AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0183170


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0183170 MtrunA17_Chr1g0211501 87.147 389 20 3 1 364 14 397 0.0 683
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0183170 AT2G17033.4 43.048 374 173 6 20 363 40 403 1.20e-98 301
Msa0183170 AT2G17033.3 44.693 358 160 5 36 363 85 434 1.64e-98 302
Msa0183170 AT2G17033.1 44.693 358 160 5 36 363 88 437 2.22e-98 302
Msa0183170 AT2G17033.2 43.048 374 173 6 20 363 75 438 2.57e-98 301

Find 109 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACCTGGGTTCAGCTTATT+TGG 0.208986 1_4:-72000465 Msa0183170:CDS
GATAATATAAAGTAGAATTA+AGG 0.216659 1_4:-71999988 Msa0183170:three_prime_UTR
AATATGATTCTTTCAAGTTT+TGG 0.242120 1_4:-72000773 Msa0183170:CDS
GGATTCTAAAGAGGTGAAAT+TGG 0.277238 1_4:-72000501 Msa0183170:CDS
AATTAATGTTCTTACTTGTT+TGG 0.282850 1_4:+72000011 None:intergenic
AGTGGAGAGTAGTACGGATT+TGG 0.307534 1_4:+72001452 None:intergenic
TGAAGTAGCTTCGGAAATTA+AGG 0.315472 1_4:+72001183 None:intergenic
CTTACAAGGATGAGGAATTC+TGG 0.337094 1_4:-72000716 Msa0183170:CDS
TGTTGTGGATTTGAATGATT+TGG 0.343073 1_4:-72000630 Msa0183170:CDS
AAGGTAAGGCTGTCAAAATT+TGG 0.346114 1_4:-72000233 Msa0183170:three_prime_UTR
GTTGATGAAATGGAGAATAA+TGG 0.350749 1_4:-72000821 Msa0183170:CDS
GCCGGTTTGAGAAGCGCGTT+TGG 0.359029 1_4:+72001099 None:intergenic
CTTATTTGGTTATGTTGCTT+TGG 0.360164 1_4:-72000451 Msa0183170:CDS
TTACTTGTTTGGCATTTCCT+TGG 0.361069 1_4:+72000022 None:intergenic
AGTATGTGGAAATGGTTTCT+TGG 0.378531 1_4:-72000739 Msa0183170:CDS
GGAAATTAAGGTCTGGGATT+CGG 0.380524 1_4:+72001195 None:intergenic
TTTGTATGGATATGGAAGAT+TGG 0.382413 1_4:-72000870 Msa0183170:CDS
GCCTCGTGAGGCTGAGAATC+TGG 0.382565 1_4:-72000966 Msa0183170:CDS
CGGTGTAGCGTTTGTGTTTG+TGG 0.383943 1_4:+72001215 None:intergenic
TTGATGAAATGGAGAATAAT+GGG 0.391709 1_4:-72000820 Msa0183170:CDS
TGATTTCATTGTATTATGAA+TGG 0.392007 1_4:-72000189 Msa0183170:three_prime_UTR
GTGGAGAGTAGTACGGATTT+GGG 0.400880 1_4:+72001453 None:intergenic
ATGGGAAGCTACGGTGGTTA+AGG 0.401506 1_4:-72000567 Msa0183170:CDS
ATAATATAAAGTAGAATTAA+GGG 0.402297 1_4:-71999987 Msa0183170:three_prime_UTR
TTGTATGGATATGGAAGATT+GGG 0.404726 1_4:-72000869 Msa0183170:CDS
GAACAGAGTTGTTGATGAAA+TGG 0.410686 1_4:-72000831 Msa0183170:CDS
TTTGGTTATGTTGCTTTGGT+TGG 0.411930 1_4:-72000447 Msa0183170:CDS
TGAGGCTGAGAATCTGGTTC+GGG 0.416550 1_4:-72000960 Msa0183170:CDS
AGCGTTTGTGTTTGTGGAGT+AGG 0.421612 1_4:+72001221 None:intergenic
TCACGAGGAGTATGTGGAAA+TGG 0.423732 1_4:-72000747 Msa0183170:CDS
AGCTTCGGAAATTAAGGTCT+GGG 0.429865 1_4:+72001189 None:intergenic
GCGTTTGTGTTTGTGGAGTA+GGG 0.442569 1_4:+72001222 None:intergenic
GAATTTACGAATGAGATATT+CGG 0.445371 1_4:+72001488 None:intergenic
TCTCTTCTATGCAAAACTCT+TGG 0.446048 1_4:-72001131 Msa0183170:CDS
ACGAATGAGATATTCGGTAT+TGG 0.449599 1_4:+72001494 None:intergenic
GTGAGGCTGAGAATCTGGTT+CGG 0.450440 1_4:-72000961 Msa0183170:CDS
GGTTATGTTGCTTTGGTTGG+AGG 0.453621 1_4:-72000444 Msa0183170:CDS
TAGCTTCGGAAATTAAGGTC+TGG 0.456742 1_4:+72001188 None:intergenic
CTGCTTTGTTGCCAAAGGTA+AGG 0.456812 1_4:-72000247 Msa0183170:three_prime_UTR
TGGGTTTGGAGTTGAGGAGG+AGG 0.457009 1_4:+72001606 None:intergenic
CTGAAATCACTGTGGTCTGT+GGG 0.457071 1_4:-72000377 Msa0183170:CDS
TCCAAACGCGCTTCTCAAAC+CGG 0.458542 1_4:-72001100 Msa0183170:CDS
CAACATTCCTCATTATCGTT+GGG 0.462227 1_4:+72000648 None:intergenic
GTGGAGTAGGGTGATTAAAT+CGG 0.462337 1_4:+72001234 None:intergenic
AAAGTTGAAAACAGCAGTAA+AGG 0.462420 1_4:+72000062 None:intergenic
AAAGTCCACTCAGGATTGAT+AGG 0.466016 1_4:-72000281 Msa0183170:three_prime_UTR
CGAAGCTGGGTTTGGAGTTG+AGG 0.468448 1_4:+72001600 None:intergenic
ATATTCGGTATTGGTGTTTG+TGG 0.469888 1_4:+72001503 None:intergenic
TTAAATCGGCGATGATGGTT+GGG 0.470625 1_4:+72001248 None:intergenic
ATCACTGTGGTCTGTGGGGT+TGG 0.474623 1_4:-72000372 Msa0183170:CDS
GGTGATTAAATCGGCGATGA+TGG 0.475107 1_4:+72001243 None:intergenic
GAGTAGTACGGATTTGGGTG+AGG 0.475242 1_4:+72001458 None:intergenic
TCTTTAAGCAATACTTTGAC+CGG 0.476216 1_4:+72000321 None:intergenic
GCTTATGAATCCATGGTTAG+TGG 0.476513 1_4:-72001007 Msa0183170:CDS
TATCAAATGTTGCTTATCCA+AGG 0.489337 1_4:-72000039 Msa0183170:three_prime_UTR
ATTAAATCGGCGATGATGGT+TGG 0.492033 1_4:+72001247 None:intergenic
AAATGGTTTCTTGGCTTACA+AGG 0.492833 1_4:-72000730 Msa0183170:CDS
AGAGTTGTTGAATGTGTGTA+TGG 0.492964 1_4:-72000594 Msa0183170:CDS
TTGAAGAGGAAGTGTGAAGA+AGG 0.494562 1_4:+72001047 None:intergenic
CGTTGGGCAAGAATTTGAAA+CGG 0.501944 1_4:+72000664 None:intergenic
TTATAAGTTCTAACAGAAAA+CGG 0.505009 1_4:+72000689 None:intergenic
AAATTTGGTTATGTGAATTG+AGG 0.506066 1_4:-72000218 Msa0183170:three_prime_UTR
ACAACATTCCTCATTATCGT+TGG 0.508259 1_4:+72000647 None:intergenic
GGATTTGCATGGATTTCACC+TGG 0.508564 1_4:-72000480 Msa0183170:CDS
TGGAATTCACGAGGAGTATG+TGG 0.512841 1_4:-72000753 Msa0183170:CDS
TTTCTTGGCTTACAAGGATG+AGG 0.513035 1_4:-72000724 Msa0183170:CDS
TGAATGTGTGTATGGAAGGA+TGG 0.520905 1_4:-72000586 Msa0183170:CDS
CGTTGCACTCTAACGAAACA+AGG 0.530147 1_4:-72001552 Msa0183170:CDS
TTTAAACAAACAGATGGTGG+TGG 0.536003 1_4:-72000935 Msa0183170:CDS
GCTGAAATCACTGTGGTCTG+TGG 0.537614 1_4:-72000378 Msa0183170:CDS
TTTCGATGAGGTGATGGTGT+GGG 0.539150 1_4:-72000522 Msa0183170:CDS
ATTCTTGCCCAACGATAATG+AGG 0.542535 1_4:-72000655 Msa0183170:CDS
GAGGTGAAATTGGATTTGCA+TGG 0.550734 1_4:-72000491 Msa0183170:CDS
CGGGAATTTAAACAAACAGA+TGG 0.561502 1_4:-72000941 Msa0183170:CDS
GCGTTTGACGTAAATTGAAG+AGG 0.567328 1_4:+72001033 None:intergenic
TTGTTGAATGTGTGTATGGA+AGG 0.568777 1_4:-72000590 Msa0183170:CDS
GATTTGCATGGATTTCACCT+GGG 0.577909 1_4:-72000479 Msa0183170:CDS
AGCTGGGTTTGGAGTTGAGG+AGG 0.580179 1_4:+72001603 None:intergenic
ACGCAGAGCTTATGAATCCA+TGG 0.582181 1_4:-72001014 Msa0183170:CDS
CAGACCACAGTGATTTCAGC+AGG 0.584643 1_4:+72000381 None:intergenic
AACGATAATGAGGAATGTTG+TGG 0.586263 1_4:-72000645 Msa0183170:CDS
GGTTGGAGGAGATGCAGAAG+AGG 0.586274 1_4:-72000430 Msa0183170:CDS
ATATAGCAGCAAAATTGCAT+TGG 0.592055 1_4:+72000161 None:intergenic
TGCACACAATCCACTAACCA+TGG 0.593701 1_4:+72000997 None:intergenic
ACTGGCTGCTTTGTTGCCAA+AGG 0.597676 1_4:-72000252 Msa0183170:three_prime_UTR
TTAAACAAACAGATGGTGGT+GGG 0.600043 1_4:-72000934 Msa0183170:CDS
GACTTGAATTCAAAAGCAGA+AGG 0.600743 1_4:+72000896 None:intergenic
AGAATAAGCGAAATCAAAGC+CGG 0.605755 1_4:+72001081 None:intergenic
AAGTGTGAAGAAGGTTGTTG+AGG 0.610689 1_4:+72001056 None:intergenic
GAATGTGTGTATGGAAGGAT+GGG 0.610715 1_4:-72000585 Msa0183170:CDS
GCGAATCACAATGGTACACA+TGG 0.610730 1_4:-72001273 Msa0183170:CDS
CAATGTGAGAGGAGAATCGC+CGG 0.620006 1_4:-72000340 Msa0183170:exon
GAATTTAAACAAACAGATGG+TGG 0.622742 1_4:-72000938 Msa0183170:CDS
TTTCGTTAGAGTGCAACGAA+TGG 0.625820 1_4:+72001557 None:intergenic
TGAAGATGAAAAGTCCACTC+AGG 0.630228 1_4:-72000290 Msa0183170:three_prime_UTR
ACCAGATTCTCAGCCTCACG+AGG 0.633510 1_4:+72000965 None:intergenic
TATGGAAGGATGGGAAGCTA+CGG 0.639377 1_4:-72000576 Msa0183170:CDS
GATGGTGTGGGATTCTAAAG+AGG 0.643782 1_4:-72000510 Msa0183170:CDS
GGTTAGTGGATTGTGTGCAA+TGG 0.645853 1_4:-72000993 Msa0183170:CDS
TGAAATCACTGTGGTCTGTG+GGG 0.648087 1_4:-72000376 Msa0183170:CDS
GGAAGGATGGGAAGCTACGG+TGG 0.648287 1_4:-72000573 Msa0183170:CDS
TAAGAATAAGCGAATCACAA+TGG 0.660243 1_4:-72001282 Msa0183170:CDS
TTCTTCCTATCAATCCTGAG+TGG 0.663898 1_4:+72000276 None:intergenic
GGAAAGCATAGCAATGTGAG+AGG 0.667903 1_4:-72000351 Msa0183170:exon
AGGATTGATAGGAAGAACAC+TGG 0.687654 1_4:-72000270 Msa0183170:three_prime_UTR
TGCAATGGATAAGCCTCGTG+AGG 0.694549 1_4:-72000978 Msa0183170:CDS
TAACCAAATAAGCTGAACCC+AGG 0.706791 1_4:+72000462 None:intergenic
GTTGCACTCTAACGAAACAA+GGG 0.711347 1_4:-72001551 Msa0183170:CDS
GATTCCTGCTGAAATCACTG+TGG 0.811897 1_4:-72000385 Msa0183170:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATATAAAGTAGAATTAA+GGG - chr1_4:72001612-72001631 Msa0183170:CDS 10.0%
!! ATAATATAAAGTAGAATTAA+GGG - chr1_4:72001612-72001631 Msa0183170:CDS 10.0%
!! GATAATATAAAGTAGAATTA+AGG - chr1_4:72001611-72001630 Msa0183170:CDS 15.0%
!! GATAATATAAAGTAGAATTA+AGG - chr1_4:72001611-72001630 Msa0183170:CDS 15.0%
!!! AATATGATTCTTTCAAGTTT+TGG - chr1_4:72000826-72000845 Msa0183170:CDS 20.0%
!!! TTATAAGTTCTAACAGAAAA+CGG + chr1_4:72000913-72000932 None:intergenic 20.0%
!! TGATTTCATTGTATTATGAA+TGG - chr1_4:72001410-72001429 Msa0183170:intron 20.0%
!! AATTAATGTTCTTACTTGTT+TGG + chr1_4:72001591-72001610 None:intergenic 20.0%
!!! AATATGATTCTTTCAAGTTT+TGG - chr1_4:72000826-72000845 Msa0183170:CDS 20.0%
!!! TTATAAGTTCTAACAGAAAA+CGG + chr1_4:72000913-72000932 None:intergenic 20.0%
!! TGATTTCATTGTATTATGAA+TGG - chr1_4:72001410-72001429 Msa0183170:intron 20.0%
!! AATTAATGTTCTTACTTGTT+TGG + chr1_4:72001591-72001610 None:intergenic 20.0%
! GAATTTACGAATGAGATATT+CGG + chr1_4:72000114-72000133 None:intergenic 25.0%
!! GAATTCAAGTCTATTTTGTA+TGG - chr1_4:72000715-72000734 Msa0183170:CDS 25.0%
!! AAGTCTATTTTGTATGGATA+TGG - chr1_4:72000721-72000740 Msa0183170:CDS 25.0%
! TTGATGAAATGGAGAATAAT+GGG - chr1_4:72000779-72000798 Msa0183170:CDS 25.0%
! AAATTTGGTTATGTGAATTG+AGG - chr1_4:72001381-72001400 Msa0183170:intron 25.0%
! GAATTTACGAATGAGATATT+CGG + chr1_4:72000114-72000133 None:intergenic 25.0%
!! GAATTCAAGTCTATTTTGTA+TGG - chr1_4:72000715-72000734 Msa0183170:CDS 25.0%
!! AAGTCTATTTTGTATGGATA+TGG - chr1_4:72000721-72000740 Msa0183170:CDS 25.0%
! TTGATGAAATGGAGAATAAT+GGG - chr1_4:72000779-72000798 Msa0183170:CDS 25.0%
! AAATTTGGTTATGTGAATTG+AGG - chr1_4:72001381-72001400 Msa0183170:intron 25.0%
!!! GTTTTTTTTAAGACGAAGCT+GGG + chr1_4:72000015-72000034 None:intergenic 30.0%
!!! TGTTTTTTTTAAGACGAAGC+TGG + chr1_4:72000016-72000035 None:intergenic 30.0%
AAATGAGATGAGGGTAATTT+GGG + chr1_4:72000252-72000271 None:intergenic 30.0%
GAGATTATGAAATGAGATGA+GGG + chr1_4:72000261-72000280 None:intergenic 30.0%
TAAGAATAAGCGAATCACAA+TGG - chr1_4:72000317-72000336 Msa0183170:three_prime_UTR 30.0%
GAATTTAAACAAACAGATGG+TGG - chr1_4:72000661-72000680 Msa0183170:CDS 30.0%
TTTGTATGGATATGGAAGAT+TGG - chr1_4:72000729-72000748 Msa0183170:CDS 30.0%
TTGTATGGATATGGAAGATT+GGG - chr1_4:72000730-72000749 Msa0183170:CDS 30.0%
! GTTGATGAAATGGAGAATAA+TGG - chr1_4:72000778-72000797 Msa0183170:CDS 30.0%
TGTTGTGGATTTGAATGATT+TGG - chr1_4:72000969-72000988 Msa0183170:CDS 30.0%
! CTTATTTGGTTATGTTGCTT+TGG - chr1_4:72001148-72001167 Msa0183170:CDS 30.0%
TCTTTAAGCAATACTTTGAC+CGG + chr1_4:72001281-72001300 None:intergenic 30.0%
ATATAGCAGCAAAATTGCAT+TGG + chr1_4:72001441-72001460 None:intergenic 30.0%
AAAGTTGAAAACAGCAGTAA+AGG + chr1_4:72001540-72001559 None:intergenic 30.0%
! TATCAAATGTTGCTTATCCA+AGG - chr1_4:72001560-72001579 Msa0183170:CDS 30.0%
!!! GTTTTTTTTAAGACGAAGCT+GGG + chr1_4:72000015-72000034 None:intergenic 30.0%
!!! TGTTTTTTTTAAGACGAAGC+TGG + chr1_4:72000016-72000035 None:intergenic 30.0%
AAATGAGATGAGGGTAATTT+GGG + chr1_4:72000252-72000271 None:intergenic 30.0%
GAGATTATGAAATGAGATGA+GGG + chr1_4:72000261-72000280 None:intergenic 30.0%
TAAGAATAAGCGAATCACAA+TGG - chr1_4:72000317-72000336 Msa0183170:three_prime_UTR 30.0%
GAATTTAAACAAACAGATGG+TGG - chr1_4:72000661-72000680 Msa0183170:CDS 30.0%
TTTGTATGGATATGGAAGAT+TGG - chr1_4:72000729-72000748 Msa0183170:CDS 30.0%
TTGTATGGATATGGAAGATT+GGG - chr1_4:72000730-72000749 Msa0183170:CDS 30.0%
! GTTGATGAAATGGAGAATAA+TGG - chr1_4:72000778-72000797 Msa0183170:CDS 30.0%
TGTTGTGGATTTGAATGATT+TGG - chr1_4:72000969-72000988 Msa0183170:CDS 30.0%
! CTTATTTGGTTATGTTGCTT+TGG - chr1_4:72001148-72001167 Msa0183170:CDS 30.0%
TCTTTAAGCAATACTTTGAC+CGG + chr1_4:72001281-72001300 None:intergenic 30.0%
ATATAGCAGCAAAATTGCAT+TGG + chr1_4:72001441-72001460 None:intergenic 30.0%
AAAGTTGAAAACAGCAGTAA+AGG + chr1_4:72001540-72001559 None:intergenic 30.0%
! TATCAAATGTTGCTTATCCA+AGG - chr1_4:72001560-72001579 Msa0183170:CDS 30.0%
!! ATATTCGGTATTGGTGTTTG+TGG + chr1_4:72000099-72000118 None:intergenic 35.0%
ACGAATGAGATATTCGGTAT+TGG + chr1_4:72000108-72000127 None:intergenic 35.0%
GAGAAAAGAGTTAACTTACG+GGG + chr1_4:72000229-72000248 None:intergenic 35.0%
GGAGAAAAGAGTTAACTTAC+GGG + chr1_4:72000230-72000249 None:intergenic 35.0%
GGGAGAAAAGAGTTAACTTA+CGG + chr1_4:72000231-72000250 None:intergenic 35.0%
AATGAGATGAGGGTAATTTG+GGG + chr1_4:72000251-72000270 None:intergenic 35.0%
GAAATGAGATGAGGGTAATT+TGG + chr1_4:72000253-72000272 None:intergenic 35.0%
GGAGATTATGAAATGAGATG+AGG + chr1_4:72000262-72000281 None:intergenic 35.0%
!! AAGAAATGGAAGGGTTAGTT+TGG + chr1_4:72000283-72000302 None:intergenic 35.0%
TGAAGTAGCTTCGGAAATTA+AGG + chr1_4:72000419-72000438 None:intergenic 35.0%
!!! GTTGAGTTTTGAAGTAGCTT+CGG + chr1_4:72000428-72000447 None:intergenic 35.0%
TCTCTTCTATGCAAAACTCT+TGG - chr1_4:72000468-72000487 Msa0183170:CDS 35.0%
AGAATAAGCGAAATCAAAGC+CGG + chr1_4:72000521-72000540 None:intergenic 35.0%
CGGGAATTTAAACAAACAGA+TGG - chr1_4:72000658-72000677 Msa0183170:CDS 35.0%
! TTTAAACAAACAGATGGTGG+TGG - chr1_4:72000664-72000683 Msa0183170:CDS 35.0%
! TTAAACAAACAGATGGTGGT+GGG - chr1_4:72000665-72000684 Msa0183170:CDS 35.0%
GACTTGAATTCAAAAGCAGA+AGG + chr1_4:72000706-72000725 None:intergenic 35.0%
! GAACAGAGTTGTTGATGAAA+TGG - chr1_4:72000768-72000787 Msa0183170:CDS 35.0%
!!! TTCAAGTTTTGGAATTCACG+AGG - chr1_4:72000837-72000856 Msa0183170:CDS 35.0%
AGTATGTGGAAATGGTTTCT+TGG - chr1_4:72000860-72000879 Msa0183170:CDS 35.0%
AAATGGTTTCTTGGCTTACA+AGG - chr1_4:72000869-72000888 Msa0183170:CDS 35.0%
CAACATTCCTCATTATCGTT+GGG + chr1_4:72000954-72000973 None:intergenic 35.0%
ACAACATTCCTCATTATCGT+TGG + chr1_4:72000955-72000974 None:intergenic 35.0%
AACGATAATGAGGAATGTTG+TGG - chr1_4:72000954-72000973 Msa0183170:CDS 35.0%
AGAGTTGTTGAATGTGTGTA+TGG - chr1_4:72001005-72001024 Msa0183170:CDS 35.0%
TTGTTGAATGTGTGTATGGA+AGG - chr1_4:72001009-72001028 Msa0183170:CDS 35.0%
! GTGTAATGTGATTTTCGATG+AGG - chr1_4:72001065-72001084 Msa0183170:CDS 35.0%
! GGATTCTAAAGAGGTGAAAT+TGG - chr1_4:72001098-72001117 Msa0183170:CDS 35.0%
!! TTTGGTTATGTTGCTTTGGT+TGG - chr1_4:72001152-72001171 Msa0183170:CDS 35.0%
!! AATTTTGACAGCCTTACCTT+TGG + chr1_4:72001366-72001385 None:intergenic 35.0%
AAGGTAAGGCTGTCAAAATT+TGG - chr1_4:72001366-72001385 Msa0183170:intron 35.0%
TTACTTGTTTGGCATTTCCT+TGG + chr1_4:72001580-72001599 None:intergenic 35.0%
!! ATATTCGGTATTGGTGTTTG+TGG + chr1_4:72000099-72000118 None:intergenic 35.0%
ACGAATGAGATATTCGGTAT+TGG + chr1_4:72000108-72000127 None:intergenic 35.0%
GAGAAAAGAGTTAACTTACG+GGG + chr1_4:72000229-72000248 None:intergenic 35.0%
GGAGAAAAGAGTTAACTTAC+GGG + chr1_4:72000230-72000249 None:intergenic 35.0%
GGGAGAAAAGAGTTAACTTA+CGG + chr1_4:72000231-72000250 None:intergenic 35.0%
AATGAGATGAGGGTAATTTG+GGG + chr1_4:72000251-72000270 None:intergenic 35.0%
GAAATGAGATGAGGGTAATT+TGG + chr1_4:72000253-72000272 None:intergenic 35.0%
GGAGATTATGAAATGAGATG+AGG + chr1_4:72000262-72000281 None:intergenic 35.0%
!! AAGAAATGGAAGGGTTAGTT+TGG + chr1_4:72000283-72000302 None:intergenic 35.0%
TGAAGTAGCTTCGGAAATTA+AGG + chr1_4:72000419-72000438 None:intergenic 35.0%
!!! GTTGAGTTTTGAAGTAGCTT+CGG + chr1_4:72000428-72000447 None:intergenic 35.0%
TCTCTTCTATGCAAAACTCT+TGG - chr1_4:72000468-72000487 Msa0183170:CDS 35.0%
AGAATAAGCGAAATCAAAGC+CGG + chr1_4:72000521-72000540 None:intergenic 35.0%
CGGGAATTTAAACAAACAGA+TGG - chr1_4:72000658-72000677 Msa0183170:CDS 35.0%
! TTTAAACAAACAGATGGTGG+TGG - chr1_4:72000664-72000683 Msa0183170:CDS 35.0%
! TTAAACAAACAGATGGTGGT+GGG - chr1_4:72000665-72000684 Msa0183170:CDS 35.0%
GACTTGAATTCAAAAGCAGA+AGG + chr1_4:72000706-72000725 None:intergenic 35.0%
! GAACAGAGTTGTTGATGAAA+TGG - chr1_4:72000768-72000787 Msa0183170:CDS 35.0%
!!! TTCAAGTTTTGGAATTCACG+AGG - chr1_4:72000837-72000856 Msa0183170:CDS 35.0%
AGTATGTGGAAATGGTTTCT+TGG - chr1_4:72000860-72000879 Msa0183170:CDS 35.0%
AAATGGTTTCTTGGCTTACA+AGG - chr1_4:72000869-72000888 Msa0183170:CDS 35.0%
CAACATTCCTCATTATCGTT+GGG + chr1_4:72000954-72000973 None:intergenic 35.0%
ACAACATTCCTCATTATCGT+TGG + chr1_4:72000955-72000974 None:intergenic 35.0%
AACGATAATGAGGAATGTTG+TGG - chr1_4:72000954-72000973 Msa0183170:CDS 35.0%
AGAGTTGTTGAATGTGTGTA+TGG - chr1_4:72001005-72001024 Msa0183170:CDS 35.0%
TTGTTGAATGTGTGTATGGA+AGG - chr1_4:72001009-72001028 Msa0183170:CDS 35.0%
! GTGTAATGTGATTTTCGATG+AGG - chr1_4:72001065-72001084 Msa0183170:CDS 35.0%
! GGATTCTAAAGAGGTGAAAT+TGG - chr1_4:72001098-72001117 Msa0183170:CDS 35.0%
!! TTTGGTTATGTTGCTTTGGT+TGG - chr1_4:72001152-72001171 Msa0183170:CDS 35.0%
!! AATTTTGACAGCCTTACCTT+TGG + chr1_4:72001366-72001385 None:intergenic 35.0%
AAGGTAAGGCTGTCAAAATT+TGG - chr1_4:72001366-72001385 Msa0183170:intron 35.0%
TTACTTGTTTGGCATTTCCT+TGG + chr1_4:72001580-72001599 None:intergenic 35.0%
!!! TTTTAAGACGAAGCTGGGTT+TGG + chr1_4:72000010-72000029 None:intergenic 40.0%
TTTCGTTAGAGTGCAACGAA+TGG + chr1_4:72000045-72000064 None:intergenic 40.0%
GTTGCACTCTAACGAAACAA+GGG - chr1_4:72000048-72000067 Msa0183170:three_prime_UTR 40.0%
!! TTGTGGTTGAGAGTTTTGTG+AGG + chr1_4:72000082-72000101 None:intergenic 40.0%
AAAGAGTTAACTTACGGGGA+GGG + chr1_4:72000225-72000244 None:intergenic 40.0%
AAAAGAGTTAACTTACGGGG+AGG + chr1_4:72000226-72000245 None:intergenic 40.0%
AGCTGCAACAAGAAATGGAA+GGG + chr1_4:72000292-72000311 None:intergenic 40.0%
TGTAGAGCTGCAACAAGAAA+TGG + chr1_4:72000297-72000316 None:intergenic 40.0%
! TTAAATCGGCGATGATGGTT+GGG + chr1_4:72000354-72000373 None:intergenic 40.0%
! ATTAAATCGGCGATGATGGT+TGG + chr1_4:72000355-72000374 None:intergenic 40.0%
GTGGAGTAGGGTGATTAAAT+CGG + chr1_4:72000368-72000387 None:intergenic 40.0%
! GGAAATTAAGGTCTGGGATT+CGG + chr1_4:72000407-72000426 None:intergenic 40.0%
AGCTTCGGAAATTAAGGTCT+GGG + chr1_4:72000413-72000432 None:intergenic 40.0%
TAGCTTCGGAAATTAAGGTC+TGG + chr1_4:72000414-72000433 None:intergenic 40.0%
AAGTGTGAAGAAGGTTGTTG+AGG + chr1_4:72000546-72000565 None:intergenic 40.0%
! TTGAAGAGGAAGTGTGAAGA+AGG + chr1_4:72000555-72000574 None:intergenic 40.0%
GCGTTTGACGTAAATTGAAG+AGG + chr1_4:72000569-72000588 None:intergenic 40.0%
GCTTATGAATCCATGGTTAG+TGG - chr1_4:72000592-72000611 Msa0183170:CDS 40.0%
TTTCTTGGCTTACAAGGATG+AGG - chr1_4:72000875-72000894 Msa0183170:CDS 40.0%
CTTACAAGGATGAGGAATTC+TGG - chr1_4:72000883-72000902 Msa0183170:CDS 40.0%
CGTTGGGCAAGAATTTGAAA+CGG + chr1_4:72000938-72000957 None:intergenic 40.0%
ATTCTTGCCCAACGATAATG+AGG - chr1_4:72000944-72000963 Msa0183170:CDS 40.0%
TGAATGTGTGTATGGAAGGA+TGG - chr1_4:72001013-72001032 Msa0183170:CDS 40.0%
GAATGTGTGTATGGAAGGAT+GGG - chr1_4:72001014-72001033 Msa0183170:CDS 40.0%
! TGTGATTTTCGATGAGGTGA+TGG - chr1_4:72001071-72001090 Msa0183170:CDS 40.0%
GAGGTGAAATTGGATTTGCA+TGG - chr1_4:72001108-72001127 Msa0183170:CDS 40.0%
GATTTGCATGGATTTCACCT+GGG - chr1_4:72001120-72001139 Msa0183170:CDS 40.0%
TAACCAAATAAGCTGAACCC+AGG + chr1_4:72001140-72001159 None:intergenic 40.0%
TGAAGATGAAAAGTCCACTC+AGG - chr1_4:72001309-72001328 Msa0183170:intron 40.0%
AAAGTCCACTCAGGATTGAT+AGG - chr1_4:72001318-72001337 Msa0183170:intron 40.0%
TTCTTCCTATCAATCCTGAG+TGG + chr1_4:72001326-72001345 None:intergenic 40.0%
AGGATTGATAGGAAGAACAC+TGG - chr1_4:72001329-72001348 Msa0183170:intron 40.0%
!!! TTTTAAGACGAAGCTGGGTT+TGG + chr1_4:72000010-72000029 None:intergenic 40.0%
TTTCGTTAGAGTGCAACGAA+TGG + chr1_4:72000045-72000064 None:intergenic 40.0%
GTTGCACTCTAACGAAACAA+GGG - chr1_4:72000048-72000067 Msa0183170:three_prime_UTR 40.0%
!! TTGTGGTTGAGAGTTTTGTG+AGG + chr1_4:72000082-72000101 None:intergenic 40.0%
AAAGAGTTAACTTACGGGGA+GGG + chr1_4:72000225-72000244 None:intergenic 40.0%
AAAAGAGTTAACTTACGGGG+AGG + chr1_4:72000226-72000245 None:intergenic 40.0%
AGCTGCAACAAGAAATGGAA+GGG + chr1_4:72000292-72000311 None:intergenic 40.0%
TGTAGAGCTGCAACAAGAAA+TGG + chr1_4:72000297-72000316 None:intergenic 40.0%
! TTAAATCGGCGATGATGGTT+GGG + chr1_4:72000354-72000373 None:intergenic 40.0%
! ATTAAATCGGCGATGATGGT+TGG + chr1_4:72000355-72000374 None:intergenic 40.0%
GTGGAGTAGGGTGATTAAAT+CGG + chr1_4:72000368-72000387 None:intergenic 40.0%
! GGAAATTAAGGTCTGGGATT+CGG + chr1_4:72000407-72000426 None:intergenic 40.0%
AGCTTCGGAAATTAAGGTCT+GGG + chr1_4:72000413-72000432 None:intergenic 40.0%
TAGCTTCGGAAATTAAGGTC+TGG + chr1_4:72000414-72000433 None:intergenic 40.0%
AAGTGTGAAGAAGGTTGTTG+AGG + chr1_4:72000546-72000565 None:intergenic 40.0%
! TTGAAGAGGAAGTGTGAAGA+AGG + chr1_4:72000555-72000574 None:intergenic 40.0%
GCGTTTGACGTAAATTGAAG+AGG + chr1_4:72000569-72000588 None:intergenic 40.0%
GCTTATGAATCCATGGTTAG+TGG - chr1_4:72000592-72000611 Msa0183170:CDS 40.0%
TTTCTTGGCTTACAAGGATG+AGG - chr1_4:72000875-72000894 Msa0183170:CDS 40.0%
CTTACAAGGATGAGGAATTC+TGG - chr1_4:72000883-72000902 Msa0183170:CDS 40.0%
CGTTGGGCAAGAATTTGAAA+CGG + chr1_4:72000938-72000957 None:intergenic 40.0%
ATTCTTGCCCAACGATAATG+AGG - chr1_4:72000944-72000963 Msa0183170:CDS 40.0%
TGAATGTGTGTATGGAAGGA+TGG - chr1_4:72001013-72001032 Msa0183170:CDS 40.0%
GAATGTGTGTATGGAAGGAT+GGG - chr1_4:72001014-72001033 Msa0183170:CDS 40.0%
! TGTGATTTTCGATGAGGTGA+TGG - chr1_4:72001071-72001090 Msa0183170:CDS 40.0%
GAGGTGAAATTGGATTTGCA+TGG - chr1_4:72001108-72001127 Msa0183170:CDS 40.0%
GATTTGCATGGATTTCACCT+GGG - chr1_4:72001120-72001139 Msa0183170:CDS 40.0%
TAACCAAATAAGCTGAACCC+AGG + chr1_4:72001140-72001159 None:intergenic 40.0%
TGAAGATGAAAAGTCCACTC+AGG - chr1_4:72001309-72001328 Msa0183170:intron 40.0%
AAAGTCCACTCAGGATTGAT+AGG - chr1_4:72001318-72001337 Msa0183170:intron 40.0%
TTCTTCCTATCAATCCTGAG+TGG + chr1_4:72001326-72001345 None:intergenic 40.0%
AGGATTGATAGGAAGAACAC+TGG - chr1_4:72001329-72001348 Msa0183170:intron 40.0%
CGTTGCACTCTAACGAAACA+AGG - chr1_4:72000047-72000066 Msa0183170:three_prime_UTR 45.0%
GTGGAGAGTAGTACGGATTT+GGG + chr1_4:72000149-72000168 None:intergenic 45.0%
AGTGGAGAGTAGTACGGATT+TGG + chr1_4:72000150-72000169 None:intergenic 45.0%
AGTGAGAGTGGAGAGTAGTA+CGG + chr1_4:72000156-72000175 None:intergenic 45.0%
GAGCTGCAACAAGAAATGGA+AGG + chr1_4:72000293-72000312 None:intergenic 45.0%
GCGAATCACAATGGTACACA+TGG - chr1_4:72000326-72000345 Msa0183170:three_prime_UTR 45.0%
GGTGATTAAATCGGCGATGA+TGG + chr1_4:72000359-72000378 None:intergenic 45.0%
GCGTTTGTGTTTGTGGAGTA+GGG + chr1_4:72000380-72000399 None:intergenic 45.0%
AGCGTTTGTGTTTGTGGAGT+AGG + chr1_4:72000381-72000400 None:intergenic 45.0%
ACGCAGAGCTTATGAATCCA+TGG - chr1_4:72000585-72000604 Msa0183170:CDS 45.0%
TGCACACAATCCACTAACCA+TGG + chr1_4:72000605-72000624 None:intergenic 45.0%
!! GGTTAGTGGATTGTGTGCAA+TGG - chr1_4:72000606-72000625 Msa0183170:CDS 45.0%
! TGGAATTCACGAGGAGTATG+TGG - chr1_4:72000846-72000865 Msa0183170:CDS 45.0%
! TCACGAGGAGTATGTGGAAA+TGG - chr1_4:72000852-72000871 Msa0183170:CDS 45.0%
TATGGAAGGATGGGAAGCTA+CGG - chr1_4:72001023-72001042 Msa0183170:CDS 45.0%
!! TTTTCGATGAGGTGATGGTG+TGG - chr1_4:72001076-72001095 Msa0183170:CDS 45.0%
! TTTCGATGAGGTGATGGTGT+GGG - chr1_4:72001077-72001096 Msa0183170:CDS 45.0%
! GATGGTGTGGGATTCTAAAG+AGG - chr1_4:72001089-72001108 Msa0183170:CDS 45.0%
GGATTTGCATGGATTTCACC+TGG - chr1_4:72001119-72001138 Msa0183170:CDS 45.0%
TCACCTGGGTTCAGCTTATT+TGG - chr1_4:72001134-72001153 Msa0183170:CDS 45.0%
!! GGTTATGTTGCTTTGGTTGG+AGG - chr1_4:72001155-72001174 Msa0183170:CDS 45.0%
GATTCCTGCTGAAATCACTG+TGG - chr1_4:72001214-72001233 Msa0183170:CDS 45.0%
CTGAAATCACTGTGGTCTGT+GGG - chr1_4:72001222-72001241 Msa0183170:CDS 45.0%
TGAAATCACTGTGGTCTGTG+GGG - chr1_4:72001223-72001242 Msa0183170:CDS 45.0%
! GGAAAGCATAGCAATGTGAG+AGG - chr1_4:72001248-72001267 Msa0183170:CDS 45.0%
! CTGCTTTGTTGCCAAAGGTA+AGG - chr1_4:72001352-72001371 Msa0183170:intron 45.0%
CGTTGCACTCTAACGAAACA+AGG - chr1_4:72000047-72000066 Msa0183170:three_prime_UTR 45.0%
GTGGAGAGTAGTACGGATTT+GGG + chr1_4:72000149-72000168 None:intergenic 45.0%
AGTGGAGAGTAGTACGGATT+TGG + chr1_4:72000150-72000169 None:intergenic 45.0%
AGTGAGAGTGGAGAGTAGTA+CGG + chr1_4:72000156-72000175 None:intergenic 45.0%
GAGCTGCAACAAGAAATGGA+AGG + chr1_4:72000293-72000312 None:intergenic 45.0%
GCGAATCACAATGGTACACA+TGG - chr1_4:72000326-72000345 Msa0183170:three_prime_UTR 45.0%
GGTGATTAAATCGGCGATGA+TGG + chr1_4:72000359-72000378 None:intergenic 45.0%
GCGTTTGTGTTTGTGGAGTA+GGG + chr1_4:72000380-72000399 None:intergenic 45.0%
AGCGTTTGTGTTTGTGGAGT+AGG + chr1_4:72000381-72000400 None:intergenic 45.0%
ACGCAGAGCTTATGAATCCA+TGG - chr1_4:72000585-72000604 Msa0183170:CDS 45.0%
TGCACACAATCCACTAACCA+TGG + chr1_4:72000605-72000624 None:intergenic 45.0%
!! GGTTAGTGGATTGTGTGCAA+TGG - chr1_4:72000606-72000625 Msa0183170:CDS 45.0%
! TGGAATTCACGAGGAGTATG+TGG - chr1_4:72000846-72000865 Msa0183170:CDS 45.0%
! TCACGAGGAGTATGTGGAAA+TGG - chr1_4:72000852-72000871 Msa0183170:CDS 45.0%
TATGGAAGGATGGGAAGCTA+CGG - chr1_4:72001023-72001042 Msa0183170:CDS 45.0%
!! TTTTCGATGAGGTGATGGTG+TGG - chr1_4:72001076-72001095 Msa0183170:CDS 45.0%
! TTTCGATGAGGTGATGGTGT+GGG - chr1_4:72001077-72001096 Msa0183170:CDS 45.0%
! GATGGTGTGGGATTCTAAAG+AGG - chr1_4:72001089-72001108 Msa0183170:CDS 45.0%
GGATTTGCATGGATTTCACC+TGG - chr1_4:72001119-72001138 Msa0183170:CDS 45.0%
TCACCTGGGTTCAGCTTATT+TGG - chr1_4:72001134-72001153 Msa0183170:CDS 45.0%
!! GGTTATGTTGCTTTGGTTGG+AGG - chr1_4:72001155-72001174 Msa0183170:CDS 45.0%
GATTCCTGCTGAAATCACTG+TGG - chr1_4:72001214-72001233 Msa0183170:CDS 45.0%
CTGAAATCACTGTGGTCTGT+GGG - chr1_4:72001222-72001241 Msa0183170:CDS 45.0%
TGAAATCACTGTGGTCTGTG+GGG - chr1_4:72001223-72001242 Msa0183170:CDS 45.0%
! GGAAAGCATAGCAATGTGAG+AGG - chr1_4:72001248-72001267 Msa0183170:CDS 45.0%
! CTGCTTTGTTGCCAAAGGTA+AGG - chr1_4:72001352-72001371 Msa0183170:intron 45.0%
GAGTAGTACGGATTTGGGTG+AGG + chr1_4:72000144-72000163 None:intergenic 50.0%
CGGTGTAGCGTTTGTGTTTG+TGG + chr1_4:72000387-72000406 None:intergenic 50.0%
TCCAAACGCGCTTCTCAAAC+CGG - chr1_4:72000499-72000518 Msa0183170:CDS 50.0%
TGCAATGGATAAGCCTCGTG+AGG - chr1_4:72000621-72000640 Msa0183170:CDS 50.0%
GTGAGGCTGAGAATCTGGTT+CGG - chr1_4:72000638-72000657 Msa0183170:CDS 50.0%
! TGAGGCTGAGAATCTGGTTC+GGG - chr1_4:72000639-72000658 Msa0183170:CDS 50.0%
ATGGGAAGCTACGGTGGTTA+AGG - chr1_4:72001032-72001051 Msa0183170:CDS 50.0%
CAGACCACAGTGATTTCAGC+AGG + chr1_4:72001221-72001240 None:intergenic 50.0%
GCTGAAATCACTGTGGTCTG+TGG - chr1_4:72001221-72001240 Msa0183170:CDS 50.0%
CAATGTGAGAGGAGAATCGC+CGG - chr1_4:72001259-72001278 Msa0183170:CDS 50.0%
! ACTGGCTGCTTTGTTGCCAA+AGG - chr1_4:72001347-72001366 Msa0183170:intron 50.0%
GAGTAGTACGGATTTGGGTG+AGG + chr1_4:72000144-72000163 None:intergenic 50.0%
CGGTGTAGCGTTTGTGTTTG+TGG + chr1_4:72000387-72000406 None:intergenic 50.0%
TCCAAACGCGCTTCTCAAAC+CGG - chr1_4:72000499-72000518 Msa0183170:CDS 50.0%
TGCAATGGATAAGCCTCGTG+AGG - chr1_4:72000621-72000640 Msa0183170:CDS 50.0%
GTGAGGCTGAGAATCTGGTT+CGG - chr1_4:72000638-72000657 Msa0183170:CDS 50.0%
! TGAGGCTGAGAATCTGGTTC+GGG - chr1_4:72000639-72000658 Msa0183170:CDS 50.0%
ATGGGAAGCTACGGTGGTTA+AGG - chr1_4:72001032-72001051 Msa0183170:CDS 50.0%
CAGACCACAGTGATTTCAGC+AGG + chr1_4:72001221-72001240 None:intergenic 50.0%
GCTGAAATCACTGTGGTCTG+TGG - chr1_4:72001221-72001240 Msa0183170:CDS 50.0%
CAATGTGAGAGGAGAATCGC+CGG - chr1_4:72001259-72001278 Msa0183170:CDS 50.0%
! ACTGGCTGCTTTGTTGCCAA+AGG - chr1_4:72001347-72001366 Msa0183170:intron 50.0%
! TGGGTTTGGAGTTGAGGAGG+AGG + chr1_4:71999996-72000015 None:intergenic 55.0%
! AGCTGGGTTTGGAGTTGAGG+AGG + chr1_4:71999999-72000018 None:intergenic 55.0%
! CGAAGCTGGGTTTGGAGTTG+AGG + chr1_4:72000002-72000021 None:intergenic 55.0%
AGAGAGGAGGTGAGTGAGAG+TGG + chr1_4:72000168-72000187 None:intergenic 55.0%
! AGAAGAGAGGTGGTGGTGAG+CGG + chr1_4:72000198-72000217 None:intergenic 55.0%
ACCAGATTCTCAGCCTCACG+AGG + chr1_4:72000637-72000656 None:intergenic 55.0%
GGTTGGAGGAGATGCAGAAG+AGG - chr1_4:72001169-72001188 Msa0183170:CDS 55.0%
ATCACTGTGGTCTGTGGGGT+TGG - chr1_4:72001227-72001246 Msa0183170:CDS 55.0%
! TGGGTTTGGAGTTGAGGAGG+AGG + chr1_4:71999996-72000015 None:intergenic 55.0%
! AGCTGGGTTTGGAGTTGAGG+AGG + chr1_4:71999999-72000018 None:intergenic 55.0%
! CGAAGCTGGGTTTGGAGTTG+AGG + chr1_4:72000002-72000021 None:intergenic 55.0%
AGAGAGGAGGTGAGTGAGAG+TGG + chr1_4:72000168-72000187 None:intergenic 55.0%
! AGAAGAGAGGTGGTGGTGAG+CGG + chr1_4:72000198-72000217 None:intergenic 55.0%
ACCAGATTCTCAGCCTCACG+AGG + chr1_4:72000637-72000656 None:intergenic 55.0%
GGTTGGAGGAGATGCAGAAG+AGG - chr1_4:72001169-72001188 Msa0183170:CDS 55.0%
ATCACTGTGGTCTGTGGGGT+TGG - chr1_4:72001227-72001246 Msa0183170:CDS 55.0%
!! GCCGGTTTGAGAAGCGCGTT+TGG + chr1_4:72000503-72000522 None:intergenic 60.0%
GCCTCGTGAGGCTGAGAATC+TGG - chr1_4:72000633-72000652 Msa0183170:CDS 60.0%
GGAAGGATGGGAAGCTACGG+TGG - chr1_4:72001026-72001045 Msa0183170:CDS 60.0%
!! GCCGGTTTGAGAAGCGCGTT+TGG + chr1_4:72000503-72000522 None:intergenic 60.0%
GCCTCGTGAGGCTGAGAATC+TGG - chr1_4:72000633-72000652 Msa0183170:CDS 60.0%
GGAAGGATGGGAAGCTACGG+TGG - chr1_4:72001026-72001045 Msa0183170:CDS 60.0%
! AGGTGGTGGTGAGCGGTGGT+GGG + chr1_4:72000191-72000210 None:intergenic 65.0%
! AGAGAGGTGGTGGTGAGCGG+TGG + chr1_4:72000195-72000214 None:intergenic 65.0%
GGGCGAGAGAAGAGAGGTGG+TGG + chr1_4:72000205-72000224 None:intergenic 65.0%
GGAGGGCGAGAGAAGAGAGG+TGG + chr1_4:72000208-72000227 None:intergenic 65.0%
! AGGTGGTGGTGAGCGGTGGT+GGG + chr1_4:72000191-72000210 None:intergenic 65.0%
! AGAGAGGTGGTGGTGAGCGG+TGG + chr1_4:72000195-72000214 None:intergenic 65.0%
GGGCGAGAGAAGAGAGGTGG+TGG + chr1_4:72000205-72000224 None:intergenic 65.0%
GGAGGGCGAGAGAAGAGAGG+TGG + chr1_4:72000208-72000227 None:intergenic 65.0%
!! GAGCGGTGGTGGGAGAGAGG+AGG + chr1_4:72000181-72000200 None:intergenic 70.0%
!! GGTGAGCGGTGGTGGGAGAG+AGG + chr1_4:72000184-72000203 None:intergenic 70.0%
! GAGGTGGTGGTGAGCGGTGG+TGG + chr1_4:72000192-72000211 None:intergenic 70.0%
CGGGGAGGGCGAGAGAAGAG+AGG + chr1_4:72000211-72000230 None:intergenic 70.0%
!! GAGCGGTGGTGGGAGAGAGG+AGG + chr1_4:72000181-72000200 None:intergenic 70.0%
!! GGTGAGCGGTGGTGGGAGAG+AGG + chr1_4:72000184-72000203 None:intergenic 70.0%
! GAGGTGGTGGTGAGCGGTGG+TGG + chr1_4:72000192-72000211 None:intergenic 70.0%
CGGGGAGGGCGAGAGAAGAG+AGG + chr1_4:72000211-72000230 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 71999951 72001670 71999951 ID=Msa0183170;Name=Msa0183170
chr1_4 mRNA 71999951 72001670 71999951 ID=Msa0183170-mRNA-1;Parent=Msa0183170;Name=Msa0183170-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0.5|1|0|0.5|2|404|386
chr1_4 exon 71999951 72001311 71999951 ID=Msa0183170-mRNA-1:exon:24260;Parent=Msa0183170-mRNA-1
chr1_4 exon 72001467 72001670 72001467 ID=Msa0183170-mRNA-1:exon:24259;Parent=Msa0183170-mRNA-1
chr1_4 CDS 72001467 72001670 72001467 ID=Msa0183170-mRNA-1:cds;Parent=Msa0183170-mRNA-1
chr1_4 CDS 72000355 72001311 72000355 ID=Msa0183170-mRNA-1:cds;Parent=Msa0183170-mRNA-1
chr1_4 three_prime_UTR 71999951 72000354 71999951 ID=Msa0183170-mRNA-1:three_prime_utr;Parent=Msa0183170-mRNA-1
Gene Sequence

>Msa0183170

ATGACGCTGAGATTTAAACTCGAAATTCAACAATGTCTTCTTCCTCCTCCTCAACTCCAAACCCAGCTTCGTCTTAAAAAAAACAGTAACACCATTCGTTGCACTCTAACGAAACAAGGGCAACGATTCCTCACAAAACTCTCAACCACAAACACCAATACCGAATATCTCATTCGTAAATTCGTACAATCCTCACCCAAATCCCTCTACATAAGAATAAGCGAATCACAATGGTACACATGGAACCCAACCATCATCGCCGATTTAATCACCCTACTCCACAAACACAAACGCTACACCGAATCCCAGACCTTAATTTCCGAAGCTACTTCAAAACTCAACAACAAAGAACGTGACATTGTTCTCTTCTATGCAAAACTCTTGGACTCACATTCCAAACGCGCTTCTCAAACCGGCTTTGATTTCGCTTATTCTCACCTCAACAACCTTCTTCACACTTCCTCTTCAATTTACGTCAAACGCAGAGCTTATGAATCCATGGTTAGTGGATTGTGTGCAATGGATAAGCCTCGTGAGGCTGAGAATCTGGTTCGGGAATTTAAACAAACAGATGGTGGTGGGAAGATTCAGCTTCAACCTTCTGCTTTTGAATTCAAGTCTATTTTGTATGGATATGGAAGATTGGGTTTGTTTCATGATTTGAACAGAGTTGTTGATGAAATGGAGAATAATGGGTTTGTTATTGATACTGTTTGTTATAATATGATTCTTTCAAGTTTTGGAATTCACGAGGAGTATGTGGAAATGGTTTCTTGGCTTACAAGGATGAGGAATTCTGGTGTTCCGTTTTCTGTTAGAACTTATAATTCCGTTTCAAATTCTTGCCCAACGATAATGAGGAATGTTGTGGATTTGAATGATTTGGCATTGTCGATTGAAGAGTTGTTGAATGTGTGTATGGAAGGATGGGAAGCTACGGTGGTTAAGGAGTTGCTATCGTGTAATGTGATTTTCGATGAGGTGATGGTGTGGGATTCTAAAGAGGTGAAATTGGATTTGCATGGATTTCACCTGGGTTCAGCTTATTTGGTTATGTTGCTTTGGTTGGAGGAGATGCAGAAGAGGTTGTTAATGCTTCAAATCATGAGATTCCTGCTGAAATCACTGTGGTCTGTGGGGTTGGAAAGCATAGCAATGTGA

Protein sequence

>Msa0183170

MTLRFKLEIQQCLLPPPQLQTQLRLKKNSNTIRCTLTKQGQRFLTKLSTTNTNTEYLIRKFVQSSPKSLYIRISESQWYTWNPTIIADLITLLHKHKRYTESQTLISEATSKLNNKERDIVLFYAKLLDSHSKRASQTGFDFAYSHLNNLLHTSSSIYVKRRAYESMVSGLCAMDKPREAENLVREFKQTDGGGKIQLQPSAFEFKSILYGYGRLGLFHDLNRVVDEMENNGFVIDTVCYNMILSSFGIHEEYVEMVSWLTRMRNSGVPFSVRTYNSVSNSCPTIMRNVVDLNDLALSIEELLNVCMEGWEATVVKELLSCNVIFDEVMVWDSKEVKLDLHGFHLGSAYLVMLLWLEEMQKRLLMLQIMRFLLKSLWSVGLESIAM*