AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0258410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0258410 MtrunA17_Chr2g0320921 91.736 847 53 4 1 834 1 843 0.0 1499
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0258410 AT5G22640.1 49.880 832 358 12 32 821 50 864 0.0 751
Msa0258410 AT5G22640.2 60.922 499 181 3 32 520 50 544 0.0 645
Msa0258410 AT5G22640.3 51.196 627 249 11 237 821 2 613 0.0 567

Find 221 sgRNAs with CRISPR-Local

Find 621 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGCCATTCTCTCTCTTC+TGG 0.161520 2_2:-54737591 None:intergenic
GGACTGGTGCTTCAGTGTTT+TGG 0.197606 2_2:-54734361 None:intergenic
CCATTCATCCCTCTCATAAT+AGG 0.203599 2_2:-54737664 None:intergenic
TGAACCTTACTTCATAAAAT+TGG 0.221404 2_2:-54739883 None:intergenic
TTGAGAGAGCTTTGGGATAA+TGG 0.233445 2_2:+54734545 Msa0258410:CDS
TGTTACAGGTTCCTGATTAC+TGG 0.234389 2_2:+54739972 Msa0258410:intron
GGTTTGATAACCTAGGAAAA+TGG 0.251822 2_2:+54740863 Msa0258410:CDS
AATTCTTCAATAACATCTTT+AGG 0.263590 2_2:-54734740 None:intergenic
GAAAATTAGTGAAATGAAAA+AGG 0.269320 2_2:+54740900 Msa0258410:CDS
GATATTGCACCATCGAGTTT+TGG 0.272261 2_2:+54741138 Msa0258410:CDS
TGAGAGAGCTTTGGGATAAT+GGG 0.275118 2_2:+54734546 Msa0258410:CDS
ACTAATCATTCTGCTATTAA+AGG 0.278113 2_2:+54734716 Msa0258410:CDS
CGGCTTTCAGCCTACCCTTT+TGG 0.278462 2_2:-54742256 None:intergenic
CTGAAGGGAAGATAATAAAA+AGG 0.282694 2_2:+54737556 Msa0258410:CDS
TTATTTACTTAGCGGTAAAT+AGG 0.287909 2_2:-54734083 None:intergenic
TTCCTATAAGGAAGATAAAA+AGG 0.292162 2_2:-54734674 None:intergenic
TAAAGATGTTATTGAAGAAT+TGG 0.297588 2_2:+54734742 Msa0258410:CDS
GATGAATGGGTTAAGGAGTT+TGG 0.301803 2_2:+54737678 Msa0258410:CDS
TGAGGTTCTCTTTGGATGTT+TGG 0.305532 2_2:-54742497 None:intergenic
TTGTTAAGCAGGACAAATTC+AGG 0.305982 2_2:-54740562 None:intergenic
ATTTGAAGTGAGGTTCTCTT+TGG 0.308838 2_2:-54742505 None:intergenic
TGTGAAGTGGAAGCATTATA+AGG 0.309843 2_2:+54734631 Msa0258410:CDS
CTACATTAATTAAACTTGAA+TGG 0.311924 2_2:+54734111 Msa0258410:five_prime_UTR
CATTCATCCCTCTCATAATA+GGG 0.321040 2_2:-54737663 None:intergenic
TGGCAACCACCTTTGCAAAA+AGG 0.323564 2_2:+54740712 Msa0258410:CDS
GTCAGTTTCCCTCCTGTGAT+TGG 0.326869 2_2:+54742233 Msa0258410:CDS
AGAAGATTTGAGAGAGCTTT+GGG 0.329983 2_2:+54734538 Msa0258410:CDS
TTAGATATGAAGGAACTCTT+TGG 0.332618 2_2:+54735847 Msa0258410:intron
AATGATTGTTGCAGCTTTGA+TGG 0.333289 2_2:-54742122 None:intergenic
TGCAACAATCATTTCCATTC+TGG 0.336605 2_2:+54742132 Msa0258410:CDS
TCTTTCCAATTCTCATCATC+AGG 0.337468 2_2:-54734515 None:intergenic
TAAGGTTGGTTGTTGTTTGC+GGG 0.343226 2_2:-54734183 None:intergenic
GTTGAGTCAAGAAGTTATTC+AGG 0.343371 2_2:+54742299 Msa0258410:CDS
ACTTCAAATTTAAGCTTTGA+AGG 0.350865 2_2:+54742519 Msa0258410:CDS
CAAGCCATTCTCTCTCTTCT+GGG 0.352645 2_2:-54737590 None:intergenic
AAGAAGATTTGAGAGAGCTT+TGG 0.357631 2_2:+54734537 Msa0258410:CDS
GCTAGTGAAGTTGTAGAAAA+TGG 0.357700 2_2:-54741216 None:intergenic
TAATTAAACTTGAATGGAAC+TGG 0.357988 2_2:+54734117 Msa0258410:five_prime_UTR
TTAGTAGGTACAGGAGGAAT+AGG 0.360057 2_2:-54734698 None:intergenic
TCTGGGTCGAATTCGGAGGC+TGG 0.360552 2_2:-54734383 None:intergenic
TTCCACCTGATGATGAGAAT+TGG 0.360876 2_2:+54734510 Msa0258410:CDS
TGAGAAAGTTGACCCTAAAA+AGG 0.365613 2_2:+54740735 Msa0258410:CDS
GATAGAAGCTGAATTATGTT+TGG 0.365778 2_2:+54740948 Msa0258410:CDS
AATGGGAATAACACCATTAC+TGG 0.371101 2_2:+54734563 Msa0258410:CDS
TAGATATGAAGGAACTCTTT+GGG 0.377987 2_2:+54735848 Msa0258410:intron
CGGGTCTTCAGGGTCAGGCT+CGG 0.378073 2_2:-54740590 None:intergenic
CCCTCCTGTGATTGGCCAAA+AGG 0.382992 2_2:+54742241 Msa0258410:CDS
TGTAGAAAATGGTGATTTGC+CGG 0.385046 2_2:-54741205 None:intergenic
TGAGAGGGATGAATGGGTTA+AGG 0.388463 2_2:+54737671 Msa0258410:CDS
TTCGACATCGAGGTCGTCTT+GGG 0.388583 2_2:-54734315 None:intergenic
TTTCAGCTGCACGCTGGTAT+AGG 0.396522 2_2:+54738656 Msa0258410:intron
GATAGTTATCTTCTTGCAAA+TGG 0.399040 2_2:+54737627 Msa0258410:CDS
TATTTAATACCGCTGAAGTT+TGG 0.403494 2_2:-54738547 None:intergenic
TTAATAGCAGAATGATTAGT+AGG 0.408842 2_2:-54734713 None:intergenic
GGAGGAATAGGTTTCCTATA+AGG 0.411609 2_2:-54734686 None:intergenic
TCGAATTCGGAGGCTGGGAC+TGG 0.415203 2_2:-54734377 None:intergenic
TTGGAGTCGGAGGGTGGTGG+TGG 0.417529 2_2:-54734242 None:intergenic
GAGAAACATTGTTGAAGATA+AGG 0.420184 2_2:-54734201 None:intergenic
CTCATCCTTCACACTCCAAC+CGG 0.421667 2_2:+54740640 Msa0258410:CDS
CCTGTTATAGAACCTGTTCC+CGG 0.424006 2_2:+54737412 Msa0258410:CDS
ATTCGACATCGAGGTCGTCT+TGG 0.429381 2_2:-54734316 None:intergenic
GCATGCTGTGGATCATTATA+CGG 0.429585 2_2:-54739812 None:intergenic
CCGGGAACAGGTTCTATAAC+AGG 0.430966 2_2:-54737412 None:intergenic
TATGTTTGGAAGAGGCCATT+GGG 0.431358 2_2:+54740962 Msa0258410:CDS
GTTTGATAACCTAGGAAAAT+GGG 0.431396 2_2:+54740864 Msa0258410:CDS
ATCTTGTTTGACTACAGAAC+CGG 0.434750 2_2:-54741064 None:intergenic
TCAATAACACCATGACCCTC+TGG 0.435554 2_2:-54737379 None:intergenic
TTTGACGGGTCTTCAGGGTC+AGG 0.438983 2_2:-54740595 None:intergenic
ACATACTTGGACCCGGGAAC+AGG 0.442435 2_2:-54737424 None:intergenic
AATATGGAATACGTATGTTC+TGG 0.442630 2_2:+54740692 Msa0258410:CDS
GGGTCTTCAGGGTCAGGCTC+GGG 0.442845 2_2:-54740589 None:intergenic
TAGATAAATTATTTACTTAG+CGG 0.444917 2_2:-54734091 None:intergenic
TTTCTATATCATAGGTATGA+AGG 0.446030 2_2:+54737337 Msa0258410:intron
TGCCAGCTGAGTTGGAATAC+TGG 0.446775 2_2:+54740074 Msa0258410:CDS
TATGTCGAGGATGAGAAATA+TGG 0.449653 2_2:+54740676 Msa0258410:CDS
CACCATTACTGGTACTGGTT+GGG 0.454895 2_2:+54734574 Msa0258410:CDS
AATAACACCATTACTGGTAC+TGG 0.456394 2_2:+54734569 Msa0258410:CDS
GATACCTATGCCAGCTGAGT+TGG 0.457310 2_2:+54740066 Msa0258410:CDS
GATCCAACCTTGTTCCAGAA+TGG 0.459069 2_2:-54742146 None:intergenic
AACATTGTTGAAGATAAGGT+TGG 0.462424 2_2:-54734197 None:intergenic
TCCTCAGGCGTAGCAAAAGC+AGG 0.464185 2_2:-54734599 None:intergenic
CTTCTCCAGATGGACTTGTC+AGG 0.467032 2_2:+54735901 Msa0258410:CDS
GGATGAGTCGGAGTCGGAAT+CGG 0.467762 2_2:-54734273 None:intergenic
ATAAGGTTGGTTGTTGTTTG+CGG 0.468497 2_2:-54734184 None:intergenic
TCATCAGGTGGAAAATCAAA+CGG 0.471502 2_2:-54734500 None:intergenic
ATGTTGTCTAAATCCCTCTC+TGG 0.472786 2_2:-54742434 None:intergenic
GATGATATTGCTCAAGGAAA+AGG 0.473909 2_2:+54735870 Msa0258410:CDS
CACAACTCACCGCAGAGATA+AGG 0.476851 2_2:-54741254 None:intergenic
ATTGCGTAGAAGAGAGAAAG+AGG 0.477384 2_2:+54740999 Msa0258410:CDS
CCTATTATGAGAGGGATGAA+TGG 0.477757 2_2:+54737664 Msa0258410:CDS
GCAGAATGATTAGTAGGTAC+AGG 0.480235 2_2:-54734707 None:intergenic
TTCACATATTCCCATTCCTC+AGG 0.482160 2_2:-54734614 None:intergenic
TCATATGTGTCACACTTTGT+TGG 0.485177 2_2:-54742741 None:intergenic
CAGCTGGCATAGGTATCCTA+AGG 0.486521 2_2:-54740060 None:intergenic
AAATAATGCATTATGCATAC+AGG 0.486979 2_2:-54742679 None:intergenic
CTTTCTATAGATCTCCCCTT+AGG 0.487320 2_2:+54740044 Msa0258410:CDS
GTGAAGTGGAAGCATTATAA+GGG 0.489573 2_2:+54734632 Msa0258410:CDS
GCTCGGGTTCCTTGTTAAGC+AGG 0.489747 2_2:-54740573 None:intergenic
CCTCCTGTGATTGGCCAAAA+GGG 0.490125 2_2:+54742242 Msa0258410:CDS
GGAAGAGGCCATTGGGGACA+TGG 0.491646 2_2:+54740969 Msa0258410:CDS
ACAAACCTGACAAGTCCATC+TGG 0.492218 2_2:-54735906 None:intergenic
GACATAATTGATGATAAATC+CGG 0.492776 2_2:-54740659 None:intergenic
CTGGGTCGAATTCGGAGGCT+GGG 0.494605 2_2:-54734382 None:intergenic
TAAAATTGGTTAATGAAGCC+AGG 0.495775 2_2:-54739869 None:intergenic
CTATTATGAGAGGGATGAAT+GGG 0.496621 2_2:+54737665 Msa0258410:CDS
TTGAAGTCCCCTATTATGAG+AGG 0.496719 2_2:+54737655 Msa0258410:CDS
AGAGAGAGAATGGCTTGATA+AGG 0.498294 2_2:+54737596 Msa0258410:CDS
CTAAACATCATACTTCCATC+TGG 0.499339 2_2:-54738719 None:intergenic
TAGGTTATCAAACCATGGCT+TGG 0.500218 2_2:-54740854 None:intergenic
GATTGAAGAGTTTCTCAAAT+GGG 0.501735 2_2:+54734769 Msa0258410:CDS
AGCTGAATTATGTTTGGAAG+AGG 0.502575 2_2:+54740954 Msa0258410:CDS
TTTCCATTCTGGAACAAGGT+TGG 0.503912 2_2:+54742143 Msa0258410:CDS
GTTCACAAACATGCGAGCCT+TGG 0.504894 2_2:-54738693 None:intergenic
GAACCGGTATCATCTTCATC+TGG 0.507816 2_2:-54741048 None:intergenic
TTATGTTTGGAAGAGGCCAT+TGG 0.510151 2_2:+54740961 Msa0258410:CDS
GAAGAAGCAATGCGAGCTGA+AGG 0.512756 2_2:+54737540 Msa0258410:CDS
GGATTGAAGAGTTTCTCAAA+TGG 0.515739 2_2:+54734768 Msa0258410:CDS
ATCATTTCCATTCTGGAACA+AGG 0.521145 2_2:+54742139 Msa0258410:CDS
TGTCCCCAGAAGAGAGAGAA+TGG 0.525180 2_2:+54737586 Msa0258410:CDS
ACACCATTACTGGTACTGGT+TGG 0.525319 2_2:+54734573 Msa0258410:CDS
CTTCATCTTCTTCATCTACA+CGG 0.528670 2_2:-54741095 None:intergenic
ATACGCGCATGAAGTAGATC+AGG 0.529667 2_2:+54740000 Msa0258410:CDS
ATCAGCGATGTGAAAACAGC+TGG 0.530970 2_2:+54742206 Msa0258410:CDS
CTTTGGGATGATATTGCTCA+AGG 0.531578 2_2:+54735864 Msa0258410:CDS
TTCATCTTCTTCATCTACAC+GGG 0.533739 2_2:-54741094 None:intergenic
AAAGGTCGCTATCGTTATGC+TGG 0.534373 2_2:+54737825 Msa0258410:CDS
CATCAGGTGGAAAATCAAAC+GGG 0.534536 2_2:-54734499 None:intergenic
TGAGTCGGAGTCGGAATCGG+AGG 0.534988 2_2:-54734270 None:intergenic
GCTGCATGCGGCACCAGAGA+GGG 0.535166 2_2:+54742421 Msa0258410:CDS
CAGCATGCTTACTTGTATGA+AGG 0.538200 2_2:+54739827 Msa0258410:CDS
CAAAGCTTAAATTTGAAGTG+AGG 0.539205 2_2:-54742515 None:intergenic
ATCATAGGTATGAAGGTGAA+TGG 0.539261 2_2:+54737344 Msa0258410:intron
AGGTGAAGTTGCTGCTGCCA+AGG 0.539918 2_2:+54738676 Msa0258410:CDS
TGAAGAAGATGAAGATGATG+AGG 0.540232 2_2:+54741104 Msa0258410:CDS
GGTTTCTGATTCTGCGTCGG+AGG 0.541799 2_2:-54734294 None:intergenic
CAGATATACATACTTGGACC+CGG 0.543991 2_2:-54737431 None:intergenic
GTAGAAAATGGTGATTTGCC+GGG 0.546033 2_2:-54741204 None:intergenic
ATGTTATTGAAGAATTGGAT+AGG 0.546328 2_2:+54734747 Msa0258410:CDS
CACCAGTATTCCAACTCAGC+TGG 0.548245 2_2:-54740076 None:intergenic
GGTGTTTATACTTCTCCAGA+TGG 0.549999 2_2:+54735891 Msa0258410:CDS
TTGGGTTTCTGATTCTGCGT+CGG 0.552974 2_2:-54734297 None:intergenic
ATGAAGCATGGGAGGATGCA+TGG 0.553835 2_2:+54737852 Msa0258410:CDS
CTGTTATAGAACCTGTTCCC+GGG 0.558902 2_2:+54737413 Msa0258410:CDS
TGCTTACTTGTATGAAGGAG+AGG 0.559972 2_2:+54739832 Msa0258410:CDS
GAGTCGGAGTCGGAATCGGA+GGG 0.563257 2_2:-54734269 None:intergenic
TGAATTTGTCCTGCTTAACA+AGG 0.563327 2_2:+54740564 Msa0258410:CDS
AGTGTGACACATATGACAAA+TGG 0.568279 2_2:+54742748 Msa0258410:three_prime_UTR
AACAAGGTTGGATCAAAACC+AGG 0.568503 2_2:+54742155 Msa0258410:CDS
TTCCAATTCTCATCATCAGG+TGG 0.569444 2_2:-54734512 None:intergenic
CAATAACACCATGACCCTCT+GGG 0.570495 2_2:-54737378 None:intergenic
TTCTGCGTCGGAGGATGAGT+CGG 0.571987 2_2:-54734285 None:intergenic
GAGGATGTGTGGATGGCACC+TGG 0.574763 2_2:+54739851 Msa0258410:CDS
TTCAGGTGGGAGATTTCTTG+AGG 0.575981 2_2:+54742316 Msa0258410:CDS
AGAAATATTGGATGATGATG+AGG 0.576592 2_2:+54738514 Msa0258410:CDS
GAAATATTGGATGATGATGA+GGG 0.577055 2_2:+54738515 Msa0258410:CDS
TATTCCAACTCAGCTGGCAT+AGG 0.578083 2_2:-54740070 None:intergenic
TTGGAATACTGGTGGTCCAA+AGG 0.580088 2_2:+54740085 Msa0258410:CDS
ATCAAAGACAGATCAGCAGA+AGG 0.580464 2_2:+54741176 Msa0258410:CDS
AAGCTTAAGACGCTCCCATA+CGG 0.582795 2_2:-54740815 None:intergenic
TATGCTGGTCAGATGAAGCA+TGG 0.583444 2_2:+54737840 Msa0258410:CDS
CGAAACGACCCAGAGGGTCA+TGG 0.583757 2_2:+54737370 Msa0258410:CDS
TTGTTCTGGGTCGAATTCGG+AGG 0.585869 2_2:-54734387 None:intergenic
ATGTGATCAATGTGTTGCGC+AGG 0.586670 2_2:-54742185 None:intergenic
TGTATGAAGGAGAGGATGTG+TGG 0.586754 2_2:+54739840 Msa0258410:CDS
GATCAGCAGAAGGGAAAACC+CGG 0.587447 2_2:+54741186 Msa0258410:CDS
CTGTGATTGGCCAAAAGGGT+AGG 0.593200 2_2:+54742246 Msa0258410:CDS
TTTCCTAGGTTATCAAACCA+TGG 0.593326 2_2:-54740859 None:intergenic
GAGTCAAGAAGTTATTCAGG+TGG 0.594211 2_2:+54742302 Msa0258410:CDS
TTGCCAGATGAAGATGATAC+CGG 0.595416 2_2:+54741045 Msa0258410:CDS
CATGGGAGGATGCATGGATG+TGG 0.599968 2_2:+54737858 Msa0258410:CDS
TAACTCTTCCATGTCCCCAA+TGG 0.600348 2_2:-54740977 None:intergenic
TGAAGTCCCCTATTATGAGA+GGG 0.600859 2_2:+54737656 Msa0258410:CDS
AGATATACATACTTGGACCC+GGG 0.601167 2_2:-54737430 None:intergenic
GTCCCAACCAGTACCAGTAA+TGG 0.601866 2_2:-54734576 None:intergenic
TCAAAGACAGATCAGCAGAA+GGG 0.602574 2_2:+54741177 Msa0258410:CDS
AAGAAGCAATGCGAGCTGAA+GGG 0.605218 2_2:+54737541 Msa0258410:CDS
AGTCAAGAAGTTATTCAGGT+GGG 0.607587 2_2:+54742303 Msa0258410:CDS
TAATTGATGATAAATCCGGT+TGG 0.607681 2_2:-54740655 None:intergenic
TCAATAGACCCAAAACTCGA+TGG 0.608158 2_2:-54741147 None:intergenic
TCAAAAGAGCGAAGAATGAG+TGG 0.612655 2_2:+54742389 Msa0258410:CDS
AGCTGGCATAGGTATCCTAA+GGG 0.613587 2_2:-54740059 None:intergenic
TTCTAGCAGCCTTATCTCTG+CGG 0.613883 2_2:+54741245 Msa0258410:CDS
GGCTGCATGCGGCACCAGAG+AGG 0.614419 2_2:+54742420 Msa0258410:CDS
GTCGGAGGATGAGTCGGAGT+CGG 0.616817 2_2:-54734279 None:intergenic
ATTTATCATCAATTATGTCG+AGG 0.618144 2_2:+54740663 Msa0258410:CDS
ATGCTGGTCAGATGAAGCAT+GGG 0.619110 2_2:+54737841 Msa0258410:CDS
TCCTTCGTGTCTCTATGCCG+AGG 0.619254 2_2:-54742600 None:intergenic
TGGCAACATGTGGCTGCATG+CGG 0.619737 2_2:+54742409 Msa0258410:CDS
TGTTGCGCAGGAACTAACCC+TGG 0.620055 2_2:-54742173 None:intergenic
GAATGATTAGTAGGTACAGG+AGG 0.622571 2_2:-54734704 None:intergenic
AGTCATCATAACCATCGGGT+AGG 0.627073 2_2:-54740765 None:intergenic
TAGATCAGGAAAGAGAAATG+TGG 0.627095 2_2:+54740014 Msa0258410:CDS
ATGTTTGTGAACAAGCCAGA+TGG 0.628868 2_2:+54738704 Msa0258410:CDS
TGTCAATTTCAGCTGCACGC+TGG 0.629404 2_2:+54738650 Msa0258410:intron
GTTGGAGTGTGAAGGATGAG+AGG 0.631119 2_2:-54740637 None:intergenic
ATTCATCCCTCTCATAATAG+GGG 0.633266 2_2:-54737662 None:intergenic
TGAAGGAGAGGATGTGTGGA+TGG 0.635250 2_2:+54739844 Msa0258410:CDS
TCATACAAGTAAGCATGCTG+TGG 0.635472 2_2:-54739824 None:intergenic
ATGTTTGGAAGAGGCCATTG+GGG 0.639745 2_2:+54740963 Msa0258410:CDS
AAGCCATTCTCTCTCTTCTG+GGG 0.643213 2_2:-54737589 None:intergenic
CGGTCGAGTCTGAGACATAG+AGG 0.649168 2_2:-54742342 None:intergenic
AAGGGTAGGCTGAAAGCCGT+CGG 0.650840 2_2:+54742260 Msa0258410:CDS
AGGAATGGGAATATGTGAAG+TGG 0.653783 2_2:+54734618 Msa0258410:CDS
GCCTCGGCATAGAGACACGA+AGG 0.653928 2_2:+54742599 Msa0258410:three_prime_UTR
AAGGCTATATTCCTACCCGA+TGG 0.656178 2_2:+54740754 Msa0258410:CDS
CCTCAGGCGTAGCAAAAGCA+GGG 0.658702 2_2:-54734598 None:intergenic
CTGGTCAGATGAAGCATGGG+AGG 0.660225 2_2:+54737844 Msa0258410:CDS
AAGCCATGGTTTGATAACCT+AGG 0.662376 2_2:+54740856 Msa0258410:CDS
AGTCGGAGTCGGAATCGGAG+GGG 0.663708 2_2:-54734268 None:intergenic
TTAAGCAGGACAAATTCAGG+AGG 0.663739 2_2:-54740559 None:intergenic
TGGTTTCGAAACGACCCAGA+GGG 0.666508 2_2:+54737364 Msa0258410:CDS
TAAATCCGGTTGGAGTGTGA+AGG 0.671748 2_2:-54740645 None:intergenic
GTCAAAACTCATATATACTG+AGG 0.684772 2_2:+54740612 Msa0258410:CDS
GAAGAATGAGTGGCAACATG+TGG 0.687291 2_2:+54742399 Msa0258410:CDS
ATGTGATGACCAAACTTCAG+CGG 0.697886 2_2:+54738538 Msa0258410:CDS
TGAGATAAGATTCGACATCG+AGG 0.702508 2_2:-54734325 None:intergenic
CAGCTGAGTTGGAATACTGG+TGG 0.706946 2_2:+54740077 Msa0258410:CDS
ACAAGGTTGGATCAAAACCA+GGG 0.708459 2_2:+54742156 Msa0258410:CDS
ATGGTTTCGAAACGACCCAG+AGG 0.719076 2_2:+54737363 Msa0258410:CDS
GCTGGCATAGGTATCCTAAG+GGG 0.735218 2_2:-54740058 None:intergenic
GCAGTGGTTAGAGAAAAGAG+AGG 0.769842 2_2:+54739788 Msa0258410:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTACCTTTTATTAAAATAA+TGG - chr2_2:54736108-54736127 None:intergenic 10.0%
!!! CTTTTCAAATTTATAAAAAA+AGG + chr2_2:54737970-54737989 Msa0258410:intron 10.0%
!! TTTCAAATTTATAAAAAAAG+GGG + chr2_2:54737972-54737991 Msa0258410:intron 10.0%
!!! ACTTTTTTAAGATAAAAATA+AGG + chr2_2:54738008-54738027 Msa0258410:intron 10.0%
!! TAATAAATATAAAAGAAAAG+AGG - chr2_2:54738458-54738477 None:intergenic 10.0%
!!! GATTTTAATATTCAATAATT+TGG - chr2_2:54740400-54740419 None:intergenic 10.0%
!! TAGATAAATTATTTACTTAG+CGG - chr2_2:54734094-54734113 None:intergenic 15.0%
!! TTAACAACTTACTATAAATT+TGG - chr2_2:54735381-54735400 None:intergenic 15.0%
!! AGATTATAAATATTTCGAAA+AGG - chr2_2:54735472-54735491 None:intergenic 15.0%
!! TTCGAAATATTTATAATCTT+AGG + chr2_2:54735473-54735492 Msa0258410:intron 15.0%
!! TCGAAATATTTATAATCTTA+GGG + chr2_2:54735474-54735493 Msa0258410:intron 15.0%
!!! TAAGCCATTATTTTAATAAA+AGG + chr2_2:54736101-54736120 Msa0258410:intron 15.0%
!!! ATATACTAATATACATGTTT+TGG + chr2_2:54736975-54736994 Msa0258410:intron 15.0%
!! TTCAAATTTATAAAAAAAGG+GGG + chr2_2:54737973-54737992 Msa0258410:intron 15.0%
!!! TAGTTTAAAAGTTTTTTACA+CGG + chr2_2:54738051-54738070 Msa0258410:intron 15.0%
!!! TTTGAGTTAAAAATGTATAA+AGG - chr2_2:54738294-54738313 None:intergenic 15.0%
!!! ATTTTATTTTGGAGAAATAT+TGG + chr2_2:54738502-54738521 Msa0258410:CDS 15.0%
!! AATAATATTAGTAATTTGAG+AGG + chr2_2:54738593-54738612 Msa0258410:intron 15.0%
!! TATATTTATTCAATACCAAT+TGG + chr2_2:54739370-54739389 Msa0258410:intron 15.0%
!!! TATATACAAACCTTTATTTT+CGG + chr2_2:54739397-54739416 Msa0258410:intron 15.0%
!! AAAAAAAAACTGTAACAAAT+GGG - chr2_2:54740120-54740139 None:intergenic 15.0%
!! AAAAAAAAAACTGTAACAAA+TGG - chr2_2:54740121-54740140 None:intergenic 15.0%
!!! TGTTACAGTTTTTTTTTTTT+TGG + chr2_2:54740123-54740142 Msa0258410:intron 15.0%
!!! TATCAAAAATGATTTTTAAC+AGG - chr2_2:54740282-54740301 None:intergenic 15.0%
!!! TTAAAAAGTGATTTTCATTA+TGG + chr2_2:54740317-54740336 Msa0258410:intron 15.0%
!! TCAAAGAATAATACAAAAAT+TGG - chr2_2:54741341-54741360 None:intergenic 15.0%
!! AAATTGACATACAAAATAAT+TGG + chr2_2:54741525-54741544 Msa0258410:intron 15.0%
!! CTACATTAATTAAACTTGAA+TGG + chr2_2:54734111-54734130 Msa0258410:five_prime_UTR 20.0%
!!! GTAGTATTTTTGAACTTTTT+CGG - chr2_2:54734444-54734463 None:intergenic 20.0%
!! AATTCTTCAATAACATCTTT+AGG - chr2_2:54734743-54734762 None:intergenic 20.0%
!! TAAAGATGTTATTGAAGAAT+TGG + chr2_2:54734742-54734761 Msa0258410:CDS 20.0%
!! AACACAATATTTATCTATGT+AGG + chr2_2:54735190-54735209 Msa0258410:intron 20.0%
!! ACACAATATTTATCTATGTA+GGG + chr2_2:54735191-54735210 Msa0258410:intron 20.0%
!! GATTATGAATACTTCATAAA+TGG + chr2_2:54735270-54735289 Msa0258410:intron 20.0%
!! TAGTAAGTTGTTAAAATACA+AGG + chr2_2:54735387-54735406 Msa0258410:intron 20.0%
!! TTAAGCAAATAGTTATTGTT+CGG + chr2_2:54735605-54735624 Msa0258410:intron 20.0%
!!! AATAGGCATTTGTTTTTAAA+GGG - chr2_2:54735759-54735778 None:intergenic 20.0%
!!! AAATAGGCATTTGTTTTTAA+AGG - chr2_2:54735760-54735779 None:intergenic 20.0%
!!! TGCTAAATTTTTAGATATGA+AGG + chr2_2:54735837-54735856 Msa0258410:intron 20.0%
!! ATTACTTGGAAATTTGATAT+AGG + chr2_2:54736613-54736632 Msa0258410:intron 20.0%
!!! AACTTTGATGATGATATATT+TGG + chr2_2:54736760-54736779 Msa0258410:intron 20.0%
!!! ACTTTGATGATGATATATTT+GGG + chr2_2:54736761-54736780 Msa0258410:intron 20.0%
!! CAGTAAATTAATTATGCTTA+TGG + chr2_2:54738265-54738284 Msa0258410:intron 20.0%
!! GAATGAAATATAAGCAAAAA+AGG - chr2_2:54738959-54738978 None:intergenic 20.0%
!!! TTTTTGCTTATATTTCATTC+CGG + chr2_2:54738959-54738978 Msa0258410:intron 20.0%
!!! TTGGTATTGATATGTTTAAA+TGG - chr2_2:54739041-54739060 None:intergenic 20.0%
!! AGAAAACATAAAACCAAAAA+GGG - chr2_2:54739342-54739361 None:intergenic 20.0%
!!! ATATACAAACCTTTATTTTC+GGG + chr2_2:54739398-54739417 Msa0258410:intron 20.0%
!!! TTAATATGCATGTTGATTAT+TGG + chr2_2:54739647-54739666 Msa0258410:intron 20.0%
!! TAACAAGATTAAAAACAGTA+TGG - chr2_2:54739737-54739756 None:intergenic 20.0%
!!! TTAACCAATTTTATGAAGTA+AGG + chr2_2:54739879-54739898 Msa0258410:intron 20.0%
!!! TTTTGAAAATCTGTAACAAA+CGG - chr2_2:54740201-54740220 None:intergenic 20.0%
!! GAAAATTAGTGAAATGAAAA+AGG + chr2_2:54740900-54740919 Msa0258410:CDS 20.0%
!! ACAAAACATATATACACTAA+AGG - chr2_2:54741905-54741924 None:intergenic 20.0%
!!! AATATTTTATCGTTGTCATT+TGG + chr2_2:54742088-54742107 Msa0258410:intron 20.0%
!!! ATGCATAATGCATTATTTTT+TGG + chr2_2:54742684-54742703 Msa0258410:three_prime_UTR 20.0%
! TTATTTACTTAGCGGTAAAT+AGG - chr2_2:54734086-54734105 None:intergenic 25.0%
! TAATTAAACTTGAATGGAAC+TGG + chr2_2:54734117-54734136 Msa0258410:five_prime_UTR 25.0%
! TTCCTATAAGGAAGATAAAA+AGG - chr2_2:54734677-54734696 None:intergenic 25.0%
! TTAATAGCAGAATGATTAGT+AGG - chr2_2:54734716-54734735 None:intergenic 25.0%
! ACTAATCATTCTGCTATTAA+AGG + chr2_2:54734716-54734735 Msa0258410:CDS 25.0%
! ATGTTATTGAAGAATTGGAT+AGG + chr2_2:54734747-54734766 Msa0258410:CDS 25.0%
! TAACAACTAAGTTGTACTTA+CGG - chr2_2:54734893-54734912 None:intergenic 25.0%
! CATAGATAAATATTGTGTTC+TGG - chr2_2:54735189-54735208 None:intergenic 25.0%
! TTAACCACTCATTATCAATT+AGG - chr2_2:54735414-54735433 None:intergenic 25.0%
!! TACAAAATAAGAGACTAGTT+TGG + chr2_2:54735515-54735534 Msa0258410:intron 25.0%
! TTTAGTACAATATTGTCGAA+TGG + chr2_2:54735638-54735657 Msa0258410:intron 25.0%
! TGCATAGAAGAATTTAAACA+AGG + chr2_2:54735678-54735697 Msa0258410:intron 25.0%
! GCATAGAAGAATTTAAACAA+GGG + chr2_2:54735679-54735698 Msa0258410:intron 25.0%
!!! TTGTTTTTGCTACATTGTTT+TGG + chr2_2:54735925-54735944 Msa0258410:intron 25.0%
!! TAGTTATGCTTAAATGGTTT+TGG + chr2_2:54735965-54735984 Msa0258410:intron 25.0%
! AATAAGCTGAACACAATTTA+TGG + chr2_2:54736172-54736191 Msa0258410:intron 25.0%
! ATACAAGTTTAGTTAAACAC+AGG + chr2_2:54736476-54736495 Msa0258410:intron 25.0%
!!! TACTAATATACATGTTTTGG+TGG + chr2_2:54736978-54736997 Msa0258410:intron 25.0%
!!! ACTAATATACATGTTTTGGT+GGG + chr2_2:54736979-54736998 Msa0258410:intron 25.0%
!!! AAGTTCTGTCACTTTTTTTT+GGG - chr2_2:54737110-54737129 None:intergenic 25.0%
!! CAGTGTATTTTCTATATCAT+AGG + chr2_2:54737329-54737348 Msa0258410:intron 25.0%
! TTTCTATATCATAGGTATGA+AGG + chr2_2:54737337-54737356 Msa0258410:intron 25.0%
!! TTGAACACAATTTTAAACTG+TGG - chr2_2:54737472-54737491 None:intergenic 25.0%
! TGAAGGGAAGATAATAAAAA+GGG + chr2_2:54737557-54737576 Msa0258410:CDS 25.0%
! AGAATCAAGAATTGAACTTA+CGG - chr2_2:54737711-54737730 None:intergenic 25.0%
!! TGAAAAAAACTGTATTTTCG+TGG + chr2_2:54737794-54737813 Msa0258410:intron 25.0%
! TTGAAAAGTAAGTTGTTGAT+TGG - chr2_2:54737958-54737977 None:intergenic 25.0%
!! CTTTTGCTTATATTTCATTC+CGG - chr2_2:54738872-54738891 None:intergenic 25.0%
! ATATGATGTAAAGTTCCAAT+TGG - chr2_2:54739130-54739149 None:intergenic 25.0%
!! TTTATTGATAACACTCGATA+TGG + chr2_2:54739149-54739168 Msa0258410:intron 25.0%
! CAGAAAACATAAAACCAAAA+AGG - chr2_2:54739343-54739362 None:intergenic 25.0%
!!! TTGGTTTTATGTTTTCTGTT+AGG + chr2_2:54739345-54739364 Msa0258410:intron 25.0%
! GTTTGTATATAATTGCCAAT+TGG - chr2_2:54739388-54739407 None:intergenic 25.0%
!!! ATTCCACTATAATTGTTTTG+AGG + chr2_2:54739515-54739534 Msa0258410:intron 25.0%
! TGAACCTTACTTCATAAAAT+TGG - chr2_2:54739886-54739905 None:intergenic 25.0%
!!! GCTTATTTTCATTTTATGCA+AGG + chr2_2:54739927-54739946 Msa0258410:intron 25.0%
!!! TCAGTATATATGAGTTTTGA+CGG - chr2_2:54740613-54740632 None:intergenic 25.0%
!! GACATAATTGATGATAAATC+CGG - chr2_2:54740662-54740681 None:intergenic 25.0%
! ATTTATCATCAATTATGTCG+AGG + chr2_2:54740663-54740682 Msa0258410:CDS 25.0%
! AAAAAAGTCATCATAACCAT+CGG - chr2_2:54740773-54740792 None:intergenic 25.0%
!!! ATGGTTATGATGACTTTTTT+GGG + chr2_2:54740773-54740792 Msa0258410:CDS 25.0%
! AATTAGTGAAATGAAAAAGG+AGG + chr2_2:54740903-54740922 Msa0258410:CDS 25.0%
! AACTTTATAAAACTGCTCAA+TGG - chr2_2:54741300-54741319 None:intergenic 25.0%
!!! TTTTTTACAAGTTAGCTTAC+AGG + chr2_2:54741379-54741398 Msa0258410:intron 25.0%
! GGTTAATTACATTCAATGAA+TGG - chr2_2:54741627-54741646 None:intergenic 25.0%
!!! CAACTCTAAAGTTGAAATTA+GGG + chr2_2:54741834-54741853 Msa0258410:intron 25.0%
!! AGTGTATATATGTTTTGTGA+AGG + chr2_2:54741907-54741926 Msa0258410:intron 25.0%
! TTGTGTATAACTGTATATCT+CGG + chr2_2:54741949-54741968 Msa0258410:intron 25.0%
! CAATTCTACATATTGAAATG+AGG - chr2_2:54742035-54742054 None:intergenic 25.0%
!! ACTTCAAATTTAAGCTTTGA+AGG + chr2_2:54742519-54742538 Msa0258410:CDS 25.0%
! AAATAATGCATTATGCATAC+AGG - chr2_2:54742682-54742701 None:intergenic 25.0%
!!! CATTTTAAAGTTGTGCAAAA+AGG - chr2_2:54742721-54742740 None:intergenic 25.0%
AACATTGTTGAAGATAAGGT+TGG - chr2_2:54734200-54734219 None:intergenic 30.0%
GAGAAACATTGTTGAAGATA+AGG - chr2_2:54734204-54734223 None:intergenic 30.0%
! CTCCTTTTTATCTTCCTTAT+AGG + chr2_2:54734672-54734691 Msa0258410:CDS 30.0%
GATTGAAGAGTTTCTCAAAT+GGG + chr2_2:54734769-54734788 Msa0258410:CDS 30.0%
!! GTTAGCTATGTTTTTGAAGA+TGG + chr2_2:54734791-54734810 Msa0258410:CDS 30.0%
AACAACTAAGTTGTACTTAC+GGG - chr2_2:54734892-54734911 None:intergenic 30.0%
! TCTCTCTCTCATCTTATTTA+TGG - chr2_2:54735087-54735106 None:intergenic 30.0%
CAATATTTATCTATGTAGGG+CGG + chr2_2:54735194-54735213 Msa0258410:intron 30.0%
GCTCAAATAATAAACATGCT+TGG + chr2_2:54735216-54735235 Msa0258410:intron 30.0%
TGAGTAAAATTAACCAGAGT+CGG - chr2_2:54735297-54735316 None:intergenic 30.0%
! GAGACTAAATTGATAGTAAG+TGG + chr2_2:54735342-54735361 Msa0258410:intron 30.0%
!! AAAATAAGAGACTAGTTTGG+TGG + chr2_2:54735518-54735537 Msa0258410:intron 30.0%
ATAGTTATTGTTCGGCAATA+AGG + chr2_2:54735613-54735632 Msa0258410:intron 30.0%
TTAGATATGAAGGAACTCTT+TGG + chr2_2:54735847-54735866 Msa0258410:intron 30.0%
TAGATATGAAGGAACTCTTT+GGG + chr2_2:54735848-54735867 Msa0258410:intron 30.0%
TGCTGTTAGTTATGCTTAAA+TGG + chr2_2:54735959-54735978 Msa0258410:intron 30.0%
!!! TTATGCTTAAATGGTTTTGG+TGG + chr2_2:54735968-54735987 Msa0258410:intron 30.0%
AACAAGATAGAATGAGATAC+AGG + chr2_2:54736010-54736029 Msa0258410:intron 30.0%
AACGATCAGATTACTATCAA+TGG - chr2_2:54736365-54736384 None:intergenic 30.0%
AACTAAACTTGTATTGCCTA+CGG - chr2_2:54736470-54736489 None:intergenic 30.0%
CAAATTTCCAAGTAATGTGT+TGG - chr2_2:54736609-54736628 None:intergenic 30.0%
ACTTGGAAATTTGATATAGG+CGG + chr2_2:54736616-54736635 Msa0258410:intron 30.0%
GTAACTAAGTTTGTCAAAGT+AGG - chr2_2:54736706-54736725 None:intergenic 30.0%
TTGAGTATATTTGTCTCAGT+TGG + chr2_2:54736836-54736855 Msa0258410:intron 30.0%
TGAGTATATTTGTCTCAGTT+GGG + chr2_2:54736837-54736856 Msa0258410:intron 30.0%
!!! CTAATATACATGTTTTGGTG+GGG + chr2_2:54736980-54736999 Msa0258410:intron 30.0%
!!! TAATATACATGTTTTGGTGG+GGG + chr2_2:54736981-54737000 Msa0258410:intron 30.0%
!!! CAAGTTCTGTCACTTTTTTT+TGG - chr2_2:54737111-54737130 None:intergenic 30.0%
! TCTATTTGTCATGTTTTCTG+CGG + chr2_2:54737154-54737173 Msa0258410:intron 30.0%
CCATTATCAAACAAAGTCAA+AGG - chr2_2:54737200-54737219 None:intergenic 30.0%
! CCTTTGACTTTGTTTGATAA+TGG + chr2_2:54737197-54737216 Msa0258410:intron 30.0%
AGACTTCAGATATACATACT+TGG - chr2_2:54737440-54737459 None:intergenic 30.0%
CTGAAGGGAAGATAATAAAA+AGG + chr2_2:54737556-54737575 Msa0258410:CDS 30.0%
GATAGTTATCTTCTTGCAAA+TGG + chr2_2:54737627-54737646 Msa0258410:CDS 30.0%
AATGACCGTATCATATATGT+AGG + chr2_2:54737894-54737913 Msa0258410:intron 30.0%
ATGGACCTACATATATGATA+CGG - chr2_2:54737902-54737921 None:intergenic 30.0%
CATAAACTTTATCTACTCCA+TGG - chr2_2:54737921-54737940 None:intergenic 30.0%
ATTTATAAAAAAAGGGGGAG+AGG + chr2_2:54737978-54737997 Msa0258410:intron 30.0%
AAGGTTCAATCACATAAATC+AGG - chr2_2:54738347-54738366 None:intergenic 30.0%
AACCTTGCAACTAAATTCAA+AGG + chr2_2:54738361-54738380 Msa0258410:intron 30.0%
AACCTTTGAATTTAGTTGCA+AGG - chr2_2:54738366-54738385 None:intergenic 30.0%
TGCAACTAAATTCAAAGGTT+AGG + chr2_2:54738366-54738385 Msa0258410:intron 30.0%
ATCTTACTTGACTCACATAT+AGG + chr2_2:54738429-54738448 Msa0258410:intron 30.0%
AAAATAAAATCTACCCTGCA+TGG - chr2_2:54738492-54738511 None:intergenic 30.0%
!! ATGCAGGGTAGATTTTATTT+TGG + chr2_2:54738491-54738510 Msa0258410:intron 30.0%
! AGAAATATTGGATGATGATG+AGG + chr2_2:54738514-54738533 Msa0258410:CDS 30.0%
! GAAATATTGGATGATGATGA+GGG + chr2_2:54738515-54738534 Msa0258410:CDS 30.0%
TATTTAATACCGCTGAAGTT+TGG - chr2_2:54738550-54738569 None:intergenic 30.0%
TATTAGTAATTTGAGAGGTG+TGG + chr2_2:54738598-54738617 Msa0258410:intron 30.0%
AAAACAAAACCATGAATACG+AGG - chr2_2:54738770-54738789 None:intergenic 30.0%
!!! CGTATTCATGGTTTTGTTTT+TGG + chr2_2:54738770-54738789 Msa0258410:intron 30.0%
AGTTGAAAAGTCAATGTATG+TGG + chr2_2:54738896-54738915 Msa0258410:intron 30.0%
GATATGTTTAAATGGCAAGA+AGG - chr2_2:54739033-54739052 None:intergenic 30.0%
GTCATGATATAAAGACCAAT+TGG + chr2_2:54739112-54739131 Msa0258410:intron 30.0%
! TAGTCCTTTTCATTACTCTT+GGG + chr2_2:54739274-54739293 Msa0258410:intron 30.0%
AAAACCCAAGAGTAATGAAA+AGG - chr2_2:54739281-54739300 None:intergenic 30.0%
AAGAAGAAACCCGAAAATAA+AGG - chr2_2:54739410-54739429 None:intergenic 30.0%
TTGTTGAGATGATTGTCAAA+GGG - chr2_2:54739616-54739635 None:intergenic 30.0%
ATTGTTGAGATGATTGTCAA+AGG - chr2_2:54739617-54739636 None:intergenic 30.0%
ATCATCTCAACAATTGATGA+TGG + chr2_2:54739623-54739642 Msa0258410:intron 30.0%
TAAAATTGGTTAATGAAGCC+AGG - chr2_2:54739872-54739891 None:intergenic 30.0%
ACAGAAAAAGAGAAAGACTA+AGG - chr2_2:54740451-54740470 None:intergenic 30.0%
TGTATGAACAAGTACACAAT+TGG + chr2_2:54740468-54740487 Msa0258410:intron 30.0%
!! CAGTATATATGAGTTTTGAC+GGG - chr2_2:54740612-54740631 None:intergenic 30.0%
GTCAAAACTCATATATACTG+AGG + chr2_2:54740612-54740631 Msa0258410:CDS 30.0%
! TAATTGATGATAAATCCGGT+TGG - chr2_2:54740658-54740677 None:intergenic 30.0%
AATATGGAATACGTATGTTC+TGG + chr2_2:54740692-54740711 Msa0258410:CDS 30.0%
! GTAGGAATATAGCCTTTTTA+GGG - chr2_2:54740750-54740769 None:intergenic 30.0%
AAAAAGTCATCATAACCATC+GGG - chr2_2:54740772-54740791 None:intergenic 30.0%
!!! GATGGTTATGATGACTTTTT+TGG + chr2_2:54740772-54740791 Msa0258410:CDS 30.0%
ATAAGAACAAAAAGACCGTA+TGG + chr2_2:54740800-54740819 Msa0258410:CDS 30.0%
TAAGAACAAAAAGACCGTAT+GGG + chr2_2:54740801-54740820 Msa0258410:CDS 30.0%
! GTTTGATAACCTAGGAAAAT+GGG + chr2_2:54740864-54740883 Msa0258410:CDS 30.0%
GATAGAAGCTGAATTATGTT+TGG + chr2_2:54740948-54740967 Msa0258410:CDS 30.0%
!! CAGATTTTAAGAATCACATG+AGG + chr2_2:54741456-54741475 Msa0258410:intron 30.0%
ATGATACTTTGACACAAGAA+TGG - chr2_2:54741783-54741802 None:intergenic 30.0%
!! CCTAATTTCAACTTTAGAGT+TGG - chr2_2:54741836-54741855 None:intergenic 30.0%
!! CCAACTCTAAAGTTGAAATT+AGG + chr2_2:54741833-54741852 Msa0258410:intron 30.0%
TATTGAAATGAGGTGCAATT+AGG - chr2_2:54742025-54742044 None:intergenic 30.0%
AGAATTGAAACTGTTTGAGT+TGG + chr2_2:54742048-54742067 Msa0258410:intron 30.0%
!!! CTTTTTGAAGTCGTATAACA+CGG - chr2_2:54742365-54742384 None:intergenic 30.0%
! CAAAGCTTAAATTTGAAGTG+AGG - chr2_2:54742518-54742537 None:intergenic 30.0%
!!! ACTCATTTTTTGGTACACAA+GGG - chr2_2:54742566-54742585 None:intergenic 30.0%
!! ATAAGGTTGGTTGTTGTTTG+CGG - chr2_2:54734187-54734206 None:intergenic 35.0%
!!! CGTCTTTGAAGTTTTGTTCT+GGG - chr2_2:54734403-54734422 None:intergenic 35.0%
!!! ACGTCTTTGAAGTTTTGTTC+TGG - chr2_2:54734404-54734423 None:intergenic 35.0%
TCATCAGGTGGAAAATCAAA+CGG - chr2_2:54734503-54734522 None:intergenic 35.0%
TCTTTCCAATTCTCATCATC+AGG - chr2_2:54734518-54734537 None:intergenic 35.0%
AAGAAGATTTGAGAGAGCTT+TGG + chr2_2:54734537-54734556 Msa0258410:CDS 35.0%
AGAAGATTTGAGAGAGCTTT+GGG + chr2_2:54734538-54734557 Msa0258410:CDS 35.0%
AATGGGAATAACACCATTAC+TGG + chr2_2:54734563-54734582 Msa0258410:CDS 35.0%
AATAACACCATTACTGGTAC+TGG + chr2_2:54734569-54734588 Msa0258410:CDS 35.0%
!! TGTGAAGTGGAAGCATTATA+AGG + chr2_2:54734631-54734650 Msa0258410:CDS 35.0%
!! GTGAAGTGGAAGCATTATAA+GGG + chr2_2:54734632-54734651 Msa0258410:CDS 35.0%
GGAAGATAAAAAGGAGCAAT+AGG - chr2_2:54734668-54734687 None:intergenic 35.0%
GGATTGAAGAGTTTCTCAAA+TGG + chr2_2:54734768-54734787 Msa0258410:CDS 35.0%
! TAGCTGCATTGACGTTAATA+TGG + chr2_2:54734911-54734930 Msa0258410:intron 35.0%
! TGCATTGACGTTAATATGGA+TGG + chr2_2:54734915-54734934 Msa0258410:intron 35.0%
! GCATTGACGTTAATATGGAT+GGG + chr2_2:54734916-54734935 Msa0258410:intron 35.0%
GAGAATCACATGTTCAATCT+CGG - chr2_2:54734952-54734971 None:intergenic 35.0%
!! GAGATTCACTGACTTTAAGA+CGG + chr2_2:54735008-54735027 Msa0258410:intron 35.0%
!! AGATTCACTGACTTTAAGAC+GGG + chr2_2:54735009-54735028 Msa0258410:intron 35.0%
TAGTGGCTATACTCACAAAT+TGG - chr2_2:54735156-54735175 None:intergenic 35.0%
GTTCTGGTCAAATAATCTAG+TGG - chr2_2:54735173-54735192 None:intergenic 35.0%
!! ATAAACATGCTTGGCTTTGT+AGG + chr2_2:54735225-54735244 Msa0258410:intron 35.0%
!! TAAACATGCTTGGCTTTGTA+GGG + chr2_2:54735226-54735245 Msa0258410:intron 35.0%
!! TTTGTAGGGTGCTCTAAAAT+AGG + chr2_2:54735240-54735259 Msa0258410:intron 35.0%
GAGTAAAATTAACCAGAGTC+GGG - chr2_2:54735296-54735315 None:intergenic 35.0%
!! AGGACCTAATTGATAATGAG+TGG + chr2_2:54735407-54735426 Msa0258410:intron 35.0%
TTGACAGCTTGATAGAGATA+AGG + chr2_2:54735445-54735464 Msa0258410:intron 35.0%
!! TGTTCAGTGTTGGTAAATAG+AGG + chr2_2:54735565-54735584 Msa0258410:intron 35.0%
AGTACAATATTGTCGAATGG+TGG + chr2_2:54735641-54735660 Msa0258410:intron 35.0%
! AACAAATGCCTATTTTGTGC+CGG + chr2_2:54735765-54735784 Msa0258410:intron 35.0%
GATGATATTGCTCAAGGAAA+AGG + chr2_2:54735870-54735889 Msa0258410:CDS 35.0%
!!! TTAAATGGTTTTGGTGGTAG+TGG + chr2_2:54735974-54735993 Msa0258410:intron 35.0%
AGACAATTACGGTACTGTTT+GGG - chr2_2:54736227-54736246 None:intergenic 35.0%
!!! CTTTTAGGATGTTACGACAA+TGG + chr2_2:54736270-54736289 Msa0258410:intron 35.0%
AATCGTGAATGTATTTCCGT+AGG + chr2_2:54736300-54736319 Msa0258410:intron 35.0%
ATCGTGAATGTATTTCCGTA+GGG + chr2_2:54736301-54736320 Msa0258410:intron 35.0%
TAGTTAAACACAGGACTGAT+AGG + chr2_2:54736485-54736504 Msa0258410:intron 35.0%
AGTTAAACACAGGACTGATA+GGG + chr2_2:54736486-54736505 Msa0258410:intron 35.0%
GACATAGCATATGTACTATC+AGG - chr2_2:54736539-54736558 None:intergenic 35.0%
GACAAACTTAGTTACAGAGA+AGG + chr2_2:54736711-54736730 Msa0258410:intron 35.0%
AAACTTAGTTACAGAGAAGG+AGG + chr2_2:54736714-54736733 Msa0258410:intron 35.0%
!!! AATATACATGTTTTGGTGGG+GGG + chr2_2:54736982-54737001 Msa0258410:intron 35.0%
GGATAACACTTCGTATTCAA+TGG - chr2_2:54737073-54737092 None:intergenic 35.0%
! ATACGAAGTGTTATCCAAGT+TGG + chr2_2:54737077-54737096 Msa0258410:intron 35.0%
GAAGCTAATACATCTAATGC+AGG - chr2_2:54737253-54737272 None:intergenic 35.0%
ATCATAGGTATGAAGGTGAA+TGG + chr2_2:54737344-54737363 Msa0258410:intron 35.0%
ATTCATCCCTCTCATAATAG+GGG - chr2_2:54737665-54737684 None:intergenic 35.0%
CATTCATCCCTCTCATAATA+GGG - chr2_2:54737666-54737685 None:intergenic 35.0%
CTATTATGAGAGGGATGAAT+GGG + chr2_2:54737665-54737684 Msa0258410:CDS 35.0%
! ATGCTGCATTGTCTCTATTT+TGG + chr2_2:54737744-54737763 Msa0258410:intron 35.0%
GTATCATATATGTAGGTCCA+TGG + chr2_2:54737901-54737920 Msa0258410:intron 35.0%
GTTCAATCACATAAATCAGG+TGG - chr2_2:54738344-54738363 None:intergenic 35.0%
ATGCTAGTCATCTCAACATA+AGG + chr2_2:54738391-54738410 Msa0258410:intron 35.0%
TGCTAGTCATCTCAACATAA+GGG + chr2_2:54738392-54738411 Msa0258410:intron 35.0%
CTAAACATCATACTTCCATC+TGG - chr2_2:54738722-54738741 None:intergenic 35.0%
AATTGAAAGCCTCGTATTCA+TGG + chr2_2:54738758-54738777 Msa0258410:intron 35.0%
GTAACATGTGTGCTAATGAA+TGG - chr2_2:54738827-54738846 None:intergenic 35.0%
TGCTTATATTTCATTCCGGA+GGG - chr2_2:54738963-54738982 None:intergenic 35.0%
TTGCTTATATTTCATTCCGG+AGG - chr2_2:54738962-54738981 None:intergenic 35.0%
TGCTTATATTTCATTCCGGA+TGG + chr2_2:54738963-54738982 Msa0258410:intron 35.0%
GGGTGTTCTTAAATCTTACT+TGG - chr2_2:54739060-54739079 None:intergenic 35.0%
CACAAATTGGAAAAGAACAC+TGG - chr2_2:54739087-54739106 None:intergenic 35.0%
! CAGTGTTCTTTTCCAATTTG+TGG + chr2_2:54739085-54739104 Msa0258410:intron 35.0%
ATCATGACTTAGCCACAAAT+TGG - chr2_2:54739100-54739119 None:intergenic 35.0%
AACATGCAGAACAAAGCAAT+TGG - chr2_2:54739240-54739259 None:intergenic 35.0%
! CTAGTCCTTTTCATTACTCT+TGG + chr2_2:54739273-54739292 Msa0258410:intron 35.0%
CGACCTCAAAACAATTATAG+TGG - chr2_2:54739521-54739540 None:intergenic 35.0%
ATGATTGTCAAAGGGTAAAG+AGG - chr2_2:54739608-54739627 None:intergenic 35.0%
! AAGATATTTTGTCTGTGCAG+TGG + chr2_2:54739772-54739791 Msa0258410:intron 35.0%
CATGCATATGATTCTGTTAC+AGG + chr2_2:54739958-54739977 Msa0258410:intron 35.0%
TAGATCAGGAAAGAGAAATG+TGG + chr2_2:54740014-54740033 Msa0258410:CDS 35.0%
!! AAATGGGCTCTAAATACCTT+TGG - chr2_2:54740104-54740123 None:intergenic 35.0%
! AGACTAAGGTCTGTTTGTTA+CGG - chr2_2:54740437-54740456 None:intergenic 35.0%
TTGTTAAGCAGGACAAATTC+AGG - chr2_2:54740565-54740584 None:intergenic 35.0%
TGAATTTGTCCTGCTTAACA+AGG + chr2_2:54740564-54740583 Msa0258410:CDS 35.0%
TATGTCGAGGATGAGAAATA+TGG + chr2_2:54740676-54740695 Msa0258410:CDS 35.0%
! ACTTTCTCACCTTTTTGCAA+AGG - chr2_2:54740724-54740743 None:intergenic 35.0%
TGAGAAAGTTGACCCTAAAA+AGG + chr2_2:54740735-54740754 Msa0258410:CDS 35.0%
! GGTAGGAATATAGCCTTTTT+AGG - chr2_2:54740751-54740770 None:intergenic 35.0%
TTTCCTAGGTTATCAAACCA+TGG - chr2_2:54740862-54740881 None:intergenic 35.0%
! GGTTTGATAACCTAGGAAAA+TGG + chr2_2:54740863-54740882 Msa0258410:CDS 35.0%
AGCTGAATTATGTTTGGAAG+AGG + chr2_2:54740954-54740973 Msa0258410:CDS 35.0%
AGAGAAAGAGGAGAAAAAGA+AGG + chr2_2:54741011-54741030 Msa0258410:CDS 35.0%
! ATCTTGTTTGACTACAGAAC+CGG - chr2_2:54741067-54741086 None:intergenic 35.0%
TTCATCTTCTTCATCTACAC+GGG - chr2_2:54741097-54741116 None:intergenic 35.0%
CTTCATCTTCTTCATCTACA+CGG - chr2_2:54741098-54741117 None:intergenic 35.0%
TGAAGAAGATGAAGATGATG+AGG + chr2_2:54741104-54741123 Msa0258410:CDS 35.0%
! ATATTGCACCATCGAGTTTT+GGG + chr2_2:54741139-54741158 Msa0258410:CDS 35.0%
! TGTAGAAAATGGTGATTTGC+CGG - chr2_2:54741208-54741227 None:intergenic 35.0%
GCTAGTGAAGTTGTAGAAAA+TGG - chr2_2:54741219-54741238 None:intergenic 35.0%
GTTAACGAACAACAAAGACA+TGG + chr2_2:54741547-54741566 Msa0258410:intron 35.0%
TTAACCACAAATTCGATCAG+TGG + chr2_2:54741641-54741660 Msa0258410:intron 35.0%
TTAACCACTGATCGAATTTG+TGG - chr2_2:54741648-54741667 None:intergenic 35.0%
! ATGACATATGTTTTGCTCCT+TGG - chr2_2:54741993-54742012 None:intergenic 35.0%
GAGCAAAACATATGTCATGT+TGG + chr2_2:54741995-54742014 Msa0258410:intron 35.0%
! AATGATTGTTGCAGCTTTGA+TGG - chr2_2:54742125-54742144 None:intergenic 35.0%
TGCAACAATCATTTCCATTC+TGG + chr2_2:54742132-54742151 Msa0258410:CDS 35.0%
!! ATCATTTCCATTCTGGAACA+AGG + chr2_2:54742139-54742158 Msa0258410:CDS 35.0%
! TTTTTCATGTGCTTTACCGA+CGG - chr2_2:54742279-54742298 None:intergenic 35.0%
GTTGAGTCAAGAAGTTATTC+AGG + chr2_2:54742299-54742318 Msa0258410:CDS 35.0%
AGTCAAGAAGTTATTCAGGT+GGG + chr2_2:54742303-54742322 Msa0258410:CDS 35.0%
! ATTTGAAGTGAGGTTCTCTT+TGG - chr2_2:54742508-54742527 None:intergenic 35.0%
!!! GGCCATTTTTATTCTTAGCT+AGG + chr2_2:54742540-54742559 Msa0258410:three_prime_UTR 35.0%
GGCCTAGCTAAGAATAAAAA+TGG - chr2_2:54742545-54742564 None:intergenic 35.0%
!!! CACTCATTTTTTGGTACACA+AGG - chr2_2:54742567-54742586 None:intergenic 35.0%
ACCAAAAAATGAGTGAGCAT+AGG + chr2_2:54742572-54742591 Msa0258410:three_prime_UTR 35.0%
!!! ACCTATGCTCACTCATTTTT+TGG - chr2_2:54742576-54742595 None:intergenic 35.0%
TCATATGTGTCACACTTTGT+TGG - chr2_2:54742744-54742763 None:intergenic 35.0%
AGTGTGACACATATGACAAA+TGG + chr2_2:54742748-54742767 Msa0258410:three_prime_UTR 35.0%
!! TAAGGTTGGTTGTTGTTTGC+GGG - chr2_2:54734186-54734205 None:intergenic 40.0%
TGAGATAAGATTCGACATCG+AGG - chr2_2:54734328-54734347 None:intergenic 40.0%
!! GTTTTGTTCTGGGTCGAATT+CGG - chr2_2:54734393-54734412 None:intergenic 40.0%
CATCAGGTGGAAAATCAAAC+GGG - chr2_2:54734502-54734521 None:intergenic 40.0%
! TTCCACCTGATGATGAGAAT+TGG + chr2_2:54734510-54734529 Msa0258410:CDS 40.0%
TTCCAATTCTCATCATCAGG+TGG - chr2_2:54734515-54734534 None:intergenic 40.0%
!! TTGAGAGAGCTTTGGGATAA+TGG + chr2_2:54734545-54734564 Msa0258410:CDS 40.0%
!! TGAGAGAGCTTTGGGATAAT+GGG + chr2_2:54734546-54734565 Msa0258410:CDS 40.0%
TTCACATATTCCCATTCCTC+AGG - chr2_2:54734617-54734636 None:intergenic 40.0%
AGGAATGGGAATATGTGAAG+TGG + chr2_2:54734618-54734637 Msa0258410:CDS 40.0%
GGAGGAATAGGTTTCCTATA+AGG - chr2_2:54734689-54734708 None:intergenic 40.0%
TTAGTAGGTACAGGAGGAAT+AGG - chr2_2:54734701-54734720 None:intergenic 40.0%
GAATGATTAGTAGGTACAGG+AGG - chr2_2:54734707-54734726 None:intergenic 40.0%
GCAGAATGATTAGTAGGTAC+AGG - chr2_2:54734710-54734729 None:intergenic 40.0%
TCTCTCCTTCTCCACATTTA+AGG + chr2_2:54734968-54734987 Msa0258410:intron 40.0%
!! GTCTCTGTTTTGTTCAGTGT+TGG + chr2_2:54735555-54735574 Msa0258410:intron 40.0%
GGTAAATAGAGGCTATTGCA+AGG + chr2_2:54735576-54735595 Msa0258410:intron 40.0%
AAATAGAGGCTATTGCAAGG+TGG + chr2_2:54735579-54735598 Msa0258410:intron 40.0%
CTTCTTATCAAGTGTCCTTC+GGG - chr2_2:54735720-54735739 None:intergenic 40.0%
GCTTCTTATCAAGTGTCCTT+CGG - chr2_2:54735721-54735740 None:intergenic 40.0%
!! CTTTGGGATGATATTGCTCA+AGG + chr2_2:54735864-54735883 Msa0258410:CDS 40.0%
GGTGTTTATACTTCTCCAGA+TGG + chr2_2:54735891-54735910 Msa0258410:CDS 40.0%
!!! ACATTGTTTTGGCATGCAGT+TGG + chr2_2:54735936-54735955 Msa0258410:intron 40.0%
CTAAGCTGTTTACCCAAACA+GGG - chr2_2:54736036-54736055 None:intergenic 40.0%
ACTAAGCTGTTTACCCAAAC+AGG - chr2_2:54736037-54736056 None:intergenic 40.0%
CAGACAATTACGGTACTGTT+TGG - chr2_2:54736228-54736247 None:intergenic 40.0%
CCAACACACACAGACAATTA+CGG - chr2_2:54736238-54736257 None:intergenic 40.0%
CGTAATTGTCTGTGTGTGTT+GGG + chr2_2:54736236-54736255 Msa0258410:intron 40.0%
GTAATTGTCTGTGTGTGTTG+GGG + chr2_2:54736237-54736256 Msa0258410:intron 40.0%
TCGTGAATGTATTTCCGTAG+GGG + chr2_2:54736302-54736321 Msa0258410:intron 40.0%
ATACAAGCCATCACTGATGT+TGG + chr2_2:54736408-54736427 Msa0258410:intron 40.0%
CAAATCACCAACATCAGTGA+TGG - chr2_2:54736418-54736437 None:intergenic 40.0%
GTTAAACACAGGACTGATAG+GGG + chr2_2:54736487-54736506 Msa0258410:intron 40.0%
TCCACATGCAAAAGCCAATT+GGG + chr2_2:54736559-54736578 Msa0258410:intron 40.0%
TTGATATAGGCGGCAAACAA+AGG + chr2_2:54736626-54736645 Msa0258410:intron 40.0%
! CAAACAAAGGACCAAGCTTT+TGG + chr2_2:54736639-54736658 Msa0258410:intron 40.0%
CTGCAAGGACAATAATATGC+CGG + chr2_2:54736862-54736881 Msa0258410:intron 40.0%
TGCAAGGACAATAATATGCC+GGG + chr2_2:54736863-54736882 Msa0258410:intron 40.0%
TCCAACAGGGACATATTGAA+GGG - chr2_2:54737033-54737052 None:intergenic 40.0%
TTACGAAAACCTCTCCAACA+GGG - chr2_2:54737046-54737065 None:intergenic 40.0%
ATTACGAAAACCTCTCCAAC+AGG - chr2_2:54737047-54737066 None:intergenic 40.0%
!! TTTTGGGTAGTTAGCCAACT+TGG - chr2_2:54737094-54737113 None:intergenic 40.0%
!! GAAAGTGTTACACAATGCAG+TGG - chr2_2:54737292-54737311 None:intergenic 40.0%
AGATATACATACTTGGACCC+GGG - chr2_2:54737433-54737452 None:intergenic 40.0%
CAGATATACATACTTGGACC+CGG - chr2_2:54737434-54737453 None:intergenic 40.0%
AGAGAGAGAATGGCTTGATA+AGG + chr2_2:54737596-54737615 Msa0258410:CDS 40.0%
TTGAAGTCCCCTATTATGAG+AGG + chr2_2:54737655-54737674 Msa0258410:CDS 40.0%
TGAAGTCCCCTATTATGAGA+GGG + chr2_2:54737656-54737675 Msa0258410:CDS 40.0%
CCATTCATCCCTCTCATAAT+AGG - chr2_2:54737667-54737686 None:intergenic 40.0%
CCTATTATGAGAGGGATGAA+TGG + chr2_2:54737664-54737683 Msa0258410:CDS 40.0%
!! GATGAATGGGTTAAGGAGTT+TGG + chr2_2:54737678-54737697 Msa0258410:CDS 40.0%
TCTCTCTGATACGTTGTAAC+TGG + chr2_2:54737769-54737788 Msa0258410:intron 40.0%
! AAAACTGTATTTTCGTGGCC+AGG + chr2_2:54737799-54737818 Msa0258410:intron 40.0%
! AAACTGTATTTTCGTGGCCA+GGG + chr2_2:54737800-54737819 Msa0258410:intron 40.0%
!! CACGATTTGCTTTAGCTTTC+TGG + chr2_2:54738235-54738254 Msa0258410:intron 40.0%
TTACATTATCTGTGCCATGC+AGG + chr2_2:54738475-54738494 Msa0258410:intron 40.0%
TACATTATCTGTGCCATGCA+GGG + chr2_2:54738476-54738495 Msa0258410:intron 40.0%
ATGTGATGACCAAACTTCAG+CGG + chr2_2:54738538-54738557 Msa0258410:CDS 40.0%
ATGTTTGTGAACAAGCCAGA+TGG + chr2_2:54738704-54738723 Msa0258410:CDS 40.0%
TGGATCTATCAAACAGACAG+AGG - chr2_2:54738807-54738826 None:intergenic 40.0%
GTATTAAGATGTACTCCCTC+CGG + chr2_2:54738850-54738869 Msa0258410:intron 40.0%
ACATGAATCTGTACTCCATC+CGG - chr2_2:54738981-54739000 None:intergenic 40.0%
AAATGGCAAGAAGGAGATGT+CGG - chr2_2:54739024-54739043 None:intergenic 40.0%
TGGAAAAGAACACTGGTGAT+GGG - chr2_2:54739080-54739099 None:intergenic 40.0%
TTGGAAAAGAACACTGGTGA+TGG - chr2_2:54739081-54739100 None:intergenic 40.0%
! TTGATAACACTCGATATGGC+TGG + chr2_2:54739153-54739172 Msa0258410:intron 40.0%
AAAACCTGTTAGCCCTTGAT+CGG + chr2_2:54739193-54739212 Msa0258410:intron 40.0%
! TTACTCTTGGGTTTTGCCTT+TGG + chr2_2:54739286-54739305 Msa0258410:intron 40.0%
CCAATCAGGAAAAGGAAACA+TGG - chr2_2:54739712-54739731 None:intergenic 40.0%
! CCATGTTTCCTTTTCCTGAT+TGG + chr2_2:54739709-54739728 Msa0258410:intron 40.0%
! AAAACAGTATGGTGCCAATC+AGG - chr2_2:54739726-54739745 None:intergenic 40.0%
GCATGCTGTGGATCATTATA+CGG - chr2_2:54739815-54739834 None:intergenic 40.0%
TCATACAAGTAAGCATGCTG+TGG - chr2_2:54739827-54739846 None:intergenic 40.0%
CAGCATGCTTACTTGTATGA+AGG + chr2_2:54739827-54739846 Msa0258410:CDS 40.0%
TGCTTACTTGTATGAAGGAG+AGG + chr2_2:54739832-54739851 Msa0258410:CDS 40.0%
TGTTACAGGTTCCTGATTAC+TGG + chr2_2:54739972-54739991 Msa0258410:intron 40.0%
! GCGTATGTTTTCCAGTAATC+AGG - chr2_2:54739986-54740005 None:intergenic 40.0%
CTTTCTATAGATCTCCCCTT+AGG + chr2_2:54740044-54740063 Msa0258410:CDS 40.0%
TGTTATTCTCCTCTGGTCAA+GGG - chr2_2:54740537-54740556 None:intergenic 40.0%
! TTGTTATTCTCCTCTGGTCA+AGG - chr2_2:54740538-54740557 None:intergenic 40.0%
TTAAGCAGGACAAATTCAGG+AGG - chr2_2:54740562-54740581 None:intergenic 40.0%
! TTCTCACCTTTTTGCAAAGG+TGG - chr2_2:54740721-54740740 None:intergenic 40.0%
!! TTGAAAAAGTGTCCAAGCCA+TGG + chr2_2:54740842-54740861 Msa0258410:CDS 40.0%
TAGGTTATCAAACCATGGCT+TGG - chr2_2:54740857-54740876 None:intergenic 40.0%
! AAGCCATGGTTTGATAACCT+AGG + chr2_2:54740856-54740875 Msa0258410:CDS 40.0%
TTATGTTTGGAAGAGGCCAT+TGG + chr2_2:54740961-54740980 Msa0258410:CDS 40.0%
TATGTTTGGAAGAGGCCATT+GGG + chr2_2:54740962-54740981 Msa0258410:CDS 40.0%
ATTGCGTAGAAGAGAGAAAG+AGG + chr2_2:54740999-54741018 Msa0258410:CDS 40.0%
GAAAGAGGAGAAAAAGAAGG+CGG + chr2_2:54741014-54741033 Msa0258410:CDS 40.0%
TTGCCAGATGAAGATGATAC+CGG + chr2_2:54741045-54741064 Msa0258410:CDS 40.0%
! GATATTGCACCATCGAGTTT+TGG + chr2_2:54741138-54741157 Msa0258410:CDS 40.0%
TCAATAGACCCAAAACTCGA+TGG - chr2_2:54741150-54741169 None:intergenic 40.0%
ATCAAAGACAGATCAGCAGA+AGG + chr2_2:54741176-54741195 Msa0258410:CDS 40.0%
TCAAAGACAGATCAGCAGAA+GGG + chr2_2:54741177-54741196 Msa0258410:CDS 40.0%
! GTAGAAAATGGTGATTTGCC+GGG - chr2_2:54741207-54741226 None:intergenic 40.0%
GTCAACACACATACACACAA+GGG - chr2_2:54741423-54741442 None:intergenic 40.0%
AGTCAACACACATACACACA+AGG - chr2_2:54741424-54741443 None:intergenic 40.0%
ATGTTCAGCAGATGGTTAAC+AGG + chr2_2:54741576-54741595 Msa0258410:intron 40.0%
CTCAAGTGGTAACCAACTAT+TGG + chr2_2:54741754-54741773 Msa0258410:intron 40.0%
CAAGAATGGATGCCAATAGT+TGG - chr2_2:54741769-54741788 None:intergenic 40.0%
!!! TCGTTGTCATTTGGCTTTTC+AGG + chr2_2:54742097-54742116 Msa0258410:intron 40.0%
!! TTTCCATTCTGGAACAAGGT+TGG + chr2_2:54742143-54742162 Msa0258410:CDS 40.0%
AACAAGGTTGGATCAAAACC+AGG + chr2_2:54742155-54742174 Msa0258410:CDS 40.0%
ACAAGGTTGGATCAAAACCA+GGG + chr2_2:54742156-54742175 Msa0258410:CDS 40.0%
GAGTCAAGAAGTTATTCAGG+TGG + chr2_2:54742302-54742321 Msa0258410:CDS 40.0%
TCAAAAGAGCGAAGAATGAG+TGG + chr2_2:54742389-54742408 Msa0258410:CDS 40.0%
ATGTTGTCTAAATCCCTCTC+TGG - chr2_2:54742437-54742456 None:intergenic 40.0%
TGAGGTTCTCTTTGGATGTT+TGG - chr2_2:54742500-54742519 None:intergenic 40.0%
TTGGGTTTCTGATTCTGCGT+CGG - chr2_2:54734300-54734319 None:intergenic 45.0%
! GACTGGTGCTTCAGTGTTTT+GGG - chr2_2:54734363-54734382 None:intergenic 45.0%
CGACAAAAAAACTCGTCGCA+AGG + chr2_2:54734463-54734482 Msa0258410:CDS 45.0%
!! ACACCATTACTGGTACTGGT+TGG + chr2_2:54734573-54734592 Msa0258410:CDS 45.0%
!! CACCATTACTGGTACTGGTT+GGG + chr2_2:54734574-54734593 Msa0258410:CDS 45.0%
! TTTTGCTACGCCTGAGGAAT+GGG + chr2_2:54734604-54734623 Msa0258410:CDS 45.0%
ACGCACCTTAAATGTGGAGA+AGG - chr2_2:54734976-54734995 None:intergenic 45.0%
AGACTCACGCACCTTAAATG+TGG - chr2_2:54734982-54735001 None:intergenic 45.0%
! CATTTAAGGTGCGTGAGTCT+AGG + chr2_2:54734982-54735001 Msa0258410:intron 45.0%
!! CTTTCCCGCTTTAAAGTCAC+TGG + chr2_2:54735127-54735146 Msa0258410:intron 45.0%
!! GCATCCAGTGACTTTAAAGC+GGG - chr2_2:54735134-54735153 None:intergenic 45.0%
! GGCATCCAGTGACTTTAAAG+CGG - chr2_2:54735135-54735154 None:intergenic 45.0%
AAATGCTAACAAGTGCCCGA+AGG + chr2_2:54735702-54735721 Msa0258410:intron 45.0%
ACAAACCTGACAAGTCCATC+TGG - chr2_2:54735909-54735928 None:intergenic 45.0%
AATGAGATACAGGCCCTGTT+TGG + chr2_2:54736020-54736039 Msa0258410:intron 45.0%
ATGAGATACAGGCCCTGTTT+GGG + chr2_2:54736021-54736040 Msa0258410:intron 45.0%
CCGTAATTGTCTGTGTGTGT+TGG + chr2_2:54736235-54736254 Msa0258410:intron 45.0%
!! ACTGATGTTGGTGATTTGCC+TGG + chr2_2:54736420-54736439 Msa0258410:intron 45.0%
CTCCACATGCAAAAGCCAAT+TGG + chr2_2:54736558-54736577 Msa0258410:intron 45.0%
! CCAAGTAATGTGTTGGTCAG+CGG - chr2_2:54736602-54736621 None:intergenic 45.0%
CTCGTCAAAGACCAAAAGCT+TGG - chr2_2:54736653-54736672 None:intergenic 45.0%
!! CAAGCTTTTGGTCTTTGACG+AGG + chr2_2:54736651-54736670 Msa0258410:intron 45.0%
GCAAGGACAATAATATGCCG+GGG + chr2_2:54736864-54736883 Msa0258410:intron 45.0%
! TTTTGGTCGCGTAGCTTAGT+CGG - chr2_2:54736912-54736931 None:intergenic 45.0%
ACATATTGAAGGGGGAAGCA+GGG - chr2_2:54737023-54737042 None:intergenic 45.0%
CAACAGGGACATATTGAAGG+GGG - chr2_2:54737031-54737050 None:intergenic 45.0%
CCAACAGGGACATATTGAAG+GGG - chr2_2:54737032-54737051 None:intergenic 45.0%
CTCCAACAGGGACATATTGA+AGG - chr2_2:54737034-54737053 None:intergenic 45.0%
TCAATATGTCCCTGTTGGAG+AGG + chr2_2:54737034-54737053 Msa0258410:intron 45.0%
! TCATGTTTTCTGCGGCTTCA+TGG + chr2_2:54737162-54737181 Msa0258410:intron 45.0%
CAATAACACCATGACCCTCT+GGG - chr2_2:54737381-54737400 None:intergenic 45.0%
TCAATAACACCATGACCCTC+TGG - chr2_2:54737382-54737401 None:intergenic 45.0%
CCTGTTATAGAACCTGTTCC+CGG + chr2_2:54737412-54737431 Msa0258410:CDS 45.0%
CTGTTATAGAACCTGTTCCC+GGG + chr2_2:54737413-54737432 Msa0258410:CDS 45.0%
AAGAAGCAATGCGAGCTGAA+GGG + chr2_2:54737541-54737560 Msa0258410:CDS 45.0%
AAGCCATTCTCTCTCTTCTG+GGG - chr2_2:54737592-54737611 None:intergenic 45.0%
CAAGCCATTCTCTCTCTTCT+GGG - chr2_2:54737593-54737612 None:intergenic 45.0%
TCAAGCCATTCTCTCTCTTC+TGG - chr2_2:54737594-54737613 None:intergenic 45.0%
!! TGAGAGGGATGAATGGGTTA+AGG + chr2_2:54737671-54737690 Msa0258410:CDS 45.0%
AAAGGTCGCTATCGTTATGC+TGG + chr2_2:54737825-54737844 Msa0258410:CDS 45.0%
TATGCTGGTCAGATGAAGCA+TGG + chr2_2:54737840-54737859 Msa0258410:CDS 45.0%
ATGCTGGTCAGATGAAGCAT+GGG + chr2_2:54737841-54737860 Msa0258410:CDS 45.0%
! ATATCTGCTGCACCGATCAA+GGG - chr2_2:54739208-54739227 None:intergenic 45.0%
! TATATCTGCTGCACCGATCA+AGG - chr2_2:54739209-54739228 None:intergenic 45.0%
GGTGCAGCAGATATATGTTG+TGG + chr2_2:54739214-54739233 Msa0258410:intron 45.0%
ACATAGCAGAGGTAGACCAA+AGG - chr2_2:54739305-54739324 None:intergenic 45.0%
ACAACACTGCTACATAGCAG+AGG - chr2_2:54739316-54739335 None:intergenic 45.0%
!! GCAGTGTTGTTCACCCTTTT+TGG + chr2_2:54739326-54739345 Msa0258410:intron 45.0%
TTCCATGCAGTTATCCTGGA+TGG + chr2_2:54739544-54739563 Msa0258410:intron 45.0%
TGATGCATAGTTCTCCATCC+AGG - chr2_2:54739561-54739580 None:intergenic 45.0%
! GTATGGTGCCAATCAGGAAA+AGG - chr2_2:54739720-54739739 None:intergenic 45.0%
GCAGTGGTTAGAGAAAAGAG+AGG + chr2_2:54739788-54739807 Msa0258410:intron 45.0%
TGTATGAAGGAGAGGATGTG+TGG + chr2_2:54739840-54739859 Msa0258410:CDS 45.0%
ATACGCGCATGAAGTAGATC+AGG + chr2_2:54740000-54740019 Msa0258410:CDS 45.0%
AGCTGGCATAGGTATCCTAA+GGG - chr2_2:54740062-54740081 None:intergenic 45.0%
TATTCCAACTCAGCTGGCAT+AGG - chr2_2:54740073-54740092 None:intergenic 45.0%
TTGGAATACTGGTGGTCCAA+AGG + chr2_2:54740085-54740104 Msa0258410:CDS 45.0%
!! TGAGTTTTGACGGGTCTTCA+GGG - chr2_2:54740603-54740622 None:intergenic 45.0%
!! ATGAGTTTTGACGGGTCTTC+AGG - chr2_2:54740604-54740623 None:intergenic 45.0%
TAAATCCGGTTGGAGTGTGA+AGG - chr2_2:54740648-54740667 None:intergenic 45.0%
TGGCAACCACCTTTGCAAAA+AGG + chr2_2:54740712-54740731 Msa0258410:CDS 45.0%
AAGGCTATATTCCTACCCGA+TGG + chr2_2:54740754-54740773 Msa0258410:CDS 45.0%
AGTCATCATAACCATCGGGT+AGG - chr2_2:54740768-54740787 None:intergenic 45.0%
AAGCTTAAGACGCTCCCATA+CGG - chr2_2:54740818-54740837 None:intergenic 45.0%
! GTTCTTCAGCCCATTTTCCT+AGG - chr2_2:54740876-54740895 None:intergenic 45.0%
ATGTTTGGAAGAGGCCATTG+GGG + chr2_2:54740963-54740982 Msa0258410:CDS 45.0%
TAACTCTTCCATGTCCCCAA+TGG - chr2_2:54740980-54740999 None:intergenic 45.0%
GGAGAAAAAGAAGGCGGAAT+CGG + chr2_2:54741020-54741039 Msa0258410:CDS 45.0%
GAGAAAAAGAAGGCGGAATC+GGG + chr2_2:54741021-54741040 Msa0258410:CDS 45.0%
AGAAAAAGAAGGCGGAATCG+GGG + chr2_2:54741022-54741041 Msa0258410:CDS 45.0%
GAACCGGTATCATCTTCATC+TGG - chr2_2:54741051-54741070 None:intergenic 45.0%
!!! GAGTTTTGGGTCTATTGAGC+AGG + chr2_2:54741152-54741171 Msa0258410:CDS 45.0%
! TTCTAGCAGCCTTATCTCTG+CGG + chr2_2:54741245-54741264 Msa0258410:CDS 45.0%
GGTGCATTATGTTCAGCAGA+TGG + chr2_2:54741568-54741587 Msa0258410:intron 45.0%
ACCACGTAGTTGAACTCAAG+TGG + chr2_2:54741740-54741759 Msa0258410:intron 45.0%
ACCACTTGAGTTCAACTACG+TGG - chr2_2:54741744-54741763 None:intergenic 45.0%
ATGCTTGTAACACTGTGCCA+AGG + chr2_2:54741973-54741992 Msa0258410:intron 45.0%
GATCCAACCTTGTTCCAGAA+TGG - chr2_2:54742149-54742168 None:intergenic 45.0%
ATGTGATCAATGTGTTGCGC+AGG - chr2_2:54742188-54742207 None:intergenic 45.0%
ATCAGCGATGTGAAAACAGC+TGG + chr2_2:54742206-54742225 Msa0258410:CDS 45.0%
TTCAGGTGGGAGATTTCTTG+AGG + chr2_2:54742316-54742335 Msa0258410:CDS 45.0%
GAAGAATGAGTGGCAACATG+TGG + chr2_2:54742399-54742418 Msa0258410:CDS 45.0%
! AGTGAGCATAGGTTTTGCCT+CGG + chr2_2:54742583-54742602 Msa0258410:three_prime_UTR 45.0%
!!! ATAATTTATTTATTTGTTTT+TGG - chr2_2:54736929-54736948 None:intergenic 5.0%
!!! TTTTCAAATTTATAAAAAAA+GGG + chr2_2:54737971-54737990 Msa0258410:intron 5.0%
!!! GTGGTGGTGGTTTTTGGAAG+CGG - chr2_2:54734232-54734251 None:intergenic 50.0%
!!! ATCGGAGGGGTTTTTGGAGT+CGG - chr2_2:54734258-54734277 None:intergenic 50.0%
TTCGACATCGAGGTCGTCTT+GGG - chr2_2:54734318-54734337 None:intergenic 50.0%
ATTCGACATCGAGGTCGTCT+TGG - chr2_2:54734319-54734338 None:intergenic 50.0%
!! GGACTGGTGCTTCAGTGTTT+TGG - chr2_2:54734364-54734383 None:intergenic 50.0%
! TTGTTCTGGGTCGAATTCGG+AGG - chr2_2:54734390-54734409 None:intergenic 50.0%
GTCCCAACCAGTACCAGTAA+TGG - chr2_2:54734579-54734598 None:intergenic 50.0%
! CTTTTGCTACGCCTGAGGAA+TGG + chr2_2:54734603-54734622 Msa0258410:CDS 50.0%
CTTCATAAATGGCCCGACTC+TGG + chr2_2:54735281-54735300 Msa0258410:intron 50.0%
AATCGCAGCCGGCACAAAAT+AGG - chr2_2:54735776-54735795 None:intergenic 50.0%
CCAGTATTGTCAATCGCAGC+CGG - chr2_2:54735787-54735806 None:intergenic 50.0%
! CTTCTCCAGATGGACTTGTC+AGG + chr2_2:54735901-54735920 Msa0258410:CDS 50.0%
!!! GGTTTTGGTGGTAGTGGAAG+TGG + chr2_2:54735980-54735999 Msa0258410:intron 50.0%
TTGTCTGTGTGTGTTGGGGT+TGG + chr2_2:54736241-54736260 Msa0258410:intron 50.0%
!! ACCTTTTGACTACGCCCCTA+CGG - chr2_2:54736319-54736338 None:intergenic 50.0%
TTGCCTGGTTGTGTGACCAT+AGG + chr2_2:54736435-54736454 Msa0258410:intron 50.0%
TGCCTGGTTGTGTGACCATA+GGG + chr2_2:54736436-54736455 Msa0258410:intron 50.0%
!!! GCCCAATTGGCTTTTGCATG+TGG - chr2_2:54736563-54736582 None:intergenic 50.0%
GTTTGTGCATCAGGCCCAAT+TGG - chr2_2:54736576-54736595 None:intergenic 50.0%
! CAGCGGTTTGTTTGTGCATC+AGG - chr2_2:54736585-54736604 None:intergenic 50.0%
CCGCTGACCAACACATTACT+TGG + chr2_2:54736599-54736618 Msa0258410:intron 50.0%
GGACAATAATATGCCGGGGT+CGG + chr2_2:54736868-54736887 Msa0258410:intron 50.0%
GACAATAATATGCCGGGGTC+GGG + chr2_2:54736869-54736888 Msa0258410:intron 50.0%
ACAATAATATGCCGGGGTCG+GGG + chr2_2:54736870-54736889 Msa0258410:intron 50.0%
CGTAGCTTAGTCGGGAATCT+AGG - chr2_2:54736903-54736922 None:intergenic 50.0%
TTTGGTCGCGTAGCTTAGTC+GGG - chr2_2:54736911-54736930 None:intergenic 50.0%
!!! ATACATGTTTTGGTGGGGGG+TGG + chr2_2:54736985-54737004 Msa0258410:intron 50.0%
CATATTGAAGGGGGAAGCAG+GGG - chr2_2:54737022-54737041 None:intergenic 50.0%
GACATATTGAAGGGGGAAGC+AGG - chr2_2:54737024-54737043 None:intergenic 50.0%
CCCCTTCAATATGTCCCTGT+TGG + chr2_2:54737029-54737048 Msa0258410:intron 50.0%
! CGGCTTCATGGTAATGATCG+AGG + chr2_2:54737174-54737193 Msa0258410:intron 50.0%
ATGGTTTCGAAACGACCCAG+AGG + chr2_2:54737363-54737382 Msa0258410:CDS 50.0%
TGGTTTCGAAACGACCCAGA+GGG + chr2_2:54737364-54737383 Msa0258410:CDS 50.0%
CCGGGAACAGGTTCTATAAC+AGG - chr2_2:54737415-54737434 None:intergenic 50.0%
GAAGAAGCAATGCGAGCTGA+AGG + chr2_2:54737540-54737559 Msa0258410:CDS 50.0%
TGTCCCCAGAAGAGAGAGAA+TGG + chr2_2:54737586-54737605 Msa0258410:CDS 50.0%
! ATTTTCGTGGCCAGGGAGAA+AGG + chr2_2:54737807-54737826 Msa0258410:intron 50.0%
ATGAAGCATGGGAGGATGCA+TGG + chr2_2:54737852-54737871 Msa0258410:CDS 50.0%
AAAAAAGGGGGAGAGGAAGC+TGG + chr2_2:54737985-54738004 Msa0258410:intron 50.0%
TGTCAATTTCAGCTGCACGC+TGG + chr2_2:54738650-54738669 Msa0258410:intron 50.0%
TTTCAGCTGCACGCTGGTAT+AGG + chr2_2:54738656-54738675 Msa0258410:intron 50.0%
GTTCACAAACATGCGAGCCT+TGG - chr2_2:54738696-54738715 None:intergenic 50.0%
AAGAAGGAGATGTCGGAGGA+AGG - chr2_2:54739017-54739036 None:intergenic 50.0%
GTAGCAAGTCTGTCACGCTT+AGG - chr2_2:54739488-54739507 None:intergenic 50.0%
GCTGTTCCATGCAGTTATCC+TGG + chr2_2:54739540-54739559 Msa0258410:intron 50.0%
CTCCATCCAGGATAACTGCA+TGG - chr2_2:54739549-54739568 None:intergenic 50.0%
TGAAGGAGAGGATGTGTGGA+TGG + chr2_2:54739844-54739863 Msa0258410:CDS 50.0%
GCTGGCATAGGTATCCTAAG+GGG - chr2_2:54740061-54740080 None:intergenic 50.0%
CAGCTGGCATAGGTATCCTA+AGG - chr2_2:54740063-54740082 None:intergenic 50.0%
GATACCTATGCCAGCTGAGT+TGG + chr2_2:54740066-54740085 Msa0258410:CDS 50.0%
! TGCCAGCTGAGTTGGAATAC+TGG + chr2_2:54740074-54740093 Msa0258410:CDS 50.0%
CACCAGTATTCCAACTCAGC+TGG - chr2_2:54740079-54740098 None:intergenic 50.0%
! CAGCTGAGTTGGAATACTGG+TGG + chr2_2:54740077-54740096 Msa0258410:CDS 50.0%
TCTCCTCTGGTCAAGGGATT+TGG - chr2_2:54740531-54740550 None:intergenic 50.0%
!! GGAGGCTTGTTATTCTCCTC+TGG - chr2_2:54740544-54740563 None:intergenic 50.0%
GTTGGAGTGTGAAGGATGAG+AGG - chr2_2:54740640-54740659 None:intergenic 50.0%
CTCATCCTTCACACTCCAAC+CGG + chr2_2:54740640-54740659 Msa0258410:CDS 50.0%
GATCAGCAGAAGGGAAAACC+CGG + chr2_2:54741186-54741205 Msa0258410:CDS 50.0%
CACAACTCACCGCAGAGATA+AGG - chr2_2:54741257-54741276 None:intergenic 50.0%
GTCAGTTTCCCTCCTGTGAT+TGG + chr2_2:54742233-54742252 Msa0258410:CDS 50.0%
! CCTTTTGGCCAATCACAGGA+GGG - chr2_2:54742244-54742263 None:intergenic 50.0%
! CCTCCTGTGATTGGCCAAAA+GGG + chr2_2:54742242-54742261 Msa0258410:CDS 50.0%
! CTACCCTTTTGGCCAATCAC+AGG - chr2_2:54742248-54742267 None:intergenic 50.0%
! CTGTGATTGGCCAAAAGGGT+AGG + chr2_2:54742246-54742265 Msa0258410:CDS 50.0%
!! GTGGTTTTTGGAAGCGGCGA+AGG - chr2_2:54734226-54734245 None:intergenic 55.0%
!!! TTTTTGGAGTCGGAGGGTGG+TGG - chr2_2:54734248-54734267 None:intergenic 55.0%
!!! GAGGGGTTTTTGGAGTCGGA+GGG - chr2_2:54734254-54734273 None:intergenic 55.0%
! GTCGGAATCGGAGGGGTTTT+TGG - chr2_2:54734264-54734283 None:intergenic 55.0%
GGATGAGTCGGAGTCGGAAT+CGG - chr2_2:54734276-54734295 None:intergenic 55.0%
TTCTGCGTCGGAGGATGAGT+CGG - chr2_2:54734288-54734307 None:intergenic 55.0%
GGTTTCTGATTCTGCGTCGG+AGG - chr2_2:54734297-54734316 None:intergenic 55.0%
CCTCAGGCGTAGCAAAAGCA+GGG - chr2_2:54734601-54734620 None:intergenic 55.0%
TCCTCAGGCGTAGCAAAAGC+AGG - chr2_2:54734602-54734621 None:intergenic 55.0%
CCGGCTGCGATTGACAATAC+TGG + chr2_2:54735784-54735803 Msa0258410:intron 55.0%
TCTGTGTGTGTTGGGGTTGG+AGG + chr2_2:54736244-54736263 Msa0258410:intron 55.0%
CTGTGTGTGTTGGGGTTGGA+GGG + chr2_2:54736245-54736264 Msa0258410:intron 55.0%
TGTGTGTGTTGGGGTTGGAG+GGG + chr2_2:54736246-54736265 Msa0258410:intron 55.0%
! TGGGGTTGGAGGGGACTTTT+AGG + chr2_2:54736255-54736274 Msa0258410:intron 55.0%
! TCCGTAGGGGCGTAGTCAAA+AGG + chr2_2:54736315-54736334 Msa0258410:intron 55.0%
GCCTGGTTGTGTGACCATAG+GGG + chr2_2:54736437-54736456 Msa0258410:intron 55.0%
TCCCCTATGGTCACACAACC+AGG - chr2_2:54736441-54736460 None:intergenic 55.0%
TGTCTCAGTTGGGAGCTGCA+AGG + chr2_2:54736847-54736866 Msa0258410:intron 55.0%
ACATACTTGGACCCGGGAAC+AGG - chr2_2:54737427-54737446 None:intergenic 55.0%
ACGATAGCGACCTTTCTCCC+TGG - chr2_2:54737820-54737839 None:intergenic 55.0%
CTGGTCAGATGAAGCATGGG+AGG + chr2_2:54737844-54737863 Msa0258410:CDS 55.0%
CATGGGAGGATGCATGGATG+TGG + chr2_2:54737858-54737877 Msa0258410:CDS 55.0%
AGGTGAAGTTGCTGCTGCCA+AGG + chr2_2:54738676-54738695 Msa0258410:CDS 55.0%
TGGCAAGAAGGAGATGTCGG+AGG - chr2_2:54739021-54739040 None:intergenic 55.0%
! TGCACCGATCAAGGGCTAAC+AGG - chr2_2:54739200-54739219 None:intergenic 55.0%
CCTCTGGTCAAGGGATTTGG+AGG - chr2_2:54740528-54740547 None:intergenic 55.0%
CCTCCAAATCCCTTGACCAG+AGG + chr2_2:54740525-54740544 Msa0258410:intron 55.0%
GCTCGGGTTCCTTGTTAAGC+AGG - chr2_2:54740576-54740595 None:intergenic 55.0%
! TTTGACGGGTCTTCAGGGTC+AGG - chr2_2:54740598-54740617 None:intergenic 55.0%
TGTTGCGCAGGAACTAACCC+TGG - chr2_2:54742176-54742195 None:intergenic 55.0%
! CCCTCCTGTGATTGGCCAAA+AGG + chr2_2:54742241-54742260 Msa0258410:CDS 55.0%
! CCCTTTTGGCCAATCACAGG+AGG - chr2_2:54742245-54742264 None:intergenic 55.0%
! CGGCTTTCAGCCTACCCTTT+TGG - chr2_2:54742259-54742278 None:intergenic 55.0%
AAGGGTAGGCTGAAAGCCGT+CGG + chr2_2:54742260-54742279 Msa0258410:CDS 55.0%
! CGGTCGAGTCTGAGACATAG+AGG - chr2_2:54742345-54742364 None:intergenic 55.0%
TGGCAACATGTGGCTGCATG+CGG + chr2_2:54742409-54742428 Msa0258410:CDS 55.0%
TCCTTCGTGTCTCTATGCCG+AGG - chr2_2:54742603-54742622 None:intergenic 55.0%
!!! CGGAGGGTGGTGGTGGTTTT+TGG - chr2_2:54734238-54734257 None:intergenic 60.0%
!!! GGGTTTTTGGAGTCGGAGGG+TGG - chr2_2:54734251-54734270 None:intergenic 60.0%
!!! GGAGGGGTTTTTGGAGTCGG+AGG - chr2_2:54734255-54734274 None:intergenic 60.0%
AGTCGGAGTCGGAATCGGAG+GGG - chr2_2:54734271-54734290 None:intergenic 60.0%
GAGTCGGAGTCGGAATCGGA+GGG - chr2_2:54734272-54734291 None:intergenic 60.0%
TGAGTCGGAGTCGGAATCGG+AGG - chr2_2:54734273-54734292 None:intergenic 60.0%
GTCGGAGGATGAGTCGGAGT+CGG - chr2_2:54734282-54734301 None:intergenic 60.0%
TCGAATTCGGAGGCTGGGAC+TGG - chr2_2:54734380-54734399 None:intergenic 60.0%
CTGGGTCGAATTCGGAGGCT+GGG - chr2_2:54734385-54734404 None:intergenic 60.0%
TCTGGGTCGAATTCGGAGGC+TGG - chr2_2:54734386-54734405 None:intergenic 60.0%
!! CCCTGCTTTTGCTACGCCTG+AGG + chr2_2:54734598-54734617 Msa0258410:CDS 60.0%
CCTACGGTAGCAGTCCCCTA+TGG - chr2_2:54736454-54736473 None:intergenic 60.0%
CCATAGGGGACTGCTACCGT+AGG + chr2_2:54736451-54736470 Msa0258410:intron 60.0%
CACAGGACTGATAGGGGAGC+TGG + chr2_2:54736493-54736512 Msa0258410:intron 60.0%
TAGGTTTCGAACCCCGACCC+CGG - chr2_2:54736884-54736903 None:intergenic 60.0%
!!! ATGTTTTGGTGGGGGGTGGC+TGG + chr2_2:54736989-54737008 Msa0258410:intron 60.0%
!!! TGTTTTGGTGGGGGGTGGCT+GGG + chr2_2:54736990-54737009 Msa0258410:intron 60.0%
CGAAACGACCCAGAGGGTCA+TGG + chr2_2:54737370-54737389 Msa0258410:CDS 60.0%
GAGGATGTGTGGATGGCACC+TGG + chr2_2:54739851-54739870 Msa0258410:CDS 60.0%
GGAAGAGGCCATTGGGGACA+TGG + chr2_2:54740969-54740988 Msa0258410:CDS 60.0%
GCCTCGGCATAGAGACACGA+AGG + chr2_2:54742599-54742618 Msa0258410:three_prime_UTR 60.0%
! TTGGAGTCGGAGGGTGGTGG+TGG - chr2_2:54734245-54734264 None:intergenic 65.0%
GGGTCTTCAGGGTCAGGCTC+GGG - chr2_2:54740592-54740611 None:intergenic 65.0%
CGGGTCTTCAGGGTCAGGCT+CGG - chr2_2:54740593-54740612 None:intergenic 65.0%
GCTGCATGCGGCACCAGAGA+GGG + chr2_2:54742421-54742440 Msa0258410:CDS 65.0%
TTGGTGGGGGGTGGCTGGGT+TGG + chr2_2:54736994-54737013 Msa0258410:intron 70.0%
GGCTGCATGCGGCACCAGAG+AGG + chr2_2:54742420-54742439 Msa0258410:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 54734081 54742778 54734081 ID=Msa0258410;Name=Msa0258410
chr2_2 mRNA 54734081 54742778 54734081 ID=Msa0258410-mRNA-1;Parent=Msa0258410;Name=Msa0258410-mRNA-1;_AED=0.14;_eAED=0.14;_QI=134|0.9|0.90|1|1|1|11|240|834
chr2_2 exon 54734081 54734819 54734081 ID=Msa0258410-mRNA-1:exon:16471;Parent=Msa0258410-mRNA-1
chr2_2 exon 54735851 54735922 54735851 ID=Msa0258410-mRNA-1:exon:16472;Parent=Msa0258410-mRNA-1
chr2_2 exon 54737351 54737440 54737351 ID=Msa0258410-mRNA-1:exon:16473;Parent=Msa0258410-mRNA-1
chr2_2 exon 54737536 54737709 54737536 ID=Msa0258410-mRNA-1:exon:16474;Parent=Msa0258410-mRNA-1
chr2_2 exon 54737821 54737881 54737821 ID=Msa0258410-mRNA-1:exon:16475;Parent=Msa0258410-mRNA-1
chr2_2 exon 54738497 54738559 54738497 ID=Msa0258410-mRNA-1:exon:16476;Parent=Msa0258410-mRNA-1
chr2_2 exon 54738662 54738728 54738662 ID=Msa0258410-mRNA-1:exon:16477;Parent=Msa0258410-mRNA-1
chr2_2 exon 54739792 54739895 54739792 ID=Msa0258410-mRNA-1:exon:16478;Parent=Msa0258410-mRNA-1
chr2_2 exon 54739980 54740106 54739980 ID=Msa0258410-mRNA-1:exon:16479;Parent=Msa0258410-mRNA-1
chr2_2 exon 54740545 54741266 54740545 ID=Msa0258410-mRNA-1:exon:16480;Parent=Msa0258410-mRNA-1
chr2_2 exon 54742119 54742778 54742119 ID=Msa0258410-mRNA-1:exon:16481;Parent=Msa0258410-mRNA-1
chr2_2 five_prime_UTR 54734081 54734214 54734081 ID=Msa0258410-mRNA-1:five_prime_utr;Parent=Msa0258410-mRNA-1
chr2_2 CDS 54734215 54734819 54734215 ID=Msa0258410-mRNA-1:cds;Parent=Msa0258410-mRNA-1
chr2_2 CDS 54735851 54735922 54735851 ID=Msa0258410-mRNA-1:cds;Parent=Msa0258410-mRNA-1
chr2_2 CDS 54737351 54737440 54737351 ID=Msa0258410-mRNA-1:cds;Parent=Msa0258410-mRNA-1
chr2_2 CDS 54737536 54737709 54737536 ID=Msa0258410-mRNA-1:cds;Parent=Msa0258410-mRNA-1
chr2_2 CDS 54737821 54737881 54737821 ID=Msa0258410-mRNA-1:cds;Parent=Msa0258410-mRNA-1
chr2_2 CDS 54738497 54738559 54738497 ID=Msa0258410-mRNA-1:cds;Parent=Msa0258410-mRNA-1
chr2_2 CDS 54738662 54738728 54738662 ID=Msa0258410-mRNA-1:cds;Parent=Msa0258410-mRNA-1
chr2_2 CDS 54739792 54739895 54739792 ID=Msa0258410-mRNA-1:cds;Parent=Msa0258410-mRNA-1
chr2_2 CDS 54739980 54740106 54739980 ID=Msa0258410-mRNA-1:cds;Parent=Msa0258410-mRNA-1
chr2_2 CDS 54740545 54741266 54740545 ID=Msa0258410-mRNA-1:cds;Parent=Msa0258410-mRNA-1
chr2_2 CDS 54742119 54742538 54742119 ID=Msa0258410-mRNA-1:cds;Parent=Msa0258410-mRNA-1
chr2_2 three_prime_UTR 54742539 54742778 54742539 ID=Msa0258410-mRNA-1:three_prime_utr;Parent=Msa0258410-mRNA-1
Gene Sequence

>Msa0258410

ATGTTTCTCCTTCGCCGCTTCCAAAAACCACCACCACCCTCCGACTCCAAAAACCCCTCCGATTCCGACTCCGACTCATCCTCCGACGCAGAATCAGAAACCCAAGACGACCTCGATGTCGAATCTTATCTCAACTCATTCATCGCCCAAAACACTGAAGCACCAGTCCCAGCCTCCGAATTCGACCCAGAACAAAACTTCAAAGACGTAATCGAAGCTTATCATTCCGAAAAAGTTCAAAAATACTACGACAAAAAAACTCGTCGCAAGGTTAAACATCGTAACCCGTTTGATTTTCCACCTGATGATGAGAATTGGAAAGAAGAAGATTTGAGAGAGCTTTGGGATAATGGGAATAACACCATTACTGGTACTGGTTGGGACCCTGCTTTTGCTACGCCTGAGGAATGGGAATATGTGAAGTGGAAGCATTATAAGGGACAAGATGTTCCTATTGCTCCTTTTTATCTTCCTTATAGGAAACCTATTCCTCCTGTACCTACTAATCATTCTGCTATTAAAGGTCCTAAAGATGTTATTGAAGAATTGGATAGGATTGAAGAGTTTCTCAAATGGGTTAGCTATGTTTTTGAAGATGGTAGCACATATGAAGGAACTCTTTGGGATGATATTGCTCAAGGAAAAGGTGTTTATACTTCTCCAGATGGACTTGTCAGGTATGAAGGTGAATGGTTTCGAAACGACCCAGAGGGTCATGGTGTTATTGAAGTTGAAGTACCTGTTATAGAACCTGTTCCCGGGTCCAAACTTGAAGAAGCAATGCGAGCTGAAGGGAAGATAATAAAAAGGGATTTTATGTCCCCAGAAGAGAGAGAATGGCTTGATAAGGATATTGAAGATAGTTATCTTCTTGCAAATGGCAACTTTGAAGTCCCCTATTATGAGAGGGATGAATGGGTTAAGGAGTTTGGAGAAAAGCCGGAGAAAGGTCGCTATCGTTATGCTGGTCAGATGAAGCATGGGAGGATGCATGGATGTGGTGGTAGATTTTATTTTGGAGAAATATTGGATGATGATGAGGGATGTGATGACCAAACTTCAGCGCTGCACGCTGGTATAGGTGAAGTTGCTGCTGCCAAGGCTCGCATGTTTGTGAACAAGCCAGATGGAATGGTTAGAGAAAAGAGAGGTCCGTATAATGATCCACAGCATGCTTACTTGTATGAAGGAGAGGATGTGTGGATGGCACCTGGCTTCATTAACCAATTTTATGAAGTTCCTGATTACTGGAAAACATACGCGCATGAAGTAGATCAGGAAAGAGAAATGTGGTTGAACTCTTTCTATAGATCTCCCCTTAGGATACCTATGCCAGCTGAGTTGGAATACTGGTGGTCCAAAGAGGAGAATAACAAGCCTCCTGAATTTGTCCTGCTTAACAAGGAACCCGAGCCTGACCCTGAAGACCCGTCAAAACTCATATATACTGAGGATCCTCTCATCCTTCACACTCCAACCGGATTTATCATCAATTATGTCGAGGATGAGAAATATGGAATACGTATGTTCTGGCAACCACCTTTGCAAAAAGGTGAGAAAGTTGACCCTAAAAAGGCTATATTCCTACCCGATGGTTATGATGACTTTTTTGGGATAGATAAGAACAAAAAGACCGTATGGGAGCGTCTTAAGCTTGCAATTGAAAAAGTGTCCAAGCCATGGTTTGATAACCTAGGAAAATGGGCTGAAGAACAGAAGAAAATTAGTGAAATGAAAAAGGAGGCACTTGAGAAAGAACTTGAACTGATAGAAGCTGAATTATGTTTGGAAGAGGCCATTGGGGACATGGAAGAGTTATTGCGTAGAAGAGAGAAAGAGGAGAAAAAGAAGGCGGAATCGGGGTTGCCAGATGAAGATGATACCGGTTCTGTAGTCAAACAAGATGAAAAAGCCCGTGTAGATGAAGAAGATGAAGATGATGAGGAAGACGAAGATGATATTGCACCATCGAGTTTTGGGTCTATTGAGCAGGAATCAAAGACAGATCAGCAGAAGGGAAAACCCGGCAAATCACCATTTTCTACAACTTCACTAGCATTTACTTCTAGCAGCCTTATCTCTGCGGTTCCATCAAAGCTGCAACAATCATTTCCATTCTGGAACAAGGTTGGATCAAAACCAGGGTTAGTTCCTGCGCAACACATTGATCACATCAGCGATGTGAAAACAGCTGGTTCAGTCAGTTTCCCTCCTGTGATTGGCCAAAAGGGTAGGCTGAAAGCCGTCGGTAAAGCACATGAAAAAGTTGAGTCAAGAAGTTATTCAGGTGGGAGATTTCTTGAGGCATCCTCTATGTCTCAGACTCGACCGTGTTATACGACTTCAAAAAGTAACTCAAAAGAGCGAAGAATGAGTGGCAACATGTGGCTGCATGCGGCACCAGAGAGGGATTTAGACAACATACTCTCTCTGCATTCAGCTTCATCAATGTACAATTTTTATCCAAACATCCAAAGAGAACCTCACTTCAAATTTAAGCTTTGA
Protein sequence

>Msa0258410

MFLLRRFQKPPPPSDSKNPSDSDSDSSSDAESETQDDLDVESYLNSFIAQNTEAPVPASEFDPEQNFKDVIEAYHSEKVQKYYDKKTRRKVKHRNPFDFPPDDENWKEEDLRELWDNGNNTITGTGWDPAFATPEEWEYVKWKHYKGQDVPIAPFYLPYRKPIPPVPTNHSAIKGPKDVIEELDRIEEFLKWVSYVFEDGSTYEGTLWDDIAQGKGVYTSPDGLVRYEGEWFRNDPEGHGVIEVEVPVIEPVPGSKLEEAMRAEGKIIKRDFMSPEEREWLDKDIEDSYLLANGNFEVPYYERDEWVKEFGEKPEKGRYRYAGQMKHGRMHGCGGRFYFGEILDDDEGCDDQTSALHAGIGEVAAAKARMFVNKPDGMVREKRGPYNDPQHAYLYEGEDVWMAPGFINQFYEVPDYWKTYAHEVDQEREMWLNSFYRSPLRIPMPAELEYWWSKEENNKPPEFVLLNKEPEPDPEDPSKLIYTEDPLILHTPTGFIINYVEDEKYGIRMFWQPPLQKGEKVDPKKAIFLPDGYDDFFGIDKNKKTVWERLKLAIEKVSKPWFDNLGKWAEEQKKISEMKKEALEKELELIEAELCLEEAIGDMEELLRRREKEEKKKAESGLPDEDDTGSVVKQDEKARVDEEDEDDEEDEDDIAPSSFGSIEQESKTDQQKGKPGKSPFSTTSLAFTSSSLISAVPSKLQQSFPFWNKVGSKPGLVPAQHIDHISDVKTAGSVSFPPVIGQKGRLKAVGKAHEKVESRSYSGGRFLEASSMSQTRPCYTTSKSNSKERRMSGNMWLHAAPERDLDNILSLHSASSMYNFYPNIQREPHFKFKL*