AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0175280


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0175280 MtrunA17_Chr1g0196111 90.652 460 24 1 97 537 9 468 0.0 843
Msa0175280 MtrunA17_Chr4g0059321 48.700 423 193 3 101 499 166 588 5.08e-137 409
Msa0175280 MtrunA17_Chr6g0448981 43.142 452 223 7 74 500 96 538 1.29e-110 340
Msa0175280 MtrunA17_Chr1g0196121 86.885 122 10 2 1 122 1 116 1.88e-63 204
Msa0175280 MtrunA17_Chr6g0450671 30.268 261 161 8 121 372 180 428 3.25e-14 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0175280 AT2G47940.1 61.613 620 142 10 1 537 1 607 0.0 708
Msa0175280 AT2G47940.2 61.874 619 141 11 1 537 1 606 0.0 707
Msa0175280 AT5G40200.1 44.309 492 222 7 32 499 123 586 4.31e-131 394
Msa0175280 AT5G36950.1 40.929 452 232 8 75 500 129 571 5.21e-101 317
Msa0175280 AT1G65640.2 38.515 431 224 7 88 498 104 513 9.44e-90 285
Msa0175280 AT1G65640.1 42.407 349 184 5 88 435 104 436 2.76e-86 274
Msa0175280 AT1G65630.1 36.782 435 242 9 101 515 133 554 5.44e-82 266
Msa0175280 AT5G40560.1 36.465 447 232 9 76 500 57 473 7.14e-77 251
Msa0175280 AT3G16540.1 32.331 399 250 6 108 504 155 535 1.30e-59 207
Msa0175280 AT3G16550.1 32.048 415 228 8 108 498 115 499 9.76e-59 203
Msa0175280 AT1G51150.1 41.379 116 68 0 101 216 94 209 6.79e-25 103
Msa0175280 AT5G54745.1 33.333 147 67 4 88 232 74 191 7.45e-14 70.9
Msa0175280 AT3G27925.1 28.352 261 166 8 121 372 187 435 5.19e-13 71.6
Msa0175280 AT3G27925.2 28.352 261 166 8 121 372 187 435 5.19e-13 71.6
Msa0175280 AT5G39830.1 27.612 268 155 12 120 369 197 443 2.55e-12 69.3

Find 146 sgRNAs with CRISPR-Local

Find 612 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATCGCATATTCTGTATTT+TGG 0.091159 1_4:-61176110 Msa0175280:three_prime_UTR
GTGCATTGGGGTGGCATTTC+AGG 0.121430 1_4:-61180124 Msa0175280:intron
ATTTACCTGTCCTTTGAAAT+TGG 0.159675 1_4:+61184932 None:intergenic
TCATGATCAGCTAAAGTTAT+TGG 0.185967 1_4:-61177226 Msa0175280:intron
TATTCATTTGCAAGGTTTAA+AGG 0.216596 1_4:-61177192 Msa0175280:CDS
CAGTAGAAAGCGAGGAGTTT+TGG 0.221279 1_4:-61181427 Msa0175280:CDS
CCAACTTCAAAATTTGAAAC+TGG 0.272180 1_4:+61176496 None:intergenic
TGATGCAAATAATGTATTAA+AGG 0.283856 1_4:-61178400 Msa0175280:CDS
CAACCACCAGACCAGGAATT+TGG 0.295454 1_4:-61176526 Msa0175280:CDS
GATGTGGAACCTCTTAAATT+TGG 0.297774 1_4:-61181401 Msa0175280:CDS
TGGACGTTTGCCAGTTCTTC+AGG 0.302967 1_4:-61181381 Msa0175280:intron
CTTTGTCTTGCAGGGTGTAT+TGG 0.305421 1_4:-61178445 Msa0175280:intron
CCTTCCTACTTAATTATTGC+CGG 0.308967 1_4:-61177528 Msa0175280:CDS
AGATTGCTATGCTGCTGTTT+TGG 0.312140 1_4:-61176665 Msa0175280:CDS
CTCCTAGGTTTCCCTTGTCT+TGG 0.319367 1_4:-61178974 Msa0175280:intron
TTTACCTGTCCTTTGAAATT+GGG 0.327411 1_4:+61184933 None:intergenic
TCTGAAGATGCTGAGAATAT+TGG 0.329846 1_4:-61179522 Msa0175280:CDS
AGGAACGTGAAGATTGTATA+GGG 0.339523 1_4:-61177338 Msa0175280:CDS
GTGACCATATGCTTCAAATA+TGG 0.350181 1_4:+61176399 None:intergenic
ATTCATTTGCAAGGTTTAAA+GGG 0.357832 1_4:-61177191 Msa0175280:CDS
GCAGAACTTGGTATCGTTAG+AGG 0.364713 1_4:-61177720 Msa0175280:CDS
TTTAAACCCACGAGTTCATT+TGG 0.374117 1_4:-61177670 Msa0175280:intron
AAATGAGATACAACTGTTGA+TGG 0.387290 1_4:+61179489 None:intergenic
GTTGCCCCTCATACTGTTGC+TGG 0.389089 1_4:+61176356 None:intergenic
CTCCTTGATCGTTGAACGCT+GGG 0.390026 1_4:+61180148 None:intergenic
ACGATCAAGGAGAGTGCATT+GGG 0.390362 1_4:-61180137 Msa0175280:CDS
ACAATGTTATACAGATTTGC+AGG 0.393430 1_4:-61177750 Msa0175280:intron
AAGGATTCTGTAACGGTTGT+GGG 0.394720 1_4:-61180572 Msa0175280:CDS
TCATCTTTGCTGAGAGACTA+TGG 0.395374 1_4:-61176616 Msa0175280:CDS
GAAAAGAATGGCAAGTATAC+TGG 0.395730 1_4:-61179453 Msa0175280:intron
CATGGATCGTCTGAGTTGTT+AGG 0.397668 1_4:-61180396 Msa0175280:CDS
TTGGCCACGACGGATTGCTC+TGG 0.403272 1_4:-61176477 Msa0175280:CDS
CTGGGCTATCACCAAATTCC+TGG 0.406265 1_4:+61176515 None:intergenic
AAAAGTCCAGCAACAGTATG+AGG 0.414043 1_4:-61176362 Msa0175280:three_prime_UTR
CTTGAAGACTTAAAAGAAGC+TGG 0.416711 1_4:+61184657 None:intergenic
TTCAAACATGCTCGCAGTGC+AGG 0.417589 1_4:+61178926 None:intergenic
GAAGGATTCTGTAACGGTTG+TGG 0.421436 1_4:-61180573 Msa0175280:intron
CTATCACCAAATTCCTGGTC+TGG 0.424623 1_4:+61176520 None:intergenic
TTGAGCTGGACTCTAAATAA+TGG 0.425152 1_4:+61175980 None:intergenic
CTTCCAAGTTTATCAAATCA+AGG 0.434284 1_4:+61176160 None:intergenic
TAGAGAAGAGACGGGACTAT+AGG 0.436022 1_4:-61176235 Msa0175280:three_prime_UTR
TCAAAAGAGGAAAGGTCTAC+TGG 0.436520 1_4:-61184693 Msa0175280:CDS
TTCAAACATAAGATACTAGA+AGG 0.437897 1_4:-61185213 Msa0175280:five_prime_UTR
TGTTAGCGTGAAATTTCTCT+TGG 0.438643 1_4:-61176425 Msa0175280:three_prime_UTR
GTTCCCTTTCATATTGATGA+AGG 0.442609 1_4:-61177555 Msa0175280:CDS
GAGGAACGTGAAGATTGTAT+AGG 0.444272 1_4:-61177339 Msa0175280:CDS
GGCAAACGTCCAAATTTAAG+AGG 0.453895 1_4:+61181392 None:intergenic
ACTCCTTGATTTGATAAACT+TGG 0.467087 1_4:-61176163 Msa0175280:three_prime_UTR
GTGGATTCACAAGAAGTAGA+AGG 0.468763 1_4:-61176553 Msa0175280:CDS
CTGACTGACTACGAAAAGAA+TGG 0.470639 1_4:-61179465 Msa0175280:CDS
ACATTATTTGCATCAGAAGT+TGG 0.472154 1_4:+61178408 None:intergenic
GAGGCCATATTTGAAGCATA+TGG 0.472255 1_4:-61176403 Msa0175280:three_prime_UTR
TATAAGTACCTGCTGATCCT+TGG 0.476184 1_4:+61184608 None:intergenic
TAGCGTGAAATTTCTCTTGG+AGG 0.479525 1_4:-61176422 Msa0175280:three_prime_UTR
TCAATCAATGGTTCTGAAAG+AGG 0.483299 1_4:+61177492 None:intergenic
TCTCCTTGATCGTTGAACGC+TGG 0.484829 1_4:+61180147 None:intergenic
GCAGGTGATACTGCAGAACT+TGG 0.490497 1_4:-61177732 Msa0175280:CDS
AATTCTGACCCCAATTTCAA+AGG 0.495015 1_4:-61184942 Msa0175280:CDS
TAAATCACAACCAACGGCTC+TGG 0.496717 1_4:+61181460 None:intergenic
ACGGTTGTGGGATATCCTCT+TGG 0.503638 1_4:-61180560 Msa0175280:CDS
ACTTCTTGTGAATCCACATA+GGG 0.503832 1_4:+61176559 None:intergenic
CTGACCTTCATCAATATGAA+AGG 0.505131 1_4:+61177551 None:intergenic
TTACCTGTCCTTTGAAATTG+GGG 0.507312 1_4:+61184934 None:intergenic
CAAATTCCTGGTCTGGTGGT+TGG 0.509803 1_4:+61176527 None:intergenic
TGACCCCAATTTCAAAGGAC+AGG 0.510011 1_4:-61184937 Msa0175280:intron
ACAAATTGTAATTCTCTCAC+AGG 0.514924 1_4:-61177166 Msa0175280:intron
GGCCCAGCGTTCAACGATCA+AGG 0.515753 1_4:-61180150 Msa0175280:CDS
AATGCAACATACTCAATCAA+TGG 0.517559 1_4:+61177480 None:intergenic
CACGCTAACATGACATCTCC+AGG 0.520260 1_4:+61176438 None:intergenic
ATTCTCTCATTTGAGCGGAA+TGG 0.521849 1_4:+61178235 None:intergenic
TCTAAAATAATATGAGACAG+AGG 0.522377 1_4:+61176254 None:intergenic
CAACTTCAAAATTTGAAACT+GGG 0.523013 1_4:+61176497 None:intergenic
GGACTATAGGCAAGAGCTCA+TGG 0.530933 1_4:-61176222 Msa0175280:three_prime_UTR
CAGGTTACATCATATGCTCA+TGG 0.532853 1_4:-61180414 Msa0175280:CDS
AGGTGACCAACCACCAGACC+AGG 0.533734 1_4:-61176533 Msa0175280:CDS
TGGCCACGACGGATTGCTCT+GGG 0.534074 1_4:-61176476 Msa0175280:CDS
AGAAGATAACACAGAGAACA+TGG 0.534825 1_4:+61185058 None:intergenic
TGAAGATATGAGCAATCAGC+AGG 0.534944 1_4:-61176947 Msa0175280:CDS
AACGATCAAGGAGAGTGCAT+TGG 0.536494 1_4:-61180138 Msa0175280:CDS
AGGTTAAAGTCAAGAGAAGA+GGG 0.538556 1_4:-61182533 Msa0175280:CDS
ATTGATGCAGCAATAAATCC+TGG 0.539309 1_4:-61180366 Msa0175280:intron
TACTTCTTGTGAATCCACAT+AGG 0.544023 1_4:+61176558 None:intergenic
GCTGCAATGAATAGAAATGA+AGG 0.544707 1_4:+61184980 None:intergenic
TCACCAAATTCCTGGTCTGG+TGG 0.545587 1_4:+61176523 None:intergenic
GACACAATTTCAGTGACAAA+GGG 0.549526 1_4:-61180533 Msa0175280:CDS
TGACTCGAAATATGTGGCTA+AGG 0.550800 1_4:-61182508 Msa0175280:intron
TTGGGGTCAGAATTAGAAGA+AGG 0.554085 1_4:+61184951 None:intergenic
TTATTCATGTGGTCACATCA+AGG 0.554684 1_4:+61176334 None:intergenic
GTTGATGTTTCAGAATTCGT+TGG 0.555603 1_4:-61184724 Msa0175280:intron
AGATCAGAAGATCTTTCAGA+TGG 0.557002 1_4:+61176589 None:intergenic
TCACATACCAAATGAACTCG+TGG 0.559012 1_4:+61177663 None:intergenic
AGGCACGTTATTCATTTGCA+AGG 0.560334 1_4:-61177200 Msa0175280:CDS
TTGACTAATGAGGTAGTGAA+AGG 0.560509 1_4:+61178210 None:intergenic
AGATGACGATGCAGCAGCAA+CGG 0.560811 1_4:+61176633 None:intergenic
TAAGCCGGCAATAATTAAGT+AGG 0.560984 1_4:+61177524 None:intergenic
CTAAAATAATATGAGACAGA+GGG 0.564375 1_4:+61176255 None:intergenic
TTCATTTGCAAGGTTTAAAG+GGG 0.564937 1_4:-61177190 Msa0175280:CDS
GTTGTGGGATATCCTCTTGG+AGG 0.566876 1_4:-61180557 Msa0175280:CDS
TGACCTTCATCAATATGAAA+GGG 0.569231 1_4:+61177552 None:intergenic
TTGTTTGAAGGATTCTGTAA+CGG 0.572193 1_4:-61180579 Msa0175280:intron
GGTAGACTCCAAGGATCAGC+AGG 0.572458 1_4:-61184616 Msa0175280:intron
GGACTTTGTGGTAGACTCCA+AGG 0.572501 1_4:-61184625 Msa0175280:CDS
GTTGGAGCTCTCATCAAAAG+AGG 0.572525 1_4:-61184706 Msa0175280:CDS
AAAGTCCAGCAACAGTATGA+GGG 0.576815 1_4:-61176361 Msa0175280:three_prime_UTR
CAGGTTAAAGTCAAGAGAAG+AGG 0.577823 1_4:-61182534 Msa0175280:CDS
AGCTTTGATGATATACGTGT+TGG 0.579456 1_4:-61178274 Msa0175280:CDS
TTTGAAACTACAGTCTAATG+AGG 0.579854 1_4:-61178909 Msa0175280:intron
TCACCTTCACAACAGCATTG+AGG 0.583189 1_4:+61183690 None:intergenic
TTTCCTCAATGCTGTTGTGA+AGG 0.584051 1_4:-61183693 Msa0175280:intron
TTGTAAGAGTCACTCCTATG+TGG 0.586674 1_4:+61176074 None:intergenic
GAAATGAAGGGTCTCTGTGT+AGG 0.590316 1_4:+61184993 None:intergenic
AGACACAATTTCAGTGACAA+AGG 0.591490 1_4:-61180534 Msa0175280:CDS
TTTGCTTTCAGTAGAAAGCG+AGG 0.591776 1_4:-61181435 Msa0175280:CDS
TTGGCAAATGAGCTCAACAT+AGG 0.592406 1_4:-61176973 Msa0175280:CDS
CACATACCAAATGAACTCGT+GGG 0.593146 1_4:+61177664 None:intergenic
TCAGCTAAAGTTATTGGCAA+AGG 0.593749 1_4:-61177220 Msa0175280:intron
TGCAAATAATGTATTAAAGG+AGG 0.597855 1_4:-61178397 Msa0175280:intron
AAGGTCTACTGGAGGGAATG+TGG 0.599448 1_4:-61184682 Msa0175280:CDS
AGCTCTCATCAAAAGAGGAA+AGG 0.599990 1_4:-61184701 Msa0175280:CDS
AAGAGGAAAGGTCTACTGGA+GGG 0.601207 1_4:-61184689 Msa0175280:CDS
TGTATAAGTACTCCAAGACA+AGG 0.607018 1_4:+61178962 None:intergenic
AAGAGGTGTGAACACTAAGC+CGG 0.608861 1_4:+61177509 None:intergenic
AGGGGATGACTCGAAATATG+TGG 0.616639 1_4:-61182514 Msa0175280:CDS
GCAACATGAAATTATTCATG+TGG 0.623393 1_4:+61176323 None:intergenic
CAAAGCTAAATCACAACCAA+CGG 0.623701 1_4:+61181454 None:intergenic
AGGCAATTCTCTCATTTGAG+CGG 0.624954 1_4:+61178230 None:intergenic
AGATACTAGAAGGTGTGAAG+AGG 0.627683 1_4:-61185203 Msa0175280:five_prime_UTR
GGAACGTGAAGATTGTATAG+GGG 0.629382 1_4:-61177337 Msa0175280:intron
GATATACGTGTTGGATGTGA+AGG 0.631547 1_4:-61178265 Msa0175280:CDS
CCGGCAATAATTAAGTAGGA+AGG 0.633784 1_4:+61177528 None:intergenic
GGGAGTTGTATCTCGTGTAG+AGG 0.638533 1_4:-61180513 Msa0175280:intron
GGGGAAATAATAATCCACAT+AGG 0.638941 1_4:-61176088 Msa0175280:three_prime_UTR
AAGTCCAGCAACAGTATGAG+GGG 0.641776 1_4:-61176360 Msa0175280:three_prime_UTR
GAAATTGTGTCTCCTCCAAG+AGG 0.643687 1_4:+61180545 None:intergenic
CTGCAATGAATAGAAATGAA+GGG 0.646164 1_4:+61184981 None:intergenic
AAAGAGGAAAGGTCTACTGG+AGG 0.649604 1_4:-61184690 Msa0175280:CDS
TCAAGGAGAGTGCATTGGGG+TGG 0.650646 1_4:-61180133 Msa0175280:CDS
CAGAATTAGAAGAAGGAGTG+CGG 0.665220 1_4:+61184958 None:intergenic
GTATAAGTACTCCAAGACAA+GGG 0.666945 1_4:+61178963 None:intergenic
GAACTTGGTATCGTTAGAGG+CGG 0.672790 1_4:-61177717 Msa0175280:CDS
TTGCCATCTGAAAATGCTTG+AGG 0.678842 1_4:-61176304 Msa0175280:three_prime_UTR
GAGTGTGTCTACGTGAGTAG+CGG 0.691186 1_4:+61185021 None:intergenic
ATGCCCAGAGCAATCCGTCG+TGG 0.693119 1_4:+61176473 None:intergenic
CGATCAAGGAGAGTGCATTG+GGG 0.714890 1_4:-61180136 Msa0175280:CDS
GGTTAAAGTCAAGAGAAGAG+GGG 0.719322 1_4:-61182532 Msa0175280:CDS
TGAGTAGCGGAATTTGACAG+TGG 0.725425 1_4:+61185034 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTTAAAAAAAATTTAT+TGG + chr1_4:61179614-61179633 None:intergenic 0.0%
!!! TATTTTTATTTTTTATTTTT+TGG - chr1_4:61183772-61183791 Msa0175280:intron 0.0%
!!! ATTTTTATTTTTTATTTTTT+GGG - chr1_4:61183773-61183792 Msa0175280:intron 0.0%
!!! AATGATTTTATTTTAATTTC+AGG - chr1_4:61177463-61177482 Msa0175280:intron 10.0%
!!! ATGATTTTATTTTAATTTCA+GGG - chr1_4:61177464-61177483 Msa0175280:intron 10.0%
!!! TTCAATTGTTATATTTTTTT+TGG - chr1_4:61178641-61178660 Msa0175280:intron 10.0%
!!! TCAATTGTTATATTTTTTTT+GGG - chr1_4:61178642-61178661 Msa0175280:intron 10.0%
!!! TTTTATTTTTTATTTTTTGG+GGG - chr1_4:61183775-61183794 Msa0175280:intron 10.0%
!! ATAAATAATAATTCATCAAA+AGG + chr1_4:61183821-61183840 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr1_4:61177228-61177247 Msa0175280:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr1_4:61177228-61177247 Msa0175280:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr1_4:61177228-61177247 Msa0175280:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr1_4:61177228-61177247 Msa0175280:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr1_4:61177228-61177247 Msa0175280:intron 100.0%
!!! AACAAAAAAAAGTGAATTTT+GGG + chr1_4:61176339-61176358 None:intergenic 15.0%
!!! AAACAAAAAAAAGTGAATTT+TGG + chr1_4:61176340-61176359 None:intergenic 15.0%
!! TATATATTATCAAATTGACA+TGG - chr1_4:61176670-61176689 Msa0175280:CDS 15.0%
!! TAAAATAAAATCATTTGAAG+AGG + chr1_4:61177458-61177477 None:intergenic 15.0%
!!! ATTTTTAAAGTTCTTAGAAT+CGG - chr1_4:61178303-61178322 Msa0175280:intron 15.0%
!! TTTCATATATATGATTCATT+TGG + chr1_4:61178332-61178351 None:intergenic 15.0%
!!! ATAAAGTTTAAAGTCTTATT+GGG + chr1_4:61178548-61178567 None:intergenic 15.0%
!!! TATAAAGTTTAAAGTCTTAT+TGG + chr1_4:61178549-61178568 None:intergenic 15.0%
!! ACTTTATTCATTTAATTGTA+AGG - chr1_4:61178591-61178610 Msa0175280:intron 15.0%
!!! CAATTGTTATATTTTTTTTG+GGG - chr1_4:61178643-61178662 Msa0175280:intron 15.0%
!! AAAATAAATCAGCAATTATT+TGG + chr1_4:61180458-61180477 None:intergenic 15.0%
!!! AAATAATTGCTGATTTATTT+TGG - chr1_4:61180457-61180476 Msa0175280:intron 15.0%
!!! TTTTGTAAGAAAATTTAAAC+AGG + chr1_4:61180603-61180622 None:intergenic 15.0%
!! AATAATTTCTTACTTCTTTA+TGG - chr1_4:61180967-61180986 Msa0175280:intron 15.0%
!! ATAATTTCTTACTTCTTTAT+GGG - chr1_4:61180968-61180987 Msa0175280:intron 15.0%
!!! GACTATTTTTTTTTAAAACT+CGG - chr1_4:61181250-61181269 Msa0175280:intron 15.0%
!! ATTCTATTAGTTAAGAAATA+TGG - chr1_4:61181387-61181406 Msa0175280:CDS 15.0%
!! TTAAGAAATATGGTATTTAA+GGG - chr1_4:61181397-61181416 Msa0175280:CDS 15.0%
!! TATTAATTGTTGAAGTTATT+GGG + chr1_4:61182710-61182729 None:intergenic 15.0%
!! TTATTAATTGTTGAAGTTAT+TGG + chr1_4:61182711-61182730 None:intergenic 15.0%
!!! CTTCATGATATTTTTATATA+AGG + chr1_4:61183369-61183388 None:intergenic 15.0%
!! TTGCATTTATTCTTTATATA+TGG - chr1_4:61183743-61183762 Msa0175280:intron 15.0%
!!! TTTATTTTTTATTTTTTGGG+GGG - chr1_4:61183776-61183795 Msa0175280:intron 15.0%
!!! AATTTTGTTTTACTTCTTTT+CGG - chr1_4:61184200-61184219 Msa0175280:intron 15.0%
!!! ATAAAAAGTAATTTGTAAGC+AGG + chr1_4:61177559-61177578 None:intergenic 20.0%
!! ACTATATGAAGTTAAAGATA+TGG + chr1_4:61177926-61177945 None:intergenic 20.0%
!! ATATGAAATTTCCAACTAAA+AGG - chr1_4:61178344-61178363 Msa0175280:intron 20.0%
!! ATTGAAGAAAATCAAAATCA+TGG - chr1_4:61178400-61178419 Msa0175280:CDS 20.0%
!!! TAGTTACATAAATTGATAAC+AGG - chr1_4:61178445-61178464 Msa0175280:intron 20.0%
!! ACTATTATGTTATCATACTT+TGG - chr1_4:61178763-61178782 Msa0175280:intron 20.0%
!! CTATTATGTTATCATACTTT+GGG - chr1_4:61178764-61178783 Msa0175280:intron 20.0%
!!! AAGAGAAAATTGATTTCTAT+AGG - chr1_4:61178914-61178933 Msa0175280:CDS 20.0%
!!! AGAGAAAATTGATTTCTATA+GGG - chr1_4:61178915-61178934 Msa0175280:CDS 20.0%
!! GACTTTCAATATAAGTTTAT+GGG - chr1_4:61179083-61179102 Msa0175280:intron 20.0%
!! ATATCATCATAAATCAAAAC+AGG + chr1_4:61179242-61179261 None:intergenic 20.0%
!!! TGTTTTGATTTATGATGATA+TGG - chr1_4:61179241-61179260 Msa0175280:intron 20.0%
!!! AAAATCTGATTTTATATCCT+AGG + chr1_4:61179397-61179416 None:intergenic 20.0%
!! TGAAATATGAAATATTGCTT+GGG + chr1_4:61179550-61179569 None:intergenic 20.0%
!! ATGAAATATGAAATATTGCT+TGG + chr1_4:61179551-61179570 None:intergenic 20.0%
!!! TTAAGTGTTTAAAATTGGTT+AGG - chr1_4:61180094-61180113 Msa0175280:intron 20.0%
!! ACTATTTCAAATAAAGGATA+TGG + chr1_4:61180230-61180249 None:intergenic 20.0%
!! TTATTGAAACAACATAATCT+TGG + chr1_4:61180503-61180522 None:intergenic 20.0%
!! TGCTAGAAATAGTATTTAAT+TGG - chr1_4:61180538-61180557 Msa0175280:CDS 20.0%
!!! TACAAAATACTTTTGTTTGA+AGG - chr1_4:61180616-61180635 Msa0175280:intron 20.0%
!! TAAGAAATTATTTCAATGCT+GGG + chr1_4:61180959-61180978 None:intergenic 20.0%
!! GTTAAGAAATATGGTATTTA+AGG - chr1_4:61181396-61181415 Msa0175280:CDS 20.0%
!! TAATTATCATTTGTATGACT+CGG - chr1_4:61181844-61181863 Msa0175280:intron 20.0%
!! AAATAGCGTATGATATTATT+AGG + chr1_4:61182426-61182445 None:intergenic 20.0%
!! TGATGCAAATAATGTATTAA+AGG - chr1_4:61182807-61182826 Msa0175280:intron 20.0%
!!! TTATCTAAAATGTTAATTCC+TGG + chr1_4:61182883-61182902 None:intergenic 20.0%
!! TATAAAAATATCATGAAGCA+AGG - chr1_4:61183371-61183390 Msa0175280:intron 20.0%
!!! CATTTGACATTTGATTTTAT+GGG - chr1_4:61183401-61183420 Msa0175280:intron 20.0%
!!! GCAAAAAAAATTTTTCTTCA+AGG - chr1_4:61183630-61183649 Msa0175280:intron 20.0%
!!! TTATTTTTTATTTTTTGGGG+GGG - chr1_4:61183777-61183796 Msa0175280:intron 20.0%
!! AATAATAATTCATCAAAAGG+AGG + chr1_4:61183818-61183837 None:intergenic 20.0%
!! TTGCAGATTATAAAATTCAA+CGG - chr1_4:61184354-61184373 Msa0175280:intron 20.0%
!!! ATATTATTTTAGAGAAGAGA+CGG - chr1_4:61184963-61184982 Msa0175280:CDS 20.0%
! TTCAAACATAAGATACTAGA+AGG - chr1_4:61175994-61176013 Msa0175280:three_prime_UTR 25.0%
!!! TAACTTATGTTTTTTCTCTG+TGG - chr1_4:61176400-61176419 Msa0175280:three_prime_UTR 25.0%
! TAAGTCTTCAAGGAAAAATA+AGG - chr1_4:61176561-61176580 Msa0175280:CDS 25.0%
! AGAGATTTAATTACTGATGA+AGG - chr1_4:61176796-61176815 Msa0175280:intron 25.0%
! GAGATTTAATTACTGATGAA+GGG - chr1_4:61176797-61176816 Msa0175280:intron 25.0%
!!! CTAACTTGTTCTAATGTAAT+AGG + chr1_4:61176916-61176935 None:intergenic 25.0%
! CTATTACATTAGAACAAGTT+AGG - chr1_4:61176914-61176933 Msa0175280:intron 25.0%
! ATTAGAACAAGTTAGGTTTA+GGG - chr1_4:61176921-61176940 Msa0175280:intron 25.0%
!!! CTACTTTTAACTCAATTATC+AGG + chr1_4:61177036-61177055 None:intergenic 25.0%
! TATCAATTGTTTGAAGATAG+AGG + chr1_4:61177170-61177189 None:intergenic 25.0%
!!! AACTTTTTTACAAGCCTTTA+TGG - chr1_4:61177207-61177226 Msa0175280:CDS 25.0%
!!! ACTTTTTTACAAGCCTTTAT+GGG - chr1_4:61177208-61177227 Msa0175280:CDS 25.0%
!!! GTACAAGAACTTATTTTACA+AGG - chr1_4:61177355-61177374 Msa0175280:intron 25.0%
!!! AAGAACTTATTTTACAAGGT+TGG - chr1_4:61177359-61177378 Msa0175280:intron 25.0%
!!! AGAACTTATTTTACAAGGTT+GGG - chr1_4:61177360-61177379 Msa0175280:intron 25.0%
!! ATCAAGTGTTTTACAAGATT+CGG - chr1_4:61177490-61177509 Msa0175280:intron 25.0%
! ATAAAGGAAATATTTGCGTT+TGG + chr1_4:61177625-61177644 None:intergenic 25.0%
! ATTTCCTGAATTAAACTAAC+AGG - chr1_4:61178148-61178167 Msa0175280:intron 25.0%
! TACAGAAGAAATTAGAATTC+AGG + chr1_4:61178260-61178279 None:intergenic 25.0%
! ATTTATCCTCAGTAGTATAT+GGG - chr1_4:61178834-61178853 Msa0175280:intron 25.0%
! GGGTAAAAATAGGTTATAAA+TGG - chr1_4:61179007-61179026 Msa0175280:intron 25.0%
! GGACTTTCAATATAAGTTTA+TGG - chr1_4:61179082-61179101 Msa0175280:intron 25.0%
!! AATCTAAGATACTTAAAGCT+TGG - chr1_4:61179363-61179382 Msa0175280:intron 25.0%
! TTGACAATTGTATACTTGTT+TGG + chr1_4:61179641-61179660 None:intergenic 25.0%
!! GGCTATTAAGTGTTTAAAAT+TGG - chr1_4:61180089-61180108 Msa0175280:intron 25.0%
! ATAAAGGATATGGAATCTTT+AGG + chr1_4:61180220-61180239 None:intergenic 25.0%
! ACGGAAACTATTTCAAATAA+AGG + chr1_4:61180236-61180255 None:intergenic 25.0%
! ATAATAGCTAAACTATCTGA+CGG + chr1_4:61180255-61180274 None:intergenic 25.0%
! AATTATTTGGTAAGTAGAAG+TGG + chr1_4:61180445-61180464 None:intergenic 25.0%
! GTAAGAAATTATTTCAATGC+TGG + chr1_4:61180960-61180979 None:intergenic 25.0%
!!! ACTCACACTTGTTAAATTTT+AGG - chr1_4:61181024-61181043 Msa0175280:intron 25.0%
!! TGTTAAATTTTAGGCAATAG+CGG - chr1_4:61181033-61181052 Msa0175280:intron 25.0%
! TTGATGTATTAATGCTTACT+TGG - chr1_4:61181129-61181148 Msa0175280:intron 25.0%
!!! ACAAGATTATTTTAGTGTCT+AGG + chr1_4:61181220-61181239 None:intergenic 25.0%
! AGACACTAAAATAATCTTGT+TGG - chr1_4:61181220-61181239 Msa0175280:intron 25.0%
! ACTAAAATAATCTTGTTGGA+AGG - chr1_4:61181224-61181243 Msa0175280:intron 25.0%
!!! TTTTTTTAAAACTCGGTATC+CGG - chr1_4:61181257-61181276 Msa0175280:intron 25.0%
!! ACCTAACAATTTGAACTTTT+GGG - chr1_4:61181554-61181573 Msa0175280:intron 25.0%
! AATGTTTGATCAGTTAAAAC+AGG + chr1_4:61181603-61181622 None:intergenic 25.0%
! TATTCTGGATCATTTACTTA+AGG - chr1_4:61181639-61181658 Msa0175280:intron 25.0%
! ATTCTGGATCATTTACTTAA+GGG - chr1_4:61181640-61181659 Msa0175280:intron 25.0%
!! TTATCAGTAACACATTTTTC+TGG + chr1_4:61181872-61181891 None:intergenic 25.0%
! ACATTTATGCTGATATAAGA+CGG - chr1_4:61181926-61181945 Msa0175280:intron 25.0%
!!! TTAAGAAATTGGCTTGTAAA+AGG + chr1_4:61181975-61181994 None:intergenic 25.0%
!!! ATTTTAGGTGGTTAAGAAAT+TGG + chr1_4:61181986-61182005 None:intergenic 25.0%
!! ACATTAAGAACAATTTTAGG+TGG + chr1_4:61181998-61182017 None:intergenic 25.0%
!! CACACATTAAGAACAATTTT+AGG + chr1_4:61182001-61182020 None:intergenic 25.0%
!! GTTTGCATATTAAGCTTTTT+AGG + chr1_4:61182184-61182203 None:intergenic 25.0%
! CAATACCTACTTCATAAATA+TGG - chr1_4:61182535-61182554 Msa0175280:intron 25.0%
! AAACTCCATATTTATGAAGT+AGG + chr1_4:61182543-61182562 None:intergenic 25.0%
! ATAACAAAACTTCACTGATA+TGG + chr1_4:61182644-61182663 None:intergenic 25.0%
! TGCAAATAATGTATTAAAGG+AGG - chr1_4:61182810-61182829 Msa0175280:intron 25.0%
! AATTTCTACATGAAATTGTG+TGG - chr1_4:61183230-61183249 Msa0175280:intron 25.0%
! ATTTCTACATGAAATTGTGT+GGG - chr1_4:61183231-61183250 Msa0175280:intron 25.0%
!! TAATACTTCACTATCGTTTT+TGG - chr1_4:61183265-61183284 Msa0175280:intron 25.0%
!! AAAACGAATTTTTCTTTTGC+AGG + chr1_4:61183300-61183319 None:intergenic 25.0%
!!! GCATTTGACATTTGATTTTA+TGG - chr1_4:61183400-61183419 Msa0175280:intron 25.0%
! TGTATAACATTGTCATTCTA+GGG + chr1_4:61183450-61183469 None:intergenic 25.0%
!! TGTGATTTGTCATAGAAATT+TGG - chr1_4:61183562-61183581 Msa0175280:intron 25.0%
!! TTAATTATGGAACTTTTGAC+AGG - chr1_4:61183845-61183864 Msa0175280:intron 25.0%
!! TAATTATGGAACTTTTGACA+GGG - chr1_4:61183846-61183865 Msa0175280:intron 25.0%
! TATTCATTTGCAAGGTTTAA+AGG - chr1_4:61184015-61184034 Msa0175280:intron 25.0%
! ATTCATTTGCAAGGTTTAAA+GGG - chr1_4:61184016-61184035 Msa0175280:intron 25.0%
! TGTTTGATTGTATGATGTAT+AGG - chr1_4:61184104-61184123 Msa0175280:intron 25.0%
! GCAAAATGATATGATATTGT+TGG + chr1_4:61184141-61184160 None:intergenic 25.0%
!! CAACTTCAAAATTTGAAACT+GGG + chr1_4:61184713-61184732 None:intergenic 25.0%
! CTAAAATAATATGAGACAGA+GGG + chr1_4:61184955-61184974 None:intergenic 25.0%
!! TCTAAAATAATATGAGACAG+AGG + chr1_4:61184956-61184975 None:intergenic 25.0%
!!! TATTATTTTAGAGAAGAGAC+GGG - chr1_4:61184964-61184983 Msa0175280:CDS 25.0%
!! TTATCGCATATTCTGTATTT+TGG - chr1_4:61185097-61185116 Msa0175280:exon 25.0%
!! TATCGCATATTCTGTATTTT+GGG - chr1_4:61185098-61185117 Msa0175280:exon 25.0%
!!! CTCTGTTTTTGTAGTGAAAA+TGG - chr1_4:61176102-61176121 Msa0175280:three_prime_UTR 30.0%
CTGCAATGAATAGAAATGAA+GGG + chr1_4:61176229-61176248 None:intergenic 30.0%
!! TTTACCTGTCCTTTGAAATT+GGG + chr1_4:61176277-61176296 None:intergenic 30.0%
!! ATTTACCTGTCCTTTGAAAT+TGG + chr1_4:61176278-61176297 None:intergenic 30.0%
AAGTTCAAAAACAAAGTGAG+AGG + chr1_4:61176312-61176331 None:intergenic 30.0%
AAGGAAAAATAAGGACTTTG+TGG - chr1_4:61176570-61176589 Msa0175280:CDS 30.0%
!! GAAATATGGAAGTGTTATTG+TGG - chr1_4:61176747-61176766 Msa0175280:intron 30.0%
CATTAGAACAAGTTAGGTTT+AGG - chr1_4:61176920-61176939 Msa0175280:intron 30.0%
CAATTGATATAGAGCTAGTT+TGG - chr1_4:61177181-61177200 Msa0175280:CDS 30.0%
!!! CTTTTTTACAAGCCTTTATG+GGG - chr1_4:61177209-61177228 Msa0175280:CDS 30.0%
!!! TTTTTTACAAGCCTTTATGG+GGG - chr1_4:61177210-61177229 Msa0175280:CDS 30.0%
CTTACAAAGATTTAGTTGAC+GGG + chr1_4:61177324-61177343 None:intergenic 30.0%
GCTTACAAAGATTTAGTTGA+CGG + chr1_4:61177325-61177344 None:intergenic 30.0%
AATAAGTTCTTGTACGTGTA+TGG + chr1_4:61177350-61177369 None:intergenic 30.0%
!!! GAAAGAATCATTTTGGCTTA+TGG + chr1_4:61177415-61177434 None:intergenic 30.0%
! GCAAAGAGAAAGAATCATTT+TGG + chr1_4:61177422-61177441 None:intergenic 30.0%
TAAAATCATTTGAAGAGGCA+AGG + chr1_4:61177453-61177472 None:intergenic 30.0%
AGTGAATGATGATCAGATAT+GGG + chr1_4:61177778-61177797 None:intergenic 30.0%
AAGTGAATGATGATCAGATA+TGG + chr1_4:61177779-61177798 None:intergenic 30.0%
! GAAGAAGAGATACAGTTTTA+AGG + chr1_4:61177809-61177828 None:intergenic 30.0%
ACTCTTGTCTATAATGCATA+TGG - chr1_4:61177839-61177858 Msa0175280:intron 30.0%
!!! CATATGGTTTCACTTTTTAC+AGG - chr1_4:61177855-61177874 Msa0175280:intron 30.0%
! GAAGAAGAGATACAGTTTTA+AGG + chr1_4:61177809-61177828 None:intergenic 30.0%
TGAATACCATAACTGCATAA+TGG - chr1_4:61178114-61178133 Msa0175280:intron 30.0%
TTCATACCATTATGCAGTTA+TGG + chr1_4:61178123-61178142 None:intergenic 30.0%
!! AGGGATTTGTTGTGTTAATA+AGG - chr1_4:61178478-61178497 Msa0175280:intron 30.0%
!! GGGATTTGTTGTGTTAATAA+GGG - chr1_4:61178479-61178498 Msa0175280:intron 30.0%
CCTTACATTTCATTACACAT+CGG + chr1_4:61178618-61178637 None:intergenic 30.0%
!!! TTTTTTTTGGGGATAATTGC+AGG - chr1_4:61178654-61178673 Msa0175280:intron 30.0%
CATTTATCCTCAGTAGTATA+TGG - chr1_4:61178833-61178852 Msa0175280:intron 30.0%
!!! AACCTATTTTTACCCATTCA+TGG + chr1_4:61179002-61179021 None:intergenic 30.0%
ATGGGAGATTATTGTAATTC+AGG - chr1_4:61179101-61179120 Msa0175280:intron 30.0%
! TTCAAAGAAATTAGTTCTCC+TGG - chr1_4:61179193-61179212 Msa0175280:intron 30.0%
! TCAAAGAAATTAGTTCTCCT+GGG - chr1_4:61179194-61179213 Msa0175280:intron 30.0%
! CAAGTTATGCTTTGAACATA+TGG - chr1_4:61179285-61179304 Msa0175280:intron 30.0%
GGATTAATGTCCATATTACT+TGG + chr1_4:61179335-61179354 None:intergenic 30.0%
AGTATCTTAGATTAACTCGT+AGG + chr1_4:61179356-61179375 None:intergenic 30.0%
ATATACGTTATTCTCACTGA+TGG - chr1_4:61179708-61179727 Msa0175280:intron 30.0%
!!! TAGTTTTAAACCTGAAGAAC+TGG + chr1_4:61179839-61179858 None:intergenic 30.0%
TTGGATGGATGTATATAGTT+AGG - chr1_4:61179999-61180018 Msa0175280:intron 30.0%
TGGATGGATGTATATAGTTA+GGG - chr1_4:61180000-61180019 Msa0175280:intron 30.0%
AATTGTAATCCCTAACGATT+AGG + chr1_4:61180288-61180307 None:intergenic 30.0%
CTGTTCAACTATATATGCAT+GGG + chr1_4:61180317-61180336 None:intergenic 30.0%
TCTGTTCAACTATATATGCA+TGG + chr1_4:61180318-61180337 None:intergenic 30.0%
! GCATTTTCAGTTAGTTCATA+TGG - chr1_4:61180378-61180397 Msa0175280:CDS 30.0%
! AACAACATAATCTTGGTAGT+TGG + chr1_4:61180496-61180515 None:intergenic 30.0%
TTGTTTGAAGGATTCTGTAA+CGG - chr1_4:61180628-61180647 Msa0175280:intron 30.0%
GCTGAATAAAAATTGTAACC+AGG - chr1_4:61180774-61180793 Msa0175280:intron 30.0%
! CACTTTTAGATATACTTACC+AGG + chr1_4:61180862-61180881 None:intergenic 30.0%
CTGGTAAGTATATCTAAAAG+TGG - chr1_4:61180860-61180879 Msa0175280:intron 30.0%
ATAAACAGAGAAAATCAGAG+AGG + chr1_4:61180906-61180925 None:intergenic 30.0%
TTAATACATCAACTAACAGC+AGG + chr1_4:61181121-61181140 None:intergenic 30.0%
CATGTATACTTATGTGTGAA+AGG - chr1_4:61181152-61181171 Msa0175280:intron 30.0%
TACCTTGTGCTTAAAAAATG+TGG + chr1_4:61181432-61181451 None:intergenic 30.0%
!!! ACATTTTTTAAGCACAAGGT+AGG - chr1_4:61181431-61181450 Msa0175280:CDS 30.0%
!!! CATTTTTTAAGCACAAGGTA+GGG - chr1_4:61181432-61181451 Msa0175280:CDS 30.0%
!!! ATTTTTTAAGCACAAGGTAG+GGG - chr1_4:61181433-61181452 Msa0175280:CDS 30.0%
! CACCTAACAATTTGAACTTT+TGG - chr1_4:61181553-61181572 Msa0175280:intron 30.0%
! CCTAACAATTTGAACTTTTG+GGG - chr1_4:61181555-61181574 Msa0175280:intron 30.0%
! CTAACAATTTGAACTTTTGG+GGG - chr1_4:61181556-61181575 Msa0175280:intron 30.0%
TCAGTTAAAACAGGATTATC+TGG + chr1_4:61181594-61181613 None:intergenic 30.0%
!! CATTACGTTGTTTTCTATTC+TGG - chr1_4:61181624-61181643 Msa0175280:intron 30.0%
AAATGAGATACAACTGTTGA+TGG + chr1_4:61181721-61181740 None:intergenic 30.0%
TACTGGTAAGAAATGTTAAC+TGG - chr1_4:61181771-61181790 Msa0175280:intron 30.0%
CATTTATGCTGATATAAGAC+GGG - chr1_4:61181927-61181946 Msa0175280:intron 30.0%
ATTTATGCTGATATAAGACG+GGG - chr1_4:61181928-61181947 Msa0175280:intron 30.0%
! TGTATTGGCATAACAGAAAT+TGG + chr1_4:61182051-61182070 None:intergenic 30.0%
GATCAACAGATTCAATGTAT+TGG + chr1_4:61182066-61182085 None:intergenic 30.0%
!! TGCATATTAAGCTTTTTAGG+AGG + chr1_4:61182181-61182200 None:intergenic 30.0%
! AAAACTATGTTTTCACTCCT+AGG - chr1_4:61182218-61182237 Msa0175280:intron 30.0%
! TTTGAAACTACAGTCTAATG+AGG - chr1_4:61182298-61182317 Msa0175280:intron 30.0%
GAGATTATTTGTTTGAACAC+TGG - chr1_4:61182334-61182353 Msa0175280:intron 30.0%
AAGTTATTGGGTTTGAGTAA+GGG + chr1_4:61182698-61182717 None:intergenic 30.0%
ACATTATTTGCATCAGAAGT+TGG + chr1_4:61182802-61182821 None:intergenic 30.0%
ATTGTTGAATGTGAATTCTG+AGG - chr1_4:61182840-61182859 Msa0175280:intron 30.0%
ATGTTAATTCCTGGTACAAT+GGG + chr1_4:61182874-61182893 None:intergenic 30.0%
AATGTTAATTCCTGGTACAA+TGG + chr1_4:61182875-61182894 None:intergenic 30.0%
TAGATAAATCTTGCCATTAC+AGG - chr1_4:61182896-61182915 Msa0175280:intron 30.0%
AGATAAATCTTGCCATTACA+GGG - chr1_4:61182897-61182916 Msa0175280:intron 30.0%
! AACACATATTGCAAAAGCAT+TGG + chr1_4:61183206-61183225 None:intergenic 30.0%
TTTCTACATGAAATTGTGTG+GGG - chr1_4:61183232-61183251 Msa0175280:intron 30.0%
!! ACTATCGTTTTTGGAAACTA+GGG - chr1_4:61183274-61183293 Msa0175280:intron 30.0%
ACTCTTATATGTTTGCTTTG+TGG - chr1_4:61183331-61183350 Msa0175280:intron 30.0%
TTCCATCCTAAGGATATAAA+TGG + chr1_4:61183427-61183446 None:intergenic 30.0%
CTGTATAACATTGTCATTCT+AGG + chr1_4:61183451-61183470 None:intergenic 30.0%
ACAATGTTATACAGATTTGC+AGG - chr1_4:61183457-61183476 Msa0175280:intron 30.0%
TGACCTTCATCAATATGAAA+GGG + chr1_4:61183658-61183677 None:intergenic 30.0%
AATGCAACATACTCAATCAA+TGG + chr1_4:61183730-61183749 None:intergenic 30.0%
TCATGATCAGCTAAAGTTAT+TGG - chr1_4:61183981-61184000 Msa0175280:intron 30.0%
TTCATTTGCAAGGTTTAAAG+GGG - chr1_4:61184017-61184036 Msa0175280:intron 30.0%
ACAAATTGTAATTCTCTCAC+AGG - chr1_4:61184041-61184060 Msa0175280:intron 30.0%
AAAAGAAAATGATCGCACAA+TGG + chr1_4:61184446-61184465 None:intergenic 30.0%
! CCAACTTCAAAATTTGAAAC+TGG + chr1_4:61184714-61184733 None:intergenic 30.0%
!!! CCAGTTTCAAATTTTGAAGT+TGG - chr1_4:61184711-61184730 Msa0175280:CDS 30.0%
! AAGCATATGGTCACAATTTT+TGG - chr1_4:61184817-61184836 Msa0175280:intron 30.0%
GCAACATGAAATTATTCATG+TGG + chr1_4:61184887-61184906 None:intergenic 30.0%
! ACTCCTTGATTTGATAAACT+TGG - chr1_4:61185044-61185063 Msa0175280:CDS 30.0%
CTTCCAAGTTTATCAAATCA+AGG + chr1_4:61185050-61185069 None:intergenic 30.0%
! ATCGCATATTCTGTATTTTG+GGG - chr1_4:61185099-61185118 Msa0175280:exon 30.0%
AGAAGATAACACAGAGAACA+TGG + chr1_4:61176152-61176171 None:intergenic 35.0%
GCTGCAATGAATAGAAATGA+AGG + chr1_4:61176230-61176249 None:intergenic 35.0%
AATTCTGACCCCAATTTCAA+AGG - chr1_4:61176265-61176284 Msa0175280:three_prime_UTR 35.0%
!! TTACCTGTCCTTTGAAATTG+GGG + chr1_4:61176276-61176295 None:intergenic 35.0%
GTTGATGTTTCAGAATTCGT+TGG - chr1_4:61176483-61176502 Msa0175280:CDS 35.0%
CTTGAAGACTTAAAAGAAGC+TGG + chr1_4:61176553-61176572 None:intergenic 35.0%
!! CAGCTTCTTTTAAGTCTTCA+AGG - chr1_4:61176551-61176570 Msa0175280:CDS 35.0%
GTTGCATTTGTCTGGAAATA+TGG - chr1_4:61176733-61176752 Msa0175280:intron 35.0%
! AGGACCTGAGATTATCTTTT+CGG - chr1_4:61176876-61176895 Msa0175280:intron 35.0%
!!! TCTTTTCGGGTCATGTTATT+CGG - chr1_4:61176890-61176909 Msa0175280:intron 35.0%
! TCAACGTCAAGTCACTATTT+TGG - chr1_4:61176969-61176988 Msa0175280:CDS 35.0%
! CAACGTCAAGTCACTATTTT+GGG - chr1_4:61176970-61176989 Msa0175280:CDS 35.0%
TACTCCTATCCAAGGTTATA+AGG + chr1_4:61177143-61177162 None:intergenic 35.0%
! TTTTTACAAGCCTTTATGGG+GGG - chr1_4:61177211-61177230 Msa0175280:CDS 35.0%
!!! AGAATCATTTTGGCTTATGG+CGG + chr1_4:61177412-61177431 None:intergenic 35.0%
!! TTTTGTTTCAGAGACCCTTA+AGG - chr1_4:61177578-61177597 Msa0175280:intron 35.0%
TTTGTTTCAGAGACCCTTAA+GGG - chr1_4:61177579-61177598 Msa0175280:intron 35.0%
! GCGTTTGGATTTTGAATTTG+AGG + chr1_4:61177610-61177629 None:intergenic 35.0%
ATAATTGAGGCATGGCATAA+AGG + chr1_4:61177641-61177660 None:intergenic 35.0%
ACAGATGTCAGACATAATTG+AGG + chr1_4:61177654-61177673 None:intergenic 35.0%
GCTGAAAATGTGTATAAGAG+CGG + chr1_4:61177971-61177990 None:intergenic 35.0%
AGTAAACCTAAGGATGAAAC+AGG + chr1_4:61178019-61178038 None:intergenic 35.0%
!!! AATTGTCTCTGTTTTTGCCA+GGG + chr1_4:61178071-61178090 None:intergenic 35.0%
! CTAACTTTCTGCCTTTTAGT+TGG + chr1_4:61178358-61178377 None:intergenic 35.0%
CAACTAAAAGGCAGAAAGTT+AGG - chr1_4:61178356-61178375 Msa0175280:intron 35.0%
! CATAAATTGATAACAGGCAC+TGG - chr1_4:61178451-61178470 Msa0175280:intron 35.0%
CCGATGTGTAATGAAATGTA+AGG - chr1_4:61178615-61178634 Msa0175280:intron 35.0%
AGGTTAAAGTCAAGAGAAGA+GGG - chr1_4:61178674-61178693 Msa0175280:intron 35.0%
AGCCATGAATGGGTAAAAAT+AGG - chr1_4:61178997-61179016 Msa0175280:intron 35.0%
GTGACAATAGCCAAGTAATA+TGG - chr1_4:61179322-61179341 Msa0175280:intron 35.0%
CAATAGAAGACTCTTAGACA+TGG - chr1_4:61179658-61179677 Msa0175280:intron 35.0%
CAAAGCTAAATCACAACCAA+CGG + chr1_4:61179756-61179775 None:intergenic 35.0%
GATGTGGAACCTCTTAAATT+TGG - chr1_4:61179806-61179825 Msa0175280:intron 35.0%
TTGTTGAAGTCAAAGTGAAC+TGG - chr1_4:61179945-61179964 Msa0175280:intron 35.0%
TGTTGAAGTCAAAGTGAACT+GGG - chr1_4:61179946-61179965 Msa0175280:intron 35.0%
TGATGTATGAACACTCTCAA+AGG - chr1_4:61179973-61179992 Msa0175280:intron 35.0%
GATGTATGAACACTCTCAAA+GGG - chr1_4:61179974-61179993 Msa0175280:intron 35.0%
ATGGATGTATATAGTTAGGG+TGG - chr1_4:61180003-61180022 Msa0175280:intron 35.0%
! TGCTAGTCGTACTTTCTTTT+TGG - chr1_4:61180068-61180087 Msa0175280:intron 35.0%
!! TCTTTAGGAACGGTGTATTT+TGG + chr1_4:61180205-61180224 None:intergenic 35.0%
! GGATATGGAATCTTTAGGAA+CGG + chr1_4:61180215-61180234 None:intergenic 35.0%
ATGTATTGCTCCTAATCGTT+AGG - chr1_4:61180275-61180294 Msa0175280:intron 35.0%
TGTATTGCTCCTAATCGTTA+GGG - chr1_4:61180276-61180295 Msa0175280:intron 35.0%
TATTTGGTAAGTAGAAGTGG+TGG + chr1_4:61180442-61180461 None:intergenic 35.0%
! CATAATCTTGGTAGTTGGTA+TGG + chr1_4:61180491-61180510 None:intergenic 35.0%
GCAACTGAGAACTAAAATCT+CGG + chr1_4:61180756-61180775 None:intergenic 35.0%
ATTGATGCAGCAATAAATCC+TGG - chr1_4:61180841-61180860 Msa0175280:intron 35.0%
GAAATTATTTCAATGCTGGG+TGG + chr1_4:61180956-61180975 None:intergenic 35.0%
! TAAATTTTAGGCAATAGCGG+AGG - chr1_4:61181036-61181055 Msa0175280:intron 35.0%
!! GGCATTTCAGGTAGATTTTA+TGG - chr1_4:61181095-61181114 Msa0175280:intron 35.0%
ACAAGTTAAAAGCTATGCTC+TGG + chr1_4:61181354-61181373 None:intergenic 35.0%
!!! CTCCACATTTTTTAAGCACA+AGG - chr1_4:61181427-61181446 Msa0175280:CDS 35.0%
!!! TTTTTTAAGCACAAGGTAGG+GGG - chr1_4:61181434-61181453 Msa0175280:CDS 35.0%
CTTCAAGCCAAAAGAACATT+CGG - chr1_4:61181475-61181494 Msa0175280:intron 35.0%
TTCAAGCCAAAAGAACATTC+GGG - chr1_4:61181476-61181495 Msa0175280:intron 35.0%
GTTAGGTGAAAGATTGTGAA+AGG + chr1_4:61181541-61181560 None:intergenic 35.0%
CCCCAAAAGTTCAAATTGTT+AGG + chr1_4:61181558-61181577 None:intergenic 35.0%
TTAAAACAGGATTATCTGGC+AGG + chr1_4:61181590-61181609 None:intergenic 35.0%
TCTGAAGATGCTGAGAATAT+TGG - chr1_4:61181685-61181704 Msa0175280:intron 35.0%
GAAAAGAATGGCAAGTATAC+TGG - chr1_4:61181754-61181773 Msa0175280:intron 35.0%
TGGTAAGAAATGTTAACTGG+AGG - chr1_4:61181774-61181793 Msa0175280:intron 35.0%
TGTGAATTCTAGCATGTATC+TGG - chr1_4:61182094-61182113 Msa0175280:intron 35.0%
!! ATTAAGCTTTTTAGGAGGCT+TGG + chr1_4:61182176-61182195 None:intergenic 35.0%
GCTTAATATGCAAACTATGC+TGG - chr1_4:61182189-61182208 Msa0175280:intron 35.0%
GTATAAGTACTCCAAGACAA+GGG + chr1_4:61182247-61182266 None:intergenic 35.0%
TGTATAAGTACTCCAAGACA+AGG + chr1_4:61182248-61182267 None:intergenic 35.0%
CTAATGAGGTATGTTATGCA+TGG - chr1_4:61182312-61182331 Msa0175280:intron 35.0%
! AAAGAGAAGTGCACAAGAAA+AGG + chr1_4:61182484-61182503 None:intergenic 35.0%
ATGGTGTATCATGATGAGAT+GGG + chr1_4:61182625-61182644 None:intergenic 35.0%
TATGGTGTATCATGATGAGA+TGG + chr1_4:61182626-61182645 None:intergenic 35.0%
GAAGTTATTGGGTTTGAGTA+AGG + chr1_4:61182699-61182718 None:intergenic 35.0%
! TTTTTCACTCTTTGTCTTGC+AGG - chr1_4:61182753-61182772 Msa0175280:intron 35.0%
! TTTTCACTCTTTGTCTTGCA+GGG - chr1_4:61182754-61182773 Msa0175280:intron 35.0%
! AGCTTTGATGATATACGTGT+TGG - chr1_4:61182933-61182952 Msa0175280:intron 35.0%
TTGACTAATGAGGTAGTGAA+AGG + chr1_4:61183000-61183019 None:intergenic 35.0%
!! GCTCTTACTTTTGACTAATG+AGG + chr1_4:61183010-61183029 None:intergenic 35.0%
!! CACTATCGTTTTTGGAAACT+AGG - chr1_4:61183273-61183292 Msa0175280:intron 35.0%
TATGGGCCATTTATATCCTT+AGG - chr1_4:61183418-61183437 Msa0175280:intron 35.0%
TTTAAACCCACGAGTTCATT+TGG - chr1_4:61183537-61183556 Msa0175280:intron 35.0%
GCATCAGATCAATAGAATCA+TGG + chr1_4:61183600-61183619 None:intergenic 35.0%
GTTCCCTTTCATATTGATGA+AGG - chr1_4:61183652-61183671 Msa0175280:intron 35.0%
CTGACCTTCATCAATATGAA+AGG + chr1_4:61183659-61183678 None:intergenic 35.0%
CCTTCCTACTTAATTATTGC+CGG - chr1_4:61183679-61183698 Msa0175280:intron 35.0%
TAAGCCGGCAATAATTAAGT+AGG + chr1_4:61183686-61183705 None:intergenic 35.0%
!! TCAATCAATGGTTCTGAAAG+AGG + chr1_4:61183718-61183737 None:intergenic 35.0%
!!! TTTTTTATTTTTTGGGGGGG+TGG - chr1_4:61183780-61183799 Msa0175280:intron 35.0%
!!! TTTTTATTTTTTGGGGGGGT+GGG - chr1_4:61183781-61183800 Msa0175280:intron 35.0%
AGGAACGTGAAGATTGTATA+GGG - chr1_4:61183869-61183888 Msa0175280:intron 35.0%
!! TTTTCCAGCTTTGTGCTTTA+AGG + chr1_4:61183919-61183938 None:intergenic 35.0%
TCAGCTAAAGTTATTGGCAA+AGG - chr1_4:61183987-61184006 Msa0175280:intron 35.0%
ATTGTAATTCTCTCACAGGT+TGG - chr1_4:61184045-61184064 Msa0175280:intron 35.0%
AGATCAGAAGATCTTTCAGA+TGG + chr1_4:61184621-61184640 None:intergenic 35.0%
ACTTCTTGTGAATCCACATA+GGG + chr1_4:61184651-61184670 None:intergenic 35.0%
TACTTCTTGTGAATCCACAT+AGG + chr1_4:61184652-61184671 None:intergenic 35.0%
TGTTAGCGTGAAATTTCTCT+TGG - chr1_4:61184782-61184801 Msa0175280:intron 35.0%
GTGACCATATGCTTCAAATA+TGG + chr1_4:61184811-61184830 None:intergenic 35.0%
!! CATATGGTCACAATTTTTGG+CGG - chr1_4:61184820-61184839 Msa0175280:intron 35.0%
TTATTCATGTGGTCACATCA+AGG + chr1_4:61184876-61184895 None:intergenic 35.0%
!! TCGCATATTCTGTATTTTGG+GGG - chr1_4:61185100-61185119 Msa0175280:exon 35.0%
GGGGAAATAATAATCCACAT+AGG - chr1_4:61185119-61185138 Msa0175280:five_prime_UTR 35.0%
! AGATACTAGAAGGTGTGAAG+AGG - chr1_4:61176004-61176023 Msa0175280:three_prime_UTR 40.0%
CAGAATTAGAAGAAGGAGTG+CGG + chr1_4:61176252-61176271 None:intergenic 40.0%
TTGGGGTCAGAATTAGAAGA+AGG + chr1_4:61176259-61176278 None:intergenic 40.0%
AGCTCTCATCAAAAGAGGAA+AGG - chr1_4:61176506-61176525 Msa0175280:CDS 40.0%
TCAAAAGAGGAAAGGTCTAC+TGG - chr1_4:61176514-61176533 Msa0175280:CDS 40.0%
TATAAGTACCTGCTGATCCT+TGG + chr1_4:61176602-61176621 None:intergenic 40.0%
GTGAATGTGTTGCATTTGTC+TGG - chr1_4:61176725-61176744 Msa0175280:intron 40.0%
TTACTGATGAAGGGTTCGTT+TGG - chr1_4:61176806-61176825 Msa0175280:intron 40.0%
!!! GGTTTGTCTGGAGTTTTAAG+GGG + chr1_4:61176849-61176868 None:intergenic 40.0%
!! GGGTTTGTCTGGAGTTTTAA+GGG + chr1_4:61176850-61176869 None:intergenic 40.0%
!! AGGGTTTGTCTGGAGTTTTA+AGG + chr1_4:61176851-61176870 None:intergenic 40.0%
TAATCTCAGGTCCTATCTCA+GGG + chr1_4:61176870-61176889 None:intergenic 40.0%
ATAATCTCAGGTCCTATCTC+AGG + chr1_4:61176871-61176890 None:intergenic 40.0%
! GGACCTGAGATTATCTTTTC+GGG - chr1_4:61176877-61176896 Msa0175280:intron 40.0%
TGACCCGAAAAGATAATCTC+AGG + chr1_4:61176883-61176902 None:intergenic 40.0%
TTCTTGTCAACGAAACCAGT+AGG - chr1_4:61177061-61177080 Msa0175280:intron 40.0%
! AACACCGTTGACAGAGTATT+CGG - chr1_4:61177088-61177107 Msa0175280:intron 40.0%
TGAACCGAATACTCTGTCAA+CGG + chr1_4:61177095-61177114 None:intergenic 40.0%
!!! GGTTCAATTTCTAGCGCTTT+TGG - chr1_4:61177109-61177128 Msa0175280:intron 40.0%
CATGCCTTATAACCTTGGAT+AGG - chr1_4:61177136-61177155 Msa0175280:intron 40.0%
! TTTTACAAGCCTTTATGGGG+GGG - chr1_4:61177212-61177231 Msa0175280:CDS 40.0%
TTTCCTCAATGCTGTTGTGA+AGG - chr1_4:61177514-61177533 Msa0175280:CDS 40.0%
! ATTTGAGGTGCAACCCTTAA+GGG + chr1_4:61177595-61177614 None:intergenic 40.0%
! AATTTGAGGTGCAACCCTTA+AGG + chr1_4:61177596-61177615 None:intergenic 40.0%
TGTCAGACATAATTGAGGCA+TGG + chr1_4:61177649-61177668 None:intergenic 40.0%
! GACATCTGTGTTTCTGTTGT+TGG - chr1_4:61177665-61177684 Msa0175280:intron 40.0%
TCTTGTCCTTGAAGCTTTCA+TGG - chr1_4:61177689-61177708 Msa0175280:CDS 40.0%
ACAAAGAGAAACTGCGTGTA+AGG + chr1_4:61177996-61178015 None:intergenic 40.0%
CTTTGTCCTGTTTCATCCTT+AGG - chr1_4:61178010-61178029 Msa0175280:intron 40.0%
!!! GAATTGTCTCTGTTTTTGCC+AGG + chr1_4:61178072-61178091 None:intergenic 40.0%
! GTGGCCTGTTAGTTTAATTC+AGG + chr1_4:61178155-61178174 None:intergenic 40.0%
CTTTGCAGTGCGTTTATGAT+TGG - chr1_4:61178178-61178197 Msa0175280:intron 40.0%
ATTAACCAACGCACATTGTG+TGG - chr1_4:61178213-61178232 Msa0175280:CDS 40.0%
!! TGATAACAGGCACTGGATAT+AGG - chr1_4:61178458-61178477 Msa0175280:intron 40.0%
!! GATAACAGGCACTGGATATA+GGG - chr1_4:61178459-61178478 Msa0175280:intron 40.0%
CAGGTTAAAGTCAAGAGAAG+AGG - chr1_4:61178673-61178692 Msa0175280:intron 40.0%
GGTTAAAGTCAAGAGAAGAG+GGG - chr1_4:61178675-61178694 Msa0175280:intron 40.0%
TGACTCGAAATATGTGGCTA+AGG - chr1_4:61178699-61178718 Msa0175280:intron 40.0%
CAATACACCTCTATCATGAC+AGG + chr1_4:61178729-61178748 None:intergenic 40.0%
CTTAGCATATCTGACTGAGT+AGG - chr1_4:61178803-61178822 Msa0175280:intron 40.0%
TCTAGTCCCATATACTACTG+AGG + chr1_4:61178843-61178862 None:intergenic 40.0%
AGTGCATGTTAGCCATGAAT+GGG - chr1_4:61178987-61179006 Msa0175280:intron 40.0%
! AAAGCTTGGAAGTTGATCCT+AGG - chr1_4:61179377-61179396 Msa0175280:intron 40.0%
TGAAATATTGCTTGGGACCT+TGG + chr1_4:61179543-61179562 None:intergenic 40.0%
TTCTCACTGATGGAATGTAC+AGG - chr1_4:61179718-61179737 Msa0175280:intron 40.0%
TTTGCTTTCAGTAGAAAGCG+AGG - chr1_4:61179772-61179791 Msa0175280:intron 40.0%
GGCAAACGTCCAAATTTAAG+AGG + chr1_4:61179818-61179837 None:intergenic 40.0%
! GAGTTTGCTTCTTTCTGCTT+TGG - chr1_4:61179889-61179908 Msa0175280:intron 40.0%
! TCGTCTCTAGTGTCATTGTT+AGG - chr1_4:61180039-61180058 Msa0175280:intron 40.0%
! AAGTAGAAGTGGTGGAGAAT+AGG + chr1_4:61180434-61180453 None:intergenic 40.0%
AAGGATTCTGTAACGGTTGT+GGG - chr1_4:61180635-61180654 Msa0175280:intron 40.0%
CATGAGCATATGATGTAACC+TGG + chr1_4:61180795-61180814 None:intergenic 40.0%
CAGGTTACATCATATGCTCA+TGG - chr1_4:61180793-61180812 Msa0175280:intron 40.0%
AACAGAGAAAATCAGAGAGG+AGG + chr1_4:61180903-61180922 None:intergenic 40.0%
TGGGTGGCAGAAATACTATT+TGG + chr1_4:61180940-61180959 None:intergenic 40.0%
!!! GCTATGCTCTGGCTTTTAAA+TGG + chr1_4:61181343-61181362 None:intergenic 40.0%
!! TTTTTAAGCACAAGGTAGGG+GGG - chr1_4:61181435-61181454 Msa0175280:CDS 40.0%
TCAAGCCAAAAGAACATTCG+GGG - chr1_4:61181477-61181496 Msa0175280:intron 40.0%
!! ATTTGAACTTTTGGGGGAGT+TGG - chr1_4:61181562-61181581 Msa0175280:intron 40.0%
ACTTAAGGGACAATGCTTCT+AGG - chr1_4:61181654-61181673 Msa0175280:intron 40.0%
CTGACTGACTACGAAAAGAA+TGG - chr1_4:61181742-61181761 Msa0175280:intron 40.0%
AGAAATGTTAACTGGAGGCA+TGG - chr1_4:61181779-61181798 Msa0175280:intron 40.0%
TTGTAAAAGGCAATGTGCAC+AGG + chr1_4:61181962-61181981 None:intergenic 40.0%
TATGTGAATAACAGCCGTTC+TGG + chr1_4:61182372-61182391 None:intergenic 40.0%
GGCTGTTATTCACATATACG+TGG - chr1_4:61182376-61182395 Msa0175280:intron 40.0%
GTTTGCTCATCAAGTTTGTG+AGG - chr1_4:61182458-61182477 Msa0175280:intron 40.0%
! CTTCTCTTTCATTTTCTCCG+TGG - chr1_4:61182495-61182514 Msa0175280:intron 40.0%
CAAAACCAATAGTAGTGCCA+CGG + chr1_4:61182515-61182534 None:intergenic 40.0%
! TGGAGTTTTTAACCATCCCA+TGG - chr1_4:61182555-61182574 Msa0175280:intron 40.0%
GAGTGAAGAGAAATCACCAT+GGG + chr1_4:61182574-61182593 None:intergenic 40.0%
ATCACCATCAATATGAGCCA+TGG + chr1_4:61182596-61182615 None:intergenic 40.0%
ACAATCACATCACCCTGTAA+TGG + chr1_4:61182912-61182931 None:intergenic 40.0%
GATATACGTGTTGGATGTGA+AGG - chr1_4:61182942-61182961 Msa0175280:intron 40.0%
ATTCTCTCATTTGAGCGGAA+TGG + chr1_4:61182975-61182994 None:intergenic 40.0%
AGGCAATTCTCTCATTTGAG+CGG + chr1_4:61182980-61182999 None:intergenic 40.0%
GGCCATTTATATCCTTAGGA+TGG - chr1_4:61183422-61183441 Msa0175280:intron 40.0%
CACATACCAAATGAACTCGT+GGG + chr1_4:61183546-61183565 None:intergenic 40.0%
TCACATACCAAATGAACTCG+TGG + chr1_4:61183547-61183566 None:intergenic 40.0%
CCGGCAATAATTAAGTAGGA+AGG + chr1_4:61183682-61183701 None:intergenic 40.0%
!!! TTTTATTTTTTGGGGGGGTG+GGG - chr1_4:61183782-61183801 Msa0175280:intron 40.0%
! TTATGGAACTTTTGACAGGG+AGG - chr1_4:61183849-61183868 Msa0175280:intron 40.0%
GAGGAACGTGAAGATTGTAT+AGG - chr1_4:61183868-61183887 Msa0175280:intron 40.0%
GGAACGTGAAGATTGTATAG+GGG - chr1_4:61183870-61183889 Msa0175280:intron 40.0%
!!! AGGGGTGAGTTTTGAATTTG+TGG - chr1_4:61183888-61183907 Msa0175280:intron 40.0%
!! TTAGCCTTAAAGCACAAAGC+TGG - chr1_4:61183912-61183931 Msa0175280:intron 40.0%
AGGCACGTTATTCATTTGCA+AGG - chr1_4:61184007-61184026 Msa0175280:intron 40.0%
! TTACTTCTTTTCGGATCGAC+AGG - chr1_4:61184209-61184228 Msa0175280:intron 40.0%
TTGGCAAATGAGCTCAACAT+AGG - chr1_4:61184234-61184253 Msa0175280:intron 40.0%
TGAAGATATGAGCAATCAGC+AGG - chr1_4:61184260-61184279 Msa0175280:intron 40.0%
CAATGAGATGAGCAAGATGA+TGG + chr1_4:61184398-61184417 None:intergenic 40.0%
! TTCTTTTGCGATGTGTCTCA+TGG - chr1_4:61184459-61184478 Msa0175280:intron 40.0%
GCTGAAAAGGAGAAAAGCAA+TGG + chr1_4:61184489-61184508 None:intergenic 40.0%
! TTTCTCCTTTTCAGCATGCA+AGG - chr1_4:61184494-61184513 Msa0175280:intron 40.0%
TTTGTCCTTGCATGCTGAAA+AGG + chr1_4:61184502-61184521 None:intergenic 40.0%
!! AGATTGCTATGCTGCTGTTT+TGG - chr1_4:61184542-61184561 Msa0175280:intron 40.0%
TCATCTTTGCTGAGAGACTA+TGG - chr1_4:61184591-61184610 Msa0175280:intron 40.0%
! TGATCTTTTGCAACCCTATG+TGG - chr1_4:61184635-61184654 Msa0175280:CDS 40.0%
GTGGATTCACAAGAAGTAGA+AGG - chr1_4:61184654-61184673 Msa0175280:CDS 40.0%
!!! AATTTTGAAGTTGGCCACGA+CGG - chr1_4:61184720-61184739 Msa0175280:intron 40.0%
! GGGCATAATGAATTTTCACC+TGG - chr1_4:61184751-61184770 Msa0175280:intron 40.0%
TAGCGTGAAATTTCTCTTGG+AGG - chr1_4:61184785-61184804 Msa0175280:intron 40.0%
! GAGGCCATATTTGAAGCATA+TGG - chr1_4:61184804-61184823 Msa0175280:intron 40.0%
AAAAGTCCAGCAACAGTATG+AGG - chr1_4:61184845-61184864 Msa0175280:intron 40.0%
AAAGTCCAGCAACAGTATGA+GGG - chr1_4:61184846-61184865 Msa0175280:intron 40.0%
TTGCCATCTGAAAATGCTTG+AGG - chr1_4:61184903-61184922 Msa0175280:intron 40.0%
TTGTAAGAGTCACTCCTATG+TGG + chr1_4:61185136-61185155 None:intergenic 40.0%
! TGAGTAGCGGAATTTGACAG+TGG + chr1_4:61176176-61176195 None:intergenic 45.0%
GAAATGAAGGGTCTCTGTGT+AGG + chr1_4:61176217-61176236 None:intergenic 45.0%
TGACCCCAATTTCAAAGGAC+AGG - chr1_4:61176270-61176289 Msa0175280:three_prime_UTR 45.0%
GTTGGAGCTCTCATCAAAAG+AGG - chr1_4:61176501-61176520 Msa0175280:CDS 45.0%
AAAGAGGAAAGGTCTACTGG+AGG - chr1_4:61176517-61176536 Msa0175280:CDS 45.0%
AAGAGGAAAGGTCTACTGGA+GGG - chr1_4:61176518-61176537 Msa0175280:CDS 45.0%
TGATGAAGGGTTCGTTTGGA+AGG - chr1_4:61176810-61176829 Msa0175280:intron 45.0%
GATGAAGGGTTCGTTTGGAA+GGG - chr1_4:61176811-61176830 Msa0175280:intron 45.0%
!!! CAATTTCTAGCGCTTTTGGC+TGG - chr1_4:61177113-61177132 Msa0175280:intron 45.0%
GAGGAAGTTACTCCTATCCA+AGG + chr1_4:61177151-61177170 None:intergenic 45.0%
TTTACAAGCCTTTATGGGGG+GGG - chr1_4:61177213-61177232 Msa0175280:CDS 45.0%
GAAATCAACTTATGCACGCC+AGG - chr1_4:61177286-61177305 Msa0175280:intron 45.0%
! GACGGGACTTCTAAAAAACC+TGG + chr1_4:61177307-61177326 None:intergenic 45.0%
TCACCTTCACAACAGCATTG+AGG + chr1_4:61177520-61177539 None:intergenic 45.0%
GACATGCCATGAAAGCTTCA+AGG + chr1_4:61177698-61177717 None:intergenic 45.0%
AGCTTTCATGGCATGTCTCT+AGG - chr1_4:61177701-61177720 Msa0175280:CDS 45.0%
GTATGCGTGCAGTAAACCTA+AGG + chr1_4:61178029-61178048 None:intergenic 45.0%
CTCCAGATTATTCACTTCCC+TGG - chr1_4:61178051-61178070 Msa0175280:intron 45.0%
TGCCAGGGAAGTGAATAATC+TGG + chr1_4:61178056-61178075 None:intergenic 45.0%
CAGAGACAATTCACAAGCAC+TGG - chr1_4:61178080-61178099 Msa0175280:intron 45.0%
!! GACAATTCACAAGCACTGGA+AGG - chr1_4:61178084-61178103 Msa0175280:intron 45.0%
TAAACGCACTGCAAAGCATG+TGG + chr1_4:61178174-61178193 None:intergenic 45.0%
TGCAGTGCGTTTATGATTGG+AGG - chr1_4:61178181-61178200 Msa0175280:intron 45.0%
TTGTGTGGAGCATGATACAC+AGG - chr1_4:61178228-61178247 Msa0175280:CDS 45.0%
AGGGGATGACTCGAAATATG+TGG - chr1_4:61178693-61178712 Msa0175280:intron 45.0%
AGGTATGCCTGTCATGATAG+AGG - chr1_4:61178719-61178738 Msa0175280:intron 45.0%
!! CATACTTTGGGTGTCGAGAA+TGG - chr1_4:61178776-61178795 Msa0175280:intron 45.0%
CAGTGCATGTTAGCCATGAA+TGG - chr1_4:61178986-61179005 Msa0175280:intron 45.0%
TCACTCGATTGCAACTTCGA+AGG - chr1_4:61179054-61179073 Msa0175280:intron 45.0%
CACTCGATTGCAACTTCGAA+GGG - chr1_4:61179055-61179074 Msa0175280:intron 45.0%
GATTGCAACTTCGAAGGGTT+GGG - chr1_4:61179060-61179079 Msa0175280:intron 45.0%
ATTGCAACTTCGAAGGGTTG+GGG - chr1_4:61179061-61179080 Msa0175280:intron 45.0%
! TTCTCCTGGGAACGTTTTGT+TGG - chr1_4:61179207-61179226 Msa0175280:intron 45.0%
TGAACCAACAAAACGTTCCC+AGG + chr1_4:61179214-61179233 None:intergenic 45.0%
! ATTCTCCCCGGTGCTAATTT+GGG + chr1_4:61179490-61179509 None:intergenic 45.0%
GAATCGAACTTGAGACCTTG+AGG - chr1_4:61179506-61179525 Msa0175280:CDS 45.0%
TAAATCACAACCAACGGCTC+TGG + chr1_4:61179750-61179769 None:intergenic 45.0%
! CAGTAGAAAGCGAGGAGTTT+TGG - chr1_4:61179780-61179799 Msa0175280:intron 45.0%
! TGAACACTCTCAAAGGGTGT+TGG - chr1_4:61179980-61179999 Msa0175280:intron 45.0%
ATAGGTGGAAGGAGAAAGGA+AGG + chr1_4:61180416-61180435 None:intergenic 45.0%
GAGAATAGGTGGAAGGAGAA+AGG + chr1_4:61180420-61180439 None:intergenic 45.0%
! TAGAAGTGGTGGAGAATAGG+TGG + chr1_4:61180431-61180450 None:intergenic 45.0%
GAAGGATTCTGTAACGGTTG+TGG - chr1_4:61180634-61180653 Msa0175280:intron 45.0%
GAAATTGTGTCTCCTCCAAG+AGG + chr1_4:61180665-61180684 None:intergenic 45.0%
CATGGATCGTCTGAGTTGTT+AGG - chr1_4:61180811-61180830 Msa0175280:intron 45.0%
! AACGATCAAGGAGAGTGCAT+TGG - chr1_4:61181069-61181088 Msa0175280:intron 45.0%
! ACGATCAAGGAGAGTGCATT+GGG - chr1_4:61181070-61181089 Msa0175280:intron 45.0%
! GTGTCTAGGATTGCAAGTGT+TGG + chr1_4:61181206-61181225 None:intergenic 45.0%
! CCTCGGATTAGACGATTCTT+GGG + chr1_4:61181283-61181302 None:intergenic 45.0%
CCAAGAATCGTCTAATCCGA+GGG - chr1_4:61181281-61181300 Msa0175280:intron 45.0%
CAAGAATCGTCTAATCCGAG+GGG - chr1_4:61181282-61181301 Msa0175280:intron 45.0%
CAAGCCAAAAGAACATTCGG+GGG - chr1_4:61181478-61181497 Msa0175280:intron 45.0%
AAGCCAAAAGAACATTCGGG+GGG - chr1_4:61181479-61181498 Msa0175280:intron 45.0%
! AATCCCCCCGAATGTTCTTT+TGG + chr1_4:61181485-61181504 None:intergenic 45.0%
TTTCTCCGTGGCACTACTAT+TGG - chr1_4:61182507-61182526 Msa0175280:intron 45.0%
GAAGAGAAATCACCATGGGA+TGG + chr1_4:61182570-61182589 None:intergenic 45.0%
GGAGTGAAGAGAAATCACCA+TGG + chr1_4:61182575-61182594 None:intergenic 45.0%
GGTGATTTCTCTTCACTCCA+TGG - chr1_4:61182576-61182595 Msa0175280:intron 45.0%
CACTCCATGGCTCATATTGA+TGG - chr1_4:61182589-61182608 Msa0175280:intron 45.0%
CTTTGTCTTGCAGGGTGTAT+TGG - chr1_4:61182762-61182781 Msa0175280:intron 45.0%
GAACTTATGCCCATTGTACC+AGG - chr1_4:61182862-61182881 Msa0175280:intron 45.0%
!! CATTCTAGGGTTCCATCCTA+AGG + chr1_4:61183437-61183456 None:intergenic 45.0%
GCAGAACTTGGTATCGTTAG+AGG - chr1_4:61183487-61183506 Msa0175280:intron 45.0%
GAACTTGGTATCGTTAGAGG+CGG - chr1_4:61183490-61183509 Msa0175280:intron 45.0%
! AAGAGGTGTGAACACTAAGC+CGG + chr1_4:61183701-61183720 None:intergenic 45.0%
!!! TTTATTTTTTGGGGGGGTGG+GGG - chr1_4:61183783-61183802 Msa0175280:intron 45.0%
ACATACATGTAGTGAGCCAG+CGG + chr1_4:61184315-61184334 None:intergenic 45.0%
CTATCACCAAATTCCTGGTC+TGG + chr1_4:61184690-61184709 None:intergenic 45.0%
AAGTCCAGCAACAGTATGAG+GGG - chr1_4:61184847-61184866 Msa0175280:intron 45.0%
! TCGCCTCAAGCATTTTCAGA+TGG + chr1_4:61184909-61184928 None:intergenic 45.0%
TAGAGAAGAGACGGGACTAT+AGG - chr1_4:61184972-61184991 Msa0175280:CDS 45.0%
!! CAATATTATATATTATAAAA+TGG - chr1_4:61179152-61179171 Msa0175280:intron 5.0%
!!! TTATATTTTTTCTTATAAAA+TGG + chr1_4:61181179-61181198 None:intergenic 5.0%
!!! TTTTTATTTTTTATTTTTTG+GGG - chr1_4:61183774-61183793 Msa0175280:intron 5.0%
!! ATTATTTATTTCATTAATTA+TGG - chr1_4:61183832-61183851 Msa0175280:intron 5.0%
GAGTGTGTCTACGTGAGTAG+CGG + chr1_4:61176189-61176208 None:intergenic 50.0%
AAGGTCTACTGGAGGGAATG+TGG - chr1_4:61176525-61176544 Msa0175280:CDS 50.0%
GGACTTTGTGGTAGACTCCA+AGG - chr1_4:61176582-61176601 Msa0175280:CDS 50.0%
CTCCAGACAAACCCTGAGAT+AGG - chr1_4:61176856-61176875 Msa0175280:intron 50.0%
GTCCTATCTCAGGGTTTGTC+TGG + chr1_4:61176861-61176880 None:intergenic 50.0%
TCAACGGTGTTCAGTCCTAC+TGG + chr1_4:61177079-61177098 None:intergenic 50.0%
GCTGGCATGCCTTATAACCT+TGG - chr1_4:61177131-61177150 Msa0175280:intron 50.0%
TTACAAGCCTTTATGGGGGG+GGG - chr1_4:61177214-61177233 Msa0175280:CDS 50.0%
GCTTATGGCGGTTTCTCGAT+TGG + chr1_4:61177400-61177419 None:intergenic 50.0%
ATGCTCCACACAATGTGCGT+TGG + chr1_4:61178221-61178240 None:intergenic 50.0%
CGATTGCAACTTCGAAGGGT+TGG - chr1_4:61179059-61179078 Msa0175280:intron 50.0%
!! CTTGAAAGCATCACTGCTGC+AGG + chr1_4:61179130-61179149 None:intergenic 50.0%
TAGCCCACCCAAATTAGCAC+CGG - chr1_4:61179480-61179499 Msa0175280:CDS 50.0%
! GATTCTCCCCGGTGCTAATT+TGG + chr1_4:61179491-61179510 None:intergenic 50.0%
GTCTCAAGTTCGATTCTCCC+CGG + chr1_4:61179502-61179521 None:intergenic 50.0%
TCGAACTTGAGACCTTGAGG+AGG - chr1_4:61179509-61179528 Msa0175280:CDS 50.0%
!!! CGAGGAGTTTTGGAGAGATG+TGG - chr1_4:61179790-61179809 Msa0175280:intron 50.0%
TGGACGTTTGCCAGTTCTTC+AGG - chr1_4:61179826-61179845 Msa0175280:intron 50.0%
!! CACTCTCAAAGGGTGTTGGA+TGG - chr1_4:61179984-61180003 Msa0175280:intron 50.0%
! AGTGGTGGAGAATAGGTGGA+AGG + chr1_4:61180427-61180446 None:intergenic 50.0%
ACGGTTGTGGGATATCCTCT+TGG - chr1_4:61180647-61180666 Msa0175280:intron 50.0%
GTTGTGGGATATCCTCTTGG+AGG - chr1_4:61180650-61180669 Msa0175280:intron 50.0%
GGGAGTTGTATCTCGTGTAG+AGG - chr1_4:61180694-61180713 Msa0175280:intron 50.0%
CTCCTTGATCGTTGAACGCT+GGG + chr1_4:61181062-61181081 None:intergenic 50.0%
TCTCCTTGATCGTTGAACGC+TGG + chr1_4:61181063-61181082 None:intergenic 50.0%
! CGATCAAGGAGAGTGCATTG+GGG - chr1_4:61181071-61181090 Msa0175280:intron 50.0%
GGATTAGACGATTCTTGGGC+CGG + chr1_4:61181279-61181298 None:intergenic 50.0%
CCCAAGAATCGTCTAATCCG+AGG - chr1_4:61181280-61181299 Msa0175280:intron 50.0%
! CCCTCGGATTAGACGATTCT+TGG + chr1_4:61181284-61181303 None:intergenic 50.0%
AGGCATGGCATCATACTGCT+TGG - chr1_4:61181794-61181813 Msa0175280:intron 50.0%
GGCATGGCATCATACTGCTT+GGG - chr1_4:61181795-61181814 Msa0175280:intron 50.0%
! AGGAGGCTTGGTACAACACA+TGG + chr1_4:61182164-61182183 None:intergenic 50.0%
CTCCTAGGTTTCCCTTGTCT+TGG - chr1_4:61182233-61182252 Msa0175280:intron 50.0%
CTCCAAGACAAGGGAAACCT+AGG + chr1_4:61182238-61182257 None:intergenic 50.0%
TTCAAACATGCTCGCAGTGC+AGG + chr1_4:61182284-61182303 None:intergenic 50.0%
GGTGATTGCAGATGCCAGAA+CGG - chr1_4:61182355-61182374 Msa0175280:intron 50.0%
GCAGGTGATACTGCAGAACT+TGG - chr1_4:61183475-61183494 Msa0175280:intron 50.0%
! CTTTTCGGATCGACAGGTCT+TGG - chr1_4:61184215-61184234 Msa0175280:intron 50.0%
! TTTGTGAGATTGACTCCCGC+TGG - chr1_4:61184296-61184315 Msa0175280:intron 50.0%
CATACATGTAGTGAGCCAGC+GGG + chr1_4:61184314-61184333 None:intergenic 50.0%
AGATGACGATGCAGCAGCAA+CGG + chr1_4:61184577-61184596 None:intergenic 50.0%
CAAATTCCTGGTCTGGTGGT+TGG + chr1_4:61184683-61184702 None:intergenic 50.0%
CAACCACCAGACCAGGAATT+TGG - chr1_4:61184681-61184700 Msa0175280:CDS 50.0%
TCACCAAATTCCTGGTCTGG+TGG + chr1_4:61184687-61184706 None:intergenic 50.0%
CTGGGCTATCACCAAATTCC+TGG + chr1_4:61184695-61184714 None:intergenic 50.0%
CACGCTAACATGACATCTCC+AGG + chr1_4:61184772-61184791 None:intergenic 50.0%
GGACTATAGGCAAGAGCTCA+TGG - chr1_4:61184985-61185004 Msa0175280:CDS 50.0%
GGTAGACTCCAAGGATCAGC+AGG - chr1_4:61176591-61176610 Msa0175280:CDS 55.0%
TACAAGCCTTTATGGGGGGG+GGG - chr1_4:61177215-61177234 Msa0175280:CDS 55.0%
AGCCCACCCAAATTAGCACC+GGG - chr1_4:61179481-61179500 Msa0175280:CDS 55.0%
! TCCCCGGTGCTAATTTGGGT+GGG + chr1_4:61179486-61179505 None:intergenic 55.0%
TTGGAGTGTGCTCCTCCTCA+AGG + chr1_4:61179524-61179543 None:intergenic 55.0%
! TTGAGGAGGAGCACACTCCA+AGG - chr1_4:61179523-61179542 Msa0175280:CDS 55.0%
!! CAGGTTTTAGCCAGAGCCGT+TGG - chr1_4:61179737-61179756 Msa0175280:intron 55.0%
! TCAAGGAGAGTGCATTGGGG+TGG - chr1_4:61181074-61181093 Msa0175280:intron 55.0%
GTGCATTGGGGTGGCATTTC+AGG - chr1_4:61181083-61181102 Msa0175280:intron 55.0%
CCAATCCCATCGTCCACTTG+CGG - chr1_4:61181306-61181325 Msa0175280:intron 55.0%
CAATCCCATCGTCCACTTGC+GGG - chr1_4:61181307-61181326 Msa0175280:intron 55.0%
AATCCCATCGTCCACTTGCG+GGG - chr1_4:61181308-61181327 Msa0175280:intron 55.0%
GTTGCCCCTCATACTGTTGC+TGG + chr1_4:61184854-61184873 None:intergenic 55.0%
ACAAGCCTTTATGGGGGGGG+GGG - chr1_4:61177216-61177235 Msa0175280:CDS 60.0%
GCCCACCCAAATTAGCACCG+GGG - chr1_4:61179482-61179501 Msa0175280:CDS 60.0%
! CTCCCCGGTGCTAATTTGGG+TGG + chr1_4:61179487-61179506 None:intergenic 60.0%
GGCCCAGCGTTCAACGATCA+AGG - chr1_4:61181057-61181076 Msa0175280:intron 60.0%
GACGATGGGATTGGACCCCT+CGG + chr1_4:61181300-61181319 None:intergenic 60.0%
CCGCAAGTGGACGATGGGAT+TGG + chr1_4:61181309-61181328 None:intergenic 60.0%
ATCCCATCGTCCACTTGCGG+GGG - chr1_4:61181309-61181328 Msa0175280:intron 60.0%
AGGTGACCAACCACCAGACC+AGG - chr1_4:61184674-61184693 Msa0175280:CDS 60.0%
!! TTGGCCACGACGGATTGCTC+TGG - chr1_4:61184730-61184749 Msa0175280:intron 60.0%
!! TGGCCACGACGGATTGCTCT+GGG - chr1_4:61184731-61184750 Msa0175280:intron 60.0%
ATGCCCAGAGCAATCCGTCG+TGG + chr1_4:61184737-61184756 None:intergenic 60.0%
CAAGCCTTTATGGGGGGGGG+GGG - chr1_4:61177217-61177236 Msa0175280:CDS 65.0%
AAGCCTTTATGGGGGGGGGG+GGG - chr1_4:61177218-61177237 Msa0175280:CDS 65.0%
TCCCATCGTCCACTTGCGGG+GGG - chr1_4:61181310-61181329 Msa0175280:intron 65.0%
TCCCCCCGCAAGTGGACGAT+GGG + chr1_4:61181314-61181333 None:intergenic 65.0%
ATCGTCCACTTGCGGGGGGA+CGG - chr1_4:61181314-61181333 Msa0175280:intron 65.0%
AGCCTTTATGGGGGGGGGGG+GGG - chr1_4:61177219-61177238 Msa0175280:CDS 70.0%
GTCCCCCCGCAAGTGGACGA+TGG + chr1_4:61181315-61181334 None:intergenic 70.0%
TCGTCCACTTGCGGGGGGAC+GGG - chr1_4:61181315-61181334 Msa0175280:intron 70.0%
GCCTTTATGGGGGGGGGGGG+GGG - chr1_4:61177220-61177239 Msa0175280:intron 75.0%
CCTTTATGGGGGGGGGGGGG+GGG - chr1_4:61177221-61177240 Msa0175280:intron 75.0%
CTTTATGGGGGGGGGGGGGG+GGG - chr1_4:61177222-61177241 Msa0175280:intron 75.0%
TTTATGGGGGGGGGGGGGGG+GGG - chr1_4:61177223-61177242 Msa0175280:intron 75.0%
CGTCCACTTGCGGGGGGACG+GGG - chr1_4:61181316-61181335 Msa0175280:intron 75.0%
! CCCCCCCCCCCCCCCCATAA+AGG + chr1_4:61177224-61177243 None:intergenic 80.0%
! TTATGGGGGGGGGGGGGGGG+GGG - chr1_4:61177224-61177243 Msa0175280:intron 80.0%
! GGTCCCCGTCCCCCCGCAAG+TGG + chr1_4:61181322-61181341 None:intergenic 80.0%
! TATGGGGGGGGGGGGGGGGG+GGG - chr1_4:61177225-61177244 Msa0175280:intron 85.0%
! ATGGGGGGGGGGGGGGGGGG+GGG - chr1_4:61177226-61177245 Msa0175280:intron 90.0%
! TGGGGGGGGGGGGGGGGGGG+GGG - chr1_4:61177227-61177246 Msa0175280:intron 95.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 61175988 61185241 61175988 ID=Msa0175280;Name=Msa0175280
chr1_4 mRNA 61175988 61185241 61175988 ID=Msa0175280-mRNA-1;Parent=Msa0175280;Name=Msa0175280-mRNA-1;_AED=0.23;_eAED=0.23;_QI=133|0.88|0.94|1|1|1|18|483|537
chr1_4 exon 61175988 61176721 61175988 ID=Msa0175280-mRNA-1:exon:19520;Parent=Msa0175280-mRNA-1
chr1_4 exon 61176944 61176998 61176944 ID=Msa0175280-mRNA-1:exon:19519;Parent=Msa0175280-mRNA-1
chr1_4 exon 61177167 61177238 61177167 ID=Msa0175280-mRNA-1:exon:19518;Parent=Msa0175280-mRNA-1
chr1_4 exon 61177338 61177362 61177338 ID=Msa0175280-mRNA-1:exon:19517;Parent=Msa0175280-mRNA-1
chr1_4 exon 61177492 61177577 61177492 ID=Msa0175280-mRNA-1:exon:19516;Parent=Msa0175280-mRNA-1
chr1_4 exon 61177671 61177758 61177671 ID=Msa0175280-mRNA-1:exon:19515;Parent=Msa0175280-mRNA-1
chr1_4 exon 61178208 61178311 61178208 ID=Msa0175280-mRNA-1:exon:19514;Parent=Msa0175280-mRNA-1
chr1_4 exon 61178398 61178454 61178398 ID=Msa0175280-mRNA-1:exon:19513;Parent=Msa0175280-mRNA-1
chr1_4 exon 61178910 61178989 61178910 ID=Msa0175280-mRNA-1:exon:19512;Parent=Msa0175280-mRNA-1
chr1_4 exon 61179454 61179553 61179454 ID=Msa0175280-mRNA-1:exon:19511;Parent=Msa0175280-mRNA-1
chr1_4 exon 61180125 61180183 61180125 ID=Msa0175280-mRNA-1:exon:19510;Parent=Msa0175280-mRNA-1
chr1_4 exon 61180367 61180433 61180367 ID=Msa0175280-mRNA-1:exon:19509;Parent=Msa0175280-mRNA-1
chr1_4 exon 61180514 61180591 61180514 ID=Msa0175280-mRNA-1:exon:19508;Parent=Msa0175280-mRNA-1
chr1_4 exon 61181382 61181489 61181382 ID=Msa0175280-mRNA-1:exon:19507;Parent=Msa0175280-mRNA-1
chr1_4 exon 61182509 61182553 61182509 ID=Msa0175280-mRNA-1:exon:19506;Parent=Msa0175280-mRNA-1
chr1_4 exon 61183694 61183744 61183694 ID=Msa0175280-mRNA-1:exon:19505;Parent=Msa0175280-mRNA-1
chr1_4 exon 61184617 61184733 61184617 ID=Msa0175280-mRNA-1:exon:19504;Parent=Msa0175280-mRNA-1
chr1_4 exon 61184938 61185241 61184938 ID=Msa0175280-mRNA-1:exon:19503;Parent=Msa0175280-mRNA-1
chr1_4 five_prime_UTR 61185109 61185241 61185109 ID=Msa0175280-mRNA-1:five_prime_utr;Parent=Msa0175280-mRNA-1
chr1_4 CDS 61184938 61185108 61184938 ID=Msa0175280-mRNA-1:cds;Parent=Msa0175280-mRNA-1
chr1_4 CDS 61184617 61184733 61184617 ID=Msa0175280-mRNA-1:cds;Parent=Msa0175280-mRNA-1
chr1_4 CDS 61183694 61183744 61183694 ID=Msa0175280-mRNA-1:cds;Parent=Msa0175280-mRNA-1
chr1_4 CDS 61182509 61182553 61182509 ID=Msa0175280-mRNA-1:cds;Parent=Msa0175280-mRNA-1
chr1_4 CDS 61181382 61181489 61181382 ID=Msa0175280-mRNA-1:cds;Parent=Msa0175280-mRNA-1
chr1_4 CDS 61180514 61180591 61180514 ID=Msa0175280-mRNA-1:cds;Parent=Msa0175280-mRNA-1
chr1_4 CDS 61180367 61180433 61180367 ID=Msa0175280-mRNA-1:cds;Parent=Msa0175280-mRNA-1
chr1_4 CDS 61180125 61180183 61180125 ID=Msa0175280-mRNA-1:cds;Parent=Msa0175280-mRNA-1
chr1_4 CDS 61179454 61179553 61179454 ID=Msa0175280-mRNA-1:cds;Parent=Msa0175280-mRNA-1
chr1_4 CDS 61178910 61178989 61178910 ID=Msa0175280-mRNA-1:cds;Parent=Msa0175280-mRNA-1
chr1_4 CDS 61178398 61178454 61178398 ID=Msa0175280-mRNA-1:cds;Parent=Msa0175280-mRNA-1
chr1_4 CDS 61178208 61178311 61178208 ID=Msa0175280-mRNA-1:cds;Parent=Msa0175280-mRNA-1
chr1_4 CDS 61177671 61177758 61177671 ID=Msa0175280-mRNA-1:cds;Parent=Msa0175280-mRNA-1
chr1_4 CDS 61177492 61177577 61177492 ID=Msa0175280-mRNA-1:cds;Parent=Msa0175280-mRNA-1
chr1_4 CDS 61177338 61177362 61177338 ID=Msa0175280-mRNA-1:cds;Parent=Msa0175280-mRNA-1
chr1_4 CDS 61177167 61177238 61177167 ID=Msa0175280-mRNA-1:cds;Parent=Msa0175280-mRNA-1
chr1_4 CDS 61176944 61176998 61176944 ID=Msa0175280-mRNA-1:cds;Parent=Msa0175280-mRNA-1
chr1_4 CDS 61176471 61176721 61176471 ID=Msa0175280-mRNA-1:cds;Parent=Msa0175280-mRNA-1
chr1_4 three_prime_UTR 61175988 61176470 61175988 ID=Msa0175280-mRNA-1:three_prime_utr;Parent=Msa0175280-mRNA-1
Gene Sequence

>Msa0175280

ATGGCTGTTGCACTTTCTAGTTACTGTTCCATGTTCTCTGTGTTATCTTCTTCCACTGTCAAATTCCGCTACTCACGTAGACACACTCACACACCTACACAGAGACCCTTCATTTCTATTCATTGCAGCCGCACTCCTTCTTCTAATTCTGACCCCAATTTCAAAGGACAGAATTCGTTGGAGCTCTCATCAAAAGAGGAAAGGTCTACTGGAGGGAATGTGGTGCCAGCTTCTTTTAAGTCTTCAAGGAAAAATAAGGACTTTGTGGTAGACTCCAAGGATCAGCAGGGTGAATCAAGTGTTTTACAAGATTCGGCTTTCCTCAATGCTGTTGTGAAGGTTAAAGTCAAGAGAAGAGGGGATGACTCGAAATATGTGGCTAAGGTTTTAGCCAGAGCCGTTGGTTGTGATTTAGCTTTGCTTTCAGTAGAAAGCGAGGAGTTTTGGAGAGATGTGGAACCTCTTAAATTTGGACGTTTGCCAGTTCTTCAGGATTCTGTAACGGTTGTGGGATATCCTCTTGGAGGAGACACAATTTCAGTGACAAAGGGAGTTGTATCTCGTGTAGAGGTTACATCATATGCTCATGGATCGTCTGAGTTGTTAGGAATTCAAATTGATGCAGCAATAAATCCTGGCAATAGCGGAGGCCCAGCGTTCAACGATCAAGGAGAGTGCATTGGGGTGGCATTTCAGGTCTACAGATCTGAAGATGCTGAGAATATTGGATATGTGATTCCATCAACAGTTGTATCTCATTTTCTGACTGACTACGAAAAGAATGGCAAGTATACTGGTTTCCCTTGTCTTGGAGTACTTATACAAAAGTTAGAGAATCCTGCACTGCGAGCATGTTTGAAACTACAGTCTAATGAGGGTGTATTGGTACGTAGAGTTGAACCAACTTCTGATGCAAATAATGTATTAAAGGAGGGTGATGTGATTGTCAGCTTTGATGATATACGTGTTGGATGTGAAGGAACAGTTCCATTCCGCTCAAATGAGAGAATTGCCTTTCACTACCTCATTAGTCAAAAATTTGCAGGTGATACTGCAGAACTTGGTATCGTTAGAGGCGGAACATCAATGAAAGCTAAAGTTATTTTAAACCCACGAGTTCATTTGGTTCCCTTTCATATTGATGAAGGTCAGCCTTCCTACTTAATTATTGCCGGCTTAGTGTTCACACCTCTTTCAGAACCATTGATTGAGGAGGAACGTGAAGATTGTATAGGGCTAAAGTTATTGGCAAAGGCACGTTATTCATTTGCAAGGTTTAAAGGGGAACAAATTGTAATTCTCTCACAGGTCTTGGCAAATGAGCTCAACATAGGTTATGAAGATATGAGCAATCAGCAGGCAACATGCAAGGACAAATATCTGTGTTTTGAATTTGAAGATTGCTATGCTGCTGTTTTGGAGAGAGAAGCCGTTGCTGCTGCATCGTCATCTTTGCTGAGAGACTATGGTATTCCATCTGAAAGATCTTCTGATCTTTTGCAACCCTATGTGGATTCACAAGAAGTAGAAGGTGACCAACCACCAGACCAGGAATTTGGTGATAGCCCAGTTTCAAATTTTGAAGTTGGCCACGACGGATTGCTCTGGGCATAA

Protein sequence

>Msa0175280

MAVALSSYCSMFSVLSSSTVKFRYSRRHTHTPTQRPFISIHCSRTPSSNSDPNFKGQNSLELSSKEERSTGGNVVPASFKSSRKNKDFVVDSKDQQGESSVLQDSAFLNAVVKVKVKRRGDDSKYVAKVLARAVGCDLALLSVESEEFWRDVEPLKFGRLPVLQDSVTVVGYPLGGDTISVTKGVVSRVEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVYRSEDAENIGYVIPSTVVSHFLTDYEKNGKYTGFPCLGVLIQKLENPALRACLKLQSNEGVLVRRVEPTSDANNVLKEGDVIVSFDDIRVGCEGTVPFRSNERIAFHYLISQKFAGDTAELGIVRGGTSMKAKVILNPRVHLVPFHIDEGQPSYLIIAGLVFTPLSEPLIEEEREDCIGLKLLAKARYSFARFKGEQIVILSQVLANELNIGYEDMSNQQATCKDKYLCFEFEDCYAAVLEREAVAAASSSLLRDYGIPSERSSDLLQPYVDSQEVEGDQPPDQEFGDSPVSNFEVGHDGLLWA*