AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0112290


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0112290 MtrunA17_Chr1g0196111 90.652 460 24 1 97 537 9 468 0.0 843
Msa0112290 MtrunA17_Chr4g0059321 48.700 423 193 3 101 499 166 588 5.08e-137 409
Msa0112290 MtrunA17_Chr6g0448981 43.142 452 223 7 74 500 96 538 1.29e-110 340
Msa0112290 MtrunA17_Chr1g0196121 86.885 122 10 2 1 122 1 116 1.88e-63 204
Msa0112290 MtrunA17_Chr6g0450671 30.268 261 161 8 121 372 180 428 3.25e-14 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0112290 AT2G47940.1 61.613 620 142 10 1 537 1 607 0.0 708
Msa0112290 AT2G47940.2 61.874 619 141 11 1 537 1 606 0.0 707
Msa0112290 AT5G40200.1 44.309 492 222 7 32 499 123 586 4.31e-131 394
Msa0112290 AT5G36950.1 40.929 452 232 8 75 500 129 571 5.21e-101 317
Msa0112290 AT1G65640.2 38.515 431 224 7 88 498 104 513 9.44e-90 285
Msa0112290 AT1G65640.1 42.407 349 184 5 88 435 104 436 2.76e-86 274
Msa0112290 AT1G65630.1 36.782 435 242 9 101 515 133 554 5.44e-82 266
Msa0112290 AT5G40560.1 36.465 447 232 9 76 500 57 473 7.14e-77 251
Msa0112290 AT3G16540.1 32.331 399 250 6 108 504 155 535 1.30e-59 207
Msa0112290 AT3G16550.1 32.048 415 228 8 108 498 115 499 9.76e-59 203
Msa0112290 AT1G51150.1 41.379 116 68 0 101 216 94 209 6.79e-25 103
Msa0112290 AT5G54745.1 33.333 147 67 4 88 232 74 191 7.45e-14 70.9
Msa0112290 AT3G27925.1 28.352 261 166 8 121 372 187 435 5.19e-13 71.6
Msa0112290 AT3G27925.2 28.352 261 166 8 121 372 187 435 5.19e-13 71.6
Msa0112290 AT5G39830.1 27.612 268 155 12 120 369 197 443 2.55e-12 69.3

Find 146 sgRNAs with CRISPR-Local

Find 593 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATCGCATATTCTGTATTT+TGG 0.091159 1_3:-26841474 Msa0112290:three_prime_UTR
GTGCATTGGGGTGGCATTTC+AGG 0.121430 1_3:-26845481 Msa0112290:intron
ATTTACCTGTCCTTTGAAAT+TGG 0.159675 1_3:+26850257 None:intergenic
TCATGATCAGCTAAAGTTAT+TGG 0.185967 1_3:-26842590 Msa0112290:intron
TATTCATTTGCAAGGTTTAA+AGG 0.216596 1_3:-26842556 Msa0112290:CDS
CAGTAGAAAGCGAGGAGTTT+TGG 0.221279 1_3:-26846783 Msa0112290:CDS
CCAACTTCAAAATTTGAAAC+TGG 0.272180 1_3:+26841860 None:intergenic
TGATGCAAATAATGTATTAA+AGG 0.283856 1_3:-26843763 Msa0112290:CDS
CAACCACCAGACCAGGAATT+TGG 0.295454 1_3:-26841890 Msa0112290:CDS
GATGTGGAACCTCTTAAATT+TGG 0.297774 1_3:-26846757 Msa0112290:CDS
TGGACGTTTGCCAGTTCTTC+AGG 0.302967 1_3:-26846737 Msa0112290:intron
CTTTGTCTTGCAGGGTGTAT+TGG 0.305421 1_3:-26843808 Msa0112290:intron
CCTTCCTACTTAATTATTGC+CGG 0.308967 1_3:-26842892 Msa0112290:CDS
AGATTGCTATGCTGCTGTTT+TGG 0.312140 1_3:-26842029 Msa0112290:CDS
CTCCTAGGTTTCCCTTGTCT+TGG 0.319367 1_3:-26844337 Msa0112290:intron
TTTACCTGTCCTTTGAAATT+GGG 0.327411 1_3:+26850258 None:intergenic
TCTGAAGATGCTGAGAATAT+TGG 0.329846 1_3:-26844885 Msa0112290:CDS
AGGAACGTGAAGATTGTATA+GGG 0.339523 1_3:-26842702 Msa0112290:CDS
GTGACCATATGCTTCAAATA+TGG 0.350181 1_3:+26841763 None:intergenic
ATTCATTTGCAAGGTTTAAA+GGG 0.357832 1_3:-26842555 Msa0112290:CDS
GCAGAACTTGGTATCGTTAG+AGG 0.364713 1_3:-26843084 Msa0112290:CDS
TTTAAACCCACGAGTTCATT+TGG 0.374117 1_3:-26843034 Msa0112290:intron
AAATGAGATACAACTGTTGA+TGG 0.387290 1_3:+26844852 None:intergenic
GTTGCCCCTCATACTGTTGC+TGG 0.389089 1_3:+26841720 None:intergenic
CTCCTTGATCGTTGAACGCT+GGG 0.390026 1_3:+26845505 None:intergenic
ACGATCAAGGAGAGTGCATT+GGG 0.390362 1_3:-26845494 Msa0112290:CDS
ACAATGTTATACAGATTTGC+AGG 0.393430 1_3:-26843114 Msa0112290:intron
AAGGATTCTGTAACGGTTGT+GGG 0.394720 1_3:-26845929 Msa0112290:CDS
TCATCTTTGCTGAGAGACTA+TGG 0.395374 1_3:-26841980 Msa0112290:CDS
GAAAAGAATGGCAAGTATAC+TGG 0.395730 1_3:-26844816 Msa0112290:intron
CATGGATCGTCTGAGTTGTT+AGG 0.397668 1_3:-26845753 Msa0112290:CDS
TTGGCCACGACGGATTGCTC+TGG 0.403272 1_3:-26841841 Msa0112290:CDS
CTGGGCTATCACCAAATTCC+TGG 0.406265 1_3:+26841879 None:intergenic
AAAAGTCCAGCAACAGTATG+AGG 0.414043 1_3:-26841726 Msa0112290:three_prime_UTR
CTTGAAGACTTAAAAGAAGC+TGG 0.416711 1_3:+26849982 None:intergenic
TTCAAACATGCTCGCAGTGC+AGG 0.417589 1_3:+26844289 None:intergenic
GAAGGATTCTGTAACGGTTG+TGG 0.421436 1_3:-26845930 Msa0112290:intron
CTATCACCAAATTCCTGGTC+TGG 0.424623 1_3:+26841884 None:intergenic
TTGAGCTGGACTCTAAATAA+TGG 0.425152 1_3:+26841344 None:intergenic
CTTCCAAGTTTATCAAATCA+AGG 0.434284 1_3:+26841524 None:intergenic
TAGAGAAGAGACGGGACTAT+AGG 0.436022 1_3:-26841599 Msa0112290:three_prime_UTR
TCAAAAGAGGAAAGGTCTAC+TGG 0.436520 1_3:-26850018 Msa0112290:CDS
TTCAAACATAAGATACTAGA+AGG 0.437897 1_3:-26850538 Msa0112290:five_prime_UTR
TGTTAGCGTGAAATTTCTCT+TGG 0.438643 1_3:-26841789 Msa0112290:three_prime_UTR
GTTCCCTTTCATATTGATGA+AGG 0.442609 1_3:-26842919 Msa0112290:CDS
GAGGAACGTGAAGATTGTAT+AGG 0.444272 1_3:-26842703 Msa0112290:CDS
GGCAAACGTCCAAATTTAAG+AGG 0.453895 1_3:+26846748 None:intergenic
ACTCCTTGATTTGATAAACT+TGG 0.467087 1_3:-26841527 Msa0112290:three_prime_UTR
GTGGATTCACAAGAAGTAGA+AGG 0.468763 1_3:-26841917 Msa0112290:CDS
CTGACTGACTACGAAAAGAA+TGG 0.470639 1_3:-26844828 Msa0112290:CDS
ACATTATTTGCATCAGAAGT+TGG 0.472154 1_3:+26843771 None:intergenic
GAGGCCATATTTGAAGCATA+TGG 0.472255 1_3:-26841767 Msa0112290:three_prime_UTR
ATAAAGTACCTGCTGATCCT+TGG 0.472858 1_3:+26849933 None:intergenic
TAGCGTGAAATTTCTCTTGG+AGG 0.479525 1_3:-26841786 Msa0112290:three_prime_UTR
TCAATCAATGGTTCTGAAAG+AGG 0.483299 1_3:+26842856 None:intergenic
TCTCCTTGATCGTTGAACGC+TGG 0.484829 1_3:+26845504 None:intergenic
GCAGGTGATACTGCAGAACT+TGG 0.490497 1_3:-26843096 Msa0112290:CDS
AATTCTGACCCCAATTTCAA+AGG 0.495015 1_3:-26850267 Msa0112290:CDS
TAAATCACAACCAACGGCTC+TGG 0.496717 1_3:+26846816 None:intergenic
ACGGTTGTGGGATATCCTCT+TGG 0.503638 1_3:-26845917 Msa0112290:CDS
ACTTCTTGTGAATCCACATA+GGG 0.503832 1_3:+26841923 None:intergenic
CTGACCTTCATCAATATGAA+AGG 0.505131 1_3:+26842915 None:intergenic
TTACCTGTCCTTTGAAATTG+GGG 0.507312 1_3:+26850259 None:intergenic
CAAATTCCTGGTCTGGTGGT+TGG 0.509803 1_3:+26841891 None:intergenic
TGACCCCAATTTCAAAGGAC+AGG 0.510011 1_3:-26850262 Msa0112290:intron
ACAAATTGTAATTCTCTCAC+AGG 0.514924 1_3:-26842530 Msa0112290:intron
GGCCCAGCGTTCAACGATCA+AGG 0.515753 1_3:-26845507 Msa0112290:CDS
AATGCAACATACTCAATCAA+TGG 0.517559 1_3:+26842844 None:intergenic
CACGCTAACATGACATCTCC+AGG 0.520260 1_3:+26841802 None:intergenic
ATTCTCTCATTTGAGCGGAA+TGG 0.521849 1_3:+26843598 None:intergenic
TCTAAAATAATATGAGACAG+AGG 0.522377 1_3:+26841618 None:intergenic
CAACTTCAAAATTTGAAACT+GGG 0.523013 1_3:+26841861 None:intergenic
GGACTATAGGCAAGAGCTCA+TGG 0.530933 1_3:-26841586 Msa0112290:three_prime_UTR
CAGGTTACATCATATGCTCA+TGG 0.532853 1_3:-26845771 Msa0112290:CDS
AGGTGACCAACCACCAGACC+AGG 0.533734 1_3:-26841897 Msa0112290:CDS
TGGCCACGACGGATTGCTCT+GGG 0.534074 1_3:-26841840 Msa0112290:CDS
AGAAGATAACACAGAGAACA+TGG 0.534825 1_3:+26850383 None:intergenic
TGAAGATATGAGCAATCAGC+AGG 0.534944 1_3:-26842311 Msa0112290:CDS
AACGATCAAGGAGAGTGCAT+TGG 0.536494 1_3:-26845495 Msa0112290:CDS
AGGTTAAAGTCAAGAGAAGA+GGG 0.538556 1_3:-26847889 Msa0112290:CDS
ATTGATGCAGCAATAAATCC+TGG 0.539309 1_3:-26845723 Msa0112290:intron
TACTTCTTGTGAATCCACAT+AGG 0.544023 1_3:+26841922 None:intergenic
GCTGCAATGAATAGAAATGA+AGG 0.544707 1_3:+26850305 None:intergenic
TCACCAAATTCCTGGTCTGG+TGG 0.545587 1_3:+26841887 None:intergenic
GACACAATTTCAGTGACAAA+GGG 0.549526 1_3:-26845890 Msa0112290:CDS
TGACTCGAAATATGTGGCTA+AGG 0.550800 1_3:-26847864 Msa0112290:intron
TTGGGGTCAGAATTAGAAGA+AGG 0.554085 1_3:+26850276 None:intergenic
TTATTCATGTGGTCACATCA+AGG 0.554684 1_3:+26841698 None:intergenic
GTTGATGTTTCAGAATTCGT+TGG 0.555603 1_3:-26850049 Msa0112290:intron
AGATCAGAAGATCTTTCAGA+TGG 0.557002 1_3:+26841953 None:intergenic
TCACATACCAAATGAACTCG+TGG 0.559012 1_3:+26843027 None:intergenic
AGGCACGTTATTCATTTGCA+AGG 0.560334 1_3:-26842564 Msa0112290:CDS
TTGACTAATGAGGTAGTGAA+AGG 0.560509 1_3:+26843573 None:intergenic
AGATGACGATGCAGCAGCAA+CGG 0.560811 1_3:+26841997 None:intergenic
TAAGCCGGCAATAATTAAGT+AGG 0.560984 1_3:+26842888 None:intergenic
CTAAAATAATATGAGACAGA+GGG 0.564375 1_3:+26841619 None:intergenic
TTCATTTGCAAGGTTTAAAG+GGG 0.564937 1_3:-26842554 Msa0112290:CDS
GTTGTGGGATATCCTCTTGG+AGG 0.566876 1_3:-26845914 Msa0112290:CDS
TGACCTTCATCAATATGAAA+GGG 0.569231 1_3:+26842916 None:intergenic
TTGTTTGAAGGATTCTGTAA+CGG 0.572193 1_3:-26845936 Msa0112290:intron
GGTAGACTCCAAGGATCAGC+AGG 0.572458 1_3:-26849941 Msa0112290:intron
GGACTTTGTGGTAGACTCCA+AGG 0.572501 1_3:-26849950 Msa0112290:CDS
GTTGGAGCTCTCATCAAAAG+AGG 0.572525 1_3:-26850031 Msa0112290:CDS
AAAGTCCAGCAACAGTATGA+GGG 0.576815 1_3:-26841725 Msa0112290:three_prime_UTR
CAGGTTAAAGTCAAGAGAAG+AGG 0.577823 1_3:-26847890 Msa0112290:CDS
AGCTTTGATGATATACGTGT+TGG 0.579456 1_3:-26843637 Msa0112290:CDS
TTTGAAACTACAGTCTAATG+AGG 0.579854 1_3:-26844272 Msa0112290:intron
TCACCTTCACAACAGCATTG+AGG 0.583189 1_3:+26849044 None:intergenic
TTTCCTCAATGCTGTTGTGA+AGG 0.584051 1_3:-26849047 Msa0112290:intron
TTGTAAGAGTCACTCCTATG+TGG 0.586674 1_3:+26841438 None:intergenic
GAAATGAAGGGTCTCTGTGT+AGG 0.590316 1_3:+26850318 None:intergenic
AGACACAATTTCAGTGACAA+AGG 0.591490 1_3:-26845891 Msa0112290:CDS
TTTGCTTTCAGTAGAAAGCG+AGG 0.591776 1_3:-26846791 Msa0112290:CDS
TTGGCAAATGAGCTCAACAT+AGG 0.592406 1_3:-26842337 Msa0112290:CDS
CACATACCAAATGAACTCGT+GGG 0.593146 1_3:+26843028 None:intergenic
TCAGCTAAAGTTATTGGCAA+AGG 0.593749 1_3:-26842584 Msa0112290:intron
TGCAAATAATGTATTAAAGG+AGG 0.597855 1_3:-26843760 Msa0112290:intron
AAGGTCTACTGGAGGGAATG+TGG 0.599448 1_3:-26850007 Msa0112290:CDS
AGCTCTCATCAAAAGAGGAA+AGG 0.599990 1_3:-26850026 Msa0112290:CDS
AAGAGGAAAGGTCTACTGGA+GGG 0.601207 1_3:-26850014 Msa0112290:CDS
TGTATAAGTACTCCAAGACA+AGG 0.607018 1_3:+26844325 None:intergenic
AAGAGGTGTGAACACTAAGC+CGG 0.608861 1_3:+26842873 None:intergenic
AGGGGATGACTCGAAATATG+TGG 0.616639 1_3:-26847870 Msa0112290:CDS
GCAACATGAAATTATTCATG+TGG 0.623393 1_3:+26841687 None:intergenic
CAAAGCTAAATCACAACCAA+CGG 0.623701 1_3:+26846810 None:intergenic
AGGCAATTCTCTCATTTGAG+CGG 0.624954 1_3:+26843593 None:intergenic
AGATACTAGAAGGTGTGAAG+AGG 0.627683 1_3:-26850528 Msa0112290:five_prime_UTR
GGAACGTGAAGATTGTATAG+GGG 0.629382 1_3:-26842701 Msa0112290:intron
GATATACGTGTTGGATGTGA+AGG 0.631547 1_3:-26843628 Msa0112290:CDS
CCGGCAATAATTAAGTAGGA+AGG 0.633784 1_3:+26842892 None:intergenic
GGGAGTTGTATCTCGTGTAG+AGG 0.638533 1_3:-26845870 Msa0112290:intron
GGGGAAATAATAATCCACAT+AGG 0.638941 1_3:-26841452 Msa0112290:three_prime_UTR
AAGTCCAGCAACAGTATGAG+GGG 0.641776 1_3:-26841724 Msa0112290:three_prime_UTR
GAAATTGTGTCTCCTCCAAG+AGG 0.643687 1_3:+26845902 None:intergenic
CTGCAATGAATAGAAATGAA+GGG 0.646164 1_3:+26850306 None:intergenic
AAAGAGGAAAGGTCTACTGG+AGG 0.649604 1_3:-26850015 Msa0112290:CDS
TCAAGGAGAGTGCATTGGGG+TGG 0.650646 1_3:-26845490 Msa0112290:CDS
CAGAATTAGAAGAAGGAGTG+CGG 0.665220 1_3:+26850283 None:intergenic
GTATAAGTACTCCAAGACAA+GGG 0.666945 1_3:+26844326 None:intergenic
GAACTTGGTATCGTTAGAGG+CGG 0.672790 1_3:-26843081 Msa0112290:CDS
TTGCCATCTGAAAATGCTTG+AGG 0.678842 1_3:-26841668 Msa0112290:three_prime_UTR
GAGTGTGTCTACGTGAGTAG+CGG 0.691186 1_3:+26850346 None:intergenic
ATGCCCAGAGCAATCCGTCG+TGG 0.693119 1_3:+26841837 None:intergenic
CGATCAAGGAGAGTGCATTG+GGG 0.714890 1_3:-26845493 Msa0112290:CDS
GGTTAAAGTCAAGAGAAGAG+GGG 0.719322 1_3:-26847888 Msa0112290:CDS
TGAGTAGCGGAATTTGACAG+TGG 0.725425 1_3:+26850359 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTTAAAAAAAATTTAT+TGG + chr1_3:26844947-26844966 None:intergenic 0.0%
!!! ATTTTTATTTTTTATTTTTT+TGG - chr1_3:26849098-26849117 Msa0112290:intron 0.0%
!!! TTTTTATTTTTTATTTTTTT+GGG - chr1_3:26849099-26849118 Msa0112290:intron 0.0%
!!! AATGATTTTATTTTAATTTC+AGG - chr1_3:26842798-26842817 Msa0112290:intron 10.0%
!!! ATGATTTTATTTTAATTTCA+GGG - chr1_3:26842799-26842818 Msa0112290:intron 10.0%
!!! ATTCAATTGTTATATTTTTT+GGG - chr1_3:26843975-26843994 Msa0112290:intron 10.0%
!!! TTTATTTTTTATTTTTTTGG+GGG - chr1_3:26849101-26849120 Msa0112290:intron 10.0%
!! ATAAATAATAATTCATCAAA+AGG + chr1_3:26849146-26849165 None:intergenic 10.0%
!!! AACAAAAAAAAGTGAATTTT+GGG + chr1_3:26841703-26841722 None:intergenic 15.0%
!!! AAACAAAAAAAAGTGAATTT+TGG + chr1_3:26841704-26841723 None:intergenic 15.0%
!! TATATATTATCAAATTGACA+TGG - chr1_3:26842023-26842042 Msa0112290:CDS 15.0%
!! TAAAATAAAATCATTTGAAG+AGG + chr1_3:26842793-26842812 None:intergenic 15.0%
!!! ATTTTTAAAGTTCTTAGAAT+CGG - chr1_3:26843638-26843657 Msa0112290:CDS 15.0%
!! TTTCATATATATGATTCATT+TGG + chr1_3:26843667-26843686 None:intergenic 15.0%
!!! ATAAAGTTTAAAGTCTTATT+GGG + chr1_3:26843883-26843902 None:intergenic 15.0%
!!! TATAAAGTTTAAAGTCTTAT+TGG + chr1_3:26843884-26843903 None:intergenic 15.0%
!! ACTTTATTCATTTAATTGTA+AGG - chr1_3:26843926-26843945 Msa0112290:intron 15.0%
!!! GATTCAATTGTTATATTTTT+TGG - chr1_3:26843974-26843993 Msa0112290:intron 15.0%
!!! TTCAATTGTTATATTTTTTG+GGG - chr1_3:26843976-26843995 Msa0112290:intron 15.0%
!! AAAATAAATCAGCAATTATT+TGG + chr1_3:26845790-26845809 None:intergenic 15.0%
!!! AAATAATTGCTGATTTATTT+TGG - chr1_3:26845789-26845808 Msa0112290:intron 15.0%
!!! TTTTGTAAGAAAATTTAAAC+AGG + chr1_3:26845935-26845954 None:intergenic 15.0%
!! AATAATTTCTTACTTCTTTA+TGG - chr1_3:26846299-26846318 Msa0112290:intron 15.0%
!! ATAATTTCTTACTTCTTTAT+GGG - chr1_3:26846300-26846319 Msa0112290:intron 15.0%
!!! GACTATTTTTTTTTAAAACT+CGG - chr1_3:26846582-26846601 Msa0112290:intron 15.0%
!! ATTCTATTAGTTAAGAAATA+TGG - chr1_3:26846719-26846738 Msa0112290:intron 15.0%
!! TTAAGAAATATGGTATTTAA+GGG - chr1_3:26846729-26846748 Msa0112290:intron 15.0%
!! TATTAATTGTTGAAGTTATT+GGG + chr1_3:26848036-26848055 None:intergenic 15.0%
!! TTATTAATTGTTGAAGTTAT+TGG + chr1_3:26848037-26848056 None:intergenic 15.0%
!!! CTTCATGATATTTTTATATA+AGG + chr1_3:26848694-26848713 None:intergenic 15.0%
!! TTGCATTTATTCTTTATATA+TGG - chr1_3:26849068-26849087 Msa0112290:CDS 15.0%
!!! TTATTTTTTATTTTTTTGGG+GGG - chr1_3:26849102-26849121 Msa0112290:intron 15.0%
!!! AATTTTGTTTTACTTCTTTT+CGG - chr1_3:26849525-26849544 Msa0112290:intron 15.0%
!!! ATAAAAAGTAATTTGTAAGC+AGG + chr1_3:26842894-26842913 None:intergenic 20.0%
!! ACTATATGAAGTTAAAGATA+TGG + chr1_3:26843261-26843280 None:intergenic 20.0%
!! ATATGAAATTTCCAACTAAA+AGG - chr1_3:26843679-26843698 Msa0112290:intron 20.0%
!! ATTGAAGAAAATCAAAATCA+TGG - chr1_3:26843735-26843754 Msa0112290:intron 20.0%
!!! TAGTTACATAAATTGATAAC+AGG - chr1_3:26843780-26843799 Msa0112290:CDS 20.0%
!! ACTATTATGTTATCATACTT+TGG - chr1_3:26844096-26844115 Msa0112290:intron 20.0%
!! CTATTATGTTATCATACTTT+GGG - chr1_3:26844097-26844116 Msa0112290:intron 20.0%
!!! AAGAGAAAATTGATTTCTAT+AGG - chr1_3:26844247-26844266 Msa0112290:intron 20.0%
!!! AGAGAAAATTGATTTCTATA+GGG - chr1_3:26844248-26844267 Msa0112290:intron 20.0%
!! GACTTTCAATATAAGTTTAT+GGG - chr1_3:26844416-26844435 Msa0112290:intron 20.0%
!! ATATCATCATAAATCAAAAC+AGG + chr1_3:26844575-26844594 None:intergenic 20.0%
!!! TGTTTTGATTTATGATGATA+TGG - chr1_3:26844574-26844593 Msa0112290:intron 20.0%
!!! AAAATCTGATTTTATATCCT+AGG + chr1_3:26844730-26844749 None:intergenic 20.0%
!! TGAAATATGAAATATTGCTT+GGG + chr1_3:26844883-26844902 None:intergenic 20.0%
!! ATGAAATATGAAATATTGCT+TGG + chr1_3:26844884-26844903 None:intergenic 20.0%
!!! TTAAGTGTTTAAAATTGGTT+AGG - chr1_3:26845426-26845445 Msa0112290:intron 20.0%
!! ACTATTTCAAATAAAGGATA+TGG + chr1_3:26845562-26845581 None:intergenic 20.0%
!! TTATTGAAACAACATAATCT+TGG + chr1_3:26845835-26845854 None:intergenic 20.0%
!! TGCTAGAAATAGTATTTAAT+TGG - chr1_3:26845870-26845889 Msa0112290:intron 20.0%
!!! TACAAAATACTTTTGTTTGA+AGG - chr1_3:26845948-26845967 Msa0112290:intron 20.0%
!! TAAGAAATTATTTCAATGCT+GGG + chr1_3:26846291-26846310 None:intergenic 20.0%
!! GTTAAGAAATATGGTATTTA+AGG - chr1_3:26846728-26846747 Msa0112290:intron 20.0%
!! TAATTATCATTTGTATGACT+CGG - chr1_3:26847170-26847189 Msa0112290:intron 20.0%
!! AAATAGCGTATGATATTATT+AGG + chr1_3:26847752-26847771 None:intergenic 20.0%
!! TGATGCAAATAATGTATTAA+AGG - chr1_3:26848133-26848152 Msa0112290:intron 20.0%
!!! TTATCTAAAATGTTAATTCC+TGG + chr1_3:26848209-26848228 None:intergenic 20.0%
!! TATAAAAATATCATGAAGCA+AGG - chr1_3:26848696-26848715 Msa0112290:intron 20.0%
!!! CATTTGACATTTGATTTTAT+GGG - chr1_3:26848726-26848745 Msa0112290:intron 20.0%
!!! GCAAAAAAAAATTTTCTTCA+AGG - chr1_3:26848955-26848974 Msa0112290:intron 20.0%
!! AATAATAATTCATCAAAAGG+AGG + chr1_3:26849143-26849162 None:intergenic 20.0%
!! TTGCAGATTATAAAATTCAA+CGG - chr1_3:26849679-26849698 Msa0112290:intron 20.0%
!!! ATATTATTTTAGAGAAGAGA+CGG - chr1_3:26850288-26850307 Msa0112290:CDS 20.0%
! TTCAAACATAAGATACTAGA+AGG - chr1_3:26841358-26841377 Msa0112290:three_prime_UTR 25.0%
!!! TAACTTATGTTTTTTCTCTG+TGG - chr1_3:26841764-26841783 Msa0112290:three_prime_UTR 25.0%
! TAAGTCTTCAAGGAAAAATA+AGG - chr1_3:26841925-26841944 Msa0112290:CDS 25.0%
! AGAGATTTAATTACTGATGA+AGG - chr1_3:26842149-26842168 Msa0112290:intron 25.0%
! GAGATTTAATTACTGATGAA+GGG - chr1_3:26842150-26842169 Msa0112290:intron 25.0%
!!! CTAACTTGTTCTAATGTAAT+AGG + chr1_3:26842269-26842288 None:intergenic 25.0%
! CTATTACATTAGAACAAGTT+AGG - chr1_3:26842267-26842286 Msa0112290:intron 25.0%
! ATTAGAACAAGTTAGGTTTA+GGG - chr1_3:26842274-26842293 Msa0112290:intron 25.0%
!!! CTACTTTTAACTCAATTATC+AGG + chr1_3:26842389-26842408 None:intergenic 25.0%
! TATCAATTGTTTGAAGATAG+AGG + chr1_3:26842523-26842542 None:intergenic 25.0%
!!! AACTTTTTTACAAGCCTTTA+TGG - chr1_3:26842560-26842579 Msa0112290:CDS 25.0%
!!! ACTTTTTTACAAGCCTTTAT+GGG - chr1_3:26842561-26842580 Msa0112290:CDS 25.0%
!!! GTACAAGAACTTATTTTACA+AGG - chr1_3:26842690-26842709 Msa0112290:intron 25.0%
!!! AAGAACTTATTTTACAAGGT+TGG - chr1_3:26842694-26842713 Msa0112290:intron 25.0%
!! ATCAAGTGTTTTACAAGATT+CGG - chr1_3:26842825-26842844 Msa0112290:intron 25.0%
! ATAAAGGAAATATTTGCGTT+TGG + chr1_3:26842960-26842979 None:intergenic 25.0%
! ATTTCCTGAATTAAACTAAC+AGG - chr1_3:26843483-26843502 Msa0112290:intron 25.0%
! TACAGAAGAAATTAGAATTC+AGG + chr1_3:26843595-26843614 None:intergenic 25.0%
! ATTTATCCTCAGTAGTATAT+GGG - chr1_3:26844167-26844186 Msa0112290:intron 25.0%
! GGGTAAAAATAGGTTATAAA+TGG - chr1_3:26844340-26844359 Msa0112290:intron 25.0%
! GGACTTTCAATATAAGTTTA+TGG - chr1_3:26844415-26844434 Msa0112290:intron 25.0%
!! AATCTAAGATACTTAAAGCT+TGG - chr1_3:26844696-26844715 Msa0112290:intron 25.0%
! TTGACAATTGTATACTTGTT+TGG + chr1_3:26844974-26844993 None:intergenic 25.0%
!! GGCTATTAAGTGTTTAAAAT+TGG - chr1_3:26845421-26845440 Msa0112290:intron 25.0%
! ATAAAGGATATGGAATCTTT+AGG + chr1_3:26845552-26845571 None:intergenic 25.0%
! ACGGAAACTATTTCAAATAA+AGG + chr1_3:26845568-26845587 None:intergenic 25.0%
! ATAATAGCTAAACTATCTGA+CGG + chr1_3:26845587-26845606 None:intergenic 25.0%
! AATTATTTGGTAAGTAGAAG+TGG + chr1_3:26845777-26845796 None:intergenic 25.0%
! GTAAGAAATTATTTCAATGC+TGG + chr1_3:26846292-26846311 None:intergenic 25.0%
!!! ACTCACACTTGTTAAATTTT+AGG - chr1_3:26846356-26846375 Msa0112290:intron 25.0%
!! TGTTAAATTTTAGGCAATAG+CGG - chr1_3:26846365-26846384 Msa0112290:intron 25.0%
! TTGATGTATTAATGCTTACT+TGG - chr1_3:26846461-26846480 Msa0112290:intron 25.0%
!!! ACAAGATTATTTTAGTGTCT+AGG + chr1_3:26846552-26846571 None:intergenic 25.0%
! AGACACTAAAATAATCTTGT+TGG - chr1_3:26846552-26846571 Msa0112290:intron 25.0%
! ACTAAAATAATCTTGTTGGA+AGG - chr1_3:26846556-26846575 Msa0112290:intron 25.0%
!!! TTTTTTTAAAACTCGGTATC+CGG - chr1_3:26846589-26846608 Msa0112290:intron 25.0%
!! ACCTAACAATTTGAACTTTT+GGG - chr1_3:26846880-26846899 Msa0112290:intron 25.0%
! AATGTTTGATCAGTTAAAAC+AGG + chr1_3:26846929-26846948 None:intergenic 25.0%
! TATTCTGGATCATTTACTTA+AGG - chr1_3:26846965-26846984 Msa0112290:intron 25.0%
! ATTCTGGATCATTTACTTAA+GGG - chr1_3:26846966-26846985 Msa0112290:intron 25.0%
!! TTATCAGTAACACATTTTTC+TGG + chr1_3:26847198-26847217 None:intergenic 25.0%
! ACATTTATGCTGATATAAGA+CGG - chr1_3:26847252-26847271 Msa0112290:intron 25.0%
!!! TTAAGAAATTGGCTTGTAAA+AGG + chr1_3:26847301-26847320 None:intergenic 25.0%
!!! ATTTTAGGTGGTTAAGAAAT+TGG + chr1_3:26847312-26847331 None:intergenic 25.0%
!! ACATTAAGAACAATTTTAGG+TGG + chr1_3:26847324-26847343 None:intergenic 25.0%
!! CACACATTAAGAACAATTTT+AGG + chr1_3:26847327-26847346 None:intergenic 25.0%
!! GTTTGCATATTAAGCTTTTT+AGG + chr1_3:26847510-26847529 None:intergenic 25.0%
! CAATACCTACTTCATAAATA+TGG - chr1_3:26847861-26847880 Msa0112290:intron 25.0%
! AAACTCCATATTTATGAAGT+AGG + chr1_3:26847869-26847888 None:intergenic 25.0%
! ATAACAAAACTTCACTGATA+TGG + chr1_3:26847970-26847989 None:intergenic 25.0%
! TGCAAATAATGTATTAAAGG+AGG - chr1_3:26848136-26848155 Msa0112290:intron 25.0%
! AATTTCTACATGAAATTGTG+TGG - chr1_3:26848555-26848574 Msa0112290:intron 25.0%
! ATTTCTACATGAAATTGTGT+GGG - chr1_3:26848556-26848575 Msa0112290:intron 25.0%
!! TAATACTTCACTATCGTTTT+TGG - chr1_3:26848590-26848609 Msa0112290:intron 25.0%
!! AAAACGAATTTTTCTTTTGC+AGG + chr1_3:26848625-26848644 None:intergenic 25.0%
!!! GCATTTGACATTTGATTTTA+TGG - chr1_3:26848725-26848744 Msa0112290:intron 25.0%
! TGTATAACATTGTCATTCTA+GGG + chr1_3:26848775-26848794 None:intergenic 25.0%
!! TGTGATTTGTCATAGAAATT+TGG - chr1_3:26848887-26848906 Msa0112290:intron 25.0%
!! TTAATTATGGAACTTTTGAC+AGG - chr1_3:26849170-26849189 Msa0112290:intron 25.0%
!! TAATTATGGAACTTTTGACA+GGG - chr1_3:26849171-26849190 Msa0112290:intron 25.0%
! TATTCATTTGCAAGGTTTAA+AGG - chr1_3:26849340-26849359 Msa0112290:intron 25.0%
! ATTCATTTGCAAGGTTTAAA+GGG - chr1_3:26849341-26849360 Msa0112290:intron 25.0%
! TGTTTGATTGTATGATGTAT+AGG - chr1_3:26849429-26849448 Msa0112290:intron 25.0%
! GCAAAATGATATGATATTGT+TGG + chr1_3:26849466-26849485 None:intergenic 25.0%
!! CAACTTCAAAATTTGAAACT+GGG + chr1_3:26850038-26850057 None:intergenic 25.0%
! CTAAAATAATATGAGACAGA+GGG + chr1_3:26850280-26850299 None:intergenic 25.0%
!! TCTAAAATAATATGAGACAG+AGG + chr1_3:26850281-26850300 None:intergenic 25.0%
!!! TATTATTTTAGAGAAGAGAC+GGG - chr1_3:26850289-26850308 Msa0112290:CDS 25.0%
!! TTATCGCATATTCTGTATTT+TGG - chr1_3:26850422-26850441 Msa0112290:exon 25.0%
!! TATCGCATATTCTGTATTTT+GGG - chr1_3:26850423-26850442 Msa0112290:exon 25.0%
!!! CTCTGTTTTTGTAGTGAAAA+TGG - chr1_3:26841466-26841485 Msa0112290:three_prime_UTR 30.0%
CTGCAATGAATAGAAATGAA+GGG + chr1_3:26841593-26841612 None:intergenic 30.0%
!! TTTACCTGTCCTTTGAAATT+GGG + chr1_3:26841641-26841660 None:intergenic 30.0%
!! ATTTACCTGTCCTTTGAAAT+TGG + chr1_3:26841642-26841661 None:intergenic 30.0%
AAGTTCAAAAACAAAGTGAG+AGG + chr1_3:26841676-26841695 None:intergenic 30.0%
AAGGAAAAATAAGGACTTTG+TGG - chr1_3:26841934-26841953 Msa0112290:CDS 30.0%
!! GAAATATGGAAGTGTTATTG+TGG - chr1_3:26842100-26842119 Msa0112290:intron 30.0%
CATTAGAACAAGTTAGGTTT+AGG - chr1_3:26842273-26842292 Msa0112290:intron 30.0%
CAATTGATATAGAGCTAGTT+TGG - chr1_3:26842534-26842553 Msa0112290:CDS 30.0%
!!! CTTTTTTACAAGCCTTTATG+GGG - chr1_3:26842562-26842581 Msa0112290:CDS 30.0%
!!! TTTTTTACAAGCCTTTATGG+GGG - chr1_3:26842563-26842582 Msa0112290:CDS 30.0%
CTTACAAAGATTTAGTTGAC+GGG + chr1_3:26842659-26842678 None:intergenic 30.0%
GCTTACAAAGATTTAGTTGA+CGG + chr1_3:26842660-26842679 None:intergenic 30.0%
AATAAGTTCTTGTACGTGTA+TGG + chr1_3:26842685-26842704 None:intergenic 30.0%
!!! GAAAGAATCATTTTGGCTTA+TGG + chr1_3:26842750-26842769 None:intergenic 30.0%
! GCAAAGAGAAAGAATCATTT+TGG + chr1_3:26842757-26842776 None:intergenic 30.0%
TAAAATCATTTGAAGAGGCA+AGG + chr1_3:26842788-26842807 None:intergenic 30.0%
AGTGAATGATGATCAGATAT+GGG + chr1_3:26843113-26843132 None:intergenic 30.0%
AAGTGAATGATGATCAGATA+TGG + chr1_3:26843114-26843133 None:intergenic 30.0%
! GAAGAAGAGATACAGTTTTA+AGG + chr1_3:26843144-26843163 None:intergenic 30.0%
ACTCTTGTCTATAATGCATA+TGG - chr1_3:26843174-26843193 Msa0112290:intron 30.0%
!!! CATATGGTTTCACTTTTTAC+AGG - chr1_3:26843190-26843209 Msa0112290:intron 30.0%
! GAAGAAGAGATACAGTTTTA+AGG + chr1_3:26843144-26843163 None:intergenic 30.0%
TGAATACCATAACTGCATAA+TGG - chr1_3:26843449-26843468 Msa0112290:intron 30.0%
TTCATACCATTATGCAGTTA+TGG + chr1_3:26843458-26843477 None:intergenic 30.0%
!! AGGGATTTGTTGTGTTAATA+AGG - chr1_3:26843813-26843832 Msa0112290:intron 30.0%
!! GGGATTTGTTGTGTTAATAA+GGG - chr1_3:26843814-26843833 Msa0112290:intron 30.0%
CCTTACATTTCATTACACAT+CGG + chr1_3:26843953-26843972 None:intergenic 30.0%
!!! TATTTTTTGGGGATAATTGC+AGG - chr1_3:26843987-26844006 Msa0112290:intron 30.0%
CATTTATCCTCAGTAGTATA+TGG - chr1_3:26844166-26844185 Msa0112290:intron 30.0%
!!! AACCTATTTTTACCCATTCA+TGG + chr1_3:26844335-26844354 None:intergenic 30.0%
ATGGGAGATTATTGTAATTC+AGG - chr1_3:26844434-26844453 Msa0112290:intron 30.0%
! TTCAAAGAAATTAGTTCTCC+TGG - chr1_3:26844526-26844545 Msa0112290:intron 30.0%
! TCAAAGAAATTAGTTCTCCT+GGG - chr1_3:26844527-26844546 Msa0112290:intron 30.0%
! CAAGTTATGCTTTGAACATA+TGG - chr1_3:26844618-26844637 Msa0112290:intron 30.0%
GGATTAATGTCCATATTACT+TGG + chr1_3:26844668-26844687 None:intergenic 30.0%
AGTATCTTAGATTAACTCGT+AGG + chr1_3:26844689-26844708 None:intergenic 30.0%
ATATACGTTATTCTCACTGA+TGG - chr1_3:26845041-26845060 Msa0112290:intron 30.0%
!!! TAGTTTTAAACCTGAAGAAC+TGG + chr1_3:26845172-26845191 None:intergenic 30.0%
TTGGATGGATGTATATAGTT+AGG - chr1_3:26845331-26845350 Msa0112290:intron 30.0%
TGGATGGATGTATATAGTTA+GGG - chr1_3:26845332-26845351 Msa0112290:intron 30.0%
AATTGTAATCCCTAACGATT+AGG + chr1_3:26845620-26845639 None:intergenic 30.0%
CTGTTCAACTATATATGCAT+GGG + chr1_3:26845649-26845668 None:intergenic 30.0%
TCTGTTCAACTATATATGCA+TGG + chr1_3:26845650-26845669 None:intergenic 30.0%
! GCATTTTCAGTTAGTTCATA+TGG - chr1_3:26845710-26845729 Msa0112290:intron 30.0%
! AACAACATAATCTTGGTAGT+TGG + chr1_3:26845828-26845847 None:intergenic 30.0%
TTGTTTGAAGGATTCTGTAA+CGG - chr1_3:26845960-26845979 Msa0112290:intron 30.0%
GCTGAATAAAAATTGTAACC+AGG - chr1_3:26846106-26846125 Msa0112290:intron 30.0%
! CACTTTTAGATATACTTACC+AGG + chr1_3:26846194-26846213 None:intergenic 30.0%
CTGGTAAGTATATCTAAAAG+TGG - chr1_3:26846192-26846211 Msa0112290:intron 30.0%
ATAAACAGAGAAAATCAGAG+AGG + chr1_3:26846238-26846257 None:intergenic 30.0%
TTAATACATCAACTAACAGC+AGG + chr1_3:26846453-26846472 None:intergenic 30.0%
CATGTATACTTATGTGTGAA+AGG - chr1_3:26846484-26846503 Msa0112290:intron 30.0%
TACCTTGTGCTTAAAAAATG+TGG + chr1_3:26846764-26846783 None:intergenic 30.0%
!!! ACATTTTTTAAGCACAAGGT+AGG - chr1_3:26846763-26846782 Msa0112290:CDS 30.0%
!!! CATTTTTTAAGCACAAGGTA+GGG - chr1_3:26846764-26846783 Msa0112290:CDS 30.0%
!!! ATTTTTTAAGCACAAGGTAG+GGG - chr1_3:26846765-26846784 Msa0112290:CDS 30.0%
! CACCTAACAATTTGAACTTT+TGG - chr1_3:26846879-26846898 Msa0112290:intron 30.0%
! CCTAACAATTTGAACTTTTG+GGG - chr1_3:26846881-26846900 Msa0112290:intron 30.0%
! CTAACAATTTGAACTTTTGG+GGG - chr1_3:26846882-26846901 Msa0112290:intron 30.0%
TCAGTTAAAACAGGATTATC+TGG + chr1_3:26846920-26846939 None:intergenic 30.0%
!! CATTACGTTGTTTTCTATTC+TGG - chr1_3:26846950-26846969 Msa0112290:intron 30.0%
AAATGAGATACAACTGTTGA+TGG + chr1_3:26847047-26847066 None:intergenic 30.0%
TACTGGTAAGAAATGTTAAC+TGG - chr1_3:26847097-26847116 Msa0112290:intron 30.0%
CATTTATGCTGATATAAGAC+GGG - chr1_3:26847253-26847272 Msa0112290:intron 30.0%
ATTTATGCTGATATAAGACG+GGG - chr1_3:26847254-26847273 Msa0112290:intron 30.0%
! TGTATTGGCATAACAGAAAT+TGG + chr1_3:26847377-26847396 None:intergenic 30.0%
GATCAACAGATTCAATGTAT+TGG + chr1_3:26847392-26847411 None:intergenic 30.0%
!! TGCATATTAAGCTTTTTAGG+AGG + chr1_3:26847507-26847526 None:intergenic 30.0%
! AAAACTATGTTTTCACTCCT+AGG - chr1_3:26847544-26847563 Msa0112290:intron 30.0%
! TTTGAAACTACAGTCTAATG+AGG - chr1_3:26847624-26847643 Msa0112290:intron 30.0%
GAGATTATTTGTTTGAACAC+TGG - chr1_3:26847660-26847679 Msa0112290:intron 30.0%
AAGTTATTGGGTTTGAGTAA+GGG + chr1_3:26848024-26848043 None:intergenic 30.0%
ACATTATTTGCATCAGAAGT+TGG + chr1_3:26848128-26848147 None:intergenic 30.0%
ATTGTTGAATGTGAATTCTG+AGG - chr1_3:26848166-26848185 Msa0112290:intron 30.0%
ATGTTAATTCCTGGTACAAT+GGG + chr1_3:26848200-26848219 None:intergenic 30.0%
AATGTTAATTCCTGGTACAA+TGG + chr1_3:26848201-26848220 None:intergenic 30.0%
TAGATAAATCTTGCCATTAC+AGG - chr1_3:26848222-26848241 Msa0112290:intron 30.0%
AGATAAATCTTGCCATTACA+GGG - chr1_3:26848223-26848242 Msa0112290:intron 30.0%
! AACACATATTGCAAAAGCAT+TGG + chr1_3:26848531-26848550 None:intergenic 30.0%
TTTCTACATGAAATTGTGTG+GGG - chr1_3:26848557-26848576 Msa0112290:intron 30.0%
!! ACTATCGTTTTTGGAAACTA+GGG - chr1_3:26848599-26848618 Msa0112290:intron 30.0%
ACTCTTATATGTTTGCTTTG+TGG - chr1_3:26848656-26848675 Msa0112290:intron 30.0%
TTCCATCCTAAGGATATAAA+TGG + chr1_3:26848752-26848771 None:intergenic 30.0%
CTGTATAACATTGTCATTCT+AGG + chr1_3:26848776-26848795 None:intergenic 30.0%
ACAATGTTATACAGATTTGC+AGG - chr1_3:26848782-26848801 Msa0112290:intron 30.0%
TGACCTTCATCAATATGAAA+GGG + chr1_3:26848983-26849002 None:intergenic 30.0%
AATGCAACATACTCAATCAA+TGG + chr1_3:26849055-26849074 None:intergenic 30.0%
!!! TTTTTTATTTTTTTGGGGGG+TGG - chr1_3:26849105-26849124 Msa0112290:intron 30.0%
!!! TTTTTATTTTTTTGGGGGGT+GGG - chr1_3:26849106-26849125 Msa0112290:intron 30.0%
TCATGATCAGCTAAAGTTAT+TGG - chr1_3:26849306-26849325 Msa0112290:intron 30.0%
TTCATTTGCAAGGTTTAAAG+GGG - chr1_3:26849342-26849361 Msa0112290:intron 30.0%
ACAAATTGTAATTCTCTCAC+AGG - chr1_3:26849366-26849385 Msa0112290:intron 30.0%
AAAAGAAAATGATCGCACAA+TGG + chr1_3:26849771-26849790 None:intergenic 30.0%
! CCAACTTCAAAATTTGAAAC+TGG + chr1_3:26850039-26850058 None:intergenic 30.0%
!!! CCAGTTTCAAATTTTGAAGT+TGG - chr1_3:26850036-26850055 Msa0112290:CDS 30.0%
! AAGCATATGGTCACAATTTT+TGG - chr1_3:26850142-26850161 Msa0112290:intron 30.0%
GCAACATGAAATTATTCATG+TGG + chr1_3:26850212-26850231 None:intergenic 30.0%
! ACTCCTTGATTTGATAAACT+TGG - chr1_3:26850369-26850388 Msa0112290:CDS 30.0%
CTTCCAAGTTTATCAAATCA+AGG + chr1_3:26850375-26850394 None:intergenic 30.0%
! ATCGCATATTCTGTATTTTG+GGG - chr1_3:26850424-26850443 Msa0112290:exon 30.0%
AGAAGATAACACAGAGAACA+TGG + chr1_3:26841516-26841535 None:intergenic 35.0%
GCTGCAATGAATAGAAATGA+AGG + chr1_3:26841594-26841613 None:intergenic 35.0%
AATTCTGACCCCAATTTCAA+AGG - chr1_3:26841629-26841648 Msa0112290:three_prime_UTR 35.0%
!! TTACCTGTCCTTTGAAATTG+GGG + chr1_3:26841640-26841659 None:intergenic 35.0%
GTTGATGTTTCAGAATTCGT+TGG - chr1_3:26841847-26841866 Msa0112290:CDS 35.0%
CTTGAAGACTTAAAAGAAGC+TGG + chr1_3:26841917-26841936 None:intergenic 35.0%
!! CAGCTTCTTTTAAGTCTTCA+AGG - chr1_3:26841915-26841934 Msa0112290:CDS 35.0%
GTTGCATTTGTCTGGAAATA+TGG - chr1_3:26842086-26842105 Msa0112290:intron 35.0%
! AGGACCTGAGATTATCTTTT+CGG - chr1_3:26842229-26842248 Msa0112290:intron 35.0%
!!! TCTTTTCGGGTCATGTTATT+CGG - chr1_3:26842243-26842262 Msa0112290:intron 35.0%
! TCAACGTCAAGTCACTATTT+TGG - chr1_3:26842322-26842341 Msa0112290:CDS 35.0%
! CAACGTCAAGTCACTATTTT+GGG - chr1_3:26842323-26842342 Msa0112290:CDS 35.0%
TACTCCTATCCAAGGTTATA+AGG + chr1_3:26842496-26842515 None:intergenic 35.0%
! TTTTTACAAGCCTTTATGGG+GGG - chr1_3:26842564-26842583 Msa0112290:CDS 35.0%
!!! AGAATCATTTTGGCTTATGG+CGG + chr1_3:26842747-26842766 None:intergenic 35.0%
!! TTTTGTTTCAGAGACCCTTA+AGG - chr1_3:26842913-26842932 Msa0112290:CDS 35.0%
TTTGTTTCAGAGACCCTTAA+GGG - chr1_3:26842914-26842933 Msa0112290:CDS 35.0%
! GCGTTTGGATTTTGAATTTG+AGG + chr1_3:26842945-26842964 None:intergenic 35.0%
ATAATTGAGGCATGGCATAA+AGG + chr1_3:26842976-26842995 None:intergenic 35.0%
ACAGATGTCAGACATAATTG+AGG + chr1_3:26842989-26843008 None:intergenic 35.0%
GCTGAAAATGTGTATAAGAG+CGG + chr1_3:26843306-26843325 None:intergenic 35.0%
AGTAAACCTAAGGATGAAAC+AGG + chr1_3:26843354-26843373 None:intergenic 35.0%
!!! AATTGTCTCTGTTTTTGCCA+GGG + chr1_3:26843406-26843425 None:intergenic 35.0%
! CTAACTTTCTGCCTTTTAGT+TGG + chr1_3:26843693-26843712 None:intergenic 35.0%
CAACTAAAAGGCAGAAAGTT+AGG - chr1_3:26843691-26843710 Msa0112290:intron 35.0%
! CATAAATTGATAACAGGCAC+TGG - chr1_3:26843786-26843805 Msa0112290:CDS 35.0%
CCGATGTGTAATGAAATGTA+AGG - chr1_3:26843950-26843969 Msa0112290:intron 35.0%
AGGTTAAAGTCAAGAGAAGA+GGG - chr1_3:26844007-26844026 Msa0112290:intron 35.0%
AGCCATGAATGGGTAAAAAT+AGG - chr1_3:26844330-26844349 Msa0112290:CDS 35.0%
GTGACAATAGCCAAGTAATA+TGG - chr1_3:26844655-26844674 Msa0112290:intron 35.0%
CAATAGAAGACTCTTAGACA+TGG - chr1_3:26844991-26845010 Msa0112290:intron 35.0%
CAAAGCTAAATCACAACCAA+CGG + chr1_3:26845089-26845108 None:intergenic 35.0%
GATGTGGAACCTCTTAAATT+TGG - chr1_3:26845139-26845158 Msa0112290:intron 35.0%
TTGTTGAAGTCAAAGTGAAC+TGG - chr1_3:26845277-26845296 Msa0112290:intron 35.0%
TGTTGAAGTCAAAGTGAACT+GGG - chr1_3:26845278-26845297 Msa0112290:intron 35.0%
TGATGTATGAACACTCTCAA+AGG - chr1_3:26845305-26845324 Msa0112290:intron 35.0%
GATGTATGAACACTCTCAAA+GGG - chr1_3:26845306-26845325 Msa0112290:intron 35.0%
ATGGATGTATATAGTTAGGG+TGG - chr1_3:26845335-26845354 Msa0112290:intron 35.0%
! TGCTAGTCGTACTTTCTTTT+TGG - chr1_3:26845400-26845419 Msa0112290:intron 35.0%
!! TCTTTAGGAACGGTGTATTT+TGG + chr1_3:26845537-26845556 None:intergenic 35.0%
! GGATATGGAATCTTTAGGAA+CGG + chr1_3:26845547-26845566 None:intergenic 35.0%
ATGTATTGCTCCTAATCGTT+AGG - chr1_3:26845607-26845626 Msa0112290:intron 35.0%
TGTATTGCTCCTAATCGTTA+GGG - chr1_3:26845608-26845627 Msa0112290:intron 35.0%
TATTTGGTAAGTAGAAGTGG+TGG + chr1_3:26845774-26845793 None:intergenic 35.0%
! CATAATCTTGGTAGTTGGTA+TGG + chr1_3:26845823-26845842 None:intergenic 35.0%
AGACACAATTTCAGTGACAA+AGG - chr1_3:26846005-26846024 Msa0112290:intron 35.0%
GACACAATTTCAGTGACAAA+GGG - chr1_3:26846006-26846025 Msa0112290:intron 35.0%
GCAACTGAGAACTAAAATCT+CGG + chr1_3:26846088-26846107 None:intergenic 35.0%
ATTGATGCAGCAATAAATCC+TGG - chr1_3:26846173-26846192 Msa0112290:intron 35.0%
GAAATTATTTCAATGCTGGG+TGG + chr1_3:26846288-26846307 None:intergenic 35.0%
! TAAATTTTAGGCAATAGCGG+AGG - chr1_3:26846368-26846387 Msa0112290:intron 35.0%
!! GGCATTTCAGGTAGATTTTA+TGG - chr1_3:26846427-26846446 Msa0112290:intron 35.0%
ACAAGTTAAAAGCTATGCTC+TGG + chr1_3:26846686-26846705 None:intergenic 35.0%
!!! CTCCACATTTTTTAAGCACA+AGG - chr1_3:26846759-26846778 Msa0112290:CDS 35.0%
!!! TTTTTTAAGCACAAGGTAGG+GGG - chr1_3:26846766-26846785 Msa0112290:CDS 35.0%
AGTTAACACACTTCTTCACA+CGG + chr1_3:26846826-26846845 None:intergenic 35.0%
GTTAGGTGAAAGATTGTGAA+AGG + chr1_3:26846867-26846886 None:intergenic 35.0%
CCCCAAAAGTTCAAATTGTT+AGG + chr1_3:26846884-26846903 None:intergenic 35.0%
TTAAAACAGGATTATCTGGC+AGG + chr1_3:26846916-26846935 None:intergenic 35.0%
TCTGAAGATGCTGAGAATAT+TGG - chr1_3:26847011-26847030 Msa0112290:intron 35.0%
GAAAAGAATGGCAAGTATAC+TGG - chr1_3:26847080-26847099 Msa0112290:intron 35.0%
TGGTAAGAAATGTTAACTGG+AGG - chr1_3:26847100-26847119 Msa0112290:intron 35.0%
TGTGAATTCTAGCATGTATC+TGG - chr1_3:26847420-26847439 Msa0112290:intron 35.0%
!! ATTAAGCTTTTTAGGAGGCT+TGG + chr1_3:26847502-26847521 None:intergenic 35.0%
GCTTAATATGCAAACTATGC+TGG - chr1_3:26847515-26847534 Msa0112290:intron 35.0%
GTATAAGTACTCCAAGACAA+GGG + chr1_3:26847573-26847592 None:intergenic 35.0%
TGTATAAGTACTCCAAGACA+AGG + chr1_3:26847574-26847593 None:intergenic 35.0%
CTAATGAGGTATGTTATGCA+TGG - chr1_3:26847638-26847657 Msa0112290:intron 35.0%
! AAAGAGAAGTGCACAAGAAA+AGG + chr1_3:26847810-26847829 None:intergenic 35.0%
ATGGTGTATCATGATGAGAT+GGG + chr1_3:26847951-26847970 None:intergenic 35.0%
TATGGTGTATCATGATGAGA+TGG + chr1_3:26847952-26847971 None:intergenic 35.0%
GAAGTTATTGGGTTTGAGTA+AGG + chr1_3:26848025-26848044 None:intergenic 35.0%
! TTTTTCACTCTTTGTCTTGC+AGG - chr1_3:26848079-26848098 Msa0112290:intron 35.0%
! TTTTCACTCTTTGTCTTGCA+GGG - chr1_3:26848080-26848099 Msa0112290:intron 35.0%
! AGCTTTGATGATATACGTGT+TGG - chr1_3:26848259-26848278 Msa0112290:intron 35.0%
TTGACTAATGAGGTAGTGAA+AGG + chr1_3:26848326-26848345 None:intergenic 35.0%
!! GCTCTTACTTTTGACTAATG+AGG + chr1_3:26848336-26848355 None:intergenic 35.0%
!! CACTATCGTTTTTGGAAACT+AGG - chr1_3:26848598-26848617 Msa0112290:intron 35.0%
TATGGGCCATTTATATCCTT+AGG - chr1_3:26848743-26848762 Msa0112290:intron 35.0%
TTTAAACCCACGAGTTCATT+TGG - chr1_3:26848862-26848881 Msa0112290:intron 35.0%
GCATCAGATCAATAGAATCA+TGG + chr1_3:26848925-26848944 None:intergenic 35.0%
GTTCCCTTTCATATTGATGA+AGG - chr1_3:26848977-26848996 Msa0112290:intron 35.0%
CTGACCTTCATCAATATGAA+AGG + chr1_3:26848984-26849003 None:intergenic 35.0%
CCTTCCTACTTAATTATTGC+CGG - chr1_3:26849004-26849023 Msa0112290:intron 35.0%
TAAGCCGGCAATAATTAAGT+AGG + chr1_3:26849011-26849030 None:intergenic 35.0%
!! TCAATCAATGGTTCTGAAAG+AGG + chr1_3:26849043-26849062 None:intergenic 35.0%
!!! TTTTATTTTTTTGGGGGGTG+GGG - chr1_3:26849107-26849126 Msa0112290:intron 35.0%
AGGAACGTGAAGATTGTATA+GGG - chr1_3:26849194-26849213 Msa0112290:intron 35.0%
!! TTTTCCAGCTTTGTGCTTTA+AGG + chr1_3:26849244-26849263 None:intergenic 35.0%
TCAGCTAAAGTTATTGGCAA+AGG - chr1_3:26849312-26849331 Msa0112290:intron 35.0%
ATTGTAATTCTCTCACAGGT+TGG - chr1_3:26849370-26849389 Msa0112290:intron 35.0%
AGATCAGAAGATCTTTCAGA+TGG + chr1_3:26849946-26849965 None:intergenic 35.0%
ACTTCTTGTGAATCCACATA+GGG + chr1_3:26849976-26849995 None:intergenic 35.0%
TACTTCTTGTGAATCCACAT+AGG + chr1_3:26849977-26849996 None:intergenic 35.0%
TGTTAGCGTGAAATTTCTCT+TGG - chr1_3:26850107-26850126 Msa0112290:intron 35.0%
GTGACCATATGCTTCAAATA+TGG + chr1_3:26850136-26850155 None:intergenic 35.0%
!! CATATGGTCACAATTTTTGG+CGG - chr1_3:26850145-26850164 Msa0112290:intron 35.0%
TTATTCATGTGGTCACATCA+AGG + chr1_3:26850201-26850220 None:intergenic 35.0%
!! TCGCATATTCTGTATTTTGG+GGG - chr1_3:26850425-26850444 Msa0112290:exon 35.0%
GGGGAAATAATAATCCACAT+AGG - chr1_3:26850444-26850463 Msa0112290:five_prime_UTR 35.0%
! AGATACTAGAAGGTGTGAAG+AGG - chr1_3:26841368-26841387 Msa0112290:three_prime_UTR 40.0%
CAGAATTAGAAGAAGGAGTG+CGG + chr1_3:26841616-26841635 None:intergenic 40.0%
TTGGGGTCAGAATTAGAAGA+AGG + chr1_3:26841623-26841642 None:intergenic 40.0%
AGCTCTCATCAAAAGAGGAA+AGG - chr1_3:26841870-26841889 Msa0112290:CDS 40.0%
TCAAAAGAGGAAAGGTCTAC+TGG - chr1_3:26841878-26841897 Msa0112290:CDS 40.0%
! ATAAAGTACCTGCTGATCCT+TGG + chr1_3:26841966-26841985 None:intergenic 40.0%
GTGAATGTGTTGCATTTGTC+TGG - chr1_3:26842078-26842097 Msa0112290:intron 40.0%
TTACTGATGAAGGGTTCGTT+TGG - chr1_3:26842159-26842178 Msa0112290:intron 40.0%
!!! GGTTTGTCTGGAGTTTTAAG+GGG + chr1_3:26842202-26842221 None:intergenic 40.0%
!! GGGTTTGTCTGGAGTTTTAA+GGG + chr1_3:26842203-26842222 None:intergenic 40.0%
!! AGGGTTTGTCTGGAGTTTTA+AGG + chr1_3:26842204-26842223 None:intergenic 40.0%
TAATCTCAGGTCCTATCTCA+GGG + chr1_3:26842223-26842242 None:intergenic 40.0%
ATAATCTCAGGTCCTATCTC+AGG + chr1_3:26842224-26842243 None:intergenic 40.0%
! GGACCTGAGATTATCTTTTC+GGG - chr1_3:26842230-26842249 Msa0112290:intron 40.0%
TGACCCGAAAAGATAATCTC+AGG + chr1_3:26842236-26842255 None:intergenic 40.0%
! AACACCGTTGACAGAGTATT+CGG - chr1_3:26842441-26842460 Msa0112290:intron 40.0%
TGAACCGAATACTCTGTCAA+CGG + chr1_3:26842448-26842467 None:intergenic 40.0%
!!! GGTTCAATTTCTAGCGCTTT+TGG - chr1_3:26842462-26842481 Msa0112290:intron 40.0%
CATGCCTTATAACCTTGGAT+AGG - chr1_3:26842489-26842508 Msa0112290:intron 40.0%
! TTTTACAAGCCTTTATGGGG+GGG - chr1_3:26842565-26842584 Msa0112290:CDS 40.0%
GAAATCAACTTATGCACACC+AGG - chr1_3:26842621-26842640 Msa0112290:intron 40.0%
TTTCCTCAATGCTGTTGTGA+AGG - chr1_3:26842849-26842868 Msa0112290:intron 40.0%
! ATTTGAGGTGCAACCCTTAA+GGG + chr1_3:26842930-26842949 None:intergenic 40.0%
! AATTTGAGGTGCAACCCTTA+AGG + chr1_3:26842931-26842950 None:intergenic 40.0%
TGTCAGACATAATTGAGGCA+TGG + chr1_3:26842984-26843003 None:intergenic 40.0%
! GACATCTGTGTTTCTGTTGT+TGG - chr1_3:26843000-26843019 Msa0112290:intron 40.0%
TCTTGTCCTTGAAGCTTTCA+TGG - chr1_3:26843024-26843043 Msa0112290:intron 40.0%
ACAAAGAGAAACTGCGTGTA+AGG + chr1_3:26843331-26843350 None:intergenic 40.0%
CTTTGTCCTGTTTCATCCTT+AGG - chr1_3:26843345-26843364 Msa0112290:intron 40.0%
!!! GAATTGTCTCTGTTTTTGCC+AGG + chr1_3:26843407-26843426 None:intergenic 40.0%
! GTGGCCTGTTAGTTTAATTC+AGG + chr1_3:26843490-26843509 None:intergenic 40.0%
CTTTGCAGTGCGTTTATGAT+TGG - chr1_3:26843513-26843532 Msa0112290:intron 40.0%
!! TGATAACAGGCACTGGATAT+AGG - chr1_3:26843793-26843812 Msa0112290:CDS 40.0%
!! GATAACAGGCACTGGATATA+GGG - chr1_3:26843794-26843813 Msa0112290:CDS 40.0%
CAGGTTAAAGTCAAGAGAAG+AGG - chr1_3:26844006-26844025 Msa0112290:intron 40.0%
GGTTAAAGTCAAGAGAAGAG+GGG - chr1_3:26844008-26844027 Msa0112290:intron 40.0%
TGACTCGAAATATGTGGCTA+AGG - chr1_3:26844032-26844051 Msa0112290:intron 40.0%
CAATACACCTCTATCATGAC+AGG + chr1_3:26844062-26844081 None:intergenic 40.0%
CTTAGCATATCTGACTGAGT+AGG - chr1_3:26844136-26844155 Msa0112290:intron 40.0%
TCTAGTCCCATATACTACTG+AGG + chr1_3:26844176-26844195 None:intergenic 40.0%
AGTGCATGTTAGCCATGAAT+GGG - chr1_3:26844320-26844339 Msa0112290:CDS 40.0%
! AAAGCTTGGAAGTTGATCCT+AGG - chr1_3:26844710-26844729 Msa0112290:intron 40.0%
TGAAATATTGCTTGGGACCT+TGG + chr1_3:26844876-26844895 None:intergenic 40.0%
TTCTCACTGATGGAATGTAC+AGG - chr1_3:26845051-26845070 Msa0112290:intron 40.0%
TTTGCTTTCAGTAGAAAGCG+AGG - chr1_3:26845105-26845124 Msa0112290:intron 40.0%
GGCAAACGTCCAAATTTAAG+AGG + chr1_3:26845151-26845170 None:intergenic 40.0%
! GAGTTTGCTTCTTTCTGCTT+TGG - chr1_3:26845221-26845240 Msa0112290:intron 40.0%
! TCGTCTCTAGTGTCATTGTT+AGG - chr1_3:26845371-26845390 Msa0112290:intron 40.0%
! AAGTAGAAGTGGTGGAGAAT+AGG + chr1_3:26845766-26845785 None:intergenic 40.0%
AAGGATTCTGTAACGGTTGT+GGG - chr1_3:26845967-26845986 Msa0112290:intron 40.0%
CATGAGCATATGATGTAACC+TGG + chr1_3:26846127-26846146 None:intergenic 40.0%
CAGGTTACATCATATGCTCA+TGG - chr1_3:26846125-26846144 Msa0112290:intron 40.0%
AACAGAGAAAATCAGAGAGG+AGG + chr1_3:26846235-26846254 None:intergenic 40.0%
TGGGTGGCAGAAATACTATT+TGG + chr1_3:26846272-26846291 None:intergenic 40.0%
!!! GCTATGCTCTGGCTTTTAAA+TGG + chr1_3:26846675-26846694 None:intergenic 40.0%
!! TTTTTAAGCACAAGGTAGGG+GGG - chr1_3:26846767-26846786 Msa0112290:CDS 40.0%
GTTAACACACTTCTTCACAC+GGG + chr1_3:26846825-26846844 None:intergenic 40.0%
!! ATTTGAACTTTTGGGGGAGT+TGG - chr1_3:26846888-26846907 Msa0112290:intron 40.0%
ACTTAAGGGACAATGCTTCT+AGG - chr1_3:26846980-26846999 Msa0112290:intron 40.0%
CTGACTGACTACGAAAAGAA+TGG - chr1_3:26847068-26847087 Msa0112290:intron 40.0%
AGAAATGTTAACTGGAGGCA+TGG - chr1_3:26847105-26847124 Msa0112290:intron 40.0%
TTGTAAAAGGCAATGTGCAC+AGG + chr1_3:26847288-26847307 None:intergenic 40.0%
TATGTGAATAACAGCCGTTC+TGG + chr1_3:26847698-26847717 None:intergenic 40.0%
GGCTGTTATTCACATATACG+TGG - chr1_3:26847702-26847721 Msa0112290:intron 40.0%
GTTTGCTCATCAAGTTTGTG+AGG - chr1_3:26847784-26847803 Msa0112290:intron 40.0%
! CTTCTCTTTCATTTTCTCCG+TGG - chr1_3:26847821-26847840 Msa0112290:intron 40.0%
CAAAACCAATAGTAGTGCCA+CGG + chr1_3:26847841-26847860 None:intergenic 40.0%
! TGGAGTTTTTAACCATCCCA+TGG - chr1_3:26847881-26847900 Msa0112290:CDS 40.0%
GAGTGAAGAGAAATCACCAT+GGG + chr1_3:26847900-26847919 None:intergenic 40.0%
ATCACCATCAATATGAGCCA+TGG + chr1_3:26847922-26847941 None:intergenic 40.0%
ACAATCACATCACCCTGTAA+TGG + chr1_3:26848238-26848257 None:intergenic 40.0%
GATATACGTGTTGGATGTGA+AGG - chr1_3:26848268-26848287 Msa0112290:intron 40.0%
ATTCTCTCATTTGAGCGGAA+TGG + chr1_3:26848301-26848320 None:intergenic 40.0%
AGGCAATTCTCTCATTTGAG+CGG + chr1_3:26848306-26848325 None:intergenic 40.0%
GGCCATTTATATCCTTAGGA+TGG - chr1_3:26848747-26848766 Msa0112290:intron 40.0%
CACATACCAAATGAACTCGT+GGG + chr1_3:26848871-26848890 None:intergenic 40.0%
TCACATACCAAATGAACTCG+TGG + chr1_3:26848872-26848891 None:intergenic 40.0%
CCGGCAATAATTAAGTAGGA+AGG + chr1_3:26849007-26849026 None:intergenic 40.0%
!!! TTTATTTTTTTGGGGGGTGG+GGG - chr1_3:26849108-26849127 Msa0112290:intron 40.0%
! TTATGGAACTTTTGACAGGG+AGG - chr1_3:26849174-26849193 Msa0112290:intron 40.0%
GAGGAACGTGAAGATTGTAT+AGG - chr1_3:26849193-26849212 Msa0112290:intron 40.0%
GGAACGTGAAGATTGTATAG+GGG - chr1_3:26849195-26849214 Msa0112290:intron 40.0%
!!! AGGGGTGAGTTTTGAATTTG+TGG - chr1_3:26849213-26849232 Msa0112290:intron 40.0%
!! TTAGCCTTAAAGCACAAAGC+TGG - chr1_3:26849237-26849256 Msa0112290:intron 40.0%
AGGCACGTTATTCATTTGCA+AGG - chr1_3:26849332-26849351 Msa0112290:intron 40.0%
! TTACTTCTTTTCGGATCGAC+AGG - chr1_3:26849534-26849553 Msa0112290:intron 40.0%
TTGGCAAATGAGCTCAACAT+AGG - chr1_3:26849559-26849578 Msa0112290:intron 40.0%
TGAAGATATGAGCAATCAGC+AGG - chr1_3:26849585-26849604 Msa0112290:intron 40.0%
CAATGAGATGAGCAAGATGA+TGG + chr1_3:26849723-26849742 None:intergenic 40.0%
! TTCTTTTGCGATGTGTCTCA+TGG - chr1_3:26849784-26849803 Msa0112290:intron 40.0%
GCTGAAAAGGAGAAAAGCAA+TGG + chr1_3:26849814-26849833 None:intergenic 40.0%
! TTTCTCCTTTTCAGCATGCA+AGG - chr1_3:26849819-26849838 Msa0112290:intron 40.0%
TTTGTCCTTGCATGCTGAAA+AGG + chr1_3:26849827-26849846 None:intergenic 40.0%
!! AGATTGCTATGCTGCTGTTT+TGG - chr1_3:26849867-26849886 Msa0112290:intron 40.0%
TCATCTTTGCTGAGAGACTA+TGG - chr1_3:26849916-26849935 Msa0112290:intron 40.0%
! TGATCTTTTGCAACCCTATG+TGG - chr1_3:26849960-26849979 Msa0112290:CDS 40.0%
GTGGATTCACAAGAAGTAGA+AGG - chr1_3:26849979-26849998 Msa0112290:CDS 40.0%
!!! AATTTTGAAGTTGGCCACGA+CGG - chr1_3:26850045-26850064 Msa0112290:intron 40.0%
! GGGCATAATGAATTTTCACC+TGG - chr1_3:26850076-26850095 Msa0112290:intron 40.0%
TAGCGTGAAATTTCTCTTGG+AGG - chr1_3:26850110-26850129 Msa0112290:intron 40.0%
! GAGGCCATATTTGAAGCATA+TGG - chr1_3:26850129-26850148 Msa0112290:intron 40.0%
AAAAGTCCAGCAACAGTATG+AGG - chr1_3:26850170-26850189 Msa0112290:intron 40.0%
AAAGTCCAGCAACAGTATGA+GGG - chr1_3:26850171-26850190 Msa0112290:intron 40.0%
TTGCCATCTGAAAATGCTTG+AGG - chr1_3:26850228-26850247 Msa0112290:intron 40.0%
TTGTAAGAGTCACTCCTATG+TGG + chr1_3:26850461-26850480 None:intergenic 40.0%
! TGAGTAGCGGAATTTGACAG+TGG + chr1_3:26841540-26841559 None:intergenic 45.0%
GAAATGAAGGGTCTCTGTGT+AGG + chr1_3:26841581-26841600 None:intergenic 45.0%
TGACCCCAATTTCAAAGGAC+AGG - chr1_3:26841634-26841653 Msa0112290:three_prime_UTR 45.0%
GTTGGAGCTCTCATCAAAAG+AGG - chr1_3:26841865-26841884 Msa0112290:CDS 45.0%
AAAGAGGAAAGGTCTACTGG+AGG - chr1_3:26841881-26841900 Msa0112290:CDS 45.0%
AAGAGGAAAGGTCTACTGGA+GGG - chr1_3:26841882-26841901 Msa0112290:CDS 45.0%
TGATGAAGGGTTCGTTTGGA+AGG - chr1_3:26842163-26842182 Msa0112290:intron 45.0%
GATGAAGGGTTCGTTTGGAA+GGG - chr1_3:26842164-26842183 Msa0112290:intron 45.0%
TTCTTGTCAACGACACCAGT+AGG - chr1_3:26842414-26842433 Msa0112290:intron 45.0%
!!! CAATTTCTAGCGCTTTTGGC+TGG - chr1_3:26842466-26842485 Msa0112290:intron 45.0%
GAGGAAGTTACTCCTATCCA+AGG + chr1_3:26842504-26842523 None:intergenic 45.0%
TTTACAAGCCTTTATGGGGG+GGG - chr1_3:26842566-26842585 Msa0112290:CDS 45.0%
! GACGGGACTTCTAAAAAACC+TGG + chr1_3:26842642-26842661 None:intergenic 45.0%
TCACCTTCACAACAGCATTG+AGG + chr1_3:26842855-26842874 None:intergenic 45.0%
GACATGCCATGAAAGCTTCA+AGG + chr1_3:26843033-26843052 None:intergenic 45.0%
AGCTTTCATGGCATGTCTCT+AGG - chr1_3:26843036-26843055 Msa0112290:CDS 45.0%
GTATGCGTGCAGTAAACCTA+AGG + chr1_3:26843364-26843383 None:intergenic 45.0%
CTCCAGATTATTCACTTCCC+TGG - chr1_3:26843386-26843405 Msa0112290:intron 45.0%
TGCCAGGGAAGTGAATAATC+TGG + chr1_3:26843391-26843410 None:intergenic 45.0%
CAGAGACAATTCACAAGCAC+TGG - chr1_3:26843415-26843434 Msa0112290:intron 45.0%
!! GACAATTCACAAGCACTGGA+AGG - chr1_3:26843419-26843438 Msa0112290:intron 45.0%
TAAACGCACTGCAAAGCATG+TGG + chr1_3:26843509-26843528 None:intergenic 45.0%
TGCAGTGCGTTTATGATTGG+AGG - chr1_3:26843516-26843535 Msa0112290:intron 45.0%
ATTGACCAACGCACATTGTG+TGG - chr1_3:26843548-26843567 Msa0112290:intron 45.0%
TTGTGTGGAGCATGATACAC+AGG - chr1_3:26843563-26843582 Msa0112290:intron 45.0%
AGGGGATGACTCGAAATATG+TGG - chr1_3:26844026-26844045 Msa0112290:intron 45.0%
AGGTATGCCTGTCATGATAG+AGG - chr1_3:26844052-26844071 Msa0112290:intron 45.0%
!! CATACTTTGGGTGTCGAGAA+TGG - chr1_3:26844109-26844128 Msa0112290:intron 45.0%
CAGTGCATGTTAGCCATGAA+TGG - chr1_3:26844319-26844338 Msa0112290:CDS 45.0%
TCACTCGATTGCAACTTCGA+AGG - chr1_3:26844387-26844406 Msa0112290:intron 45.0%
CACTCGATTGCAACTTCGAA+GGG - chr1_3:26844388-26844407 Msa0112290:intron 45.0%
GATTGCAACTTCGAAGGGTT+GGG - chr1_3:26844393-26844412 Msa0112290:intron 45.0%
ATTGCAACTTCGAAGGGTTG+GGG - chr1_3:26844394-26844413 Msa0112290:intron 45.0%
! TTCTCCTGGGAACGTTTTGT+TGG - chr1_3:26844540-26844559 Msa0112290:intron 45.0%
TGAACCAACAAAACGTTCCC+AGG + chr1_3:26844547-26844566 None:intergenic 45.0%
! ATTCTCCCCGGTGCTAATTT+GGG + chr1_3:26844823-26844842 None:intergenic 45.0%
GAATCGAACTTGAGACCTTG+AGG - chr1_3:26844839-26844858 Msa0112290:CDS 45.0%
TAAATCACAACCAACGGCTC+TGG + chr1_3:26845083-26845102 None:intergenic 45.0%
! CAGTAGAAAGCGAGGAGTTT+TGG - chr1_3:26845113-26845132 Msa0112290:intron 45.0%
! TGAACACTCTCAAAGGGTGT+TGG - chr1_3:26845312-26845331 Msa0112290:intron 45.0%
ATAGGTGGAAGGAGAAAGGA+AGG + chr1_3:26845748-26845767 None:intergenic 45.0%
GAGAATAGGTGGAAGGAGAA+AGG + chr1_3:26845752-26845771 None:intergenic 45.0%
! TAGAAGTGGTGGAGAATAGG+TGG + chr1_3:26845763-26845782 None:intergenic 45.0%
GAAGGATTCTGTAACGGTTG+TGG - chr1_3:26845966-26845985 Msa0112290:intron 45.0%
GAAATTGTGTCTCCTCCAAG+AGG + chr1_3:26845997-26846016 None:intergenic 45.0%
CATGGATCGTCTGAGTTGTT+AGG - chr1_3:26846143-26846162 Msa0112290:intron 45.0%
! AACGATCAAGGAGAGTGCAT+TGG - chr1_3:26846401-26846420 Msa0112290:intron 45.0%
! ACGATCAAGGAGAGTGCATT+GGG - chr1_3:26846402-26846421 Msa0112290:intron 45.0%
! GTGTCTAGGATTGCAAGTGT+TGG + chr1_3:26846538-26846557 None:intergenic 45.0%
! CCTCGGATTAGACGATTCTT+GGG + chr1_3:26846615-26846634 None:intergenic 45.0%
CCAAGAATCGTCTAATCCGA+GGG - chr1_3:26846613-26846632 Msa0112290:intron 45.0%
CAAGAATCGTCTAATCCGAG+GGG - chr1_3:26846614-26846633 Msa0112290:intron 45.0%
! ACTTCTTCACACGGGTCTTT+TGG + chr1_3:26846817-26846836 None:intergenic 45.0%
TTTCTCCGTGGCACTACTAT+TGG - chr1_3:26847833-26847852 Msa0112290:intron 45.0%
GAAGAGAAATCACCATGGGA+TGG + chr1_3:26847896-26847915 None:intergenic 45.0%
GGAGTGAAGAGAAATCACCA+TGG + chr1_3:26847901-26847920 None:intergenic 45.0%
GGTGATTTCTCTTCACTCCA+TGG - chr1_3:26847902-26847921 Msa0112290:intron 45.0%
CACTCCATGGCTCATATTGA+TGG - chr1_3:26847915-26847934 Msa0112290:intron 45.0%
CTTTGTCTTGCAGGGTGTAT+TGG - chr1_3:26848088-26848107 Msa0112290:intron 45.0%
GAACTTATGCCCATTGTACC+AGG - chr1_3:26848188-26848207 Msa0112290:intron 45.0%
!! CATTCTAGGGTTCCATCCTA+AGG + chr1_3:26848762-26848781 None:intergenic 45.0%
GCAGAACTTGGTATCGTTAG+AGG - chr1_3:26848812-26848831 Msa0112290:intron 45.0%
GAACTTGGTATCGTTAGAGG+CGG - chr1_3:26848815-26848834 Msa0112290:intron 45.0%
! AAGAGGTGTGAACACTAAGC+CGG + chr1_3:26849026-26849045 None:intergenic 45.0%
ACATACATGTAGTGAGCCAG+CGG + chr1_3:26849640-26849659 None:intergenic 45.0%
CTATCACCAAATTCCTGGTC+TGG + chr1_3:26850015-26850034 None:intergenic 45.0%
AAGTCCAGCAACAGTATGAG+GGG - chr1_3:26850172-26850191 Msa0112290:intron 45.0%
! TCGCCTCAAGCATTTTCAGA+TGG + chr1_3:26850234-26850253 None:intergenic 45.0%
TAGAGAAGAGACGGGACTAT+AGG - chr1_3:26850297-26850316 Msa0112290:CDS 45.0%
!! CAATATTATATATTATAAAA+TGG - chr1_3:26844485-26844504 Msa0112290:intron 5.0%
!!! TTATATTTTTTCTTATAAAA+TGG + chr1_3:26846511-26846530 None:intergenic 5.0%
!!! TTTTATTTTTTATTTTTTTG+GGG - chr1_3:26849100-26849119 Msa0112290:intron 5.0%
!! ATTATTTATTTCATTAATTA+TGG - chr1_3:26849157-26849176 Msa0112290:intron 5.0%
GAGTGTGTCTACGTGAGTAG+CGG + chr1_3:26841553-26841572 None:intergenic 50.0%
AAGGTCTACTGGAGGGAATG+TGG - chr1_3:26841889-26841908 Msa0112290:CDS 50.0%
GGACTTTGTGGTAGACTCCA+AGG - chr1_3:26841946-26841965 Msa0112290:CDS 50.0%
CTCCAGACAAACCCTGAGAT+AGG - chr1_3:26842209-26842228 Msa0112290:intron 50.0%
GTCCTATCTCAGGGTTTGTC+TGG + chr1_3:26842214-26842233 None:intergenic 50.0%
TCAACGGTGTTCAGTCCTAC+TGG + chr1_3:26842432-26842451 None:intergenic 50.0%
GCTGGCATGCCTTATAACCT+TGG - chr1_3:26842484-26842503 Msa0112290:intron 50.0%
TTACAAGCCTTTATGGGGGG+GGG - chr1_3:26842567-26842586 Msa0112290:CDS 50.0%
GCTTATGGCGGTTTCTCGAT+TGG + chr1_3:26842735-26842754 None:intergenic 50.0%
ATGCTCCACACAATGTGCGT+TGG + chr1_3:26843556-26843575 None:intergenic 50.0%
CGATTGCAACTTCGAAGGGT+TGG - chr1_3:26844392-26844411 Msa0112290:intron 50.0%
!! CTTGAAAGCATCACTGCTGC+AGG + chr1_3:26844463-26844482 None:intergenic 50.0%
TAGCCCACCCAAATTAGCAC+CGG - chr1_3:26844813-26844832 Msa0112290:intron 50.0%
! GATTCTCCCCGGTGCTAATT+TGG + chr1_3:26844824-26844843 None:intergenic 50.0%
GTCTCAAGTTCGATTCTCCC+CGG + chr1_3:26844835-26844854 None:intergenic 50.0%
TCGAACTTGAGACCTTGAGG+AGG - chr1_3:26844842-26844861 Msa0112290:CDS 50.0%
!!! CGAGGAGTTTTGGAGAGATG+TGG - chr1_3:26845123-26845142 Msa0112290:intron 50.0%
TGGACGTTTGCCAGTTCTTC+AGG - chr1_3:26845159-26845178 Msa0112290:intron 50.0%
!! CACTCTCAAAGGGTGTTGGA+TGG - chr1_3:26845316-26845335 Msa0112290:intron 50.0%
! AGTGGTGGAGAATAGGTGGA+AGG + chr1_3:26845759-26845778 None:intergenic 50.0%
ACGGTTGTGGGATATCCTCT+TGG - chr1_3:26845979-26845998 Msa0112290:intron 50.0%
GTTGTGGGATATCCTCTTGG+AGG - chr1_3:26845982-26846001 Msa0112290:intron 50.0%
GGGAGTTGTATCTCGTGTAG+AGG - chr1_3:26846026-26846045 Msa0112290:intron 50.0%
CTCCTTGATCGTTGAACGCT+GGG + chr1_3:26846394-26846413 None:intergenic 50.0%
TCTCCTTGATCGTTGAACGC+TGG + chr1_3:26846395-26846414 None:intergenic 50.0%
! CGATCAAGGAGAGTGCATTG+GGG - chr1_3:26846403-26846422 Msa0112290:intron 50.0%
GGATTAGACGATTCTTGGGC+CGG + chr1_3:26846611-26846630 None:intergenic 50.0%
CCCAAGAATCGTCTAATCCG+AGG - chr1_3:26846612-26846631 Msa0112290:intron 50.0%
! CCCTCGGATTAGACGATTCT+TGG + chr1_3:26846616-26846635 None:intergenic 50.0%
AGGCATGGCATCATACTGCT+TGG - chr1_3:26847120-26847139 Msa0112290:intron 50.0%
GGCATGGCATCATACTGCTT+GGG - chr1_3:26847121-26847140 Msa0112290:intron 50.0%
! AGGAGGCTTGGTACAACACA+TGG + chr1_3:26847490-26847509 None:intergenic 50.0%
CTCCTAGGTTTCCCTTGTCT+TGG - chr1_3:26847559-26847578 Msa0112290:intron 50.0%
CTCCAAGACAAGGGAAACCT+AGG + chr1_3:26847564-26847583 None:intergenic 50.0%
TTCAAACATGCTCGCAGTGC+AGG + chr1_3:26847610-26847629 None:intergenic 50.0%
GGTGATTGCAGATGCCAGAA+CGG - chr1_3:26847681-26847700 Msa0112290:intron 50.0%
GCAGGTGATACTGCAGAACT+TGG - chr1_3:26848800-26848819 Msa0112290:intron 50.0%
! CTTTTCGGATCGACAGGTCT+TGG - chr1_3:26849540-26849559 Msa0112290:intron 50.0%
! TTTGTGAGATTGACTCCCGC+TGG - chr1_3:26849621-26849640 Msa0112290:intron 50.0%
CATACATGTAGTGAGCCAGC+GGG + chr1_3:26849639-26849658 None:intergenic 50.0%
AGATGACGATGCAGCAGCAA+CGG + chr1_3:26849902-26849921 None:intergenic 50.0%
CAAATTCCTGGTCTGGTGGT+TGG + chr1_3:26850008-26850027 None:intergenic 50.0%
CAACCACCAGACCAGGAATT+TGG - chr1_3:26850006-26850025 Msa0112290:CDS 50.0%
TCACCAAATTCCTGGTCTGG+TGG + chr1_3:26850012-26850031 None:intergenic 50.0%
CTGGGCTATCACCAAATTCC+TGG + chr1_3:26850020-26850039 None:intergenic 50.0%
CACGCTAACATGACATCTCC+AGG + chr1_3:26850097-26850116 None:intergenic 50.0%
GGACTATAGGCAAGAGCTCA+TGG - chr1_3:26850310-26850329 Msa0112290:CDS 50.0%
GGTAGACTCCAAGGATCAGC+AGG - chr1_3:26841955-26841974 Msa0112290:CDS 55.0%
TACAAGCCTTTATGGGGGGG+GGG - chr1_3:26842568-26842587 Msa0112290:CDS 55.0%
AGCCCACCCAAATTAGCACC+GGG - chr1_3:26844814-26844833 Msa0112290:intron 55.0%
! TCCCCGGTGCTAATTTGGGT+GGG + chr1_3:26844819-26844838 None:intergenic 55.0%
TTGGAGTGTGCTCCTCCTCA+AGG + chr1_3:26844857-26844876 None:intergenic 55.0%
! TTGAGGAGGAGCACACTCCA+AGG - chr1_3:26844856-26844875 Msa0112290:CDS 55.0%
!! CAGGTTTTAGCCAGAGCCGT+TGG - chr1_3:26845070-26845089 Msa0112290:intron 55.0%
! TCAAGGAGAGTGCATTGGGG+TGG - chr1_3:26846406-26846425 Msa0112290:intron 55.0%
GTGCATTGGGGTGGCATTTC+AGG - chr1_3:26846415-26846434 Msa0112290:intron 55.0%
CCAATCCCATCGTCCACTTG+CGG - chr1_3:26846638-26846657 Msa0112290:intron 55.0%
CAATCCCATCGTCCACTTGC+GGG - chr1_3:26846639-26846658 Msa0112290:intron 55.0%
AATCCCATCGTCCACTTGCG+GGG - chr1_3:26846640-26846659 Msa0112290:intron 55.0%
GTTGCCCCTCATACTGTTGC+TGG + chr1_3:26850179-26850198 None:intergenic 55.0%
ACAAGCCTTTATGGGGGGGG+GGG - chr1_3:26842569-26842588 Msa0112290:CDS 60.0%
AACATCCCCCCCCCCCATAA+AGG + chr1_3:26842577-26842596 None:intergenic 60.0%
GCCCACCCAAATTAGCACCG+GGG - chr1_3:26844815-26844834 Msa0112290:intron 60.0%
! CTCCCCGGTGCTAATTTGGG+TGG + chr1_3:26844820-26844839 None:intergenic 60.0%
GGCCCAGCGTTCAACGATCA+AGG - chr1_3:26846389-26846408 Msa0112290:intron 60.0%
GACGATGGGATTGGACCCCT+CGG + chr1_3:26846632-26846651 None:intergenic 60.0%
CCGCAAGTGGACGATGGGAT+TGG + chr1_3:26846641-26846660 None:intergenic 60.0%
ATCCCATCGTCCACTTGCGG+GGG - chr1_3:26846641-26846660 Msa0112290:intron 60.0%
AGGTGACCAACCACCAGACC+AGG - chr1_3:26849999-26850018 Msa0112290:CDS 60.0%
!! TTGGCCACGACGGATTGCTC+TGG - chr1_3:26850055-26850074 Msa0112290:intron 60.0%
!! TGGCCACGACGGATTGCTCT+GGG - chr1_3:26850056-26850075 Msa0112290:intron 60.0%
ATGCCCAGAGCAATCCGTCG+TGG + chr1_3:26850062-26850081 None:intergenic 60.0%
TCCCATCGTCCACTTGCGGG+GGG - chr1_3:26846642-26846661 Msa0112290:intron 65.0%
TCCCCCCGCAAGTGGACGAT+GGG + chr1_3:26846646-26846665 None:intergenic 65.0%
ATCGTCCACTTGCGGGGGGA+CGG - chr1_3:26846646-26846665 Msa0112290:intron 65.0%
GTCCCCCCGCAAGTGGACGA+TGG + chr1_3:26846647-26846666 None:intergenic 70.0%
TCGTCCACTTGCGGGGGGAC+GGG - chr1_3:26846647-26846666 Msa0112290:intron 70.0%
CGTCCACTTGCGGGGGGACG+GGG - chr1_3:26846648-26846667 Msa0112290:intron 75.0%
! GGTCCCCGTCCCCCCGCAAG+TGG + chr1_3:26846654-26846673 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 26841352 26850566 26841352 ID=Msa0112290;Name=Msa0112290
chr1_3 mRNA 26841352 26850566 26841352 ID=Msa0112290-mRNA-1;Parent=Msa0112290;Name=Msa0112290-mRNA-1;_AED=0.23;_eAED=0.23;_QI=133|0.88|0.94|1|1|1|18|483|537
chr1_3 exon 26841352 26842085 26841352 ID=Msa0112290-mRNA-1:exon:9062;Parent=Msa0112290-mRNA-1
chr1_3 exon 26842308 26842362 26842308 ID=Msa0112290-mRNA-1:exon:9061;Parent=Msa0112290-mRNA-1
chr1_3 exon 26842531 26842602 26842531 ID=Msa0112290-mRNA-1:exon:9060;Parent=Msa0112290-mRNA-1
chr1_3 exon 26842702 26842726 26842702 ID=Msa0112290-mRNA-1:exon:9059;Parent=Msa0112290-mRNA-1
chr1_3 exon 26842856 26842941 26842856 ID=Msa0112290-mRNA-1:exon:9058;Parent=Msa0112290-mRNA-1
chr1_3 exon 26843035 26843122 26843035 ID=Msa0112290-mRNA-1:exon:9057;Parent=Msa0112290-mRNA-1
chr1_3 exon 26843571 26843674 26843571 ID=Msa0112290-mRNA-1:exon:9056;Parent=Msa0112290-mRNA-1
chr1_3 exon 26843761 26843817 26843761 ID=Msa0112290-mRNA-1:exon:9055;Parent=Msa0112290-mRNA-1
chr1_3 exon 26844273 26844352 26844273 ID=Msa0112290-mRNA-1:exon:9054;Parent=Msa0112290-mRNA-1
chr1_3 exon 26844817 26844916 26844817 ID=Msa0112290-mRNA-1:exon:9053;Parent=Msa0112290-mRNA-1
chr1_3 exon 26845482 26845540 26845482 ID=Msa0112290-mRNA-1:exon:9052;Parent=Msa0112290-mRNA-1
chr1_3 exon 26845724 26845790 26845724 ID=Msa0112290-mRNA-1:exon:9051;Parent=Msa0112290-mRNA-1
chr1_3 exon 26845871 26845948 26845871 ID=Msa0112290-mRNA-1:exon:9050;Parent=Msa0112290-mRNA-1
chr1_3 exon 26846738 26846845 26846738 ID=Msa0112290-mRNA-1:exon:9049;Parent=Msa0112290-mRNA-1
chr1_3 exon 26847865 26847909 26847865 ID=Msa0112290-mRNA-1:exon:9048;Parent=Msa0112290-mRNA-1
chr1_3 exon 26849048 26849098 26849048 ID=Msa0112290-mRNA-1:exon:9047;Parent=Msa0112290-mRNA-1
chr1_3 exon 26849942 26850058 26849942 ID=Msa0112290-mRNA-1:exon:9046;Parent=Msa0112290-mRNA-1
chr1_3 exon 26850263 26850566 26850263 ID=Msa0112290-mRNA-1:exon:9045;Parent=Msa0112290-mRNA-1
chr1_3 five_prime_UTR 26850434 26850566 26850434 ID=Msa0112290-mRNA-1:five_prime_utr;Parent=Msa0112290-mRNA-1
chr1_3 CDS 26850263 26850433 26850263 ID=Msa0112290-mRNA-1:cds;Parent=Msa0112290-mRNA-1
chr1_3 CDS 26849942 26850058 26849942 ID=Msa0112290-mRNA-1:cds;Parent=Msa0112290-mRNA-1
chr1_3 CDS 26849048 26849098 26849048 ID=Msa0112290-mRNA-1:cds;Parent=Msa0112290-mRNA-1
chr1_3 CDS 26847865 26847909 26847865 ID=Msa0112290-mRNA-1:cds;Parent=Msa0112290-mRNA-1
chr1_3 CDS 26846738 26846845 26846738 ID=Msa0112290-mRNA-1:cds;Parent=Msa0112290-mRNA-1
chr1_3 CDS 26845871 26845948 26845871 ID=Msa0112290-mRNA-1:cds;Parent=Msa0112290-mRNA-1
chr1_3 CDS 26845724 26845790 26845724 ID=Msa0112290-mRNA-1:cds;Parent=Msa0112290-mRNA-1
chr1_3 CDS 26845482 26845540 26845482 ID=Msa0112290-mRNA-1:cds;Parent=Msa0112290-mRNA-1
chr1_3 CDS 26844817 26844916 26844817 ID=Msa0112290-mRNA-1:cds;Parent=Msa0112290-mRNA-1
chr1_3 CDS 26844273 26844352 26844273 ID=Msa0112290-mRNA-1:cds;Parent=Msa0112290-mRNA-1
chr1_3 CDS 26843761 26843817 26843761 ID=Msa0112290-mRNA-1:cds;Parent=Msa0112290-mRNA-1
chr1_3 CDS 26843571 26843674 26843571 ID=Msa0112290-mRNA-1:cds;Parent=Msa0112290-mRNA-1
chr1_3 CDS 26843035 26843122 26843035 ID=Msa0112290-mRNA-1:cds;Parent=Msa0112290-mRNA-1
chr1_3 CDS 26842856 26842941 26842856 ID=Msa0112290-mRNA-1:cds;Parent=Msa0112290-mRNA-1
chr1_3 CDS 26842702 26842726 26842702 ID=Msa0112290-mRNA-1:cds;Parent=Msa0112290-mRNA-1
chr1_3 CDS 26842531 26842602 26842531 ID=Msa0112290-mRNA-1:cds;Parent=Msa0112290-mRNA-1
chr1_3 CDS 26842308 26842362 26842308 ID=Msa0112290-mRNA-1:cds;Parent=Msa0112290-mRNA-1
chr1_3 CDS 26841835 26842085 26841835 ID=Msa0112290-mRNA-1:cds;Parent=Msa0112290-mRNA-1
chr1_3 three_prime_UTR 26841352 26841834 26841352 ID=Msa0112290-mRNA-1:three_prime_utr;Parent=Msa0112290-mRNA-1
Gene Sequence

>Msa0112290

ATGGCTGTTGCACTTTCTAGTTACTGTTCCATGTTCTCTGTGTTATCTTCTTCCACTGTCAAATTCCGCTACTCACGTAGACACACTCACACACCTACACAGAGACCCTTCATTTCTATTCATTGCAGCCGCACTCCTTCTTCTAATTCTGACCCCAATTTCAAAGGACAGAATTCGTTGGAGCTCTCATCAAAAGAGGAAAGGTCTACTGGAGGGAATGTGGTGCCAGCTTCTTTTAAGTCTTCAAGGAAAAATAAGGACTTTGTGGTAGACTCCAAGGATCAGCAGGGTGAATCAAGTGTTTTACAAGATTCGGCTTTCCTCAATGCTGTTGTGAAGGTTAAAGTCAAGAGAAGAGGGGATGACTCGAAATATGTGGCTAAGGTTTTAGCCAGAGCCGTTGGTTGTGATTTAGCTTTGCTTTCAGTAGAAAGCGAGGAGTTTTGGAGAGATGTGGAACCTCTTAAATTTGGACGTTTGCCAGTTCTTCAGGATTCTGTAACGGTTGTGGGATATCCTCTTGGAGGAGACACAATTTCAGTGACAAAGGGAGTTGTATCTCGTGTAGAGGTTACATCATATGCTCATGGATCGTCTGAGTTGTTAGGAATTCAAATTGATGCAGCAATAAATCCTGGCAATAGCGGAGGCCCAGCGTTCAACGATCAAGGAGAGTGCATTGGGGTGGCATTTCAGGTCTACAGATCTGAAGATGCTGAGAATATTGGATATGTGATTCCATCAACAGTTGTATCTCATTTTCTGACTGACTACGAAAAGAATGGCAAGTATACTGGTTTCCCTTGTCTTGGAGTACTTATACAAAAGTTAGAGAATCCTGCACTGCGAGCATGTTTGAAACTACAGTCTAATGAGGGTGTATTGGTACGTAGAGTTGAACCAACTTCTGATGCAAATAATGTATTAAAGGAGGGTGATGTGATTGTCAGCTTTGATGATATACGTGTTGGATGTGAAGGAACAGTTCCATTCCGCTCAAATGAGAGAATTGCCTTTCACTACCTCATTAGTCAAAAATTTGCAGGTGATACTGCAGAACTTGGTATCGTTAGAGGCGGAACATCAATGAAAGCTAAAGTTATTTTAAACCCACGAGTTCATTTGGTTCCCTTTCATATTGATGAAGGTCAGCCTTCCTACTTAATTATTGCCGGCTTAGTGTTCACACCTCTTTCAGAACCATTGATTGAGGAGGAACGTGAAGATTGTATAGGGCTAAAGTTATTGGCAAAGGCACGTTATTCATTTGCAAGGTTTAAAGGGGAACAAATTGTAATTCTCTCACAGGTCTTGGCAAATGAGCTCAACATAGGTTATGAAGATATGAGCAATCAGCAGGCAACATGCAAGGACAAATATCTGTGTTTTGAATTTGAAGATTGCTATGCTGCTGTTTTGGAGAGAGAAGCCGTTGCTGCTGCATCGTCATCTTTGCTGAGAGACTATGGTATTCCATCTGAAAGATCTTCTGATCTTTTGCAACCCTATGTGGATTCACAAGAAGTAGAAGGTGACCAACCACCAGACCAGGAATTTGGTGATAGCCCAGTTTCAAATTTTGAAGTTGGCCACGACGGATTGCTCTGGGCATAA

Protein sequence

>Msa0112290

MAVALSSYCSMFSVLSSSTVKFRYSRRHTHTPTQRPFISIHCSRTPSSNSDPNFKGQNSLELSSKEERSTGGNVVPASFKSSRKNKDFVVDSKDQQGESSVLQDSAFLNAVVKVKVKRRGDDSKYVAKVLARAVGCDLALLSVESEEFWRDVEPLKFGRLPVLQDSVTVVGYPLGGDTISVTKGVVSRVEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVYRSEDAENIGYVIPSTVVSHFLTDYEKNGKYTGFPCLGVLIQKLENPALRACLKLQSNEGVLVRRVEPTSDANNVLKEGDVIVSFDDIRVGCEGTVPFRSNERIAFHYLISQKFAGDTAELGIVRGGTSMKAKVILNPRVHLVPFHIDEGQPSYLIIAGLVFTPLSEPLIEEEREDCIGLKLLAKARYSFARFKGEQIVILSQVLANELNIGYEDMSNQQATCKDKYLCFEFEDCYAAVLEREAVAAASSSLLRDYGIPSERSSDLLQPYVDSQEVEGDQPPDQEFGDSPVSNFEVGHDGLLWA*