e-51 | -8.615850e-47 |
| Msa0652080 | Msa0790180 | 0.815860 | 7.445389e-52 | -8.615850e-47 |
| Msa0652080 | Msa0864150 | 0.811797 | 5.848450e-51 | -8.615850e-47 |
| Msa0652080 | Msa0878330 | 0.828676 | 7.873911e-55 | -8.615850e-47 |
| Msa0652080 | Msa0901140 | 0.821615 | 3.674422e-53 | -8.615850e-47 |
| Msa0652080 | Msa0902810 | 0.802842 | 4.629748e-49 | -8.615850e-47 |
| Msa0652080 | Msa0968010 | 0.829687 | 4.477631e-55 | -8.615850e-47 |
| Msa0652080 | Msa1011210 | 0.810252 | 1.264420e-50 | -8.615850e-47 |
| Msa0652080 | Msa1011240 | 0.812197 | 4.785667e-51 | -8.615850e-47 |
| Msa0652080 | Msa1194300 | 0.821579 | 3.746397e-53 | -8.615850e-47 |
| Msa0652080 | Msa1194330 | 0.824954 | 6.100131e-54 | -8.615850e-47 |
| Msa0652080 | Msa1198870 | 0.817887 | 2.611508e-52 | -8.615850e-47 |
| Msa0652080 | Msa1222580 | 0.800596 | 1.338150e-48 | -8.615850e-47 |
| Msa0652080 | Msa1234960 | 0.814701 | 1.347108e-51 | -8.615850e-47 |
| Msa0652080 | Msa1254990 | 0.801160 | 1.026604e-48 | -8.615850e-47 |
| Msa0652080 | Msa1257520 | 0.806803 | 6.889538e-50 | -8.615850e-47 |
| Msa0652080 | Msa1293060 | 0.824584 | 7.458576e-54 | -8.615850e-47 |
| Msa0652080 | Msa1422900 | 0.833112 | 6.429218e-56 | -8.615850e-47 |
| Msa0139050 | Msa0652080 | 0.815465 | 9.118486e-52 | -8.615850e-47 |
| Msa0170680 | Msa0652080 | 0.800184 | 1.623679e-48 | -8.615850e-47 |
| Msa0173850 | Msa0652080 | 0.802062 | 6.704085e-49 | -8.615850e-47 |
| Msa0175280 | Msa0652080 | 0.807030 | 6.167797e-50 | -8.615850e-47 |
| Msa0183170 | Msa0652080 | 0.806724 | 7.157598e-50 | -8.615850e-47 |
| Msa0197900 | Msa0652080 | 0.806529 | 7.868542e-50 | -8.615850e-47 |
| Msa0365110 | Msa0652080 | 0.812028 | 5.209996e-51 | -8.615850e-47 |
| Msa0379390 | Msa0652080 | 0.801222 | 9.970345e-49 | -8.615850e-47 |
| Msa0379450 | Msa0652080 | 0.804910 | 1.721957e-49 | -8.615850e-47 |
| Msa0383110 | Msa0652080 | 0.803801 | 2.930427e-49 | -8.615850e-47 |
| Msa0426480 | Msa0652080 | 0.800459 | 1.426778e-48 | -8.615850e-47 |
| Msa0427090 | Msa0652080 | 0.806187 | 9.292637e-50 | -8.615850e-47 |
| Msa0473490 | Msa0652080 | 0.800135 | 1.660998e-48 | -8.615850e-47 |
| Msa0258380 | Msa0652080 | 0.828770 | 7.475716e-55 | -8.615850e-47 |
| Msa0258410 | Msa0652080 | 0.826331 | 2.877386e-54 | -8.615850e-47 |
| Msa0266010 | Msa0652080 | 0.800486 | 1.409183e-48 | -8.615850e-47 |
| Msa0282070 | Msa0652080 | 0.849554 | 3.002133e-60 | -8.615850e-47 |
| Msa0282090 | Msa0652080 | 0.848700 | 5.186341e-60 | -8.615850e-47 |
| Msa0302660 | Msa0652080 | 0.800471 | 1.418951e-48 | -8.615850e-47 |
| Msa0303950 | Msa0652080 | 0.821368 | 4.191246e-53 | -8.615850e-47 |
| Msa0335740 | Msa0652080 | 0.807917 | 3.998277e-50 | -8.615850e-47 |
| Msa0524570 | Msa0652080 | 0.806131 | 9.544935e-50 | -8.615850e-47 |
| Msa0553350 | Msa0652080 | 0.816012 | 6.886920e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0652080 | MtrunA17_Chr4g0045531 | 89.633 | 463 | 11 | 4 | 1 | 428 | 1 | 461 | 0.0 | 819 |
| Msa0652080 | MtrunA17_Chr6g0462421 | 29.082 | 196 | 111 | 5 | 160 | 332 | 108 | 298 | 1.65e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0652080 | AT3G52050.2 | 57.461 | 449 | 130 | 8 | 10 | 427 | 5 | 423 | 3.82e-162 | 463 |
| Msa0652080 | AT3G52050.1 | 57.461 | 449 | 130 | 8 | 10 | 427 | 5 | 423 | 3.82e-162 | 463 |
| Msa0652080 | AT3G52050.3 | 57.461 | 449 | 130 | 8 | 10 | 427 | 28 | 446 | 1.27e-161 | 463 |
| Msa0652080 | AT3G52050.4 | 56.570 | 449 | 122 | 10 | 10 | 427 | 5 | 411 | 7.33e-156 | 447 |
| Msa0652080 | AT3G52050.8 | 55.679 | 449 | 120 | 9 | 10 | 427 | 5 | 405 | 1.38e-152 | 438 |
| Msa0652080 | AT3G52050.7 | 55.679 | 449 | 120 | 9 | 10 | 427 | 5 | 405 | 1.38e-152 | 438 |
| Msa0652080 | AT3G52050.6 | 55.457 | 449 | 121 | 8 | 10 | 427 | 28 | 428 | 2.86e-152 | 439 |
| Msa0652080 | AT3G52050.5 | 55.742 | 357 | 99 | 8 | 10 | 335 | 28 | 356 | 3.02e-115 | 342 |
| Msa0652080 | AT1G34380.3 | 28.108 | 185 | 119 | 6 | 160 | 332 | 120 | 302 | 1.93e-12 | 68.6 |
| Msa0652080 | AT1G34380.2 | 28.108 | 185 | 119 | 6 | 160 | 332 | 120 | 302 | 3.71e-12 | 67.8 |
Find 138 sgRNAs with CRISPR-Local
Find 767 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGGATATGATTGCACTTTC+TGG | 0.151527 | 4_3:-59780476 | Msa0652080:CDS |
| GTTCTTTGTAGAATTTATTT+AGG | 0.234277 | 4_3:-59776427 | Msa0652080:three_prime_UTR |
| CTTGCAGATTATTGATGTTC+TGG | 0.236084 | 4_3:-59785237 | Msa0652080:intron |
| GCAGCTCCGTAACTAATTTC+TGG | 0.255837 | 4_3:+59786862 | None:intergenic |
| GTGAAGTTCATTGAGATATC+AGG | 0.263990 | 4_3:-59777243 | Msa0652080:exon |
| TCTACAAAGAACCATCAATT+TGG | 0.280858 | 4_3:+59776438 | None:intergenic |
| GTGCAATTGATCAGTAAATT+TGG | 0.302237 | 4_3:-59779705 | Msa0652080:intron |
| TTTGTACATACAGGAGTTAA+TGG | 0.317174 | 4_3:-59779747 | Msa0652080:intron |
| TAATACGATCCTCTTTGATT+TGG | 0.320846 | 4_3:+59778316 | None:intergenic |
| TGTTTGAAGGCCAGAACTTT+AGG | 0.328926 | 4_3:-59782110 | Msa0652080:intron |
| TACTCCTGATACCATTGTTC+AGG | 0.336956 | 4_3:-59782049 | Msa0652080:CDS |
| AAGCACTGATAGCTGTTAAA+AGG | 0.346617 | 4_3:+59777336 | None:intergenic |
| GAAGATGGGCATTGGGTAGA+AGG | 0.353507 | 4_3:+59776296 | None:intergenic |
| GTGCAATCATATCCACAAAC+TGG | 0.353594 | 4_3:+59780483 | None:intergenic |
| TAGAGCAGAGATACTTAAAA+TGG | 0.355097 | 4_3:-59777209 | Msa0652080:three_prime_UTR |
| CTCAATAGGATGGTTTCGTT+TGG | 0.356859 | 4_3:-59780548 | Msa0652080:intron |
| TGCAGTTTCAGTGTCGGAAC+CGG | 0.359337 | 4_3:+59787316 | None:intergenic |
| CATACAGGAGTTAATGGAAT+TGG | 0.360524 | 4_3:-59779741 | Msa0652080:intron |
| ATAGATTGTGCCTAAAGTTC+TGG | 0.365868 | 4_3:+59782100 | None:intergenic |
| GAGGACTTTGCAGAGCGATT+TGG | 0.367514 | 4_3:-59780521 | Msa0652080:CDS |
| AAAATGGAGCATGTCAATAC+TGG | 0.370290 | 4_3:-59777193 | Msa0652080:three_prime_UTR |
| TTCATTAAATGATAGGTTCC+AGG | 0.372126 | 4_3:-59781918 | Msa0652080:intron |
| GACAGATCTGATAATATTCC+AGG | 0.374957 | 4_3:-59780452 | Msa0652080:intron |
| AAGAGAACGCGCGTTTGAAA+TGG | 0.386894 | 4_3:+59787279 | None:intergenic |
| GAATTGTTCTAAACAAGAAA+TGG | 0.388059 | 4_3:+59787161 | None:intergenic |
| TGAAGTGACAATAGCTCTAC+TGG | 0.389140 | 4_3:-59776354 | Msa0652080:three_prime_UTR |
| GTATCATTTGTGGGAAAAGT+TGG | 0.390864 | 4_3:-59777273 | Msa0652080:CDS |
| CTAGCACATGCCGATGGAAA+TGG | 0.412460 | 4_3:-59786049 | Msa0652080:CDS |
| ATGCCGATGGAAATGGAGAT+TGG | 0.416221 | 4_3:-59786042 | Msa0652080:CDS |
| CACCACGTGGAGCAAGTCTT+AGG | 0.416399 | 4_3:+59781403 | None:intergenic |
| TGAATGCGACGGAGAGGAAA+TGG | 0.423423 | 4_3:+59787139 | None:intergenic |
| TGTGGGAAAAGTTGGATTCA+AGG | 0.423479 | 4_3:-59777265 | Msa0652080:CDS |
| CCCAGCATCAACACTCCTTA+AGG | 0.425425 | 4_3:+59781863 | None:intergenic |
| TGATACACTCTCCTGATGAT+AGG | 0.425535 | 4_3:+59777290 | None:intergenic |
| GAATTAAGAGTCTGACGAAA+TGG | 0.427805 | 4_3:+59783239 | None:intergenic |
| AGTCCCTGAACAATGGTATC+AGG | 0.428886 | 4_3:+59782045 | None:intergenic |
| TGATTGGAACATTAGCCTTA+AGG | 0.432237 | 4_3:-59781878 | Msa0652080:CDS |
| TTCTTTCTACTCTATTCAAA+TGG | 0.432437 | 4_3:-59787221 | Msa0652080:exon |
| GGTTATGTATGCCAAATTGA+TGG | 0.435393 | 4_3:-59776449 | Msa0652080:three_prime_UTR |
| AAGGGCATTGGGTAGAAGTT+AGG | 0.436950 | 4_3:+59776315 | None:intergenic |
| TGGCCTTGATGGATGCTTTG+AGG | 0.438000 | 4_3:+59782016 | None:intergenic |
| GGAGGCACCGTTCCGGTGGT+TGG | 0.438122 | 4_3:+59786883 | None:intergenic |
| GTAGTTTCCGGCGGCGGTGG+TGG | 0.438249 | 4_3:+59787111 | None:intergenic |
| AGAGTAGTTTCCGGCGGCGG+TGG | 0.442752 | 4_3:+59787108 | None:intergenic |
| GGCTATATTAAGCAAGGAAC+TGG | 0.443781 | 4_3:-59778052 | Msa0652080:CDS |
| GAATAGAGTAGAAAGAATAA+TGG | 0.444397 | 4_3:+59787227 | None:intergenic |
| AATTTCTGGAGGCACCGTTC+CGG | 0.448299 | 4_3:+59786876 | None:intergenic |
| AAAACTGCAAGAGTAGTTTC+CGG | 0.453028 | 4_3:+59787099 | None:intergenic |
| AGGCACATTGGAGAAGTTGT+TGG | 0.456254 | 4_3:-59778349 | Msa0652080:CDS |
| GCAGTTTCAGTGTCGGAACC+GGG | 0.458805 | 4_3:+59787317 | None:intergenic |
| GTTTCCGGCGGCGGTGGTGG+TGG | 0.459018 | 4_3:+59787114 | None:intergenic |
| CGTGAAGAACGAAGAAGGTT+TGG | 0.460304 | 4_3:+59787070 | None:intergenic |
| CAGGAGAGTGTATCATTTGT+GGG | 0.465284 | 4_3:-59777282 | Msa0652080:CDS |
| GGCATTGGGTAGAAGGGCAT+TGG | 0.468351 | 4_3:+59776303 | None:intergenic |
| CTTAACTGAAAATGCTGAGC+AGG | 0.470819 | 4_3:-59778073 | Msa0652080:CDS |
| TCTGAAACCATCCCAGTTTG+TGG | 0.473588 | 4_3:-59780495 | Msa0652080:CDS |
| TGCCGATGGAAATGGAGATT+GGG | 0.481773 | 4_3:-59786041 | Msa0652080:CDS |
| GCCTTAAGGAGTGTTGATGC+TGG | 0.485198 | 4_3:-59781864 | Msa0652080:CDS |
| GAAATGGGAGTGAAGAAAGA+AGG | 0.487122 | 4_3:+59787177 | None:intergenic |
| GACTTTGCAGAGCGATTTGG+AGG | 0.488400 | 4_3:-59780518 | Msa0652080:CDS |
| TCAGGAGAGTGTATCATTTG+TGG | 0.491632 | 4_3:-59777283 | Msa0652080:CDS |
| AATCCCCTCATGTTGTATTG+TGG | 0.492535 | 4_3:+59777168 | None:intergenic |
| TCTTTGGATTCACATAAAGA+TGG | 0.492913 | 4_3:-59786925 | Msa0652080:CDS |
| GGCATTGAAGTTAAACGCTA+TGG | 0.501724 | 4_3:+59787248 | None:intergenic |
| AATTGTTCTAAACAAGAAAT+GGG | 0.504361 | 4_3:+59787162 | None:intergenic |
| CAAAGAGGATCGTATTAGAA+AGG | 0.504847 | 4_3:-59778310 | Msa0652080:intron |
| TTTCAGCTGATCCTATCATC+AGG | 0.505189 | 4_3:-59777301 | Msa0652080:CDS |
| AATTTGATATCTTACCATCA+TGG | 0.513196 | 4_3:+59785017 | None:intergenic |
| TGAAGTTCATTGAGATATCA+GGG | 0.520672 | 4_3:-59777242 | Msa0652080:three_prime_UTR |
| GCAAGAGTAGTTTCCGGCGG+CGG | 0.525379 | 4_3:+59787105 | None:intergenic |
| GGACGATTGCTCTTGTACGC+AGG | 0.526137 | 4_3:+59782075 | None:intergenic |
| CGCATGATGCAAATGGTAGT+AGG | 0.527441 | 4_3:-59776390 | Msa0652080:three_prime_UTR |
| TTTAGAACGCATGATGCAAA+TGG | 0.529050 | 4_3:-59776397 | Msa0652080:three_prime_UTR |
| TTCTGGAGGCACCGTTCCGG+TGG | 0.532696 | 4_3:+59786879 | None:intergenic |
| GCTATCAGTGCTTACGCAGA+AGG | 0.547320 | 4_3:-59777326 | Msa0652080:CDS |
| GAAGTTAAACGCTATGGCAT+GGG | 0.549488 | 4_3:+59787254 | None:intergenic |
| GTGAATGGTACCATGTAGGA+TGG | 0.550198 | 4_3:+59777881 | None:intergenic |
| TGAAGTTAAACGCTATGGCA+TGG | 0.551018 | 4_3:+59787253 | None:intergenic |
| GATGGTTTCGTTTGGAGCTG+AGG | 0.553880 | 4_3:-59780540 | Msa0652080:CDS |
| AGTTTCAGTGTCGGAACCGG+GGG | 0.553886 | 4_3:+59787319 | None:intergenic |
| CCTTAAGGAGTGTTGATGCT+GGG | 0.554132 | 4_3:-59781863 | Msa0652080:CDS |
| GCATTGGGTAGAAGGGCATT+GGG | 0.554556 | 4_3:+59776304 | None:intergenic |
| GTGCCTCCAGAAATTAGTTA+CGG | 0.556767 | 4_3:-59786868 | Msa0652080:CDS |
| TACAGTGAATGGTACCATGT+AGG | 0.557179 | 4_3:+59777877 | None:intergenic |
| GTAGAAGCAGATGATGTGAT+TGG | 0.557576 | 4_3:-59781894 | Msa0652080:CDS |
| ATTCATTCCTTCCCATGTGG+TGG | 0.559114 | 4_3:-59785213 | Msa0652080:intron |
| CAGTTTCAGTGTCGGAACCG+GGG | 0.560029 | 4_3:+59787318 | None:intergenic |
| AAGATGGGCATTGGGTAGAA+GGG | 0.562610 | 4_3:+59776297 | None:intergenic |
| ACATCATCTGCTTCTACACC+TGG | 0.562883 | 4_3:+59781900 | None:intergenic |
| ACTCCTGATACCATTGTTCA+GGG | 0.563327 | 4_3:-59782048 | Msa0652080:CDS |
| CACACCACCACCACCGCCGC+CGG | 0.568933 | 4_3:-59787118 | Msa0652080:CDS |
| TCTGCAACTTCTCCAACCAC+CGG | 0.572776 | 4_3:-59786895 | Msa0652080:CDS |
| GTGCGCGTGAAGAACGAAGA+AGG | 0.572912 | 4_3:+59787065 | None:intergenic |
| TTGTGATCTCCCATCCTACA+TGG | 0.573874 | 4_3:-59777891 | Msa0652080:CDS |
| CAAAGCATCCATCAAGGCCA+TGG | 0.574954 | 4_3:-59782013 | Msa0652080:CDS |
| GACGATTGCTCTTGTACGCA+GGG | 0.578661 | 4_3:+59782076 | None:intergenic |
| ACTTATTTGAATAGGCACAT+TGG | 0.579686 | 4_3:-59778361 | Msa0652080:intron |
| CTTTGTAGAATTTATTTAGG+TGG | 0.579937 | 4_3:-59776424 | Msa0652080:three_prime_UTR |
| TTCACGCGCACCACTCTCCA+AGG | 0.580932 | 4_3:-59787053 | Msa0652080:intron |
| AAACATACCACCACATGGGA+AGG | 0.581300 | 4_3:+59785206 | None:intergenic |
| GAGTGTTGATGCTGGGTACA+AGG | 0.582786 | 4_3:-59781856 | Msa0652080:intron |
| TGCAATCATATCCACAAACT+GGG | 0.587318 | 4_3:+59780484 | None:intergenic |
| AACCCAATCTCCATTTCCAT+CGG | 0.588128 | 4_3:+59786039 | None:intergenic |
| TGAACAATGGTATCAGGAGT+AGG | 0.591744 | 4_3:+59782051 | None:intergenic |
| CAGGTAGTGTTTGACCATGA+TGG | 0.597006 | 4_3:-59785031 | Msa0652080:intron |
| AACTTCTCCAACCACCGGAA+CGG | 0.599945 | 4_3:-59786890 | Msa0652080:CDS |
| GGGAGTGAAGAAAGAAGGAG+TGG | 0.600096 | 4_3:+59787182 | None:intergenic |
| TGGAACCACAATACAACATG+AGG | 0.600754 | 4_3:-59777173 | Msa0652080:three_prime_UTR |
| GGTAACAGAACCAATGTGCA+CGG | 0.607886 | 4_3:+59786834 | None:intergenic |
| GGAATTCATTCCTTCCCATG+TGG | 0.611125 | 4_3:-59785216 | Msa0652080:CDS |
| GCTGCTCAACCCGTGCACAT+TGG | 0.615289 | 4_3:-59786844 | Msa0652080:intron |
| ATCATATCCACAAACTGGGA+TGG | 0.619113 | 4_3:+59780488 | None:intergenic |
| ATCTGTTGACCAAATCAAAG+AGG | 0.622060 | 4_3:-59778325 | Msa0652080:CDS |
| GGAACCACAATACAACATGA+GGG | 0.622101 | 4_3:-59777172 | Msa0652080:three_prime_UTR |
| GGTCATCTAGCACATGCCGA+TGG | 0.627959 | 4_3:-59786055 | Msa0652080:CDS |
| ATACCTCAAAGCATCCATCA+AGG | 0.628176 | 4_3:-59782019 | Msa0652080:CDS |
| GGACAAAACATACCACCACA+TGG | 0.628503 | 4_3:+59785201 | None:intergenic |
| TGAATGGTACCATGTAGGAT+GGG | 0.629221 | 4_3:+59777882 | None:intergenic |
| GTAACAGAACCAATGTGCAC+GGG | 0.641689 | 4_3:+59786835 | None:intergenic |
| GTGTACACTGTACAGGACAA+TGG | 0.645776 | 4_3:-59777374 | Msa0652080:intron |
| GAAGTGACAATAGCTCTACT+GGG | 0.648239 | 4_3:-59776353 | Msa0652080:three_prime_UTR |
| TCTCTTGTTTACTAAACCCG+AGG | 0.649424 | 4_3:-59777849 | Msa0652080:intron |
| TGAGCAGGCTATATTAAGCA+AGG | 0.650855 | 4_3:-59778058 | Msa0652080:CDS |
| TGGTGGTGGTGTGAATGCGA+CGG | 0.653487 | 4_3:+59787128 | None:intergenic |
| ACAATGGTATCAGGAGTAGG+AGG | 0.659704 | 4_3:+59782054 | None:intergenic |
| GTATTGAAGTCCCTGAACAA+TGG | 0.660032 | 4_3:+59782038 | None:intergenic |
| CTCCTAAGACTTGCTCCACG+TGG | 0.661892 | 4_3:-59781405 | Msa0652080:CDS |
| GACAAAACATACCACCACAT+GGG | 0.676208 | 4_3:+59785202 | None:intergenic |
| GCTCCGTAACTAATTTCTGG+AGG | 0.677777 | 4_3:+59786865 | None:intergenic |
| GTTTCAGTGTCGGAACCGGG+GGG | 0.686032 | 4_3:+59787320 | None:intergenic |
| TTGATAGCAAAATTGCACCA+TGG | 0.689907 | 4_3:-59786076 | Msa0652080:intron |
| GAGTGTGTTACCTTGGAGAG+TGG | 0.691852 | 4_3:+59787043 | None:intergenic |
| GAACCACAATACAACATGAG+GGG | 0.699718 | 4_3:-59777171 | Msa0652080:three_prime_UTR |
| CGGCATGTGCTAGATGACCA+TGG | 0.709874 | 4_3:+59786059 | None:intergenic |
| GTGGTGTGAATGCGACGGAG+AGG | 0.721831 | 4_3:+59787133 | None:intergenic |
| ACTGCAAGAGTAGTTTCCGG+CGG | 0.728227 | 4_3:+59787102 | None:intergenic |
| AGTCTTAGGAGACGTAACGA+CGG | 0.740227 | 4_3:+59781417 | None:intergenic |
| GATACTAACTGATCACCACG+TGG | 0.760957 | 4_3:+59781390 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTATAAACTATTCT+TGG | - | chr4_3:59777957-59777976 | Msa0652080:intron | 10.0% |
| !! | ATATGACAAAAAAAAAATTA+AGG | + | chr4_3:59779552-59779571 | None:intergenic | 10.0% |
| !!! | TTTTTTAACAAAAAAATAAC+AGG | - | chr4_3:59779825-59779844 | Msa0652080:intron | 10.0% |
| !! | ATATATAACTACAATATAAA+GGG | + | chr4_3:59780521-59780540 | None:intergenic | 10.0% |
| !! | AAAAAATTAAATACACAAAT+AGG | + | chr4_3:59780808-59780827 | None:intergenic | 10.0% |
| !!! | ATTTGTGTATTTAATTTTTT+TGG | - | chr4_3:59780808-59780827 | Msa0652080:intron | 10.0% |
| !! | ATATAAATTCATTAAATGAT+AGG | - | chr4_3:59781710-59781729 | Msa0652080:intron | 10.0% |
| !!! | ATTTTTCTTAAAATTTGTAA+AGG | + | chr4_3:59781861-59781880 | None:intergenic | 10.0% |
| !! | TTTAATAAGTATTTAATACT+TGG | - | chr4_3:59783859-59783878 | Msa0652080:intron | 10.0% |
| !! | TTAATAAGTATTTAATACTT+GGG | - | chr4_3:59783860-59783879 | Msa0652080:intron | 10.0% |
| !!! | AAATTTACATTTATATTTTC+TGG | + | chr4_3:59784997-59785016 | None:intergenic | 10.0% |
| !!! | TTTTAAATATAATCTATAGT+TGG | + | chr4_3:59785886-59785905 | None:intergenic | 10.0% |
| !! | ATAAAAATTATCTTGAATCA+AGG | + | chr4_3:59777947-59777966 | None:intergenic | 15.0% |
| !!! | AAATATGATAATTTTTAGTG+TGG | - | chr4_3:59778299-59778318 | Msa0652080:intron | 15.0% |
| !!! | AATCTTTTTACAATGTTTTT+TGG | + | chr4_3:59778881-59778900 | None:intergenic | 15.0% |
| !! | TTACAATAAAAAAGATATTG+AGG | - | chr4_3:59779053-59779072 | Msa0652080:intron | 15.0% |
| !!! | TTTTTCAACAACAAAAAATA+CGG | - | chr4_3:59779431-59779450 | Msa0652080:intron | 15.0% |
| !! | TTCAAGTAAAATCTTAATAA+AGG | - | chr4_3:59780351-59780370 | Msa0652080:intron | 15.0% |
| !! | TATATAACTACAATATAAAG+GGG | + | chr4_3:59780520-59780539 | None:intergenic | 15.0% |
| !! | CATATATAACTACAATATAA+AGG | + | chr4_3:59780522-59780541 | None:intergenic | 15.0% |
| !!! | ACATAATTATGATTTTTTTG+AGG | + | chr4_3:59781162-59781181 | None:intergenic | 15.0% |
| !! | TGTATTACATGAAAAATTAT+TGG | - | chr4_3:59782569-59782588 | Msa0652080:intron | 15.0% |
| !!! | AAATTGAAAATGTTTTTGAA+AGG | + | chr4_3:59782711-59782730 | None:intergenic | 15.0% |
| !! | TATAATGCTATATATTGTAT+AGG | + | chr4_3:59783506-59783525 | None:intergenic | 15.0% |
| !! | CATAGTAATCATATTAAATA+AGG | + | chr4_3:59785417-59785436 | None:intergenic | 15.0% |
| !!! | ATTTGAATTTGAATACTTTT+TGG | - | chr4_3:59786043-59786062 | Msa0652080:CDS | 15.0% |
| !!! | TTTGAATTTGAATACTTTTT+GGG | - | chr4_3:59786044-59786063 | Msa0652080:CDS | 15.0% |
| !!! | AATTGTTCTAAACAAGAAAT+GGG | + | chr4_3:59776476-59776495 | None:intergenic | 20.0% |
| !!! | ATGCATTATTGTTTTTGTTA+TGG | - | chr4_3:59776908-59776927 | Msa0652080:intron | 20.0% |
| !!! | CATCTTTTTAATTTTTCTGA+TGG | + | chr4_3:59777150-59777169 | None:intergenic | 20.0% |
| !!! | ACTTGTTTGATAAACTTTTT+GGG | - | chr4_3:59777410-59777429 | Msa0652080:intron | 20.0% |
| !! | GAAAAACCAATAAAAATAAG+AGG | + | chr4_3:59777485-59777504 | None:intergenic | 20.0% |
| !!! | TTTTATTGGTTTTTCGTATT+TGG | - | chr4_3:59777490-59777509 | Msa0652080:intron | 20.0% |
| !!! | TTTATTGGTTTTTCGTATTT+GGG | - | chr4_3:59777491-59777510 | Msa0652080:intron | 20.0% |
| !!! | GGAAAAATATTAACTTTTTC+TGG | - | chr4_3:59777840-59777859 | Msa0652080:intron | 20.0% |
| !!! | TTATCTTTTTAACCAAAGTT+GGG | + | chr4_3:59777884-59777903 | None:intergenic | 20.0% |
| !! | AAATATACTAGCAAATATAG+AGG | + | chr4_3:59778647-59778666 | None:intergenic | 20.0% |
| !! | TCAATAAAAGAATCCTAATT+TGG | + | chr4_3:59778858-59778877 | None:intergenic | 20.0% |
| !! | TATCTCATAACTTAATGATT+GGG | + | chr4_3:59779993-59780012 | None:intergenic | 20.0% |
| !! | TTATCTCATAACTTAATGAT+TGG | + | chr4_3:59779994-59780013 | None:intergenic | 20.0% |
| !! | AAAACAATGTGTTAAAAACA+AGG | + | chr4_3:59781464-59781483 | None:intergenic | 20.0% |
| !!! | TAAAATTTGTAAAGGTACAT+CGG | + | chr4_3:59781853-59781872 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTTTTTCCTCAAT+AGG | - | chr4_3:59783073-59783092 | Msa0652080:intron | 20.0% |
| !! | AAAAAGATAGAAAGGATAAA+TGG | + | chr4_3:59783458-59783477 | None:intergenic | 20.0% |
| !! | ATTATTGGAAAAAGATAGAA+AGG | + | chr4_3:59783466-59783485 | None:intergenic | 20.0% |
| !!! | ATTAGTCTTGTTGAAATTAT+TGG | + | chr4_3:59783481-59783500 | None:intergenic | 20.0% |
| !! | AATGACATTGTTGAAATTTA+AGG | + | chr4_3:59784863-59784882 | None:intergenic | 20.0% |
| !!! | AATGTAACCATTTTTTCTTT+TGG | - | chr4_3:59785046-59785065 | Msa0652080:intron | 20.0% |
| !! | TTGAATGACTAACATTATAT+TGG | - | chr4_3:59785123-59785142 | Msa0652080:intron | 20.0% |
| !! | TTCTACATGATTTGATTATT+TGG | + | chr4_3:59785184-59785203 | None:intergenic | 20.0% |
| !! | TATACTGTATATGATATTAG+TGG | - | chr4_3:59785475-59785494 | Msa0652080:intron | 20.0% |
| !! | AAATGTAAATTGCAGTTTAA+AGG | + | chr4_3:59785686-59785705 | None:intergenic | 20.0% |
| !!! | TTTTTAATTAGTTTTTGGCA+TGG | - | chr4_3:59785848-59785867 | Msa0652080:intron | 20.0% |
| !!! | ACATGATTTTTATTTTGGAT+CGG | + | chr4_3:59786602-59786621 | None:intergenic | 20.0% |
| !! | AAAAATTAAATGTTGCACTT+TGG | + | chr4_3:59786718-59786737 | None:intergenic | 20.0% |
| !!! | AGAATTAAAATCTACTTTTG+CGG | - | chr4_3:59786950-59786969 | Msa0652080:intron | 20.0% |
| !! | GTTCTTTGTAGAATTTATTT+AGG | - | chr4_3:59787208-59787227 | Msa0652080:exon | 20.0% |
| ! | GAATAGAGTAGAAAGAATAA+TGG | + | chr4_3:59776411-59776430 | None:intergenic | 25.0% |
| ! | TTCTTTCTACTCTATTCAAA+TGG | - | chr4_3:59776414-59776433 | Msa0652080:three_prime_UTR | 25.0% |
| !! | GAATTGTTCTAAACAAGAAA+TGG | + | chr4_3:59776477-59776496 | None:intergenic | 25.0% |
| !!! | TAATGTCTTCTAGAATGTTT+TGG | - | chr4_3:59777331-59777350 | Msa0652080:CDS | 25.0% |
| ! | CCAACATAATTAAAATTCAC+AGG | + | chr4_3:59777389-59777408 | None:intergenic | 25.0% |
| !!! | CCTGTGAATTTTAATTATGT+TGG | - | chr4_3:59777386-59777405 | Msa0652080:intron | 25.0% |
| !! | CACTTGTTTGATAAACTTTT+TGG | - | chr4_3:59777409-59777428 | Msa0652080:intron | 25.0% |
| ! | AACCAATAAAAATAAGAGGA+AGG | + | chr4_3:59777481-59777500 | None:intergenic | 25.0% |
| !!! | TTATTGGTTTTTCGTATTTG+GGG | - | chr4_3:59777492-59777511 | Msa0652080:intron | 25.0% |
| ! | TTCGCAAAAATTTATGATCA+TGG | - | chr4_3:59777692-59777711 | Msa0652080:intron | 25.0% |
| !!! | ATGATCATGGATCAATTTTT+TGG | - | chr4_3:59777705-59777724 | Msa0652080:intron | 25.0% |
| ! | ATAACAACATCAAAGAAACA+AGG | + | chr4_3:59777762-59777781 | None:intergenic | 25.0% |
| !! | CTTATCTTTTTAACCAAAGT+TGG | + | chr4_3:59777885-59777904 | None:intergenic | 25.0% |
| ! | TTTACATTGAAGAAACTTTG+CGG | - | chr4_3:59778178-59778197 | Msa0652080:intron | 25.0% |
| ! | AATTTGATATCTTACCATCA+TGG | + | chr4_3:59778621-59778640 | None:intergenic | 25.0% |
| ! | ATTACCATGAAAGATCAAAT+AGG | + | chr4_3:59778675-59778694 | None:intergenic | 25.0% |
| !! | ATGGTCTTAATCAAAACATA+AGG | + | chr4_3:59778821-59778840 | None:intergenic | 25.0% |
| ! | CATCAGTAAACACTTATTAT+AGG | - | chr4_3:59779008-59779027 | Msa0652080:intron | 25.0% |
| !! | AAAGCGATTAAAACAGTTTT+TGG | - | chr4_3:59779127-59779146 | Msa0652080:intron | 25.0% |
| !! | AAGCGATTAAAACAGTTTTT+GGG | - | chr4_3:59779128-59779147 | Msa0652080:intron | 25.0% |
| !!! | ATAGGTACTTTCACATTTTT+TGG | + | chr4_3:59779183-59779202 | None:intergenic | 25.0% |
| ! | TTCTTAAGTTAATCAAAAGC+TGG | - | chr4_3:59779269-59779288 | Msa0652080:intron | 25.0% |
| ! | CAACATAAGTACAGTTAATA+CGG | - | chr4_3:59779301-59779320 | Msa0652080:intron | 25.0% |
| !! | GCAAATATAATAATTTGTCG+TGG | - | chr4_3:59779479-59779498 | Msa0652080:intron | 25.0% |
| !! | TTTTACAGAACAAACAACAA+TGG | - | chr4_3:59779799-59779818 | Msa0652080:intron | 25.0% |
| ! | TTTACAGAACAAACAACAAT+GGG | - | chr4_3:59779800-59779819 | Msa0652080:intron | 25.0% |
| ! | AGAAGACAAATATATATGAC+AGG | - | chr4_3:59779948-59779967 | Msa0652080:intron | 25.0% |
| ! | GAAGACAAATATATATGACA+GGG | - | chr4_3:59779949-59779968 | Msa0652080:intron | 25.0% |
| !! | TTGATTTTTAACCTAGCTAA+AGG | + | chr4_3:59780023-59780042 | None:intergenic | 25.0% |
| ! | TAGGTTAAAAATCAAAGAGA+TGG | - | chr4_3:59780028-59780047 | Msa0652080:intron | 25.0% |
| ! | AGGTTAAAAATCAAAGAGAT+GGG | - | chr4_3:59780029-59780048 | Msa0652080:intron | 25.0% |
| ! | TTACATAAACTCAATATCCT+TGG | + | chr4_3:59780139-59780158 | None:intergenic | 25.0% |
| ! | ATCAATGAATATAGTGTCAT+AGG | - | chr4_3:59780170-59780189 | Msa0652080:intron | 25.0% |
| !! | AAACAAAGTTTTACTGCTAA+AGG | - | chr4_3:59780423-59780442 | Msa0652080:intron | 25.0% |
| ! | ATTGTAGTTATATATGCACA+AGG | - | chr4_3:59780526-59780545 | Msa0652080:CDS | 25.0% |
| ! | TTGTAGTTATATATGCACAA+GGG | - | chr4_3:59780527-59780546 | Msa0652080:CDS | 25.0% |
| ! | GACAGGTTATTTATTGAAAA+AGG | - | chr4_3:59780652-59780671 | Msa0652080:intron | 25.0% |
| ! | TAGACTATATGAACATCAAA+AGG | + | chr4_3:59780921-59780940 | None:intergenic | 25.0% |
| !! | TTTTGATGTTCATATAGTCT+AGG | - | chr4_3:59780920-59780939 | Msa0652080:intron | 25.0% |
| ! | CAATAAAAATGAGAAAGAAC+AGG | + | chr4_3:59781195-59781214 | None:intergenic | 25.0% |
| ! | TAATGATGCTTTGATTCAAT+TGG | - | chr4_3:59781334-59781353 | Msa0652080:intron | 25.0% |
| !! | ATACTTAATACTGTGTTTTG+TGG | - | chr4_3:59781370-59781389 | Msa0652080:intron | 25.0% |
| ! | TAAAAACAAGGTCAAAGAAT+CGG | + | chr4_3:59781452-59781471 | None:intergenic | 25.0% |
| ! | GTCTTTAATAGTTTCAAGAT+AGG | - | chr4_3:59781806-59781825 | Msa0652080:intron | 25.0% |
| ! | TAATAGTTTCAAGATAGGAA+TGG | - | chr4_3:59781811-59781830 | Msa0652080:intron | 25.0% |
| !! | ATAGTAGTACACTTTTCATT+TGG | + | chr4_3:59781898-59781917 | None:intergenic | 25.0% |
| ! | TTAGTATCAGACTTAATTTC+TGG | - | chr4_3:59782260-59782279 | Msa0652080:intron | 25.0% |
| ! | AAGTTTAGAGATTAATGAGT+TGG | - | chr4_3:59782437-59782456 | Msa0652080:intron | 25.0% |
| ! | GTTCTATCATAAACCATATT+TGG | + | chr4_3:59782465-59782484 | None:intergenic | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | - | chr4_3:59782469-59782488 | Msa0652080:intron | 25.0% |
| ! | AAAGATATGAAAAACTCATG+TGG | - | chr4_3:59782768-59782787 | Msa0652080:intron | 25.0% |
| ! | TGTAATAGAGAGAATATAGA+AGG | - | chr4_3:59782799-59782818 | Msa0652080:intron | 25.0% |
| !! | AACAATGACAACATTGTTTT+TGG | - | chr4_3:59782849-59782868 | Msa0652080:intron | 25.0% |
| ! | TATTGTAAAAGAAAATGCTG+AGG | - | chr4_3:59782903-59782922 | Msa0652080:intron | 25.0% |
| ! | ATTGTAAAAGAAAATGCTGA+GGG | - | chr4_3:59782904-59782923 | Msa0652080:intron | 25.0% |
| ! | TCTCATATGTTTATTAGTTG+AGG | - | chr4_3:59782944-59782963 | Msa0652080:intron | 25.0% |
| ! | CTCATATGTTTATTAGTTGA+GGG | - | chr4_3:59782945-59782964 | Msa0652080:intron | 25.0% |
| ! | TTTATTAGTTGAGGGAAAAA+AGG | - | chr4_3:59782953-59782972 | Msa0652080:intron | 25.0% |
| ! | AAAAAGGAGAACATGAAAAA+TGG | - | chr4_3:59782969-59782988 | Msa0652080:intron | 25.0% |
| ! | AAAAGGAGAACATGAAAAAT+GGG | - | chr4_3:59782970-59782989 | Msa0652080:intron | 25.0% |
| ! | GATTACAATCAAACAAGTAA+AGG | + | chr4_3:59783007-59783026 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTCCTCAATAGGA+TGG | - | chr4_3:59783077-59783096 | Msa0652080:intron | 25.0% |
| ! | TCATAAAATGATGTTCCAAA+GGG | + | chr4_3:59783224-59783243 | None:intergenic | 25.0% |
| ! | TTCATAAAATGATGTTCCAA+AGG | + | chr4_3:59783225-59783244 | None:intergenic | 25.0% |
| ! | ACATGAGTAAAAATTGAACA+AGG | - | chr4_3:59783245-59783264 | Msa0652080:CDS | 25.0% |
| !!! | TGATTACCTATTGATTTCAA+AGG | + | chr4_3:59783326-59783345 | None:intergenic | 25.0% |
| ! | ATCAGATCTGTTAGTATATT+AGG | - | chr4_3:59783342-59783361 | Msa0652080:intron | 25.0% |
| !!! | ATTAGAAGTCTTATTATGTC+AGG | - | chr4_3:59783375-59783394 | Msa0652080:intron | 25.0% |
| !! | AGATTTTACAAATAGGGTAT+TGG | + | chr4_3:59783429-59783448 | None:intergenic | 25.0% |
| !! | CAGAACAGATTTTACAAATA+GGG | + | chr4_3:59783435-59783454 | None:intergenic | 25.0% |
| ! | GTAATGATGATTCATTAGTT+TGG | + | chr4_3:59783766-59783785 | None:intergenic | 25.0% |
| ! | CCATACTTGACTATATATTT+AGG | + | chr4_3:59783788-59783807 | None:intergenic | 25.0% |
| ! | CCTAAATATATAGTCAAGTA+TGG | - | chr4_3:59783785-59783804 | Msa0652080:intron | 25.0% |
| ! | TTCACTAGTAAATAATGTTC+TGG | - | chr4_3:59783980-59783999 | Msa0652080:intron | 25.0% |
| !! | TACTCTTTTCTTTCTGTTTT+TGG | - | chr4_3:59784336-59784355 | Msa0652080:intron | 25.0% |
| !!! | TTGATAAGAGTCTTTTAAAG+AGG | - | chr4_3:59784531-59784550 | Msa0652080:intron | 25.0% |
| !! | TTGATAAGAGTCTTATAAAG+AGG | - | chr4_3:59784792-59784811 | Msa0652080:intron | 25.0% |
| ! | TCCTTCTGTAATCAAATAAT+TGG | - | chr4_3:59784895-59784914 | Msa0652080:intron | 25.0% |
| ! | CCTTCTGTAATCAAATAATT+GGG | - | chr4_3:59784896-59784915 | Msa0652080:intron | 25.0% |
| ! | GTATAGGTACAATTAATATG+TGG | + | chr4_3:59784966-59784985 | None:intergenic | 25.0% |
| ! | CATATTAATTGTACCTATAC+TGG | - | chr4_3:59784966-59784985 | Msa0652080:intron | 25.0% |
| ! | AAATGAGCCAAAAGAAAAAA+TGG | + | chr4_3:59785056-59785075 | None:intergenic | 25.0% |
| !!! | CTCATTTTCTTTTTGCTATT+TGG | - | chr4_3:59785069-59785088 | Msa0652080:intron | 25.0% |
| ! | TAGTTTCCAAAACAATACTA+AGG | + | chr4_3:59785102-59785121 | None:intergenic | 25.0% |
| ! | ATGACTAACATTATATTGGA+TGG | - | chr4_3:59785127-59785146 | Msa0652080:intron | 25.0% |
| ! | AATGGTTAAAATGTTCTCAT+TGG | - | chr4_3:59785380-59785399 | Msa0652080:intron | 25.0% |
| ! | TGCAAAAAAAATCACAATGT+CGG | + | chr4_3:59785527-59785546 | None:intergenic | 25.0% |
| !!! | TTTTTTGCAATTTTCTTTGC+AGG | - | chr4_3:59785538-59785557 | Msa0652080:intron | 25.0% |
| !! | AGAGTGTTTAAAATTATGAC+AGG | - | chr4_3:59785711-59785730 | Msa0652080:intron | 25.0% |
| ! | CTGAATTCATAATTGTACTT+TGG | - | chr4_3:59786130-59786149 | Msa0652080:intron | 25.0% |
| ! | AATAAACTTCCGTAAATGTT+TGG | - | chr4_3:59786182-59786201 | Msa0652080:intron | 25.0% |
| ! | TTACAATGTTAGATGTATTG+TGG | + | chr4_3:59786232-59786251 | None:intergenic | 25.0% |
| ! | TCCAAAATAAAAATCATGTG+CGG | - | chr4_3:59786603-59786622 | Msa0652080:intron | 25.0% |
| ! | CAAAATAAACCGCATATATT+TGG | + | chr4_3:59786678-59786697 | None:intergenic | 25.0% |
| !! | CAAATATATGCGGTTTATTT+TGG | - | chr4_3:59786676-59786695 | Msa0652080:intron | 25.0% |
| ! | CACATGCATAGAAAAATAAT+AGG | - | chr4_3:59786757-59786776 | Msa0652080:intron | 25.0% |
| ! | CAAACACATCCAAAAATATT+CGG | - | chr4_3:59787051-59787070 | Msa0652080:intron | 25.0% |
| !!! | CAAAAATATTCGGTTTTTTG+CGG | - | chr4_3:59787061-59787080 | Msa0652080:CDS | 25.0% |
| !!! | GCGATGAAAACATTTTTTTT+TGG | - | chr4_3:59787165-59787184 | Msa0652080:CDS | 25.0% |
| ! | CTTTGTAGAATTTATTTAGG+TGG | - | chr4_3:59787211-59787230 | Msa0652080:exon | 25.0% |
| CGAAAGAAGAATAAAAAGCA+CGG | + | chr4_3:59776645-59776664 | None:intergenic | 30.0% | |
| TCTTTGGATTCACATAAAGA+TGG | - | chr4_3:59776710-59776729 | Msa0652080:intron | 30.0% | |
| !! | GTTTTTGTTATGGTCATGTT+TGG | - | chr4_3:59776918-59776937 | Msa0652080:intron | 30.0% |
| TACTTTGCTGCTGATAAATT+TGG | - | chr4_3:59777444-59777463 | Msa0652080:intron | 30.0% | |
| !!! | TGCCTTCCTCTTATTTTTAT+TGG | - | chr4_3:59777476-59777495 | Msa0652080:intron | 30.0% |
| !! | ATTTTGCTATCAAACCAATG+TGG | + | chr4_3:59777552-59777571 | None:intergenic | 30.0% |
| TATTCTGATCTCTGATATGA+AGG | - | chr4_3:59777779-59777798 | Msa0652080:intron | 30.0% | |
| ATTCTGATCTCTGATATGAA+GGG | - | chr4_3:59777780-59777799 | Msa0652080:intron | 30.0% | |
| ATTCAGAAAAGTCTTGATGA+GGG | + | chr4_3:59777815-59777834 | None:intergenic | 30.0% | |
| AATTCAGAAAAGTCTTGATG+AGG | + | chr4_3:59777816-59777835 | None:intergenic | 30.0% | |
| ! | CAAGACTTTTCTGAATTTTG+TGG | - | chr4_3:59777819-59777838 | Msa0652080:intron | 30.0% |
| AAGTTGGGCATTAAAATTAG+TGG | + | chr4_3:59777869-59777888 | None:intergenic | 30.0% | |
| !! | CTAATTTTAATGCCCAACTT+TGG | - | chr4_3:59777869-59777888 | Msa0652080:CDS | 30.0% |
| TCTTGGAATGAAAATTTGTG+AGG | - | chr4_3:59777974-59777993 | Msa0652080:intron | 30.0% | |
| GACAAATGGTTTACATGATA+AGG | + | chr4_3:59778012-59778031 | None:intergenic | 30.0% | |
| ! | TTTTTGTCCTCAATCAAGAA+AGG | - | chr4_3:59778203-59778222 | Msa0652080:intron | 30.0% |
| ! | TTTTTCTCCTTTCTTGATTG+AGG | + | chr4_3:59778213-59778232 | None:intergenic | 30.0% |
| TCATGCAAATCAATGCATAA+TGG | + | chr4_3:59778458-59778477 | None:intergenic | 30.0% | |
| TGTGAGGATGACAAATTTAA+AGG | + | chr4_3:59778494-59778513 | None:intergenic | 30.0% | |
| ! | TTTTCACACAGATAAATGTG+AGG | + | chr4_3:59778510-59778529 | None:intergenic | 30.0% |
| TATACTAGCAAATATAGAGG+CGG | + | chr4_3:59778644-59778663 | None:intergenic | 30.0% | |
| !!! | TGTTTTGATTAAGACCATGT+TGG | - | chr4_3:59778823-59778842 | Msa0652080:intron | 30.0% |
| !! | TTGGTTTTCTGAACCAAATT+AGG | - | chr4_3:59778842-59778861 | Msa0652080:intron | 30.0% |
| AATGACAATATAGATGCTGT+GGG | - | chr4_3:59778920-59778939 | Msa0652080:intron | 30.0% | |
| GTAAACACTTATTATAGGAG+AGG | - | chr4_3:59779013-59779032 | Msa0652080:intron | 30.0% | |
| !! | GTTGTTTCTATAAGCTATCT+TGG | - | chr4_3:59779093-59779112 | Msa0652080:intron | 30.0% |
| GAAATGCATTTCCAACTTTA+GGG | + | chr4_3:59779252-59779271 | None:intergenic | 30.0% | |
| AGAAATGCATTTCCAACTTT+AGG | + | chr4_3:59779253-59779272 | None:intergenic | 30.0% | |
| TGTTGAAAAAAACATCGAAG+TGG | + | chr4_3:59779421-59779440 | None:intergenic | 30.0% | |
| AAAAAAATTAAGGCCAAGTC+TGG | + | chr4_3:59779542-59779561 | None:intergenic | 30.0% | |
| ACAGAAAAGATAGTTCACTT+CGG | + | chr4_3:59779752-59779771 | None:intergenic | 30.0% | |
| GTACTAATGCATTCATATTG+TGG | - | chr4_3:59779904-59779923 | Msa0652080:intron | 30.0% | |
| TAACTATTGATGCTTTCCAA+GGG | + | chr4_3:59780065-59780084 | None:intergenic | 30.0% | |
| TTAACTATTGATGCTTTCCA+AGG | + | chr4_3:59780066-59780085 | None:intergenic | 30.0% | |
| AACTCAATATCCTTGGTTAT+CGG | + | chr4_3:59780132-59780151 | None:intergenic | 30.0% | |
| AATGAATATAGTGTCATAGG+AGG | - | chr4_3:59780173-59780192 | Msa0652080:intron | 30.0% | |
| GAAATGTAAGTTAGACTCTA+GGG | + | chr4_3:59780301-59780320 | None:intergenic | 30.0% | |
| AGAAATGTAAGTTAGACTCT+AGG | + | chr4_3:59780302-59780321 | None:intergenic | 30.0% | |
| ! | AAGATTTTACTTGAACAGAG+AGG | + | chr4_3:59780346-59780365 | None:intergenic | 30.0% |
| ! | AAAGGAATCCTTTTCATTTC+AGG | - | chr4_3:59780369-59780388 | Msa0652080:intron | 30.0% |
| ATGGAATTCCTGAAATGAAA+AGG | + | chr4_3:59780380-59780399 | None:intergenic | 30.0% | |
| AGGGGTTTAAATTCTGATAT+AGG | + | chr4_3:59780502-59780521 | None:intergenic | 30.0% | |
| !! | CAGTTCTTTAATTTTGTCAG+AGG | - | chr4_3:59780607-59780626 | Msa0652080:intron | 30.0% |
| CGATACTGTTATCATAACTT+GGG | + | chr4_3:59780633-59780652 | None:intergenic | 30.0% | |
| TCGATACTGTTATCATAACT+TGG | + | chr4_3:59780634-59780653 | None:intergenic | 30.0% | |
| GGTCAAAGTGAATTTATTTG+GGG | + | chr4_3:59780837-59780856 | None:intergenic | 30.0% | |
| GGGTCAAAGTGAATTTATTT+GGG | + | chr4_3:59780838-59780857 | None:intergenic | 30.0% | |
| AGGGTCAAAGTGAATTTATT+TGG | + | chr4_3:59780839-59780858 | None:intergenic | 30.0% | |
| ATAGTCTAGGCTAATTCATT+CGG | - | chr4_3:59780933-59780952 | Msa0652080:intron | 30.0% | |
| GATAATAATCTCAACTGCTT+TGG | - | chr4_3:59780995-59781014 | Msa0652080:intron | 30.0% | |
| !!! | ATTTTTTTGAGGCAACAAGA+GGG | + | chr4_3:59781151-59781170 | None:intergenic | 30.0% |
| TTCTAAGCAGATAGATATTG+TGG | + | chr4_3:59781246-59781265 | None:intergenic | 30.0% | |
| ATCTATCTGCTTAGAATTGT+AGG | - | chr4_3:59781250-59781269 | Msa0652080:intron | 30.0% | |
| AAAAACAAGGTCAAAGAATC+GGG | + | chr4_3:59781451-59781470 | None:intergenic | 30.0% | |
| TTCATTAAATGATAGGTTCC+AGG | - | chr4_3:59781717-59781736 | Msa0652080:intron | 30.0% | |
| AAGTGTTATGTCATAACGAA+CGG | + | chr4_3:59781955-59781974 | None:intergenic | 30.0% | |
| ATGAACTCTGTTACTGAAAA+GGG | - | chr4_3:59782009-59782028 | Msa0652080:CDS | 30.0% | |
| AGAGACAATCATTAGTGAAA+GGG | + | chr4_3:59782141-59782160 | None:intergenic | 30.0% | |
| AAGAGACAATCATTAGTGAA+AGG | + | chr4_3:59782142-59782161 | None:intergenic | 30.0% | |
| TCTGAAAAAAGTCTTTGTCT+GGG | + | chr4_3:59782190-59782209 | None:intergenic | 30.0% | |
| ATCTGAAAAAAGTCTTTGTC+TGG | + | chr4_3:59782191-59782210 | None:intergenic | 30.0% | |
| ATGTACTAGCTAATGATTTC+TGG | - | chr4_3:59782292-59782311 | Msa0652080:intron | 30.0% | |
| AACTCAGAAAGTAGTAGAAA+CGG | + | chr4_3:59782408-59782427 | None:intergenic | 30.0% | |
| ACTACTTTCTGAGTTCTATT+AGG | - | chr4_3:59782413-59782432 | Msa0652080:intron | 30.0% | |
| ! | TAATGAGTTGGATCCAAATA+TGG | - | chr4_3:59782449-59782468 | Msa0652080:intron | 30.0% |
| TTATTGGTACAACCATATAC+TGG | - | chr4_3:59782585-59782604 | Msa0652080:intron | 30.0% | |
| CATGAAAAATGGGAAGTAAA+CGG | - | chr4_3:59782980-59782999 | Msa0652080:intron | 30.0% | |
| ! | AACTACTTTGTTACTTGGAA+CGG | + | chr4_3:59783032-59783051 | None:intergenic | 30.0% |
| GAGTAAACTACTTTGTTACT+TGG | + | chr4_3:59783037-59783056 | None:intergenic | 30.0% | |
| ! | GCAGAACAGATTTTACAAAT+AGG | + | chr4_3:59783436-59783455 | None:intergenic | 30.0% |
| GATAGACTAAAGTTTAAGTC+CGG | - | chr4_3:59783583-59783602 | Msa0652080:intron | 30.0% | |
| TTCCTGAAATTTACACGTAA+TGG | - | chr4_3:59783606-59783625 | Msa0652080:intron | 30.0% | |
| TCCTGAAATTTACACGTAAT+GGG | - | chr4_3:59783607-59783626 | Msa0652080:intron | 30.0% | |
| ACAACTAATTGAAGTGTACA+AGG | - | chr4_3:59783646-59783665 | Msa0652080:intron | 30.0% | |
| CAACTAATTGAAGTGTACAA+GGG | - | chr4_3:59783647-59783666 | Msa0652080:intron | 30.0% | |
| !!! | GAATCACTGTTTTGTTTTCA+GGG | - | chr4_3:59783807-59783826 | Msa0652080:intron | 30.0% |
| !!! | AATCACTGTTTTGTTTTCAG+GGG | - | chr4_3:59783808-59783827 | Msa0652080:intron | 30.0% |
| TTTGTACATACAGGAGTTAA+TGG | - | chr4_3:59783888-59783907 | Msa0652080:intron | 30.0% | |
| GTGCAATTGATCAGTAAATT+TGG | - | chr4_3:59783930-59783949 | Msa0652080:intron | 30.0% | |
| ! | ATTGATCAGTAAATTTGGTG+AGG | - | chr4_3:59783935-59783954 | Msa0652080:intron | 30.0% |
| TTATTATGCACCCCTTATAT+TGG | - | chr4_3:59784166-59784185 | Msa0652080:intron | 30.0% | |
| CTTATAACTGAATGTTGATG+TGG | - | chr4_3:59784234-59784253 | Msa0652080:intron | 30.0% | |
| ! | AGAAAAGAGTATACACAGAT+AGG | + | chr4_3:59784327-59784346 | None:intergenic | 30.0% |
| ! | TGTATTTTCTGTATGTCTGT+TGG | - | chr4_3:59784386-59784405 | Msa0652080:intron | 30.0% |
| !! | ATAAGAGTCTTTTAAAGAGG+AGG | - | chr4_3:59784534-59784553 | Msa0652080:intron | 30.0% |
| ! | ATAAGAGTCTTATAAAGAGG+AGG | - | chr4_3:59784795-59784814 | Msa0652080:intron | 30.0% |
| CCCAATTATTTGATTACAGA+AGG | + | chr4_3:59784899-59784918 | None:intergenic | 30.0% | |
| ! | GCAGAAATATATGCAGTTTT+TGG | + | chr4_3:59785025-59785044 | None:intergenic | 30.0% |
| AATGTGCCTATTCAAATAAG+TGG | + | chr4_3:59785275-59785294 | None:intergenic | 30.0% | |
| ACTTATTTGAATAGGCACAT+TGG | - | chr4_3:59785274-59785293 | Msa0652080:intron | 30.0% | |
| TAATACGATCCTCTTTGATT+TGG | + | chr4_3:59785322-59785341 | None:intergenic | 30.0% | |
| GGGTAAAGTTATTCATGTAA+TGG | - | chr4_3:59785362-59785381 | Msa0652080:intron | 30.0% | |
| TACAGTATAGTTTCGAACAA+GGG | + | chr4_3:59785464-59785483 | None:intergenic | 30.0% | |
| ATACAGTATAGTTTCGAACA+AGG | + | chr4_3:59785465-59785484 | None:intergenic | 30.0% | |
| ! | AAGAGATCTTTTACAGTGAA+TGG | + | chr4_3:59785772-59785791 | None:intergenic | 30.0% |
| TTGAAAATTCAAACTGCCTT+GGG | + | chr4_3:59785821-59785840 | None:intergenic | 30.0% | |
| ATTGAAAATTCAAACTGCCT+TGG | + | chr4_3:59785822-59785841 | None:intergenic | 30.0% | |
| CAGAAATGCTAGAATATCTT+GGG | + | chr4_3:59786113-59786132 | None:intergenic | 30.0% | |
| TCAGAAATGCTAGAATATCT+TGG | + | chr4_3:59786114-59786133 | None:intergenic | 30.0% | |
| TTAAATTGTGTACACTGTAC+AGG | - | chr4_3:59786254-59786273 | Msa0652080:intron | 30.0% | |
| TGAAGTTCATTGAGATATCA+GGG | - | chr4_3:59786393-59786412 | Msa0652080:intron | 30.0% | |
| TAGAGCAGAGATACTTAAAA+TGG | - | chr4_3:59786426-59786445 | Msa0652080:intron | 30.0% | |
| ATATCAATGCATTCCAGTTA+GGG | - | chr4_3:59786532-59786551 | Msa0652080:intron | 30.0% | |
| !! | ACCGCACATGATTTTTATTT+TGG | + | chr4_3:59786607-59786626 | None:intergenic | 30.0% |
| AATAAAAATCATGTGCGGTT+CGG | - | chr4_3:59786608-59786627 | Msa0652080:intron | 30.0% | |
| TAAACCGCATATATTTGGAT+CGG | + | chr4_3:59786673-59786692 | None:intergenic | 30.0% | |
| !!! | ATATGCGGTTTATTTTGGAT+CGG | - | chr4_3:59786681-59786700 | Msa0652080:intron | 30.0% |
| !!! | GTTTATTTTGGATCGGTTTT+TGG | - | chr4_3:59786688-59786707 | Msa0652080:intron | 30.0% |
| !! | TAAAATCTACTTTTGCGGTT+CGG | - | chr4_3:59786955-59786974 | Msa0652080:intron | 30.0% |
| !! | TTTTGAAAAACCGCTATGAT+CGG | + | chr4_3:59787023-59787042 | None:intergenic | 30.0% |
| !!! | CGAATATTTTTGGATGTGTT+TGG | + | chr4_3:59787053-59787072 | None:intergenic | 30.0% |
| ! | CGCAAAAAACCGAATATTTT+TGG | + | chr4_3:59787063-59787082 | None:intergenic | 30.0% |
| !!! | TTTGCGGTTTTATTTTGGAT+TGG | - | chr4_3:59787105-59787124 | Msa0652080:CDS | 30.0% |
| TCTACAAAGAACCATCAATT+TGG | + | chr4_3:59787200-59787219 | None:intergenic | 30.0% | |
| ! | GAATTTTGCAGTTTCAGTGT+CGG | + | chr4_3:59776328-59776347 | None:intergenic | 35.0% |
| AAAACTGCAAGAGTAGTTTC+CGG | + | chr4_3:59776539-59776558 | None:intergenic | 35.0% | |
| TCTTTCGTTAAAAGCTTCGT+TGG | - | chr4_3:59776658-59776677 | Msa0652080:intron | 35.0% | |
| AATAAGCATAACTCTGCCAT+TGG | + | chr4_3:59776843-59776862 | None:intergenic | 35.0% | |
| GTAGTATGCTCTATGAATCA+CGG | + | chr4_3:59776876-59776895 | None:intergenic | 35.0% | |
| ACCTTCTACATAGAGTTCAA+AGG | - | chr4_3:59777060-59777079 | Msa0652080:intron | 35.0% | |
| CCTTCTACATAGAGTTCAAA+GGG | - | chr4_3:59777061-59777080 | Msa0652080:intron | 35.0% | |
| AATGTTGTGTTTACGAGGAT+CGG | - | chr4_3:59777119-59777138 | Msa0652080:three_prime_UTR | 35.0% | |
| ! | TAAGTTTTGCATGGCTGTTT+GGG | + | chr4_3:59777236-59777255 | None:intergenic | 35.0% |
| ! | ATAAGTTTTGCATGGCTGTT+TGG | + | chr4_3:59777237-59777256 | None:intergenic | 35.0% |
| ! | CTACTAGCATAAGTTTTGCA+TGG | + | chr4_3:59777245-59777264 | None:intergenic | 35.0% |
| GGTGAATTGTTATGCATTTG+CGG | - | chr4_3:59777352-59777371 | Msa0652080:CDS | 35.0% | |
| ! | TTGATAGCAAAATTGCACCA+TGG | - | chr4_3:59777559-59777578 | Msa0652080:intron | 35.0% |
| !!! | GGATCAATTTTTTGGCATCT+TGG | - | chr4_3:59777713-59777732 | Msa0652080:intron | 35.0% |
| ! | TTTTAGTGTGGTTGAATGTG+CGG | - | chr4_3:59778311-59778330 | Msa0652080:CDS | 35.0% |
| ! | CGGAGAAGTTTCAATTTGTT+TGG | - | chr4_3:59778331-59778350 | Msa0652080:CDS | 35.0% |
| CTTGCAGATTATTGATGTTC+TGG | - | chr4_3:59778398-59778417 | Msa0652080:intron | 35.0% | |
| !! | GTATTGTTTCTTTTGCATGC+AGG | - | chr4_3:59778585-59778604 | Msa0652080:intron | 35.0% |
| GTGACCTATTTGATCTTTCA+TGG | - | chr4_3:59778668-59778687 | Msa0652080:intron | 35.0% | |
| !! | TCCTTGCGTTGATGATAAAT+TGG | - | chr4_3:59778758-59778777 | Msa0652080:intron | 35.0% |
| !! | CCTTGCGTTGATGATAAATT+GGG | - | chr4_3:59778759-59778778 | Msa0652080:intron | 35.0% |
| ! | TTTGGTTCAGAAAACCAACA+TGG | + | chr4_3:59778840-59778859 | None:intergenic | 35.0% |
| CAATGACAATATAGATGCTG+TGG | - | chr4_3:59778919-59778938 | Msa0652080:intron | 35.0% | |
| !! | AAAGATGACATGATGGACTT+AGG | - | chr4_3:59778957-59778976 | Msa0652080:intron | 35.0% |
| !! | AAGATGACATGATGGACTTA+GGG | - | chr4_3:59778958-59778977 | Msa0652080:intron | 35.0% |
| ! | AGCTACTTTGCTTATGACAT+AGG | + | chr4_3:59779201-59779220 | None:intergenic | 35.0% |
| TTAATACGGTCTCTAACGTT+AGG | - | chr4_3:59779315-59779334 | Msa0652080:intron | 35.0% | |
| GTTAGGAGGCTTAATCAATT+AGG | - | chr4_3:59779332-59779351 | Msa0652080:intron | 35.0% | |
| GTTTGAATCCAAATCGTTGA+TGG | + | chr4_3:59779379-59779398 | None:intergenic | 35.0% | |
| TTTAGTCTGAATTCCAGACT+TGG | - | chr4_3:59779526-59779545 | Msa0652080:intron | 35.0% | |
| GATAATTGCATCCTTTAGCT+AGG | - | chr4_3:59780009-59780028 | Msa0652080:intron | 35.0% | |
| GAATTAAGAGTCTGACGAAA+TGG | + | chr4_3:59780399-59780418 | None:intergenic | 35.0% | |
| !! | GTTATGATAACAGTATCGAC+AGG | - | chr4_3:59780635-59780654 | Msa0652080:intron | 35.0% |
| AAAGGCCTAAATGGTTCAAA+GGG | + | chr4_3:59780759-59780778 | None:intergenic | 35.0% | |
| GAGAAATTTGATGAGAACTG+TGG | + | chr4_3:59780786-59780805 | None:intergenic | 35.0% | |
| CAAAGTGAATTTATTTGGGG+AGG | + | chr4_3:59780834-59780853 | None:intergenic | 35.0% | |
| TACCTTATCACCAATAGCAA+GGG | + | chr4_3:59780889-59780908 | None:intergenic | 35.0% | |
| ! | TTCATTCGGATGAAGTACTT+TGG | - | chr4_3:59780947-59780966 | Msa0652080:intron | 35.0% |
| TACTTTGGTCATCATAAGCT+AGG | - | chr4_3:59780962-59780981 | Msa0652080:intron | 35.0% | |
| AATAATCTCAACTGCTTTGG+TGG | - | chr4_3:59780998-59781017 | Msa0652080:intron | 35.0% | |
| ATAATCTCAACTGCTTTGGT+GGG | - | chr4_3:59780999-59781018 | Msa0652080:intron | 35.0% | |
| ! | TTCCTTGTACTTGTTCCTTT+TGG | - | chr4_3:59781118-59781137 | Msa0652080:intron | 35.0% |
| !!! | GATTTTTTTGAGGCAACAAG+AGG | + | chr4_3:59781152-59781171 | None:intergenic | 35.0% |
| AAATGAGAAAGAACAGGCAT+GGG | + | chr4_3:59781189-59781208 | None:intergenic | 35.0% | |
| AAAATGAGAAAGAACAGGCA+TGG | + | chr4_3:59781190-59781209 | None:intergenic | 35.0% | |
| ATCCCTTATTCAAGCTTCAT+TGG | - | chr4_3:59781217-59781236 | Msa0652080:intron | 35.0% | |
| TCCCTTATTCAAGCTTCATT+GGG | - | chr4_3:59781218-59781237 | Msa0652080:intron | 35.0% | |
| ATGCTTTGATTCAATTGGAC+TGG | - | chr4_3:59781339-59781358 | Msa0652080:intron | 35.0% | |
| TGCTTTGATTCAATTGGACT+GGG | - | chr4_3:59781340-59781359 | Msa0652080:intron | 35.0% | |
| CGGGTAAATCTCAAATCAAA+AGG | + | chr4_3:59781432-59781451 | None:intergenic | 35.0% | |
| AACAAAGTGCGCATGAAATT+AGG | + | chr4_3:59781509-59781528 | None:intergenic | 35.0% | |
| ATAGATTGTGCCTAAAGTTC+TGG | + | chr4_3:59781538-59781557 | None:intergenic | 35.0% | |
| ! | ACTTGCCTCAATGACTTTTA+TGG | + | chr4_3:59781648-59781667 | None:intergenic | 35.0% |
| TTGTGGATTTATATCGTGAC+AGG | - | chr4_3:59781667-59781686 | Msa0652080:intron | 35.0% | |
| !! | TGATTGGAACATTAGCCTTA+AGG | - | chr4_3:59781757-59781776 | Msa0652080:intron | 35.0% |
| CATGAACTCTGTTACTGAAA+AGG | - | chr4_3:59782008-59782027 | Msa0652080:CDS | 35.0% | |
| TGAACTCTGTTACTGAAAAG+GGG | - | chr4_3:59782010-59782029 | Msa0652080:CDS | 35.0% | |
| AGTCCCATTATAAATTGCCA+CGG | + | chr4_3:59782037-59782056 | None:intergenic | 35.0% | |
| !! | TAGAGTTGCTGCTTTAGTTA+TGG | - | chr4_3:59782089-59782108 | Msa0652080:CDS | 35.0% |
| GAGACAATCATTAGTGAAAG+GGG | + | chr4_3:59782140-59782159 | None:intergenic | 35.0% | |
| ! | GATTGTCTCTTCTTGATGAT+AGG | - | chr4_3:59782151-59782170 | Msa0652080:intron | 35.0% |
| CTGAAAAAAGTCTTTGTCTG+GGG | + | chr4_3:59782189-59782208 | None:intergenic | 35.0% | |
| !! | AATGATTTCTGGTTCTGCAT+TGG | - | chr4_3:59782303-59782322 | Msa0652080:intron | 35.0% |
| ACTCAGAAAGTAGTAGAAAC+GGG | + | chr4_3:59782407-59782426 | None:intergenic | 35.0% | |
| AACAAATTGCAACAAAGCTG+CGG | - | chr4_3:59782660-59782679 | Msa0652080:intron | 35.0% | |
| GAAAATGCTGAGGGAAATAT+TGG | - | chr4_3:59782913-59782932 | Msa0652080:intron | 35.0% | |
| TGCAATCATATCCACAAACT+GGG | + | chr4_3:59783154-59783173 | None:intergenic | 35.0% | |
| GACAGATCTGATAATATTCC+AGG | - | chr4_3:59783183-59783202 | Msa0652080:intron | 35.0% | |
| !!! | TTATTTTTTCCTCCTCCCTT+TGG | - | chr4_3:59783206-59783225 | Msa0652080:intron | 35.0% |
| TAAAATGATGTTCCAAAGGG+AGG | + | chr4_3:59783221-59783240 | None:intergenic | 35.0% | |
| ! | AGGAAGCTTTTCAAATACGA+GGG | - | chr4_3:59783279-59783298 | Msa0652080:intron | 35.0% |
| !! | ACGTCACCTTTGAAATCAAT+AGG | - | chr4_3:59783317-59783336 | Msa0652080:intron | 35.0% |
| TACGTGTAAATTTCAGGAAC+CGG | + | chr4_3:59783605-59783624 | None:intergenic | 35.0% | |
| TCCCATTACGTGTAAATTTC+AGG | + | chr4_3:59783611-59783630 | None:intergenic | 35.0% | |
| TGTAGAATAGAATGCATTGG+AGG | + | chr4_3:59783682-59783701 | None:intergenic | 35.0% | |
| CCTTGTAGAATAGAATGCAT+TGG | + | chr4_3:59783685-59783704 | None:intergenic | 35.0% | |
| CCAATGCATTCTATTCTACA+AGG | - | chr4_3:59783682-59783701 | Msa0652080:intron | 35.0% | |
| ! | ATTCCTGTTTTGTGGAATCA+AGG | - | chr4_3:59783724-59783743 | Msa0652080:intron | 35.0% |
| !!! | GGAATCACTGTTTTGTTTTC+AGG | - | chr4_3:59783806-59783825 | Msa0652080:intron | 35.0% |
| !!! | TGGGAGTATTTTGTACATAC+AGG | - | chr4_3:59783879-59783898 | Msa0652080:intron | 35.0% |
| CATACAGGAGTTAATGGAAT+TGG | - | chr4_3:59783894-59783913 | Msa0652080:intron | 35.0% | |
| CATCTAAGGAAACTTGGTAT+GGG | - | chr4_3:59784117-59784136 | Msa0652080:intron | 35.0% | |
| TTGGTTTCTGTGATAGTTAG+AGG | - | chr4_3:59784355-59784374 | Msa0652080:intron | 35.0% | |
| !!! | ACCTTACAAGCTGGTTTTTA+AGG | - | chr4_3:59784565-59784584 | Msa0652080:intron | 35.0% |
| TCCTTAAAAACCAGCTTGTA+AGG | + | chr4_3:59784569-59784588 | None:intergenic | 35.0% | |
| !! | CTGGTTTTTAAGGATGAGTT+AGG | - | chr4_3:59784575-59784594 | Msa0652080:intron | 35.0% |
| TCTGCTACCATGTTGAAATT+CGG | + | chr4_3:59784603-59784622 | None:intergenic | 35.0% | |
| !!! | TGGTTTTGTAAGGATGAGTT+AGG | - | chr4_3:59784837-59784856 | Msa0652080:intron | 35.0% |
| CTTCAAAAAGAATACCACAG+AGG | + | chr4_3:59784936-59784955 | None:intergenic | 35.0% | |
| ! | TCTCGTCCTTAGTATTGTTT+TGG | - | chr4_3:59785093-59785112 | Msa0652080:intron | 35.0% |
| CATTATATTGGATGGTTGCT+TGG | - | chr4_3:59785135-59785154 | Msa0652080:intron | 35.0% | |
| CTCTCTCCACTTATTTGAAT+AGG | - | chr4_3:59785266-59785285 | Msa0652080:intron | 35.0% | |
| ATCTGTTGACCAAATCAAAG+AGG | - | chr4_3:59785310-59785329 | Msa0652080:intron | 35.0% | |
| CAAAGAGGATCGTATTAGAA+AGG | - | chr4_3:59785325-59785344 | Msa0652080:intron | 35.0% | |
| CTTATGGCACAAAAACTTGA+TGG | + | chr4_3:59785926-59785945 | None:intergenic | 35.0% | |
| ! | TAGATGGTTTTTGCATACTG+TGG | - | chr4_3:59785968-59785987 | Msa0652080:intron | 35.0% |
| GTATCATTTGTGGGAAAAGT+TGG | - | chr4_3:59786362-59786381 | Msa0652080:intron | 35.0% | |
| GTGAAGTTCATTGAGATATC+AGG | - | chr4_3:59786392-59786411 | Msa0652080:intron | 35.0% | |
| AAAATGGAGCATGTCAATAC+TGG | - | chr4_3:59786442-59786461 | Msa0652080:intron | 35.0% | |
| !!! | GTCGAGCATGTGTTTTTTTT+GGG | - | chr4_3:59786506-59786525 | Msa0652080:intron | 35.0% |
| GATATCAATGCATTCCAGTT+AGG | - | chr4_3:59786531-59786550 | Msa0652080:intron | 35.0% | |
| TATCAATGCATTCCAGTTAG+GGG | - | chr4_3:59786533-59786552 | Msa0652080:intron | 35.0% | |
| !!! | ATTCGGTTTTTTGCGGTTTT+CGG | - | chr4_3:59787068-59787087 | Msa0652080:CDS | 35.0% |
| ! | TTTGCGGTTTTCGGTTTTTT+TGG | - | chr4_3:59787077-59787096 | Msa0652080:CDS | 35.0% |
| !!! | GGTTTTCGGTTTTTTTGGAT+CGG | - | chr4_3:59787082-59787101 | Msa0652080:CDS | 35.0% |
| !!! | ATCGGTTTGCGGTTTTATTT+TGG | - | chr4_3:59787100-59787119 | Msa0652080:CDS | 35.0% |
| GGTTATGTATGCCAAATTGA+TGG | - | chr4_3:59787186-59787205 | Msa0652080:CDS | 35.0% | |
| ! | TTTAGAACGCATGATGCAAA+TGG | - | chr4_3:59787238-59787257 | Msa0652080:five_prime_UTR | 35.0% |
| GAAGTTAAACGCTATGGCAT+GGG | + | chr4_3:59776384-59776403 | None:intergenic | 40.0% | |
| TGAAGTTAAACGCTATGGCA+TGG | + | chr4_3:59776385-59776404 | None:intergenic | 40.0% | |
| ! | GGCATTGAAGTTAAACGCTA+TGG | + | chr4_3:59776390-59776409 | None:intergenic | 40.0% |
| GAAATGGGAGTGAAGAAAGA+AGG | + | chr4_3:59776461-59776480 | None:intergenic | 40.0% | |
| !! | GTTAAAAGCTTCGTTGGCTT+TGG | - | chr4_3:59776664-59776683 | Msa0652080:intron | 40.0% |
| !! | TTCGTTGGCTTTGGTTTGTT+AGG | - | chr4_3:59776673-59776692 | Msa0652080:intron | 40.0% |
| !! | TCGTTGGCTTTGGTTTGTTA+GGG | - | chr4_3:59776674-59776693 | Msa0652080:intron | 40.0% |
| ! | GGGTTTTTGCAGTGTATCTT+TGG | - | chr4_3:59776694-59776713 | Msa0652080:intron | 40.0% |
| GTGCCTCCAGAAATTAGTTA+CGG | - | chr4_3:59776767-59776786 | Msa0652080:intron | 40.0% | |
| GGCAGAGTTATGCTTATTGA+TGG | - | chr4_3:59776845-59776864 | Msa0652080:intron | 40.0% | |
| AGAGCATACTACAAGCTGTT+AGG | - | chr4_3:59776884-59776903 | Msa0652080:intron | 40.0% | |
| CCCTTTGAACTCTATGTAGA+AGG | + | chr4_3:59777064-59777083 | None:intergenic | 40.0% | |
| ATAACAATGTCACGTCTCCT+AGG | - | chr4_3:59777090-59777109 | Msa0652080:intron | 40.0% | |
| AACACAACATTCATGGACCT+AGG | + | chr4_3:59777110-59777129 | None:intergenic | 40.0% | |
| CCTCGTAAACACAACATTCA+TGG | + | chr4_3:59777117-59777136 | None:intergenic | 40.0% | |
| CCATGAATGTTGTGTTTACG+AGG | - | chr4_3:59777114-59777133 | Msa0652080:three_prime_UTR | 40.0% | |
| ! | TAGCACACATAGAGCTTGTT+GGG | + | chr4_3:59777292-59777311 | None:intergenic | 40.0% |
| ATAGCACACATAGAGCTTGT+TGG | + | chr4_3:59777293-59777312 | None:intergenic | 40.0% | |
| TGATCGTTGTTGATCCACAT+TGG | - | chr4_3:59777535-59777554 | Msa0652080:intron | 40.0% | |
| AACCCAATCTCCATTTCCAT+CGG | + | chr4_3:59777599-59777618 | None:intergenic | 40.0% | |
| AGAAAAGTCTTGATGAGGGT+GGG | + | chr4_3:59777811-59777830 | None:intergenic | 40.0% | |
| CCATTACGCACTTAGACAAA+TGG | + | chr4_3:59778026-59778045 | None:intergenic | 40.0% | |
| CCATTTGTCTAAGTGCGTAA+TGG | - | chr4_3:59778023-59778042 | Msa0652080:CDS | 40.0% | |
| GACAAAACATACCACCACAT+GGG | + | chr4_3:59778436-59778455 | None:intergenic | 40.0% | |
| GTAAACACTGAACACGACAA+GGG | + | chr4_3:59778543-59778562 | None:intergenic | 40.0% | |
| TGTAAACACTGAACACGACA+AGG | + | chr4_3:59778544-59778563 | None:intergenic | 40.0% | |
| CCCAATTTATCATCAACGCA+AGG | + | chr4_3:59778762-59778781 | None:intergenic | 40.0% | |
| ATAGATGCTGTGGGAAAAAG+TGG | - | chr4_3:59778929-59778948 | Msa0652080:intron | 40.0% | |
| TAGATGCTGTGGGAAAAAGT+GGG | - | chr4_3:59778930-59778949 | Msa0652080:intron | 40.0% | |
| GGGCTATAAAGATGACATGA+TGG | - | chr4_3:59778950-59778969 | Msa0652080:intron | 40.0% | |
| !! | AGATGACATGATGGACTTAG+GGG | - | chr4_3:59778959-59778978 | Msa0652080:intron | 40.0% |
| CAACAACAAAAAATACGGCG+AGG | - | chr4_3:59779436-59779455 | Msa0652080:intron | 40.0% | |
| GAAAAGATAGTTCACTTCGG+CGG | + | chr4_3:59779749-59779768 | None:intergenic | 40.0% | |
| ! | CAACTGTCTAAAACTTCAGC+AGG | + | chr4_3:59779776-59779795 | None:intergenic | 40.0% |
| TCTGTCCCTTTGAACCATTT+AGG | - | chr4_3:59780751-59780770 | Msa0652080:intron | 40.0% | |
| GAAAGGCCTAAATGGTTCAA+AGG | + | chr4_3:59780760-59780779 | None:intergenic | 40.0% | |
| CTACCTTATCACCAATAGCA+AGG | + | chr4_3:59780890-59780909 | None:intergenic | 40.0% | |
| ! | GCTATTGGTGATAAGGTAGT+AGG | - | chr4_3:59780891-59780910 | Msa0652080:intron | 40.0% |
| TTTGGTCATCATAAGCTAGG+CGG | - | chr4_3:59780965-59780984 | Msa0652080:intron | 40.0% | |
| TAATCTCAACTGCTTTGGTG+GGG | - | chr4_3:59781000-59781019 | Msa0652080:intron | 40.0% | |
| !! | CGAAAGGTTCTAGACTTTGA+AGG | - | chr4_3:59781034-59781053 | Msa0652080:intron | 40.0% |
| !! | TCAGTGACATTTCTAGCTGA+AGG | - | chr4_3:59781069-59781088 | Msa0652080:intron | 40.0% |
| GTCCAAAAGGAACAAGTACA+AGG | + | chr4_3:59781123-59781142 | None:intergenic | 40.0% | |
| CCCCAATGAAGCTTGAATAA+GGG | + | chr4_3:59781222-59781241 | None:intergenic | 40.0% | |
| CCCTTATTCAAGCTTCATTG+GGG | - | chr4_3:59781219-59781238 | Msa0652080:intron | 40.0% | |
| TCCCCAATGAAGCTTGAATA+AGG | + | chr4_3:59781223-59781242 | None:intergenic | 40.0% | |
| GCTTTGATTCAATTGGACTG+GGG | - | chr4_3:59781341-59781360 | Msa0652080:intron | 40.0% | |
| ! | TTCATGCGCACTTTGTTTGA+AGG | - | chr4_3:59781512-59781531 | Msa0652080:intron | 40.0% |
| TGTTTGAAGGCCAGAACTTT+AGG | - | chr4_3:59781525-59781544 | Msa0652080:intron | 40.0% | |
| TGAACAATGGTATCAGGAGT+AGG | + | chr4_3:59781587-59781606 | None:intergenic | 40.0% | |
| TACTCCTGATACCATTGTTC+AGG | - | chr4_3:59781586-59781605 | Msa0652080:intron | 40.0% | |
| ACTCCTGATACCATTGTTCA+GGG | - | chr4_3:59781587-59781606 | Msa0652080:intron | 40.0% | |
| GTATTGAAGTCCCTGAACAA+TGG | + | chr4_3:59781600-59781619 | None:intergenic | 40.0% | |
| ! | ATACCTCAAAGCATCCATCA+AGG | - | chr4_3:59781616-59781635 | Msa0652080:intron | 40.0% |
| ! | CTCAATGACTTTTATGGCCA+TGG | + | chr4_3:59781642-59781661 | None:intergenic | 40.0% |
| CATGGCCATAAAAGTCATTG+AGG | - | chr4_3:59781640-59781659 | Msa0652080:intron | 40.0% | |
| AAAGTCATTGAGGCAAGTTG+TGG | - | chr4_3:59781650-59781669 | Msa0652080:intron | 40.0% | |
| GTAGAAGCAGATGATGTGAT+TGG | - | chr4_3:59781741-59781760 | Msa0652080:intron | 40.0% | |
| ! | AAAGGTACATCGGAGTTAGA+GGG | + | chr4_3:59781843-59781862 | None:intergenic | 40.0% |
| ! | TAAAGGTACATCGGAGTTAG+AGG | + | chr4_3:59781844-59781863 | None:intergenic | 40.0% |
| GAACTCTGTTACTGAAAAGG+GGG | - | chr4_3:59782011-59782030 | Msa0652080:CDS | 40.0% | |
| AATCATTAGTGAAAGGGGCT+TGG | + | chr4_3:59782135-59782154 | None:intergenic | 40.0% | |
| CTCAGAAAGTAGTAGAAACG+GGG | + | chr4_3:59782406-59782425 | None:intergenic | 40.0% | |
| ACAACCATATACTGGAGTAC+TGG | - | chr4_3:59782593-59782612 | Msa0652080:intron | 40.0% | |
| TTGTCCAGTACTCCAGTATA+TGG | + | chr4_3:59782600-59782619 | None:intergenic | 40.0% | |
| GAGAATATAGAAGGCAAGCT+AGG | - | chr4_3:59782808-59782827 | Msa0652080:intron | 40.0% | |
| CAAACGAAACCATCCTATTG+AGG | + | chr4_3:59783089-59783108 | None:intergenic | 40.0% | |
| CTCAATAGGATGGTTTCGTT+TGG | - | chr4_3:59783087-59783106 | Msa0652080:intron | 40.0% | |
| ATCATATCCACAAACTGGGA+TGG | + | chr4_3:59783150-59783169 | None:intergenic | 40.0% | |
| GTGCAATCATATCCACAAAC+TGG | + | chr4_3:59783155-59783174 | None:intergenic | 40.0% | |
| GTGGATATGATTGCACTTTC+TGG | - | chr4_3:59783159-59783178 | Msa0652080:intron | 40.0% | |
| TTTGAAAAGCTTCCTGGACT+TGG | + | chr4_3:59783274-59783293 | None:intergenic | 40.0% | |
| CTCGTATTTGAAAAGCTTCC+TGG | + | chr4_3:59783280-59783299 | None:intergenic | 40.0% | |
| ! | CAGGAAGCTTTTCAAATACG+AGG | - | chr4_3:59783278-59783297 | Msa0652080:intron | 40.0% |
| ATTGGATCATGCACAAGTAG+AGG | + | chr4_3:59783411-59783430 | None:intergenic | 40.0% | |
| TACAAGGAATTCCTTCCTCT+AGG | - | chr4_3:59783698-59783717 | Msa0652080:intron | 40.0% | |
| ACAAGGAATTCCTTCCTCTA+GGG | - | chr4_3:59783699-59783718 | Msa0652080:intron | 40.0% | |
| TAGTTTGGCACGAAGAAAGA+TGG | + | chr4_3:59783751-59783770 | None:intergenic | 40.0% | |
| TTGCTCAAAGTGAGCATCTA+AGG | - | chr4_3:59784103-59784122 | Msa0652080:intron | 40.0% | |
| AGTGAGCATCTAAGGAAACT+TGG | - | chr4_3:59784111-59784130 | Msa0652080:intron | 40.0% | |
| GCATCTAAGGAAACTTGGTA+TGG | - | chr4_3:59784116-59784135 | Msa0652080:intron | 40.0% | |
| AGAGAGGTTAGGCTACAATT+TGG | - | chr4_3:59784264-59784283 | Msa0652080:intron | 40.0% | |
| GGTTAGGCTACAATTTGGTA+AGG | - | chr4_3:59784269-59784288 | Msa0652080:intron | 40.0% | |
| AGAGTATACACAGATAGGCT+AGG | + | chr4_3:59784322-59784341 | None:intergenic | 40.0% | |
| ! | GAGTCTTATCTAACCGATGT+GGG | + | chr4_3:59784511-59784530 | None:intergenic | 40.0% |
| ! | AGAGTCTTATCTAACCGATG+TGG | + | chr4_3:59784512-59784531 | None:intergenic | 40.0% |
| AAAACCAGCTTGTAAGGTGA+GGG | + | chr4_3:59784563-59784582 | None:intergenic | 40.0% | |
| AAAAACCAGCTTGTAAGGTG+AGG | + | chr4_3:59784564-59784583 | None:intergenic | 40.0% | |
| TTAGGCTCCGAATTTCAACA+TGG | - | chr4_3:59784593-59784612 | Msa0652080:intron | 40.0% | |
| CCTATCCAAGATCTATCGTT+GGG | - | chr4_3:59784624-59784643 | Msa0652080:intron | 40.0% | |
| ! | GAGTCTTATCTAACCGATGT+GGG | + | chr4_3:59784511-59784530 | None:intergenic | 40.0% |
| ! | AGAGTCTTATCTAACCGATG+TGG | + | chr4_3:59784512-59784531 | None:intergenic | 40.0% |
| CCTTACAAAACCAGCTTGTA+AGG | + | chr4_3:59784830-59784849 | None:intergenic | 40.0% | |
| !!! | CCTTACAAGCTGGTTTTGTA+AGG | - | chr4_3:59784827-59784846 | Msa0652080:intron | 40.0% |
| TTCTTATCGTCATTCCTCTG+TGG | - | chr4_3:59784919-59784938 | Msa0652080:intron | 40.0% | |
| ! | TTTTCTGGACAGTCCAGTAT+AGG | + | chr4_3:59784982-59785001 | None:intergenic | 40.0% |
| AATAACTTTACCCCTGAAGC+GGG | + | chr4_3:59785355-59785374 | None:intergenic | 40.0% | |
| GAATAACTTTACCCCTGAAG+CGG | + | chr4_3:59785356-59785375 | None:intergenic | 40.0% | |
| GTATAGTTTCGAACAAGGGA+AGG | + | chr4_3:59785460-59785479 | None:intergenic | 40.0% | |
| !! | GGCATTGACGTCATAATAGT+GGG | + | chr4_3:59785506-59785525 | None:intergenic | 40.0% |
| ! | CTGCTCAGCATTTTCAGTTA+AGG | + | chr4_3:59785564-59785583 | None:intergenic | 40.0% |
| CTTAACTGAAAATGCTGAGC+AGG | - | chr4_3:59785562-59785581 | Msa0652080:intron | 40.0% | |
| TGAGCAGGCTATATTAAGCA+AGG | - | chr4_3:59785577-59785596 | Msa0652080:intron | 40.0% | |
| GGCTATATTAAGCAAGGAAC+TGG | - | chr4_3:59785583-59785602 | Msa0652080:intron | 40.0% | |
| TGAATGGTACCATGTAGGAT+GGG | + | chr4_3:59785756-59785775 | None:intergenic | 40.0% | |
| TACAGTGAATGGTACCATGT+AGG | + | chr4_3:59785761-59785780 | None:intergenic | 40.0% | |
| ! | TCTCTTGTTTACTAAACCCG+AGG | - | chr4_3:59785786-59785805 | Msa0652080:intron | 40.0% |
| TTTACTAAACCCGAGGTTTG+TGG | - | chr4_3:59785793-59785812 | Msa0652080:intron | 40.0% | |
| ! | ATGGTTTTTGCATACTGTGG+CGG | - | chr4_3:59785971-59785990 | Msa0652080:intron | 40.0% |
| TGCAGTTGCATACATGTTTG+CGG | - | chr4_3:59786014-59786033 | Msa0652080:CDS | 40.0% | |
| AGCGTACTGCCAAACATTTA+CGG | + | chr4_3:59786194-59786213 | None:intergenic | 40.0% | |
| TTTCAGCTGATCCTATCATC+AGG | - | chr4_3:59786334-59786353 | Msa0652080:intron | 40.0% | |
| TGATACACTCTCCTGATGAT+AGG | + | chr4_3:59786348-59786367 | None:intergenic | 40.0% | |
| ! | TCAGGAGAGTGTATCATTTG+TGG | - | chr4_3:59786352-59786371 | Msa0652080:intron | 40.0% |
| ! | CAGGAGAGTGTATCATTTGT+GGG | - | chr4_3:59786353-59786372 | Msa0652080:intron | 40.0% |
| TGTGGGAAAAGTTGGATTCA+AGG | - | chr4_3:59786370-59786389 | Msa0652080:intron | 40.0% | |
| TGGAACCACAATACAACATG+AGG | - | chr4_3:59786462-59786481 | Msa0652080:intron | 40.0% | |
| GGAACCACAATACAACATGA+GGG | - | chr4_3:59786463-59786482 | Msa0652080:intron | 40.0% | |
| GAACCACAATACAACATGAG+GGG | - | chr4_3:59786464-59786483 | Msa0652080:intron | 40.0% | |
| AATCCCCTCATGTTGTATTG+TGG | + | chr4_3:59786470-59786489 | None:intergenic | 40.0% | |
| !!! | CGTCGAGCATGTGTTTTTTT+TGG | - | chr4_3:59786505-59786524 | Msa0652080:intron | 40.0% |
| ATATTTGGATCGGATCGGAT+CGG | + | chr4_3:59786663-59786682 | None:intergenic | 40.0% | |
| CGCATATATTTGGATCGGAT+CGG | + | chr4_3:59786668-59786687 | None:intergenic | 40.0% | |
| CGATCCGATCCAAATATATG+CGG | - | chr4_3:59786666-59786685 | Msa0652080:intron | 40.0% | |
| !!! | GGTTTGGTTCGGTTTTGAAA+AGG | - | chr4_3:59786981-59787000 | Msa0652080:intron | 40.0% |
| GCTATGATCGGTTAGGATTT+CGG | + | chr4_3:59787011-59787030 | None:intergenic | 40.0% | |
| GAAATCCTAACCGATCATAG+CGG | - | chr4_3:59787010-59787029 | Msa0652080:intron | 40.0% | |
| AAAAACCGCTATGATCGGTT+AGG | + | chr4_3:59787018-59787037 | None:intergenic | 40.0% | |
| !!! | GGTTTTTTTGGATCGGTTTG+CGG | - | chr4_3:59787089-59787108 | Msa0652080:CDS | 40.0% |
| AGAACACTCACTGGAATTAG+GGG | + | chr4_3:59787145-59787164 | None:intergenic | 40.0% | |
| CAGAACACTCACTGGAATTA+GGG | + | chr4_3:59787146-59787165 | None:intergenic | 40.0% | |
| ! | TGAAGTGACAATAGCTCTAC+TGG | - | chr4_3:59787281-59787300 | Msa0652080:five_prime_UTR | 40.0% |
| ! | GAAGTGACAATAGCTCTACT+GGG | - | chr4_3:59787282-59787301 | Msa0652080:five_prime_UTR | 40.0% |
| AAGAGAACGCGCGTTTGAAA+TGG | + | chr4_3:59776359-59776378 | None:intergenic | 45.0% | |
| CGTGAAGAACGAAGAAGGTT+TGG | + | chr4_3:59776568-59776587 | None:intergenic | 45.0% | |
| ATTACGCGAGTGTGTTACCT+TGG | + | chr4_3:59776602-59776621 | None:intergenic | 45.0% | |
| ! | GCTCCGTAACTAATTTCTGG+AGG | + | chr4_3:59776773-59776792 | None:intergenic | 45.0% |
| GCAGCTCCGTAACTAATTTC+TGG | + | chr4_3:59776776-59776795 | None:intergenic | 45.0% | |
| GTAACAGAACCAATGTGCAC+GGG | + | chr4_3:59776803-59776822 | None:intergenic | 45.0% | |
| GGTAACAGAACCAATGTGCA+CGG | + | chr4_3:59776804-59776823 | None:intergenic | 45.0% | |
| !! | CACATAGAGCTTGTTGGGAT+TGG | + | chr4_3:59777287-59777306 | None:intergenic | 45.0% |
| ATGCCGATGGAAATGGAGAT+TGG | - | chr4_3:59777593-59777612 | Msa0652080:intron | 45.0% | |
| TGCCGATGGAAATGGAGATT+GGG | - | chr4_3:59777594-59777613 | Msa0652080:intron | 45.0% | |
| CAGAAAAGTCTTGATGAGGG+TGG | + | chr4_3:59777812-59777831 | None:intergenic | 45.0% | |
| ! | CTAAGACTGTGTGTTGCTAC+TGG | + | chr4_3:59778083-59778102 | None:intergenic | 45.0% |
| GGAATTCATTCCTTCCCATG+TGG | - | chr4_3:59778419-59778438 | Msa0652080:intron | 45.0% | |
| ATTCATTCCTTCCCATGTGG+TGG | - | chr4_3:59778422-59778441 | Msa0652080:intron | 45.0% | |
| AAACATACCACCACATGGGA+AGG | + | chr4_3:59778432-59778451 | None:intergenic | 45.0% | |
| GGACAAAACATACCACCACA+TGG | + | chr4_3:59778437-59778456 | None:intergenic | 45.0% | |
| CAGGTAGTGTTTGACCATGA+TGG | - | chr4_3:59778604-59778623 | Msa0652080:intron | 45.0% | |
| !! | GATGACATGATGGACTTAGG+GGG | - | chr4_3:59778960-59778979 | Msa0652080:intron | 45.0% |
| !! | CATCCTCTAAGGAGGCATTT+GGG | + | chr4_3:59779226-59779245 | None:intergenic | 45.0% |
| !! | TCATCCTCTAAGGAGGCATT+TGG | + | chr4_3:59779227-59779246 | None:intergenic | 45.0% |
| !! | CTTTAGGGCTTCATCCTCTA+AGG | + | chr4_3:59779237-59779256 | None:intergenic | 45.0% |
| AGAGGATGAAGCCCTAAAGT+TGG | - | chr4_3:59779238-59779257 | Msa0652080:intron | 45.0% | |
| ATACGGTCTCTAACGTTAGG+AGG | - | chr4_3:59779318-59779337 | Msa0652080:intron | 45.0% | |
| CTGATCAGCCATCAACGATT+TGG | - | chr4_3:59779368-59779387 | Msa0652080:intron | 45.0% | |
| CAGAGGATCAGGACACTTAA+AGG | + | chr4_3:59779582-59779601 | None:intergenic | 45.0% | |
| CAGTGTAAAGCCAGTATTGC+TGG | + | chr4_3:59779605-59779624 | None:intergenic | 45.0% | |
| ! | GATGGGAATCTTTTCACCCT+TGG | - | chr4_3:59780046-59780065 | Msa0652080:intron | 45.0% |
| TCTACAAGCTGTTGATGCAC+CGG | - | chr4_3:59780226-59780245 | Msa0652080:intron | 45.0% | |
| TTAGTGTGCCAAGATACCAC+CGG | + | chr4_3:59780248-59780267 | None:intergenic | 45.0% | |
| AACTCTGTTATTCCAGAGCC+TGG | - | chr4_3:59780692-59780711 | Msa0652080:intron | 45.0% | |
| TTACATCTCTCTAAGCAGCC+AGG | + | chr4_3:59780713-59780732 | None:intergenic | 45.0% | |
| TGTGGAGAGAAAGGCCTAAA+TGG | + | chr4_3:59780768-59780787 | None:intergenic | 45.0% | |
| GATGAGAACTGTGGAGAGAA+AGG | + | chr4_3:59780777-59780796 | None:intergenic | 45.0% | |
| TTATCACCAATAGCAAGGGC+AGG | + | chr4_3:59780885-59780904 | None:intergenic | 45.0% | |
| !! | TGCCCTTGCTATTGGTGATA+AGG | - | chr4_3:59780884-59780903 | Msa0652080:intron | 45.0% |
| TGGGGCATAACAAGAACGAA+AGG | - | chr4_3:59781018-59781037 | Msa0652080:intron | 45.0% | |
| !! | ACATTTCTAGCTGAAGGTGC+TGG | - | chr4_3:59781075-59781094 | Msa0652080:intron | 45.0% |
| TGCTGGAGTTTCTACTCCTT+GGG | - | chr4_3:59781092-59781111 | Msa0652080:intron | 45.0% | |
| CAAGTACAAGGAATCACCCA+AGG | + | chr4_3:59781111-59781130 | None:intergenic | 45.0% | |
| CAAGAGGGCTAAAGTCCAAA+AGG | + | chr4_3:59781136-59781155 | None:intergenic | 45.0% | |
| ACAATGGTATCAGGAGTAGG+AGG | + | chr4_3:59781584-59781603 | None:intergenic | 45.0% | |
| AGTCCCTGAACAATGGTATC+AGG | + | chr4_3:59781593-59781612 | None:intergenic | 45.0% | |
| !! | TTTTATGGCCATGGCCTTGA+TGG | + | chr4_3:59781633-59781652 | None:intergenic | 45.0% |
| ACATCATCTGCTTCTACACC+TGG | + | chr4_3:59781738-59781757 | None:intergenic | 45.0% | |
| !! | CCTTAAGGAGTGTTGATGCT+GGG | - | chr4_3:59781772-59781791 | Msa0652080:intron | 45.0% |
| GGGCCGTGGCAATTTATAAT+GGG | - | chr4_3:59782031-59782050 | Msa0652080:CDS | 45.0% | |
| ! | GGGCTTGGTAATATCACTGA+AGG | + | chr4_3:59782120-59782139 | None:intergenic | 45.0% |
| AGTCTTAGGAGACGTAACGA+CGG | + | chr4_3:59782221-59782240 | None:intergenic | 45.0% | |
| GATACTAACTGATCACCACG+TGG | + | chr4_3:59782248-59782267 | None:intergenic | 45.0% | |
| !! | GATTTCTGGTTCTGCATTGG+CGG | - | chr4_3:59782306-59782325 | Msa0652080:intron | 45.0% |
| ! | ACCAAGCCTTATCCCACTAA+GGG | + | chr4_3:59782521-59782540 | None:intergenic | 45.0% |
| ! | AACCAAGCCTTATCCCACTA+AGG | + | chr4_3:59782522-59782541 | None:intergenic | 45.0% |
| ! | TCTGAAACCATCCCAGTTTG+TGG | - | chr4_3:59783140-59783159 | Msa0652080:intron | 45.0% |
| GGGAGGAGGAAAAAATAACC+TGG | + | chr4_3:59783204-59783223 | None:intergenic | 45.0% | |
| AATGATGTTCCAAAGGGAGG+AGG | + | chr4_3:59783218-59783237 | None:intergenic | 45.0% | |
| TGAACAAGGTTACCAAGTCC+AGG | - | chr4_3:59783259-59783278 | Msa0652080:intron | 45.0% | |
| CAAAACAGGAATGACCCTAG+AGG | + | chr4_3:59783716-59783735 | None:intergenic | 45.0% | |
| ! | CTAGGGTCATTCCTGTTTTG+TGG | - | chr4_3:59783716-59783735 | Msa0652080:intron | 45.0% |
| GGACCTTGATTCCACAAAAC+AGG | + | chr4_3:59783730-59783749 | None:intergenic | 45.0% | |
| CTGAATGTTGATGTGGCAAG+AGG | - | chr4_3:59784241-59784260 | Msa0652080:intron | 45.0% | |
| CAATTTGGTAAGGTTTGCGC+CGG | - | chr4_3:59784279-59784298 | Msa0652080:intron | 45.0% | |
| AAGCCAACACAAGGCAACTA+GGG | + | chr4_3:59784470-59784489 | None:intergenic | 45.0% | |
| AAAGCCAACACAAGGCAACT+AGG | + | chr4_3:59784471-59784490 | None:intergenic | 45.0% | |
| !! | TTGCCTTGTGTTGGCTTTGA+GGG | - | chr4_3:59784473-59784492 | Msa0652080:intron | 45.0% |
| AAACCAGCTTGTAAGGTGAG+GGG | + | chr4_3:59784562-59784581 | None:intergenic | 45.0% | |
| GCCTATCCAAGATCTATCGT+TGG | - | chr4_3:59784623-59784642 | Msa0652080:intron | 45.0% | |
| CCCAACGATAGATCTTGGAT+AGG | + | chr4_3:59784627-59784646 | None:intergenic | 45.0% | |
| GGAATCCCAACGATAGATCT+TGG | + | chr4_3:59784632-59784651 | None:intergenic | 45.0% | |
| AAGCCAACTCAAGGCAACTA+GGG | + | chr4_3:59784731-59784750 | None:intergenic | 45.0% | |
| AAAGCCAACTCAAGGCAACT+AGG | + | chr4_3:59784732-59784751 | None:intergenic | 45.0% | |
| !! | TTGCCTTGAGTTGGCTTTGA+GGG | - | chr4_3:59784734-59784753 | Msa0652080:intron | 45.0% |
| CAAAACCAGCTTGTAAGGTG+AGG | + | chr4_3:59784825-59784844 | None:intergenic | 45.0% | |
| AGGCACATTGGAGAAGTTGT+TGG | - | chr4_3:59785286-59785305 | Msa0652080:intron | 45.0% | |
| !! | TAGAAAGGTATTCCCGCTTC+AGG | - | chr4_3:59785340-59785359 | Msa0652080:intron | 45.0% |
| !! | AGAAAGGTATTCCCGCTTCA+GGG | - | chr4_3:59785341-59785360 | Msa0652080:intron | 45.0% |
| !! | CGGCATTGACGTCATAATAG+TGG | + | chr4_3:59785507-59785526 | None:intergenic | 45.0% |
| TTGTGATCTCCCATCCTACA+TGG | - | chr4_3:59785744-59785763 | Msa0652080:intron | 45.0% | |
| GTGAATGGTACCATGTAGGA+TGG | + | chr4_3:59785757-59785776 | None:intergenic | 45.0% | |
| ! | AGAGAGCGTGGTTATGCTTA+TGG | + | chr4_3:59785942-59785961 | None:intergenic | 45.0% |
| CATCTAGTTATGAGAGAGCG+TGG | + | chr4_3:59785954-59785973 | None:intergenic | 45.0% | |
| CACGCTCTCTCATAACTAGA+TGG | - | chr4_3:59785952-59785971 | Msa0652080:intron | 45.0% | |
| GCAGTTGCATACATGTTTGC+GGG | - | chr4_3:59786015-59786034 | Msa0652080:CDS | 45.0% | |
| GTGTACACTGTACAGGACAA+TGG | - | chr4_3:59786261-59786280 | Msa0652080:intron | 45.0% | |
| !! | AAATCATGTGCGGTTCGGTT+CGG | - | chr4_3:59786613-59786632 | Msa0652080:intron | 45.0% |
| !!! | TCTACTTTTGCGGTTCGGTT+CGG | - | chr4_3:59786960-59786979 | Msa0652080:intron | 45.0% |
| GCAGAACACTCACTGGAATT+AGG | + | chr4_3:59787147-59787166 | None:intergenic | 45.0% | |
| TTTCATCGCAGAACACTCAC+TGG | + | chr4_3:59787154-59787173 | None:intergenic | 45.0% | |
| CGCATGATGCAAATGGTAGT+AGG | - | chr4_3:59787245-59787264 | Msa0652080:five_prime_UTR | 45.0% | |
| !! | AAGGGCATTGGGTAGAAGTT+AGG | + | chr4_3:59787323-59787342 | None:intergenic | 45.0% |
| !!! | TATTTTGATTATTTTATTTT+TGG | - | chr4_3:59778730-59778749 | Msa0652080:intron | 5.0% |
| !!! | ATTTTGATTATTTTATTTTT+GGG | - | chr4_3:59778731-59778750 | Msa0652080:intron | 5.0% |
| !! | TTCATATTATTATAATATTA+TGG | - | chr4_3:59781973-59781992 | Msa0652080:intron | 5.0% |
| !!! | TATATTTTTTAATTAGTTTT+TGG | - | chr4_3:59785843-59785862 | Msa0652080:intron | 5.0% |
| !!! | ATTCTTATTTATTATTTTAT+TGG | + | chr4_3:59786935-59786954 | None:intergenic | 5.0% |
| ! | TGCAGTTTCAGTGTCGGAAC+CGG | + | chr4_3:59776322-59776341 | None:intergenic | 50.0% |
| GGGAGTGAAGAAAGAAGGAG+TGG | + | chr4_3:59776456-59776475 | None:intergenic | 50.0% | |
| TGAATGCGACGGAGAGGAAA+TGG | + | chr4_3:59776499-59776518 | None:intergenic | 50.0% | |
| ACTGCAAGAGTAGTTTCCGG+CGG | + | chr4_3:59776536-59776555 | None:intergenic | 50.0% | |
| GAGTGTGTTACCTTGGAGAG+TGG | + | chr4_3:59776595-59776614 | None:intergenic | 50.0% | |
| TCTGCAACTTCTCCAACCAC+CGG | - | chr4_3:59776740-59776759 | Msa0652080:intron | 50.0% | |
| AACTTCTCCAACCACCGGAA+CGG | - | chr4_3:59776745-59776764 | Msa0652080:intron | 50.0% | |
| !! | AATTTCTGGAGGCACCGTTC+CGG | + | chr4_3:59776762-59776781 | None:intergenic | 50.0% |
| TGTTACCAATGCCGAAGCTG+CGG | - | chr4_3:59776817-59776836 | Msa0652080:intron | 50.0% | |
| CTAGCACATGCCGATGGAAA+TGG | - | chr4_3:59777586-59777605 | Msa0652080:intron | 50.0% | |
| TCTCCCAAATGCCTCCTTAG+AGG | - | chr4_3:59779220-59779239 | Msa0652080:intron | 50.0% | |
| ! | TAGGGCTTCATCCTCTAAGG+AGG | + | chr4_3:59779234-59779253 | None:intergenic | 50.0% |
| AGTATTGCTGGCAGAGGATC+AGG | + | chr4_3:59779593-59779612 | None:intergenic | 50.0% | |
| TGATCCTCTGCCAGCAATAC+TGG | - | chr4_3:59779592-59779611 | Msa0652080:intron | 50.0% | |
| AAAGCCAGTATTGCTGGCAG+AGG | + | chr4_3:59779599-59779618 | None:intergenic | 50.0% | |
| TATCGGTGCAAGAGCTTGGT+GGG | + | chr4_3:59780115-59780134 | None:intergenic | 50.0% | |
| TTATCGGTGCAAGAGCTTGG+TGG | + | chr4_3:59780116-59780135 | None:intergenic | 50.0% | |
| TGGTTATCGGTGCAAGAGCT+TGG | + | chr4_3:59780119-59780138 | None:intergenic | 50.0% | |
| ! | AGCTCTTGCACCGATAACCA+AGG | - | chr4_3:59780119-59780138 | Msa0652080:intron | 50.0% |
| ! | TTGATGCACCGGTGGTATCT+TGG | - | chr4_3:59780237-59780256 | Msa0652080:intron | 50.0% |
| GGTGGTATCTTGGCACACTA+AGG | - | chr4_3:59780247-59780266 | Msa0652080:intron | 50.0% | |
| AGCTTTGCTTAAGGTGGGCA+GGG | + | chr4_3:59780862-59780881 | None:intergenic | 50.0% | |
| GCAGGAGCTTTGCTTAAGGT+GGG | + | chr4_3:59780867-59780886 | None:intergenic | 50.0% | |
| AAGGGCAGGAGCTTTGCTTA+AGG | + | chr4_3:59780871-59780890 | None:intergenic | 50.0% | |
| ! | AAAGCTCCTGCCCTTGCTAT+TGG | - | chr4_3:59780876-59780895 | Msa0652080:intron | 50.0% |
| GTGCTGGAGTTTCTACTCCT+TGG | - | chr4_3:59781091-59781110 | Msa0652080:intron | 50.0% | |
| GACGATTGCTCTTGTACGCA+GGG | + | chr4_3:59781562-59781581 | None:intergenic | 50.0% | |
| ! | TGGCCTTGATGGATGCTTTG+AGG | + | chr4_3:59781622-59781641 | None:intergenic | 50.0% |
| ! | CAAAGCATCCATCAAGGCCA+TGG | - | chr4_3:59781622-59781641 | Msa0652080:intron | 50.0% |
| !! | GCCTTAAGGAGTGTTGATGC+TGG | - | chr4_3:59781771-59781790 | Msa0652080:intron | 50.0% |
| CCCAGCATCAACACTCCTTA+AGG | + | chr4_3:59781775-59781794 | None:intergenic | 50.0% | |
| !! | GAGTGTTGATGCTGGGTACA+AGG | - | chr4_3:59781779-59781798 | Msa0652080:intron | 50.0% |
| GGGGCCGTGGCAATTTATAA+TGG | - | chr4_3:59782030-59782049 | Msa0652080:CDS | 50.0% | |
| ! | AAGCCTTATCCCACTAAGGG+GGG | + | chr4_3:59782518-59782537 | None:intergenic | 50.0% |
| ! | CAAGCCTTATCCCACTAAGG+GGG | + | chr4_3:59782519-59782538 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+GGG | + | chr4_3:59782520-59782539 | None:intergenic | 50.0% |
| GCAACAAAGCTGCGGTGAAA+AGG | - | chr4_3:59782668-59782687 | Msa0652080:intron | 50.0% | |
| ! | GATGGTTTCGTTTGGAGCTG+AGG | - | chr4_3:59783095-59783114 | Msa0652080:intron | 50.0% |
| GAGGACTTTGCAGAGCGATT+TGG | - | chr4_3:59783114-59783133 | Msa0652080:intron | 50.0% | |
| ! | GACTTTGCAGAGCGATTTGG+AGG | - | chr4_3:59783117-59783136 | Msa0652080:intron | 50.0% |
| ACAGGAATGACCCTAGAGGA+AGG | + | chr4_3:59783712-59783731 | None:intergenic | 50.0% | |
| CACCCCTTATATTGGTCCAC+CGG | - | chr4_3:59784174-59784193 | Msa0652080:intron | 50.0% | |
| ACCCCTTATATTGGTCCACC+GGG | - | chr4_3:59784175-59784194 | Msa0652080:intron | 50.0% | |
| TTCCCTGCTAAACATTCCCC+CGG | + | chr4_3:59784196-59784215 | None:intergenic | 50.0% | |
| TTGATGTGGCAAGAGGAGAG+AGG | - | chr4_3:59784248-59784267 | Msa0652080:intron | 50.0% | |
| GGACTTCAGTCTACAACCTC+CGG | + | chr4_3:59784301-59784320 | None:intergenic | 50.0% | |
| GGGCAGATCGCAATAAAGGT+GGG | + | chr4_3:59784449-59784468 | None:intergenic | 50.0% | |
| CTAGGGGCAGATCGCAATAA+AGG | + | chr4_3:59784453-59784472 | None:intergenic | 50.0% | |
| AGCCAACACAAGGCAACTAG+GGG | + | chr4_3:59784469-59784488 | None:intergenic | 50.0% | |
| !! | GTTGCCTTGTGTTGGCTTTG+AGG | - | chr4_3:59784472-59784491 | Msa0652080:intron | 50.0% |
| !! | TGCCTTGTGTTGGCTTTGAG+GGG | - | chr4_3:59784474-59784493 | Msa0652080:intron | 50.0% |
| ! | GGGTGGATTTAGTCCCACAT+CGG | - | chr4_3:59784495-59784514 | Msa0652080:intron | 50.0% |
| CTAGGGGCAGATCGCAATAA+AGG | + | chr4_3:59784453-59784472 | None:intergenic | 50.0% | |
| AGCCAACTCAAGGCAACTAG+GGG | + | chr4_3:59784730-59784749 | None:intergenic | 50.0% | |
| !! | GTTGCCTTGAGTTGGCTTTG+AGG | - | chr4_3:59784733-59784752 | Msa0652080:intron | 50.0% |
| !! | TGCCTTGAGTTGGCTTTGAG+GGG | - | chr4_3:59784735-59784754 | Msa0652080:intron | 50.0% |
| ! | GGGTGGATTTAGTCCCACAT+CGG | - | chr4_3:59784495-59784514 | Msa0652080:intron | 50.0% |
| !! | GAAAGGTATTCCCGCTTCAG+GGG | - | chr4_3:59785342-59785361 | Msa0652080:intron | 50.0% |
| !! | ATTCCAGTTAGGGGTGTTCG+CGG | - | chr4_3:59786542-59786561 | Msa0652080:intron | 50.0% |
| !!! | TCCGGTTTGGATCGGTTTTG+AGG | - | chr4_3:59786565-59786584 | Msa0652080:intron | 50.0% |
| CCCTCAAAACCGATCCAAAC+CGG | + | chr4_3:59786569-59786588 | None:intergenic | 50.0% | |
| !!! | CCGGTTTGGATCGGTTTTGA+GGG | - | chr4_3:59786566-59786585 | Msa0652080:intron | 50.0% |
| !!! | CGGTTTGGATCGGTTTTGAG+GGG | - | chr4_3:59786567-59786586 | Msa0652080:intron | 50.0% |
| !!! | TTTTGCGGTTCGGTTCGGTT+TGG | - | chr4_3:59786965-59786984 | Msa0652080:intron | 50.0% |
| ! | AGTTTCAGTGTCGGAACCGG+GGG | + | chr4_3:59776319-59776338 | None:intergenic | 55.0% |
| ! | CAGTTTCAGTGTCGGAACCG+GGG | + | chr4_3:59776320-59776339 | None:intergenic | 55.0% |
| ! | GCAGTTTCAGTGTCGGAACC+GGG | + | chr4_3:59776321-59776340 | None:intergenic | 55.0% |
| !! | TGGTGGTGGTGTGAATGCGA+CGG | + | chr4_3:59776510-59776529 | None:intergenic | 55.0% |
| GTGCGCGTGAAGAACGAAGA+AGG | + | chr4_3:59776573-59776592 | None:intergenic | 55.0% | |
| CGGCATGTGCTAGATGACCA+TGG | + | chr4_3:59777579-59777598 | None:intergenic | 55.0% | |
| GGTCATCTAGCACATGCCGA+TGG | - | chr4_3:59777580-59777599 | Msa0652080:intron | 55.0% | |
| ACTTCGGCGGCATAGAGCAA+TGG | + | chr4_3:59779736-59779755 | None:intergenic | 55.0% | |
| ! | ATCGGTGCAAGAGCTTGGTG+GGG | + | chr4_3:59780114-59780133 | None:intergenic | 55.0% |
| ACAAGCTGTTGATGCACCGG+TGG | - | chr4_3:59780229-59780248 | Msa0652080:intron | 55.0% | |
| TTGCTTAAGGTGGGCAGGGA+GGG | + | chr4_3:59780858-59780877 | None:intergenic | 55.0% | |
| TTTGCTTAAGGTGGGCAGGG+AGG | + | chr4_3:59780859-59780878 | None:intergenic | 55.0% | |
| GAGCTTTGCTTAAGGTGGGC+AGG | + | chr4_3:59780863-59780882 | None:intergenic | 55.0% | |
| GGCAGGAGCTTTGCTTAAGG+TGG | + | chr4_3:59780868-59780887 | None:intergenic | 55.0% | |
| GGACGATTGCTCTTGTACGC+AGG | + | chr4_3:59781563-59781582 | None:intergenic | 55.0% | |
| TGTTACTGAAAAGGGGGCCG+TGG | - | chr4_3:59782017-59782036 | Msa0652080:CDS | 55.0% | |
| ! | CTCCTAAGACTTGCTCCACG+TGG | - | chr4_3:59782230-59782249 | Msa0652080:intron | 55.0% |
| CACCACGTGGAGCAAGTCTT+AGG | + | chr4_3:59782235-59782254 | None:intergenic | 55.0% | |
| ACTAAGGGGGGTCGAGTACA+TGG | + | chr4_3:59782506-59782525 | None:intergenic | 55.0% | |
| ATGTACTCGACCCCCCTTAG+TGG | - | chr4_3:59782505-59782524 | Msa0652080:intron | 55.0% | |
| TGTACTCGACCCCCCTTAGT+GGG | - | chr4_3:59782506-59782525 | Msa0652080:intron | 55.0% | |
| CCCCTTAGTGGGATAAGGCT+TGG | - | chr4_3:59782517-59782536 | Msa0652080:intron | 55.0% | |
| CCCCGGTGGACCAATATAAG+GGG | + | chr4_3:59784179-59784198 | None:intergenic | 55.0% | |
| CCCCTTATATTGGTCCACCG+GGG | - | chr4_3:59784176-59784195 | Msa0652080:intron | 55.0% | |
| CCCCCGGTGGACCAATATAA+GGG | + | chr4_3:59784180-59784199 | None:intergenic | 55.0% | |
| CCCTTATATTGGTCCACCGG+GGG | - | chr4_3:59784177-59784196 | Msa0652080:intron | 55.0% | |
| TCCCCCGGTGGACCAATATA+AGG | + | chr4_3:59784181-59784200 | None:intergenic | 55.0% | |
| CACCGGGGGAATGTTTAGCA+GGG | - | chr4_3:59784191-59784210 | Msa0652080:intron | 55.0% | |
| GTGGCAAGAGGAGAGAGGTT+AGG | - | chr4_3:59784253-59784272 | Msa0652080:intron | 55.0% | |
| TTTGGTAAGGTTTGCGCCGG+AGG | - | chr4_3:59784282-59784301 | Msa0652080:intron | 55.0% | |
| GGGGCAGATCGCAATAAAGG+TGG | + | chr4_3:59784450-59784469 | None:intergenic | 55.0% | |
| TGCCCCTAGTTGCCTTGTGT+TGG | - | chr4_3:59784464-59784483 | Msa0652080:intron | 55.0% | |
| !! | GCCTTGTGTTGGCTTTGAGG+GGG | - | chr4_3:59784475-59784494 | Msa0652080:intron | 55.0% |
| ACCCCCTCAAAGCCAACACA+AGG | + | chr4_3:59784479-59784498 | None:intergenic | 55.0% | |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | - | chr4_3:59784478-59784497 | Msa0652080:intron | 55.0% |
| AATGGGCATGAAGCGTGGCA+AGG | + | chr4_3:59784656-59784675 | None:intergenic | 55.0% | |
| TTGCCACGCTTCATGCCCAT+TGG | - | chr4_3:59784655-59784674 | Msa0652080:intron | 55.0% | |
| TGCCACGCTTCATGCCCATT+GGG | - | chr4_3:59784656-59784675 | Msa0652080:intron | 55.0% | |
| TGCCCCTAGTTGCCTTGAGT+TGG | - | chr4_3:59784725-59784744 | Msa0652080:intron | 55.0% | |
| !! | GCCTTGAGTTGGCTTTGAGG+GGG | - | chr4_3:59784736-59784755 | Msa0652080:intron | 55.0% |
| ACCCCCTCAAAGCCAACTCA+AGG | + | chr4_3:59784740-59784759 | None:intergenic | 55.0% | |
| !! | TTGAGTTGGCTTTGAGGGGG+TGG | - | chr4_3:59784739-59784758 | Msa0652080:intron | 55.0% |
| GCACTCCTCACCTTACAAGC+TGG | - | chr4_3:59784817-59784836 | Msa0652080:intron | 55.0% | |
| !! | ATGTGCGGTTCGGTTCGGTT+TGG | - | chr4_3:59786618-59786637 | Msa0652080:intron | 55.0% |
| !! | CGGTTCGGTTCGGTTTGGTT+CGG | - | chr4_3:59786970-59786989 | Msa0652080:intron | 55.0% |
| ! | GTTTCAGTGTCGGAACCGGG+GGG | + | chr4_3:59776318-59776337 | None:intergenic | 60.0% |
| GTGGTGTGAATGCGACGGAG+AGG | + | chr4_3:59776505-59776524 | None:intergenic | 60.0% | |
| GCAAGAGTAGTTTCCGGCGG+CGG | + | chr4_3:59776533-59776552 | None:intergenic | 60.0% | |
| TTCACGCGCACCACTCTCCA+AGG | - | chr4_3:59776582-59776601 | Msa0652080:intron | 60.0% | |
| GCTGCTCAACCCGTGCACAT+TGG | - | chr4_3:59776791-59776810 | Msa0652080:intron | 60.0% | |
| ATTGGCCGCAGCTTCGGCAT+TGG | + | chr4_3:59776825-59776844 | None:intergenic | 60.0% | |
| AATGCCGAAGCTGCGGCCAA+TGG | - | chr4_3:59776824-59776843 | Msa0652080:intron | 60.0% | |
| TCTGCCATTGGCCGCAGCTT+CGG | + | chr4_3:59776831-59776850 | None:intergenic | 60.0% | |
| CTCTCTAAGCAGCCAGGCTC+TGG | + | chr4_3:59780707-59780726 | None:intergenic | 60.0% | |
| CGACCCCCCTTAGTGGGATA+AGG | - | chr4_3:59782512-59782531 | Msa0652080:intron | 60.0% | |
| CCTGCTAAACATTCCCCCGG+TGG | + | chr4_3:59784193-59784212 | None:intergenic | 60.0% | |
| CCACCGGGGGAATGTTTAGC+AGG | - | chr4_3:59784190-59784209 | Msa0652080:intron | 60.0% | |
| GTTGGAAATCCCGCCTCGAG+CGG | - | chr4_3:59784404-59784423 | Msa0652080:intron | 60.0% | |
| TTGGAAATCCCGCCTCGAGC+GGG | - | chr4_3:59784405-59784424 | Msa0652080:intron | 60.0% | |
| GCACCCCTCACCTTACAAGC+TGG | - | chr4_3:59784556-59784575 | Msa0652080:intron | 60.0% | |
| GACCCAATGGGCATGAAGCG+TGG | + | chr4_3:59784661-59784680 | None:intergenic | 60.0% | |
| CCTTGGGAGCCACAAACCTC+GGG | + | chr4_3:59785805-59785824 | None:intergenic | 60.0% | |
| GCCTTGGGAGCCACAAACCT+CGG | + | chr4_3:59785806-59785825 | None:intergenic | 60.0% | |
| !! | AGTTAGGGGTGTTCGCGGTC+CGG | - | chr4_3:59786547-59786566 | Msa0652080:intron | 60.0% |
| !! | GTTCGCGGTCCGGTTTGGAT+CGG | - | chr4_3:59786557-59786576 | Msa0652080:intron | 60.0% |
| AGAGTAGTTTCCGGCGGCGG+TGG | + | chr4_3:59776530-59776549 | None:intergenic | 65.0% | |
| !! | TTCTGGAGGCACCGTTCCGG+TGG | + | chr4_3:59776759-59776778 | None:intergenic | 65.0% |
| AAATCCCGCCTCGAGCGGGA+GGG | - | chr4_3:59784409-59784428 | Msa0652080:intron | 65.0% | |
| GGGCATGAAGCGTGGCAAGG+CGG | + | chr4_3:59784653-59784672 | None:intergenic | 65.0% | |
| CCCTCACGCTCGGACCCAAT+GGG | + | chr4_3:59784673-59784692 | None:intergenic | 65.0% | |
| CCCATTGGGTCCGAGCGTGA+GGG | - | chr4_3:59784670-59784689 | Msa0652080:intron | 65.0% | |
| CCATTGGGTCCGAGCGTGAG+GGG | - | chr4_3:59784671-59784690 | Msa0652080:intron | 65.0% | |
| CATTGGGTCCGAGCGTGAGG+GGG | - | chr4_3:59784672-59784691 | Msa0652080:intron | 65.0% | |
| ATTGGGTCCGAGCGTGAGGG+GGG | - | chr4_3:59784673-59784692 | Msa0652080:intron | 65.0% | |
| CCCGAGGTTTGTGGCTCCCA+AGG | - | chr4_3:59785802-59785821 | Msa0652080:intron | 65.0% | |
| GGACCGCGAACACCCCTAAC+TGG | + | chr4_3:59786548-59786567 | None:intergenic | 65.0% | |
| ! | CAGTGTCGGAACCGGGGGGA+GGG | + | chr4_3:59776314-59776333 | None:intergenic | 70.0% |
| ! | TCAGTGTCGGAACCGGGGGG+AGG | + | chr4_3:59776315-59776334 | None:intergenic | 70.0% |
| GTAGTTTCCGGCGGCGGTGG+TGG | + | chr4_3:59776527-59776546 | None:intergenic | 70.0% | |
| !! | GGAGGCACCGTTCCGGTGGT+TGG | + | chr4_3:59776755-59776774 | None:intergenic | 70.0% |
| GAAATCCCGCCTCGAGCGGG+AGG | - | chr4_3:59784408-59784427 | Msa0652080:intron | 70.0% | |
| AATCCCGCCTCGAGCGGGAG+GGG | - | chr4_3:59784410-59784429 | Msa0652080:intron | 70.0% | |
| GCCCATTGGGTCCGAGCGTG+AGG | - | chr4_3:59784669-59784688 | Msa0652080:intron | 70.0% | |
| CCCCTCACGCTCGGACCCAA+TGG | + | chr4_3:59784674-59784693 | None:intergenic | 70.0% | |
| TTGGGTCCGAGCGTGAGGGG+GGG | - | chr4_3:59784674-59784693 | Msa0652080:intron | 70.0% | |
| CCAACACCCCCCCTCACGCT+CGG | + | chr4_3:59784683-59784702 | None:intergenic | 70.0% | |
| ! | GGGGTGTTCGCGGTCCGGTT+TGG | - | chr4_3:59786552-59786571 | Msa0652080:intron | 70.0% |
| CACACCACCACCACCGCCGC+CGG | - | chr4_3:59776517-59776536 | Msa0652080:intron | 75.0% | |
| ! | GTTTCCGGCGGCGGTGGTGG+TGG | + | chr4_3:59776524-59776543 | None:intergenic | 75.0% |
| ATCCCGCCTCGAGCGGGAGG+GGG | - | chr4_3:59784411-59784430 | Msa0652080:intron | 75.0% | |
| AACACCCCCCCTCCCGCTCG+AGG | + | chr4_3:59784420-59784439 | None:intergenic | 75.0% | |
| ! | TCGAGCGGGAGGGGGGGTGT+TGG | - | chr4_3:59784419-59784438 | Msa0652080:intron | 75.0% |
| ! | CCGAGCGTGAGGGGGGGTGT+TGG | - | chr4_3:59784680-59784699 | Msa0652080:intron | 75.0% |
| ! | TCCCGCCTCGAGCGGGAGGG+GGG | - | chr4_3:59784412-59784431 | Msa0652080:intron | 80.0% |
| ! | ACCCCCCCTCCCGCTCGAGG+CGG | + | chr4_3:59784417-59784436 | None:intergenic | 80.0% |
| ! | CCCCCCCTCCCGCTCGAGGC+GGG | + | chr4_3:59784416-59784435 | None:intergenic | 85.0% |
| ! | CCCGCCTCGAGCGGGAGGGG+GGG | - | chr4_3:59784413-59784432 | Msa0652080:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 59776311 | 59787346 | 59776311 | ID=Msa0652080;Name=Msa0652080 |
| chr4_3 | mRNA | 59776311 | 59787346 | 59776311 | ID=Msa0652080-mRNA-1;Parent=Msa0652080;Name=Msa0652080-mRNA-1;_AED=0.10;_eAED=0.10;_QI=122|0.8|0.81|1|0.86|0.81|16|345|428 |
| chr4_3 | exon | 59776311 | 59776502 | 59776311 | ID=Msa0652080-mRNA-1:exon:16059;Parent=Msa0652080-mRNA-1 |
| chr4_3 | exon | 59777109 | 59777381 | 59777109 | ID=Msa0652080-mRNA-1:exon:16058;Parent=Msa0652080-mRNA-1 |
| chr4_3 | exon | 59777850 | 59777924 | 59777850 | ID=Msa0652080-mRNA-1:exon:16057;Parent=Msa0652080-mRNA-1 |
| chr4_3 | exon | 59777981 | 59778097 | 59777981 | ID=Msa0652080-mRNA-1:exon:16056;Parent=Msa0652080-mRNA-1 |
| chr4_3 | exon | 59778311 | 59778369 | 59778311 | ID=Msa0652080-mRNA-1:exon:16055;Parent=Msa0652080-mRNA-1 |
| chr4_3 | exon | 59779706 | 59779756 | 59779706 | ID=Msa0652080-mRNA-1:exon:16054;Parent=Msa0652080-mRNA-1 |
| chr4_3 | exon | 59780453 | 59780562 | 59780453 | ID=Msa0652080-mRNA-1:exon:16053;Parent=Msa0652080-mRNA-1 |
| chr4_3 | exon | 59781399 | 59781484 | 59781399 | ID=Msa0652080-mRNA-1:exon:16052;Parent=Msa0652080-mRNA-1 |
| chr4_3 | exon | 59781857 | 59781925 | 59781857 | ID=Msa0652080-mRNA-1:exon:16051;Parent=Msa0652080-mRNA-1 |
| chr4_3 | exon | 59782005 | 59782123 | 59782005 | ID=Msa0652080-mRNA-1:exon:16050;Parent=Msa0652080-mRNA-1 |
| chr4_3 | exon | 59783213 | 59783266 | 59783213 | ID=Msa0652080-mRNA-1:exon:16049;Parent=Msa0652080-mRNA-1 |
| chr4_3 | exon | 59785032 | 59785050 | 59785032 | ID=Msa0652080-mRNA-1:exon:16048;Parent=Msa0652080-mRNA-1 |
| chr4_3 | exon | 59785214 | 59785252 | 59785214 | ID=Msa0652080-mRNA-1:exon:16047;Parent=Msa0652080-mRNA-1 |
| chr4_3 | exon | 59786012 | 59786091 | 59786012 | ID=Msa0652080-mRNA-1:exon:16046;Parent=Msa0652080-mRNA-1 |
| chr4_3 | exon | 59786845 | 59786962 | 59786845 | ID=Msa0652080-mRNA-1:exon:16045;Parent=Msa0652080-mRNA-1 |
| chr4_3 | exon | 59787054 | 59787346 | 59787054 | ID=Msa0652080-mRNA-1:exon:16044;Parent=Msa0652080-mRNA-1 |
| chr4_3 | five_prime_UTR | 59787225 | 59787346 | 59787225 | ID=Msa0652080-mRNA-1:five_prime_utr;Parent=Msa0652080-mRNA-1 |
| chr4_3 | CDS | 59787054 | 59787224 | 59787054 | ID=Msa0652080-mRNA-1:cds;Parent=Msa0652080-mRNA-1 |
| chr4_3 | CDS | 59786845 | 59786962 | 59786845 | ID=Msa0652080-mRNA-1:cds;Parent=Msa0652080-mRNA-1 |
| chr4_3 | CDS | 59786012 | 59786091 | 59786012 | ID=Msa0652080-mRNA-1:cds;Parent=Msa0652080-mRNA-1 |
| chr4_3 | CDS | 59785214 | 59785252 | 59785214 | ID=Msa0652080-mRNA-1:cds;Parent=Msa0652080-mRNA-1 |
| chr4_3 | CDS | 59785032 | 59785050 | 59785032 | ID=Msa0652080-mRNA-1:cds;Parent=Msa0652080-mRNA-1 |
| chr4_3 | CDS | 59783213 | 59783266 | 59783213 | ID=Msa0652080-mRNA-1:cds;Parent=Msa0652080-mRNA-1 |
| chr4_3 | CDS | 59782005 | 59782123 | 59782005 | ID=Msa0652080-mRNA-1:cds;Parent=Msa0652080-mRNA-1 |
| chr4_3 | CDS | 59781857 | 59781925 | 59781857 | ID=Msa0652080-mRNA-1:cds;Parent=Msa0652080-mRNA-1 |
| chr4_3 | CDS | 59781399 | 59781484 | 59781399 | ID=Msa0652080-mRNA-1:cds;Parent=Msa0652080-mRNA-1 |
| chr4_3 | CDS | 59780453 | 59780562 | 59780453 | ID=Msa0652080-mRNA-1:cds;Parent=Msa0652080-mRNA-1 |
| chr4_3 | CDS | 59779706 | 59779756 | 59779706 | ID=Msa0652080-mRNA-1:cds;Parent=Msa0652080-mRNA-1 |
| chr4_3 | CDS | 59778311 | 59778369 | 59778311 | ID=Msa0652080-mRNA-1:cds;Parent=Msa0652080-mRNA-1 |
| chr4_3 | CDS | 59777981 | 59778097 | 59777981 | ID=Msa0652080-mRNA-1:cds;Parent=Msa0652080-mRNA-1 |
| chr4_3 | CDS | 59777850 | 59777924 | 59777850 | ID=Msa0652080-mRNA-1:cds;Parent=Msa0652080-mRNA-1 |
| chr4_3 | CDS | 59777262 | 59777381 | 59777262 | ID=Msa0652080-mRNA-1:cds;Parent=Msa0652080-mRNA-1 |
| chr4_3 | three_prime_UTR | 59777109 | 59777261 | 59777109 | ID=Msa0652080-mRNA-1:three_prime_utr;Parent=Msa0652080-mRNA-1 |
| chr4_3 | three_prime_UTR | 59776311 | 59776502 | 59776311 | ID=Msa0652080-mRNA-1:three_prime_utr;Parent=Msa0652080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
