Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0686180 | XP_024637186.1 | 84.132 | 334 | 41 | 5 | 10 | 334 | 1 | 331 | 0.0 | 549 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0686180 | sp|Q8RY18|TRF1A_ARATH | 38.636 | 132 | 79 | 1 | 133 | 262 | 175 | 306 | 6.12e-21 | 97.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0686180 | A0A396I6R9 | 84.132 | 334 | 41 | 5 | 10 | 334 | 1 | 331 | 0.0 | 549 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa0686180 | 0.824226 | 9.051138e-54 | -8.615850e-47 |
| Msa0026910 | Msa0686180 | 0.809796 | 1.585399e-50 | -8.615850e-47 |
| Msa0027320 | Msa0686180 | 0.809006 | 2.341994e-50 | -8.615850e-47 |
| Msa0053760 | Msa0686180 | 0.811405 | 7.116909e-51 | -8.615850e-47 |
| Msa0056450 | Msa0686180 | 0.822885 | 1.864304e-53 | -8.615850e-47 |
| Msa0058600 | Msa0686180 | 0.841415 | 4.817075e-58 | -8.615850e-47 |
| Msa0099620 | Msa0686180 | 0.804748 | 1.861596e-49 | -8.615850e-47 |
| Msa0105070 | Msa0686180 | 0.809170 | 2.159678e-50 | -8.615850e-47 |
| Msa0615220 | Msa0686180 | 0.809501 | 1.834433e-50 | -8.615850e-47 |
| Msa0661320 | Msa0686180 | 0.821313 | 4.314178e-53 | -8.615850e-47 |
| Msa0677080 | Msa0686180 | 0.802308 | 5.966643e-49 | -8.615850e-47 |
| Msa0685760 | Msa0686180 | 0.841307 | 5.143883e-58 | -8.615850e-47 |
| Msa0686180 | Msa0693380 | 0.806733 | 7.127189e-50 | -8.615850e-47 |
| Msa0686180 | Msa0715470 | 0.800864 | 1.180050e-48 | -8.615850e-47 |
| Msa0686180 | Msa0797770 | 0.804070 | 2.576902e-49 | -8.615850e-47 |
| Msa0686180 | Msa0832090 | 0.809454 | 1.877201e-50 | -8.615850e-47 |
| Msa0686180 | Msa0835230 | 0.802968 | 4.361024e-49 | -8.615850e-47 |
| Msa0686180 | Msa0847880 | 0.805186 | 1.507149e-49 | -8.615850e-47 |
| Msa0686180 | Msa0868160 | 0.826364 | 2.825607e-54 | -8.615850e-47 |
| Msa0686180 | Msa0873860 | 0.811981 | 5.334493e-51 | -8.615850e-47 |
| Msa0686180 | Msa0892570 | 0.814789 | 1.287926e-51 | -8.615850e-47 |
| Msa0686180 | Msa0896750 | 0.809783 | 1.594983e-50 | -8.615850e-47 |
| Msa0686180 | Msa0900620 | 0.821288 | 4.372284e-53 | -8.615850e-47 |
| Msa0686180 | Msa0936390 | 0.808522 | 2.971479e-50 | -8.615850e-47 |
| Msa0686180 | Msa1036410 | 0.816189 | 6.288077e-52 | -8.615850e-47 |
| Msa0686180 | Msa1080960 | 0.800726 | 1.258832e-48 | -8.615850e-47 |
| Msa0686180 | Msa1082500 | 0.809071 | 2.267869e-50 | -8.615850e-47 |
| Msa0686180 | Msa1176270 | 0.808704 | 2.717538e-50 | -8.615850e-47 |
| Msa0686180 | Msa1297290 | 0.816644 | 4.971371e-52 | -8.615850e-47 |
| Msa0686180 | Msa1299070 | 0.807944 | 3.945671e-50 | -8.615850e-47 |
| Msa0686180 | Msa1306850 | 0.802205 | 6.266764e-49 | -8.615850e-47 |
| Msa0686180 | Msa1313150 | 0.836918 | 7.059290e-57 | -8.615850e-47 |
| Msa0686180 | Msa1314340 | 0.803749 | 3.004446e-49 | -8.615850e-47 |
| Msa0686180 | Msa1333730 | 0.805316 | 1.416057e-49 | -8.615850e-47 |
| Msa0686180 | Msa1362400 | 0.802148 | 6.435356e-49 | -8.615850e-47 |
| Msa0686180 | Msa1385000 | 0.815486 | 9.020989e-52 | -8.615850e-47 |
| Msa0686180 | Msa1403480 | 0.800371 | 1.487185e-48 | -8.615850e-47 |
| Msa0686180 | Msa1408620 | -0.813409 | 2.597500e-51 | -8.615850e-47 |
| Msa0686180 | Msa1410210 | 0.800534 | 1.377677e-48 | -8.615850e-47 |
| Msa0686180 | Msa1423880 | 0.832271 | 1.039989e-55 | -8.615850e-47 |
| Msa0686180 | Msa1440940 | 0.803557 | 3.292753e-49 | -8.615850e-47 |
| Msa0686180 | Msa1443060 | 0.802579 | 5.247263e-49 | -8.615850e-47 |
| Msa0167850 | Msa0686180 | 0.822131 | 2.791621e-53 | -8.615850e-47 |
| Msa0187830 | Msa0686180 | 0.809162 | 2.168390e-50 | -8.615850e-47 |
| Msa0200560 | Msa0686180 | 0.817196 | 3.737926e-52 | -8.615850e-47 |
| Msa0388960 | Msa0686180 | 0.845922 | 3.001860e-59 | -8.615850e-47 |
| Msa0389910 | Msa0686180 | 0.809222 | 2.104657e-50 | -8.615850e-47 |
| Msa0466390 | Msa0686180 | 0.803498 | 3.387138e-49 | -8.615850e-47 |
| Msa0468800 | Msa0686180 | 0.822318 | 2.525333e-53 | -8.615850e-47 |
| Msa0245940 | Msa0686180 | 0.807576 | 4.724121e-50 | -8.615850e-47 |
| Msa0249100 | Msa0686180 | 0.802430 | 5.631199e-49 | -8.615850e-47 |
| Msa0262510 | Msa0686180 | 0.805143 | 1.539306e-49 | -8.615850e-47 |
| Msa0281640 | Msa0686180 | 0.805093 | 1.576717e-49 | -8.615850e-47 |
| Msa0281930 | Msa0686180 | 0.809082 | 2.255209e-50 | -8.615850e-47 |
| Msa0284520 | Msa0686180 | 0.812516 | 4.076374e-51 | -8.615850e-47 |
| Msa0320800 | Msa0686180 | 0.815692 | 8.114426e-52 | -8.615850e-47 |
| Msa0484780 | Msa0686180 | 0.826557 | 2.541357e-54 | -8.615850e-47 |
| Msa0520700 | Msa0686180 | 0.803823 | 2.899836e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0686180 | MtrunA17_Chr4g0035371 | 84.132 | 334 | 41 | 5 | 10 | 334 | 1 | 331 | 0.0 | 549 |
| Msa0686180 | MtrunA17_Chr8g0380881 | 60.092 | 218 | 76 | 2 | 127 | 335 | 6 | 221 | 6.51e-77 | 243 |
| Msa0686180 | MtrunA17_Chr8g0380881 | 45.652 | 138 | 57 | 5 | 22 | 147 | 330 | 461 | 5.40e-23 | 99.4 |
| Msa0686180 | MtrunA17_Chr8g0380871 | 60.938 | 128 | 39 | 2 | 220 | 338 | 1 | 126 | 1.08e-41 | 142 |
| Msa0686180 | MtrunA17_Chr1g0186411 | 26.703 | 367 | 210 | 11 | 27 | 338 | 46 | 408 | 1.10e-22 | 99.4 |
| Msa0686180 | MtrunA17_Chr1g0168221 | 29.508 | 244 | 131 | 5 | 134 | 338 | 171 | 412 | 1.61e-20 | 93.2 |
| Msa0686180 | MtrunA17_Chr1g0186421 | 26.923 | 286 | 179 | 9 | 26 | 290 | 32 | 308 | 1.06e-19 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0686180 | AT5G43560.2 | 38.636 | 132 | 79 | 1 | 133 | 262 | 175 | 306 | 6.23e-22 | 97.4 |
| Msa0686180 | AT5G43560.1 | 38.636 | 132 | 79 | 1 | 133 | 262 | 175 | 306 | 6.23e-22 | 97.4 |
| Msa0686180 | AT5G52330.4 | 25.405 | 370 | 215 | 11 | 27 | 339 | 5 | 370 | 1.38e-21 | 95.1 |
| Msa0686180 | AT5G52330.3 | 25.405 | 370 | 215 | 11 | 27 | 339 | 5 | 370 | 1.38e-21 | 95.1 |
| Msa0686180 | AT5G52330.1 | 25.405 | 370 | 215 | 11 | 27 | 339 | 5 | 370 | 1.38e-21 | 95.1 |
| Msa0686180 | AT5G52330.2 | 27.419 | 248 | 135 | 6 | 134 | 339 | 75 | 319 | 1.38e-17 | 83.2 |
| Msa0686180 | AT1G04300.3 | 33.088 | 136 | 89 | 1 | 133 | 266 | 182 | 317 | 1.99e-17 | 84.0 |
| Msa0686180 | AT1G04300.1 | 33.088 | 136 | 89 | 1 | 133 | 266 | 174 | 309 | 2.16e-17 | 84.0 |
| Msa0686180 | AT1G04300.4 | 33.088 | 136 | 89 | 1 | 133 | 266 | 155 | 290 | 2.17e-17 | 84.0 |
| Msa0686180 | AT1G04300.5 | 33.088 | 136 | 89 | 1 | 133 | 266 | 144 | 279 | 2.22e-17 | 84.0 |
| Msa0686180 | AT1G04300.2 | 33.846 | 130 | 84 | 1 | 133 | 260 | 97 | 226 | 1.24e-16 | 81.6 |
Find 57 sgRNAs with CRISPR-Local
Find 527 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTGCCATCCCTACTTAAA+AGG | 0.210639 | 4_4:+50505852 | Msa0686180:CDS |
| AAAACTAAAGTCATTGAAAT+TGG | 0.210770 | 4_4:+50503750 | Msa0686180:CDS |
| ATTGAAATTGGAGGATTTAA+AGG | 0.238197 | 4_4:+50503762 | Msa0686180:CDS |
| GTTCAATGAACAGAATGATT+TGG | 0.268943 | 4_4:+50505651 | Msa0686180:CDS |
| GGAAAAGGAAGATGTAATTA+AGG | 0.284760 | 4_4:+50505673 | Msa0686180:CDS |
| ACTTAATTTCATTGTGAATC+AGG | 0.285562 | 4_4:-50504466 | None:intergenic |
| GGGACAATGCTTTCATATAT+AGG | 0.287041 | 4_4:-50505896 | None:intergenic |
| CTCTCTCAGGTAGGGATATT+CGG | 0.292534 | 4_4:+50503616 | Msa0686180:intron |
| TTGTTCTTGACTATCTATTC+AGG | 0.306654 | 4_4:+50505948 | Msa0686180:CDS |
| GTATCGAGCTGAGCTTCTTT+TGG | 0.317600 | 4_4:+50504376 | Msa0686180:CDS |
| TTCAATGAACAGAATGATTT+GGG | 0.320198 | 4_4:+50505652 | Msa0686180:CDS |
| GAATTGCAGATTCAGATTCT+TGG | 0.343032 | 4_4:+50504200 | Msa0686180:CDS |
| GAAAGCATTGTCCCACAGTT+TGG | 0.376185 | 4_4:+50505905 | Msa0686180:CDS |
| TCATCTGGATAATTCGGCTT+TGG | 0.377585 | 4_4:-50503717 | None:intergenic |
| TCATCGTCATCTGGATAATT+CGG | 0.378816 | 4_4:-50503723 | None:intergenic |
| AATTGCAGATTCAGATTCTT+GGG | 0.385387 | 4_4:+50504201 | Msa0686180:CDS |
| AATTTCACAGCTGTTCATAC+TGG | 0.387505 | 4_4:+50503860 | Msa0686180:CDS |
| CGATGGTTATGAATCAATAA+AGG | 0.388786 | 4_4:+50505763 | Msa0686180:CDS |
| TTGAAATTGGAGGATTTAAA+GGG | 0.394663 | 4_4:+50503763 | Msa0686180:CDS |
| TATGAATTTGATTGTGAAGA+AGG | 0.409577 | 4_4:+50504146 | Msa0686180:CDS |
| TACCTAAACGTTTAGTTAGT+AGG | 0.411795 | 4_4:-50503973 | None:intergenic |
| GAACAGAATGATTTGGGAAA+AGG | 0.412113 | 4_4:+50505658 | Msa0686180:CDS |
| AACTAGTATTTGGGTTTAGG+TGG | 0.454290 | 4_4:-50503288 | None:intergenic |
| TGTACTTTCATGATAGAAAG+TGG | 0.473343 | 4_4:+50505623 | Msa0686180:CDS |
| GGATAAGTTTGTCATATTTG+AGG | 0.483069 | 4_4:+50505799 | Msa0686180:CDS |
| TCACTTTGTGATGGTTATAC+CGG | 0.485058 | 4_4:+50504122 | Msa0686180:CDS |
| GTGACTCAATCGAACTGAAA+AGG | 0.486271 | 4_4:+50510329 | Msa0686180:CDS |
| CAGCTCGATACTTCTTTACA+AGG | 0.495077 | 4_4:-50504364 | None:intergenic |
| TACCTACTAACTAAACGTTT+AGG | 0.495499 | 4_4:+50503971 | Msa0686180:CDS |
| GTTTAGTTAGTAGGTAGTCA+TGG | 0.496896 | 4_4:-50503964 | None:intergenic |
| ACTTCTTTACAAGGAGAGGC+TGG | 0.502762 | 4_4:-50504355 | None:intergenic |
| ACTAAAGTCATTGAAATTGG+AGG | 0.506952 | 4_4:+50503753 | Msa0686180:CDS |
| TTTAGTTAGTAGGTAGTCAT+GGG | 0.517016 | 4_4:-50503963 | None:intergenic |
| TGTGACATCTCCTTTGCTAA+TGG | 0.517589 | 4_4:+50505730 | Msa0686180:CDS |
| TGTGCCATCCCTACTTAAAA+GGG | 0.523105 | 4_4:+50505853 | Msa0686180:CDS |
| TTCACAATCAAATTCATAGC+CGG | 0.524784 | 4_4:-50504141 | None:intergenic |
| CTATTCCACTCACTTTGTGA+TGG | 0.531983 | 4_4:+50504113 | Msa0686180:CDS |
| AGATGTAATTAAGGAAGCCT+TGG | 0.532966 | 4_4:+50505682 | Msa0686180:CDS |
| TTGTCATATTTGAGGACGAA+TGG | 0.538916 | 4_4:+50505807 | Msa0686180:CDS |
| TGATTCACAATGAAATTAAG+TGG | 0.540946 | 4_4:+50504468 | Msa0686180:CDS |
| CGATACTTCTTTACAAGGAG+AGG | 0.559558 | 4_4:-50504359 | None:intergenic |
| TGAAAGAAAGATGAAGGTGA+AGG | 0.563284 | 4_4:+50503510 | Msa0686180:CDS |
| ACAATGAAATTAAGTGGCCA+AGG | 0.567859 | 4_4:+50504474 | Msa0686180:CDS |
| AATAAAGGCTAACAATACTA+CGG | 0.575555 | 4_4:+50505778 | Msa0686180:CDS |
| TATAATATCTCCATTAGCAA+AGG | 0.582185 | 4_4:-50505740 | None:intergenic |
| TGAGGACGAATGGTTTGAGT+TGG | 0.583268 | 4_4:+50505817 | Msa0686180:CDS |
| CGGCGACAACGCAGAAACGC+AGG | 0.587614 | 4_4:+50503352 | Msa0686180:five_prime_UTR |
| GTGCTCAGTGCATAAAACAT+TGG | 0.590886 | 4_4:-50503923 | None:intergenic |
| ACAGTTTGGTTGTATGATTG+TGG | 0.591322 | 4_4:+50505919 | Msa0686180:CDS |
| TCTCTCTCTACTCTTACGAT+CGG | 0.592394 | 4_4:-50503323 | None:intergenic |
| CAATCATACAACCAAACTGT+GGG | 0.627226 | 4_4:-50505916 | None:intergenic |
| TATAACCATCACAAAGTGAG+TGG | 0.636863 | 4_4:-50504118 | None:intergenic |
| TTAGTTAGTAGGTAGTCATG+GGG | 0.642431 | 4_4:-50503962 | None:intergenic |
| CTAATGGAGATATTATACGA+TGG | 0.661760 | 4_4:+50505746 | Msa0686180:CDS |
| ACAATCATACAACCAAACTG+TGG | 0.705380 | 4_4:-50505917 | None:intergenic |
| TAGTTAGTAGGTAGTCATGG+GGG | 0.756976 | 4_4:-50503961 | None:intergenic |
| AGATAAATCAAATTTCAACG+AGG | 0.780113 | 4_4:-50503885 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGCTTATAATTAATTATA+TGG | - | chr4_4:50504277-50504296 | None:intergenic | 10.0% |
| !! | ATATAATTAATTATAAGCAT+TGG | + | chr4_4:50504276-50504295 | Msa0686180:intron | 10.0% |
| !! | TATAATTAATTATAAGCATT+GGG | + | chr4_4:50504277-50504296 | Msa0686180:intron | 10.0% |
| !! | CAACAAAAAAAAAAAAAATA+CGG | + | chr4_4:50505533-50505552 | Msa0686180:intron | 10.0% |
| !! | AACAAAAAAAAAAAAAATAC+GGG | + | chr4_4:50505534-50505553 | Msa0686180:intron | 10.0% |
| !! | ATTAATCTTCTTTATTAATT+AGG | + | chr4_4:50506106-50506125 | Msa0686180:intron | 10.0% |
| !! | TTAATCTTCTTTATTAATTA+GGG | + | chr4_4:50506107-50506126 | Msa0686180:intron | 10.0% |
| !!! | TTTATTTTTTTGAAGAAAAA+TGG | + | chr4_4:50510004-50510023 | Msa0686180:intron | 10.0% |
| !! | AAAAAAGTAAAAAAATACCT+TGG | - | chr4_4:50504494-50504513 | None:intergenic | 15.0% |
| !! | ATTTAATTAATAGATGTGTA+TGG | + | chr4_4:50504597-50504616 | Msa0686180:intron | 15.0% |
| !!! | TGAATTTTAATAATATATGG+TGG | + | chr4_4:50504630-50504649 | Msa0686180:intron | 15.0% |
| !! | CAAAAAGATATAACAAATTA+TGG | + | chr4_4:50504942-50504961 | Msa0686180:intron | 15.0% |
| !!! | ATTAATTATTCCTATTTCTA+AGG | - | chr4_4:50505327-50505346 | None:intergenic | 15.0% |
| !! | AAATAGGAATAATTAATTAC+AGG | + | chr4_4:50505330-50505349 | Msa0686180:intron | 15.0% |
| !! | AATGTGATATTCTTAATTTA+TGG | + | chr4_4:50505477-50505496 | Msa0686180:intron | 15.0% |
| !! | ATGTGATATTCTTAATTTAT+GGG | + | chr4_4:50505478-50505497 | Msa0686180:intron | 15.0% |
| !! | GTCAATAAATAAATCATATA+TGG | - | chr4_4:50505976-50505995 | None:intergenic | 15.0% |
| !! | TAATCTTCTTTATTAATTAG+GGG | + | chr4_4:50506108-50506127 | Msa0686180:intron | 15.0% |
| !!! | TTTTTCATATCATATTATGT+GGG | - | chr4_4:50506173-50506192 | None:intergenic | 15.0% |
| !! | AAAAAATTATAAATAGGATG+AGG | - | chr4_4:50508062-50508081 | None:intergenic | 15.0% |
| !! | TAGCTCAAAAAATTATAAAT+AGG | - | chr4_4:50508068-50508087 | None:intergenic | 15.0% |
| !! | ATTAATCTTCTTTATCAATT+AGG | + | chr4_4:50509785-50509804 | Msa0686180:intron | 15.0% |
| !! | TTAATCTTCTTTATCAATTA+GGG | + | chr4_4:50509786-50509805 | Msa0686180:intron | 15.0% |
| !!! | TTTTTCATATCATATTATGT+GGG | - | chr4_4:50506173-50506192 | None:intergenic | 15.0% |
| !! | TATCAAATAGTTAACAAAAT+AGG | - | chr4_4:50510147-50510166 | None:intergenic | 15.0% |
| !! | TGCTAAAAAAACTAGTATTT+GGG | - | chr4_4:50503300-50503319 | None:intergenic | 20.0% |
| !! | TTGCTAAAAAAACTAGTATT+TGG | - | chr4_4:50503301-50503320 | None:intergenic | 20.0% |
| !! | AAAACTAAAGTCATTGAAAT+TGG | + | chr4_4:50503750-50503769 | Msa0686180:CDS | 20.0% |
| !! | AAAGATATAACAAATTATGG+TGG | + | chr4_4:50504945-50504964 | Msa0686180:intron | 20.0% |
| !!! | ATATTTTTTATGTGAACTGT+GGG | + | chr4_4:50504977-50504996 | Msa0686180:intron | 20.0% |
| !! | TAACATTGCAGTATTTATAA+GGG | - | chr4_4:50505010-50505029 | None:intergenic | 20.0% |
| !! | TTAACATTGCAGTATTTATA+AGG | - | chr4_4:50505011-50505030 | None:intergenic | 20.0% |
| !!! | TATTGATTTGAGTAACTAAA+TGG | - | chr4_4:50505226-50505245 | None:intergenic | 20.0% |
| !! | TTTGTTGAATAACAAAACAT+GGG | - | chr4_4:50505520-50505539 | None:intergenic | 20.0% |
| !!! | TTTTGTTGAATAACAAAACA+TGG | - | chr4_4:50505521-50505540 | None:intergenic | 20.0% |
| !! | TAATATAAAGAAACAAGACT+CGG | - | chr4_4:50505999-50506018 | None:intergenic | 20.0% |
| !!! | TTTTCATATCATATTATGTG+GGG | - | chr4_4:50506172-50506191 | None:intergenic | 20.0% |
| !!! | GTTTTTCATATCATATTATG+TGG | - | chr4_4:50506174-50506193 | None:intergenic | 20.0% |
| !!! | TTTTGTTTCTTGTTGTTTAA+TGG | + | chr4_4:50506346-50506365 | Msa0686180:intron | 20.0% |
| !!! | TTTGTTTCTTGTTGTTTAAT+GGG | + | chr4_4:50506347-50506366 | Msa0686180:intron | 20.0% |
| !!! | GTAAAACAATTCGAATTTTA+CGG | + | chr4_4:50507167-50507186 | Msa0686180:intron | 20.0% |
| !! | AAATAAATATATCTACCTTG+TGG | + | chr4_4:50508727-50508746 | Msa0686180:intron | 20.0% |
| !!! | GTTGATGATATTGTAATTAT+CGG | + | chr4_4:50508755-50508774 | Msa0686180:intron | 20.0% |
| !! | TAATCTTCTTTATCAATTAG+GGG | + | chr4_4:50509787-50509806 | Msa0686180:intron | 20.0% |
| !!! | TTTTCATATCATATTATGTG+GGG | - | chr4_4:50506172-50506191 | None:intergenic | 20.0% |
| !!! | GTTTTTCATATCATATTATG+TGG | - | chr4_4:50506174-50506193 | None:intergenic | 20.0% |
| !!! | ATTATTTATTTAATGGATGC+AGG | + | chr4_4:50510278-50510297 | Msa0686180:intron | 20.0% |
| !!! | CATTTTTTTCACTTTTTTCT+CGG | - | chr4_4:50510358-50510377 | None:intergenic | 20.0% |
| !! | GAGAAAAAAGTGAAAAAAAT+GGG | + | chr4_4:50510357-50510376 | Msa0686180:exon | 20.0% |
| !! | AAAAACTAGTATTTGGGTTT+AGG | - | chr4_4:50503294-50503313 | None:intergenic | 25.0% |
| ! | AGTGTTTATGTGTATTGTAT+TGG | + | chr4_4:50503429-50503448 | Msa0686180:intron | 25.0% |
| !!! | TGATTTTGAAAGAAAGATGA+AGG | + | chr4_4:50503504-50503523 | Msa0686180:CDS | 25.0% |
| ! | TAAGTATGAGTATCAACAAA+AGG | - | chr4_4:50503581-50503600 | None:intergenic | 25.0% |
| ! | ATTGAAATTGGAGGATTTAA+AGG | + | chr4_4:50503762-50503781 | Msa0686180:CDS | 25.0% |
| ! | TTGAAATTGGAGGATTTAAA+GGG | + | chr4_4:50503763-50503782 | Msa0686180:CDS | 25.0% |
| ! | AGATAAATCAAATTTCAACG+AGG | - | chr4_4:50503888-50503907 | None:intergenic | 25.0% |
| ! | TATGAATTTGATTGTGAAGA+AGG | + | chr4_4:50504146-50504165 | Msa0686180:CDS | 25.0% |
| ! | ACTTAATTTCATTGTGAATC+AGG | - | chr4_4:50504469-50504488 | None:intergenic | 25.0% |
| ! | TGATTCACAATGAAATTAAG+TGG | + | chr4_4:50504468-50504487 | Msa0686180:CDS | 25.0% |
| !!! | GATATTTTTTATGTGAACTG+TGG | + | chr4_4:50504976-50504995 | Msa0686180:intron | 25.0% |
| ! | AATACTGCAATGTTAAACAA+TGG | + | chr4_4:50505015-50505034 | Msa0686180:intron | 25.0% |
| ! | TTGTAAATTTCATTACTGCA+AGG | - | chr4_4:50505056-50505075 | None:intergenic | 25.0% |
| ! | GGAATAATTAATTACAGGAT+AGG | + | chr4_4:50505335-50505354 | Msa0686180:intron | 25.0% |
| !!! | TTTGTATTTGGTGCTTTTTT+TGG | + | chr4_4:50505424-50505443 | Msa0686180:intron | 25.0% |
| ! | TTAGCAAACAAAAAACTTGA+GGG | - | chr4_4:50505569-50505588 | None:intergenic | 25.0% |
| ! | ATTAGCAAACAAAAAACTTG+AGG | - | chr4_4:50505570-50505589 | None:intergenic | 25.0% |
| ! | TTCAATGAACAGAATGATTT+GGG | + | chr4_4:50505652-50505671 | Msa0686180:CDS | 25.0% |
| ! | TAAAAAAAATTGATGCACCA+AGG | - | chr4_4:50505702-50505721 | None:intergenic | 25.0% |
| !!! | GTGCATCAATTTTTTTTAGA+TGG | + | chr4_4:50505704-50505723 | Msa0686180:CDS | 25.0% |
| ! | TATAATATCTCCATTAGCAA+AGG | - | chr4_4:50505743-50505762 | None:intergenic | 25.0% |
| ! | AATAAAGGCTAACAATACTA+CGG | + | chr4_4:50505778-50505797 | Msa0686180:CDS | 25.0% |
| ! | AATATAAAGAAACAAGACTC+GGG | - | chr4_4:50505998-50506017 | None:intergenic | 25.0% |
| ! | TTATTAATTAGGGGTTAACT+AGG | + | chr4_4:50506117-50506136 | Msa0686180:intron | 25.0% |
| !! | ACATATTTTCAGTCTTAAGA+TGG | + | chr4_4:50506192-50506211 | Msa0686180:intron | 25.0% |
| ! | ACAACAAGAAACAAAAAATC+AGG | - | chr4_4:50506342-50506361 | None:intergenic | 25.0% |
| !!! | TTGTTTCTTGTTGTTTAATG+GGG | + | chr4_4:50506348-50506367 | Msa0686180:intron | 25.0% |
| ! | TACGAATAACACATAATTCA+AGG | - | chr4_4:50506609-50506628 | None:intergenic | 25.0% |
| ! | CTGATTGAGATCAAATTAAA+AGG | - | chr4_4:50506641-50506660 | None:intergenic | 25.0% |
| !!! | TCGAATTGTTTTACCAAATT+GGG | - | chr4_4:50507161-50507180 | None:intergenic | 25.0% |
| !!! | TTCGAATTGTTTTACCAAAT+TGG | - | chr4_4:50507162-50507181 | None:intergenic | 25.0% |
| ! | AAAGGTTATACTCAAGTTTA+TGG | + | chr4_4:50508371-50508390 | Msa0686180:intron | 25.0% |
| ! | AAATTGAAAAAGTCCTTGTA+TGG | + | chr4_4:50508593-50508612 | Msa0686180:intron | 25.0% |
| ! | ATTTCAAAACTTTCAGACTA+AGG | + | chr4_4:50508817-50508836 | Msa0686180:intron | 25.0% |
| ! | ATATCTTTACTAAATCTCCA+CGG | + | chr4_4:50509621-50509640 | Msa0686180:intron | 25.0% |
| !!! | CGTTTTTTTCACTTTTTTCT+CGG | - | chr4_4:50510075-50510094 | None:intergenic | 25.0% |
| ! | CGAGAAAAAAGTGAAAAAAA+CGG | + | chr4_4:50510073-50510092 | Msa0686180:intron | 25.0% |
| ! | GAGAAAAAAGTGAAAAAAAC+GGG | + | chr4_4:50510074-50510093 | Msa0686180:intron | 25.0% |
| !!! | TGATTTTTGCTGTAAATAGA+CGG | + | chr4_4:50510115-50510134 | Msa0686180:intron | 25.0% |
| ! | TATTTGATAGAAACTGTTTG+TGG | + | chr4_4:50510158-50510177 | Msa0686180:intron | 25.0% |
| ! | CGAGAAAAAAGTGAAAAAAA+TGG | + | chr4_4:50510073-50510092 | Msa0686180:intron | 25.0% |
| GTTTATGTGTATTGTATTGG+TGG | + | chr4_4:50503432-50503451 | Msa0686180:intron | 30.0% | |
| ! | TATTGGTGGTATGAGATTAT+AGG | + | chr4_4:50503446-50503465 | Msa0686180:intron | 30.0% |
| ! | ATTGGTGGTATGAGATTATA+GGG | + | chr4_4:50503447-50503466 | Msa0686180:intron | 30.0% |
| !!! | TTATAGGGTTTTGTTTCAAC+AGG | + | chr4_4:50503462-50503481 | Msa0686180:intron | 30.0% |
| ! | GTTTTATAATCATCGTCATC+TGG | - | chr4_4:50503735-50503754 | None:intergenic | 30.0% |
| ACTAAAGTCATTGAAATTGG+AGG | + | chr4_4:50503753-50503772 | Msa0686180:CDS | 30.0% | |
| AAAGATTGATATGCCAATAC+AGG | + | chr4_4:50503837-50503856 | Msa0686180:intron | 30.0% | |
| TTTAGTTAGTAGGTAGTCAT+GGG | - | chr4_4:50503966-50503985 | None:intergenic | 30.0% | |
| TACCTACTAACTAAACGTTT+AGG | + | chr4_4:50503971-50503990 | Msa0686180:CDS | 30.0% | |
| TACCTAAACGTTTAGTTAGT+AGG | - | chr4_4:50503976-50503995 | None:intergenic | 30.0% | |
| TACTAACTAAACGTTTAGGT+AGG | + | chr4_4:50503975-50503994 | Msa0686180:intron | 30.0% | |
| TTCACAATCAAATTCATAGC+CGG | - | chr4_4:50504144-50504163 | None:intergenic | 30.0% | |
| AATTGCAGATTCAGATTCTT+GGG | + | chr4_4:50504201-50504220 | Msa0686180:CDS | 30.0% | |
| TCCTTATGTATGCATTATGT+TGG | + | chr4_4:50504228-50504247 | Msa0686180:intron | 30.0% | |
| ACCAACATAATGCATACATA+AGG | - | chr4_4:50504232-50504251 | None:intergenic | 30.0% | |
| TTAGCATGTCTTAGTTGATT+CGG | + | chr4_4:50504697-50504716 | Msa0686180:intron | 30.0% | |
| !!! | TTGTTTTTGAAGCAATGTCT+TGG | + | chr4_4:50504733-50504752 | Msa0686180:intron | 30.0% |
| ! | TTCATCATTTGTTAACCCAA+AGG | + | chr4_4:50504767-50504786 | Msa0686180:intron | 30.0% |
| ! | TCATCATTTGTTAACCCAAA+GGG | + | chr4_4:50504768-50504787 | Msa0686180:intron | 30.0% |
| GCATTACGAGATATTCATAA+TGG | + | chr4_4:50504790-50504809 | Msa0686180:intron | 30.0% | |
| ! | ACTGAATTTTGAACTCATGA+AGG | - | chr4_4:50504816-50504835 | None:intergenic | 30.0% |
| AAATGTTGTACAAACGTTGT+AGG | + | chr4_4:50505393-50505412 | Msa0686180:intron | 30.0% | |
| TAGGAGTCTAAGTTTGTATT+TGG | + | chr4_4:50505412-50505431 | Msa0686180:intron | 30.0% | |
| TGTACTTTCATGATAGAAAG+TGG | + | chr4_4:50505623-50505642 | Msa0686180:CDS | 30.0% | |
| GTTCAATGAACAGAATGATT+TGG | + | chr4_4:50505651-50505670 | Msa0686180:CDS | 30.0% | |
| GGAAAAGGAAGATGTAATTA+AGG | + | chr4_4:50505673-50505692 | Msa0686180:CDS | 30.0% | |
| CTAATGGAGATATTATACGA+TGG | + | chr4_4:50505746-50505765 | Msa0686180:CDS | 30.0% | |
| CGATGGTTATGAATCAATAA+AGG | + | chr4_4:50505763-50505782 | Msa0686180:CDS | 30.0% | |
| GGATAAGTTTGTCATATTTG+AGG | + | chr4_4:50505799-50505818 | Msa0686180:CDS | 30.0% | |
| !! | ATCAACAACCCTTTTAAGTA+GGG | - | chr4_4:50505864-50505883 | None:intergenic | 30.0% |
| !! | TATCAACAACCCTTTTAAGT+AGG | - | chr4_4:50505865-50505884 | None:intergenic | 30.0% |
| TTGTTCTTGACTATCTATTC+AGG | + | chr4_4:50505948-50505967 | Msa0686180:CDS | 30.0% | |
| GAATGTACATTTATATGGGT+AGG | - | chr4_4:50506148-50506167 | None:intergenic | 30.0% | |
| GGGAGAATGTACATTTATAT+GGG | - | chr4_4:50506152-50506171 | None:intergenic | 30.0% | |
| !!! | TGAAATCCTAGTTTTGTCTT+TGG | + | chr4_4:50506232-50506251 | Msa0686180:intron | 30.0% |
| !!! | GAAATCCTAGTTTTGTCTTT+GGG | + | chr4_4:50506233-50506252 | Msa0686180:intron | 30.0% |
| ! | CTTTTCTCAATTCAGTTGTT+CGG | + | chr4_4:50506299-50506318 | Msa0686180:intron | 30.0% |
| !!! | AGATCATTGGTTTTAGATTC+TGG | + | chr4_4:50506443-50506462 | Msa0686180:intron | 30.0% |
| GACAAATTAGAGATAAGAGA+GGG | - | chr4_4:50506494-50506513 | None:intergenic | 30.0% | |
| TGACAAATTAGAGATAAGAG+AGG | - | chr4_4:50506495-50506514 | None:intergenic | 30.0% | |
| ACATAATTCAAGGATAGAGA+TGG | - | chr4_4:50506599-50506618 | None:intergenic | 30.0% | |
| ! | AATTATGTGTTATTCGTACC+TGG | + | chr4_4:50506611-50506630 | Msa0686180:intron | 30.0% |
| ATCAAATTAAAAGGACTTCC+AGG | - | chr4_4:50506632-50506651 | None:intergenic | 30.0% | |
| TCCAAGTTTGGATAAGTTAA+AGG | + | chr4_4:50506850-50506869 | Msa0686180:intron | 30.0% | |
| ! | ACCTTTAACTTATCCAAACT+TGG | - | chr4_4:50506854-50506873 | None:intergenic | 30.0% |
| CCAATGACTTTAAATGTGAA+AGG | - | chr4_4:50506889-50506908 | None:intergenic | 30.0% | |
| ! | CCTTTCACATTTAAAGTCAT+TGG | + | chr4_4:50506886-50506905 | Msa0686180:intron | 30.0% |
| TCAGAATGGATGATATCAAA+GGG | - | chr4_4:50506986-50507005 | None:intergenic | 30.0% | |
| ATCAGAATGGATGATATCAA+AGG | - | chr4_4:50506987-50507006 | None:intergenic | 30.0% | |
| ATATCATCCATTCTGATGTT+TGG | + | chr4_4:50506990-50507009 | Msa0686180:intron | 30.0% | |
| TATCATCCATTCTGATGTTT+GGG | + | chr4_4:50506991-50507010 | Msa0686180:intron | 30.0% | |
| TCAGAGATAAAAACCCAATT+TGG | + | chr4_4:50507145-50507164 | Msa0686180:intron | 30.0% | |
| TGAAAGAAAACATCGTCATT+TGG | + | chr4_4:50507300-50507319 | Msa0686180:intron | 30.0% | |
| TTAGGAAACAAAAGTGAGTA+TGG | - | chr4_4:50507448-50507467 | None:intergenic | 30.0% | |
| !! | ATACTCACTTTTGTTTCCTA+AGG | + | chr4_4:50507447-50507466 | Msa0686180:intron | 30.0% |
| !! | GGATATTCTAAAACCCAAAA+GGG | + | chr4_4:50507580-50507599 | Msa0686180:intron | 30.0% |
| !! | GATATTCTAAAACCCAAAAG+GGG | + | chr4_4:50507581-50507600 | Msa0686180:intron | 30.0% |
| AGCAGATGTTAATTTCTTTG+AGG | + | chr4_4:50507645-50507664 | Msa0686180:intron | 30.0% | |
| CTTGGATTATTGGAATCAAT+AGG | - | chr4_4:50507910-50507929 | None:intergenic | 30.0% | |
| AATCACTAGAATTAGTAGCA+GGG | - | chr4_4:50507941-50507960 | None:intergenic | 30.0% | |
| TTATCTTTACGAAGAGCAAT+AGG | - | chr4_4:50508023-50508042 | None:intergenic | 30.0% | |
| TTGCTCTTCGTAAAGATAAA+AGG | + | chr4_4:50508024-50508043 | Msa0686180:intron | 30.0% | |
| ATAAATAGGATGAGGATTAG+CGG | - | chr4_4:50508054-50508073 | None:intergenic | 30.0% | |
| TTATACTCAAGTTTATGGTC+AGG | + | chr4_4:50508376-50508395 | Msa0686180:intron | 30.0% | |
| TTTGATATCCAACTGAAACA+GGG | - | chr4_4:50508483-50508502 | None:intergenic | 30.0% | |
| ! | TTTTGATATCCAACTGAAAC+AGG | - | chr4_4:50508484-50508503 | None:intergenic | 30.0% |
| ATCAAAAATGCTTTCTTGCA+TGG | + | chr4_4:50508497-50508516 | Msa0686180:intron | 30.0% | |
| CTTGGAAGAAGAGATTTATA+TGG | + | chr4_4:50508523-50508542 | Msa0686180:intron | 30.0% | |
| TATCATCAACATAAACCACA+AGG | - | chr4_4:50508745-50508764 | None:intergenic | 30.0% | |
| TTGTTTCCTCCAAAATATCA+AGG | - | chr4_4:50508924-50508943 | None:intergenic | 30.0% | |
| TTAGGAAGAAGCTTTACATT+AGG | - | chr4_4:50508985-50509004 | None:intergenic | 30.0% | |
| AATACCCAACAATATTTGTG+TGG | - | chr4_4:50509221-50509240 | None:intergenic | 30.0% | |
| !! | TTCTGGTTATTGCATTTTTG+TGG | + | chr4_4:50509284-50509303 | Msa0686180:intron | 30.0% |
| ! | TCTGGTTATTGCATTTTTGT+GGG | + | chr4_4:50509285-50509304 | Msa0686180:intron | 30.0% |
| TCTTAGAGAGAAGATTATCA+CGG | + | chr4_4:50509554-50509573 | Msa0686180:intron | 30.0% | |
| AACTTACATATGTGACAAGA+TGG | + | chr4_4:50509655-50509674 | Msa0686180:intron | 30.0% | |
| TTATCAATTAGGGGTTAACT+AGG | + | chr4_4:50509796-50509815 | Msa0686180:intron | 30.0% | |
| GAATGTACATTTATATGGGT+AGG | - | chr4_4:50506148-50506167 | None:intergenic | 30.0% | |
| GGGAGAATGTACATTTATAT+GGG | - | chr4_4:50506152-50506171 | None:intergenic | 30.0% | |
| !! | GATTTTTGCTGTAAATAGAC+GGG | + | chr4_4:50510116-50510135 | Msa0686180:intron | 30.0% |
| !! | ATTTTTGCTGTAAATAGACG+GGG | + | chr4_4:50510117-50510136 | Msa0686180:intron | 30.0% |
| AAAAAAATGGGAGAAGCAAA+AGG | + | chr4_4:50510369-50510388 | Msa0686180:exon | 30.0% | |
| ! | AACTAGTATTTGGGTTTAGG+TGG | - | chr4_4:50503291-50503310 | None:intergenic | 35.0% |
| TGAAAGAAAGATGAAGGTGA+AGG | + | chr4_4:50503510-50503529 | Msa0686180:CDS | 35.0% | |
| TCATCGTCATCTGGATAATT+CGG | - | chr4_4:50503726-50503745 | None:intergenic | 35.0% | |
| AATTTCACAGCTGTTCATAC+TGG | + | chr4_4:50503860-50503879 | Msa0686180:CDS | 35.0% | |
| TTAGTTAGTAGGTAGTCATG+GGG | - | chr4_4:50503965-50503984 | None:intergenic | 35.0% | |
| GTTTAGTTAGTAGGTAGTCA+TGG | - | chr4_4:50503967-50503986 | None:intergenic | 35.0% | |
| TATAACCATCACAAAGTGAG+TGG | - | chr4_4:50504121-50504140 | None:intergenic | 35.0% | |
| TCACTTTGTGATGGTTATAC+CGG | + | chr4_4:50504122-50504141 | Msa0686180:CDS | 35.0% | |
| GAATTGCAGATTCAGATTCT+TGG | + | chr4_4:50504200-50504219 | Msa0686180:CDS | 35.0% | |
| ACAATGAAATTAAGTGGCCA+AGG | + | chr4_4:50504474-50504493 | Msa0686180:CDS | 35.0% | |
| CAACTAAGACATGCTAAACA+TGG | - | chr4_4:50504694-50504713 | None:intergenic | 35.0% | |
| AATATCTCGTAATGCCCTTT+GGG | - | chr4_4:50504785-50504804 | None:intergenic | 35.0% | |
| ATCATCAGATTCGAATGAGA+GGG | - | chr4_4:50504852-50504871 | None:intergenic | 35.0% | |
| TATCATCAGATTCGAATGAG+AGG | - | chr4_4:50504853-50504872 | None:intergenic | 35.0% | |
| CTGCAATGTTAAACAATGGA+TGG | + | chr4_4:50505019-50505038 | Msa0686180:intron | 35.0% | |
| ! | GAACAGAATGATTTGGGAAA+AGG | + | chr4_4:50505658-50505677 | Msa0686180:CDS | 35.0% |
| AGATGTAATTAAGGAAGCCT+TGG | + | chr4_4:50505682-50505701 | Msa0686180:CDS | 35.0% | |
| TTGTCATATTTGAGGACGAA+TGG | + | chr4_4:50505807-50505826 | Msa0686180:CDS | 35.0% | |
| GGGACAATGCTTTCATATAT+AGG | - | chr4_4:50505899-50505918 | None:intergenic | 35.0% | |
| CAATCATACAACCAAACTGT+GGG | - | chr4_4:50505919-50505938 | None:intergenic | 35.0% | |
| ACAATCATACAACCAAACTG+TGG | - | chr4_4:50505920-50505939 | None:intergenic | 35.0% | |
| ACAGTTTGGTTGTATGATTG+TGG | + | chr4_4:50505919-50505938 | Msa0686180:CDS | 35.0% | |
| GGGGAGAATGTACATTTATA+TGG | - | chr4_4:50506153-50506172 | None:intergenic | 35.0% | |
| ATGATCTAGTAGAGTGAGAT+AGG | - | chr4_4:50506430-50506449 | None:intergenic | 35.0% | |
| ATCTCACTCTACTAGATCAT+TGG | + | chr4_4:50506430-50506449 | Msa0686180:intron | 35.0% | |
| ! | GTAATGTTGTGAGGTATCTT+AGG | - | chr4_4:50506521-50506540 | None:intergenic | 35.0% |
| GTCTTGTATAAGGAAAGAGT+CGG | - | chr4_4:50506705-50506724 | None:intergenic | 35.0% | |
| AAACGACGATGAATGATATC+TGG | - | chr4_4:50506824-50506843 | None:intergenic | 35.0% | |
| AGATATCATTCATCGTCGTT+TGG | + | chr4_4:50506823-50506842 | Msa0686180:intron | 35.0% | |
| GATATCATTCATCGTCGTTT+GGG | + | chr4_4:50506824-50506843 | Msa0686180:intron | 35.0% | |
| GACTTTAAATGTGAAAGGTG+AGG | - | chr4_4:50506884-50506903 | None:intergenic | 35.0% | |
| ! | GATCTTTTATTGACACGACT+TGG | - | chr4_4:50506956-50506975 | None:intergenic | 35.0% |
| ATCATCCATTCTGATGTTTG+GGG | + | chr4_4:50506992-50507011 | Msa0686180:intron | 35.0% | |
| TTCTGAACGATCCTTCAATA+AGG | - | chr4_4:50507098-50507117 | None:intergenic | 35.0% | |
| CTCTGAACAAAACGTTTGAA+AGG | - | chr4_4:50507131-50507150 | None:intergenic | 35.0% | |
| TACATCATTCAACTCCTTCT+TGG | + | chr4_4:50507216-50507235 | Msa0686180:intron | 35.0% | |
| ! | TCATGCACCTTTCAGATTTT+GGG | + | chr4_4:50507354-50507373 | Msa0686180:intron | 35.0% |
| CATGCGGTTTATCAAATAAC+AGG | - | chr4_4:50507398-50507417 | None:intergenic | 35.0% | |
| ! | AGCTGTCAAATGTGTGTTTT+TGG | + | chr4_4:50507558-50507577 | Msa0686180:intron | 35.0% |
| ! | GCTGTCAAATGTGTGTTTTT+GGG | + | chr4_4:50507559-50507578 | Msa0686180:intron | 35.0% |
| !! | GGGATATTCTAAAACCCAAA+AGG | + | chr4_4:50507579-50507598 | Msa0686180:intron | 35.0% |
| ! | ATAACAACGATACCCCTTTT+GGG | - | chr4_4:50507596-50507615 | None:intergenic | 35.0% |
| ! | AATAACAACGATACCCCTTT+TGG | - | chr4_4:50507597-50507616 | None:intergenic | 35.0% |
| ACATAAAAACGATGTGCAGA+TGG | - | chr4_4:50507622-50507641 | None:intergenic | 35.0% | |
| AATGGCTCAAATAGAGGAAT+GGG | - | chr4_4:50507748-50507767 | None:intergenic | 35.0% | |
| AAATGGCTCAAATAGAGGAA+TGG | - | chr4_4:50507749-50507768 | None:intergenic | 35.0% | |
| !! | GGATTTTGAGTAGAGACAAA+TGG | - | chr4_4:50507766-50507785 | None:intergenic | 35.0% |
| GAATCACTAGAATTAGTAGC+AGG | - | chr4_4:50507942-50507961 | None:intergenic | 35.0% | |
| AGAGCAATAGGTAAGTCAAT+AGG | - | chr4_4:50508011-50508030 | None:intergenic | 35.0% | |
| ! | AATGCTTCATGAAGTGTCTT+AGG | - | chr4_4:50508149-50508168 | None:intergenic | 35.0% |
| ! | ATGAAGCATTATCTCATCCA+GGG | + | chr4_4:50508159-50508178 | Msa0686180:intron | 35.0% |
| GTTAGAATCAAACCAAACGT+GGG | + | chr4_4:50508238-50508257 | Msa0686180:intron | 35.0% | |
| ! | ACAATAGATTTTCCAAGAGG+AGG | - | chr4_4:50508275-50508294 | None:intergenic | 35.0% |
| ! | CCAACAATAGATTTTCCAAG+AGG | - | chr4_4:50508278-50508297 | None:intergenic | 35.0% |
| CCTCTTGGAAAATCTATTGT+TGG | + | chr4_4:50508275-50508294 | Msa0686180:intron | 35.0% | |
| ! | GAAAATCTATTGTTGGTTGC+AGG | + | chr4_4:50508282-50508301 | Msa0686180:intron | 35.0% |
| TGGGTGTTTAATGTCAAAGT+GGG | + | chr4_4:50508305-50508324 | Msa0686180:intron | 35.0% | |
| TTGATATCCAACTGAAACAG+GGG | - | chr4_4:50508482-50508501 | None:intergenic | 35.0% | |
| CGATTGTTTCAATCCATACA+AGG | - | chr4_4:50508609-50508628 | None:intergenic | 35.0% | |
| AGCAAAGTTCTACAACAGTT+TGG | + | chr4_4:50508653-50508672 | Msa0686180:intron | 35.0% | |
| GCAAAGTTCTACAACAGTTT+GGG | + | chr4_4:50508654-50508673 | Msa0686180:intron | 35.0% | |
| ATTATCGGTGATGATTACGA+AGG | + | chr4_4:50508770-50508789 | Msa0686180:intron | 35.0% | |
| !! | TGATGATTACGAAGGTATCA+AGG | + | chr4_4:50508778-50508797 | Msa0686180:intron | 35.0% |
| AACTTTCAGACTAAGGACTT+AGG | + | chr4_4:50508824-50508843 | Msa0686180:intron | 35.0% | |
| !! | GGAAGTATGCCTTGATATTT+TGG | + | chr4_4:50508912-50508931 | Msa0686180:intron | 35.0% |
| !! | AGTATGCCTTGATATTTTGG+AGG | + | chr4_4:50508915-50508934 | Msa0686180:intron | 35.0% |
| ! | TAAACCAGTTGATACTCCTA+TGG | + | chr4_4:50508957-50508976 | Msa0686180:intron | 35.0% |
| AGCTTTACATTAGGATCCAT+AGG | - | chr4_4:50508976-50508995 | None:intergenic | 35.0% | |
| TAAAGCTTCTTCCTAACCAA+GGG | + | chr4_4:50508989-50509008 | Msa0686180:intron | 35.0% | |
| TATCTGCCTGGATCATAATA+GGG | - | chr4_4:50509018-50509037 | None:intergenic | 35.0% | |
| !! | AAGTATAACAAAAGAGCACC+CGG | + | chr4_4:50509168-50509187 | Msa0686180:intron | 35.0% |
| ! | AGTGAAAACAAGTCCTTTTC+CGG | - | chr4_4:50509190-50509209 | None:intergenic | 35.0% |
| ! | GCAAGAATTACATTTTTGCG+AGG | + | chr4_4:50509428-50509447 | Msa0686180:intron | 35.0% |
| ! | GAATTACATTTTTGCGAGGT+AGG | + | chr4_4:50509432-50509451 | Msa0686180:intron | 35.0% |
| AACCTCATTTGTCAATTCCA+AGG | + | chr4_4:50509586-50509605 | Msa0686180:intron | 35.0% | |
| ATCCTTGGAATTGACAAATG+AGG | - | chr4_4:50509591-50509610 | None:intergenic | 35.0% | |
| TCACATATGTAAGTTATCCG+AGG | - | chr4_4:50509650-50509669 | None:intergenic | 35.0% | |
| TACATATGTGACAAGATGGA+TGG | + | chr4_4:50509659-50509678 | Msa0686180:intron | 35.0% | |
| GGGGAGAATGTACATTTATA+TGG | - | chr4_4:50506153-50506172 | None:intergenic | 35.0% | |
| ! | TGTGATACAATAGTGTTGCT+AGG | + | chr4_4:50509923-50509942 | Msa0686180:intron | 35.0% |
| AAAAAAACGGGAGAAGCAAA+AGG | + | chr4_4:50510086-50510105 | Msa0686180:intron | 35.0% | |
| ! | TGTGATACAATAGTGTTGCT+AGG | + | chr4_4:50509923-50509942 | Msa0686180:intron | 35.0% |
| TCTCTCTCTACTCTTACGAT+CGG | - | chr4_4:50503326-50503345 | None:intergenic | 40.0% | |
| TCATCTGGATAATTCGGCTT+TGG | - | chr4_4:50503720-50503739 | None:intergenic | 40.0% | |
| CAGCTGTGAAATTCCTGTAT+TGG | - | chr4_4:50503853-50503872 | None:intergenic | 40.0% | |
| GTGCTCAGTGCATAAAACAT+TGG | - | chr4_4:50503926-50503945 | None:intergenic | 40.0% | |
| TAGTTAGTAGGTAGTCATGG+GGG | - | chr4_4:50503964-50503983 | None:intergenic | 40.0% | |
| CTATTCCACTCACTTTGTGA+TGG | + | chr4_4:50504113-50504132 | Msa0686180:CDS | 40.0% | |
| ! | AGAAGGTTTTCTTGACGATG+AGG | + | chr4_4:50504163-50504182 | Msa0686180:CDS | 40.0% |
| ! | GAAGGTTTTCTTGACGATGA+GGG | + | chr4_4:50504164-50504183 | Msa0686180:CDS | 40.0% |
| CGATACTTCTTTACAAGGAG+AGG | - | chr4_4:50504362-50504381 | None:intergenic | 40.0% | |
| CAGCTCGATACTTCTTTACA+AGG | - | chr4_4:50504367-50504386 | None:intergenic | 40.0% | |
| GAATATCTCGTAATGCCCTT+TGG | - | chr4_4:50504786-50504805 | None:intergenic | 40.0% | |
| AGAACCATTCTCATCTCAGT+GGG | - | chr4_4:50505108-50505127 | None:intergenic | 40.0% | |
| !!! | GAAGAAGAGCATACTGGTTT+TGG | - | chr4_4:50505156-50505175 | None:intergenic | 40.0% |
| TGAGTAACTAAATGGACACG+TGG | - | chr4_4:50505218-50505237 | None:intergenic | 40.0% | |
| !! | TTCCACAATTTGCTATTCCC+GGG | - | chr4_4:50505278-50505297 | None:intergenic | 40.0% |
| !! | CTTCCACAATTTGCTATTCC+CGG | - | chr4_4:50505279-50505298 | None:intergenic | 40.0% |
| AAGGACTAAGTCAATTCCAC+TGG | + | chr4_4:50505296-50505315 | Msa0686180:intron | 40.0% | |
| !! | TATTTCTAAGGAAGTGCCAG+TGG | - | chr4_4:50505315-50505334 | None:intergenic | 40.0% |
| ACTGGCACTTCCTTAGAAAT+AGG | + | chr4_4:50505314-50505333 | Msa0686180:intron | 40.0% | |
| TGTGACATCTCCTTTGCTAA+TGG | + | chr4_4:50505730-50505749 | Msa0686180:CDS | 40.0% | |
| ATGTGCCATCCCTACTTAAA+AGG | + | chr4_4:50505852-50505871 | Msa0686180:CDS | 40.0% | |
| TGTGCCATCCCTACTTAAAA+GGG | + | chr4_4:50505853-50505872 | Msa0686180:CDS | 40.0% | |
| !! | ACAACCCTTTTAAGTAGGGA+TGG | - | chr4_4:50505860-50505879 | None:intergenic | 40.0% |
| TTAAGATGGTATCCAGTGCA+TGG | + | chr4_4:50506206-50506225 | Msa0686180:intron | 40.0% | |
| CTGAACCCAAAGACAAAACT+AGG | - | chr4_4:50506241-50506260 | None:intergenic | 40.0% | |
| !! | TTCAGTTGTTCGGTGTTCAA+AGG | + | chr4_4:50506309-50506328 | Msa0686180:intron | 40.0% |
| !! | TCAGTTGTTCGGTGTTCAAA+GGG | + | chr4_4:50506310-50506329 | Msa0686180:intron | 40.0% |
| GTTGTTGAAATGAGCCAATG+TGG | - | chr4_4:50506396-50506415 | None:intergenic | 40.0% | |
| GGCTCATTTCAACAACTCTA+CGG | + | chr4_4:50506400-50506419 | Msa0686180:intron | 40.0% | |
| ! | GGTGCTTTTGATCATGTTGT+TGG | + | chr4_4:50506464-50506483 | Msa0686180:intron | 40.0% |
| ! | ATGTTGTGAGGTATCTTAGG+AGG | - | chr4_4:50506518-50506537 | None:intergenic | 40.0% |
| CTAGCAACAGTAATGTTGTG+AGG | - | chr4_4:50506530-50506549 | None:intergenic | 40.0% | |
| CACAACATTACTGTTGCTAG+TGG | + | chr4_4:50506530-50506549 | Msa0686180:intron | 40.0% | |
| ! | TACTGTTGCTAGTGGTTCTA+AGG | + | chr4_4:50506538-50506557 | Msa0686180:intron | 40.0% |
| AAGGCACAAGTTACTGGTAT+TGG | + | chr4_4:50506557-50506576 | Msa0686180:intron | 40.0% | |
| CCTTATACAAGACCGAAGTA+CGG | + | chr4_4:50506712-50506731 | Msa0686180:intron | 40.0% | |
| CTTATACAAGACCGAAGTAC+GGG | + | chr4_4:50506713-50506732 | Msa0686180:intron | 40.0% | |
| CAATTGTCTTTCCCGTACTT+CGG | - | chr4_4:50506727-50506746 | None:intergenic | 40.0% | |
| !! | AAATGGTGGATGGATGAGAA+TGG | - | chr4_4:50506784-50506803 | None:intergenic | 40.0% |
| AGATGCAGAAACACCACAAA+TGG | - | chr4_4:50506801-50506820 | None:intergenic | 40.0% | |
| GATTGTGAATCATGTCAGCT+TGG | + | chr4_4:50506908-50506927 | Msa0686180:intron | 40.0% | |
| TAAGACCCCAAACATCAGAA+TGG | - | chr4_4:50507000-50507019 | None:intergenic | 40.0% | |
| ATGATTTCTCTAGATGCACC+TGG | + | chr4_4:50507068-50507087 | Msa0686180:intron | 40.0% | |
| ATCCTTCAATAAGGTGATCC+AGG | - | chr4_4:50507089-50507108 | None:intergenic | 40.0% | |
| AATACCATGAGAAGCCAAGA+AGG | - | chr4_4:50507233-50507252 | None:intergenic | 40.0% | |
| ! | CTCATGCACCTTTCAGATTT+TGG | + | chr4_4:50507353-50507372 | Msa0686180:intron | 40.0% |
| ! | CATGCACCTTTCAGATTTTG+GGG | + | chr4_4:50507355-50507374 | Msa0686180:intron | 40.0% |
| CAAATAACAGGCAGTGAGAA+TGG | - | chr4_4:50507386-50507405 | None:intergenic | 40.0% | |
| TCATTACCCAATACCGATGA+TGG | - | chr4_4:50507421-50507440 | None:intergenic | 40.0% | |
| TAGATCCAAACACACGAAGA+GGG | - | chr4_4:50507489-50507508 | None:intergenic | 40.0% | |
| TTTGTACATGATCTCTCTCC+TGG | + | chr4_4:50507514-50507533 | Msa0686180:intron | 40.0% | |
| CTCGAGCAGACAATTTATCA+CGG | - | chr4_4:50507540-50507559 | None:intergenic | 40.0% | |
| GTTGTAGAACCAGATGTAGT+GGG | - | chr4_4:50507691-50507710 | None:intergenic | 40.0% | |
| AGTTGTAGAACCAGATGTAG+TGG | - | chr4_4:50507692-50507711 | None:intergenic | 40.0% | |
| GAGACAAATGGCTCAAATAG+AGG | - | chr4_4:50507754-50507773 | None:intergenic | 40.0% | |
| ! | GAATCAATAGGAGCTGTTTC+TGG | - | chr4_4:50507852-50507871 | None:intergenic | 40.0% |
| GTCGACGAATTGGAATCAAT+AGG | - | chr4_4:50507864-50507883 | None:intergenic | 40.0% | |
| GGTCTTAGGACTTGGATTAT+TGG | - | chr4_4:50507920-50507939 | None:intergenic | 40.0% | |
| AGAATTAGTAGCAGGGTCTT+AGG | - | chr4_4:50507934-50507953 | None:intergenic | 40.0% | |
| GAAACAAAAGCCAAGTAGGA+AGG | - | chr4_4:50508104-50508123 | None:intergenic | 40.0% | |
| AGCAGAAACAAAAGCCAAGT+AGG | - | chr4_4:50508108-50508127 | None:intergenic | 40.0% | |
| ! | CATGAAGCATTATCTCATCC+AGG | + | chr4_4:50508158-50508177 | Msa0686180:intron | 40.0% |
| CGCAATCATCTCATCAATCA+TGG | - | chr4_4:50508219-50508238 | None:intergenic | 40.0% | |
| CGTTAGAATCAAACCAAACG+TGG | + | chr4_4:50508237-50508256 | Msa0686180:intron | 40.0% | |
| ! | ATAGATTTTCCAAGAGGAGG+TGG | - | chr4_4:50508272-50508291 | None:intergenic | 40.0% |
| ! | AATCTATTGTTGGTTGCAGG+TGG | + | chr4_4:50508285-50508304 | Msa0686180:intron | 40.0% |
| ! | ATCTATTGTTGGTTGCAGGT+GGG | + | chr4_4:50508286-50508305 | Msa0686180:intron | 40.0% |
| GTGGGTGTTTAATGTCAAAG+TGG | + | chr4_4:50508304-50508323 | Msa0686180:intron | 40.0% | |
| !! | TGGACAGGTTGATCGATTAA+AGG | + | chr4_4:50508334-50508353 | Msa0686180:intron | 40.0% |
| ! | AGGTTGATCGATTAAAGGCT+CGG | + | chr4_4:50508339-50508358 | Msa0686180:intron | 40.0% |
| TGTTCGCCTCTTTATAGCTA+TGG | + | chr4_4:50508439-50508458 | Msa0686180:intron | 40.0% | |
| ATTTATATGGAGCAACCTCC+TGG | + | chr4_4:50508536-50508555 | Msa0686180:intron | 40.0% | |
| TTTATATGGAGCAACCTCCT+GGG | + | chr4_4:50508537-50508556 | Msa0686180:intron | 40.0% | |
| ! | AGAATGATCTGATTCGCAAC+GGG | - | chr4_4:50508684-50508703 | None:intergenic | 40.0% |
| ! | CAGAATGATCTGATTCGCAA+CGG | - | chr4_4:50508685-50508704 | None:intergenic | 40.0% |
| TTACTTTCTCGGGATTGAAG+TGG | + | chr4_4:50508856-50508875 | Msa0686180:intron | 40.0% | |
| GAAGTGGCTCAATCAAACTT+TGG | + | chr4_4:50508872-50508891 | Msa0686180:intron | 40.0% | |
| GTAAAGCTTCTTCCTAACCA+AGG | + | chr4_4:50508988-50509007 | Msa0686180:intron | 40.0% | |
| AAAGCTTCTTCCTAACCAAG+GGG | + | chr4_4:50508990-50509009 | Msa0686180:intron | 40.0% | |
| GTATCTGCCTGGATCATAAT+AGG | - | chr4_4:50509019-50509038 | None:intergenic | 40.0% | |
| !! | TCAACTTTCCCACTAGTCTT+CGG | - | chr4_4:50509041-50509060 | None:intergenic | 40.0% |
| TTATCTCACCTTGACCAGAT+CGG | + | chr4_4:50509062-50509081 | Msa0686180:intron | 40.0% | |
| TGGAAAAGATATGTCCGATC+TGG | - | chr4_4:50509079-50509098 | None:intergenic | 40.0% | |
| ACTCTCCTTGTGTCAATCAT+TGG | + | chr4_4:50509124-50509143 | Msa0686180:intron | 40.0% | |
| GCATTCCAATGATTGACACA+AGG | - | chr4_4:50509132-50509151 | None:intergenic | 40.0% | |
| ! | GTGAAAACAAGTCCTTTTCC+GGG | - | chr4_4:50509189-50509208 | None:intergenic | 40.0% |
| !! | GGACTTGTTTTCACTGATAG+AGG | + | chr4_4:50509195-50509214 | Msa0686180:intron | 40.0% |
| AGAGGCCACACAAATATTGT+TGG | + | chr4_4:50509213-50509232 | Msa0686180:intron | 40.0% | |
| GAGGCCACACAAATATTGTT+GGG | + | chr4_4:50509214-50509233 | Msa0686180:intron | 40.0% | |
| CATGAGATGCAAGTGATAGA+CGG | + | chr4_4:50509256-50509275 | Msa0686180:intron | 40.0% | |
| ! | GGTTATTGCATTTTTGTGGG+CGG | + | chr4_4:50509288-50509307 | Msa0686180:intron | 40.0% |
| ATACTACATGTGAGCTTGTG+TGG | + | chr4_4:50509391-50509410 | Msa0686180:intron | 40.0% | |
| ! | TTTTTGCGAGGTAGGTCAAA+TGG | + | chr4_4:50509440-50509459 | Msa0686180:intron | 40.0% |
| TTTGTCCTCTCGTGAAAAAC+TGG | - | chr4_4:50509510-50509529 | None:intergenic | 40.0% | |
| !! | GATATCAGCAAGTTGATCCT+TGG | - | chr4_4:50509606-50509625 | None:intergenic | 40.0% |
| !! | CAATAGTGTTGCTAGGCTTT+TGG | + | chr4_4:50509930-50509949 | Msa0686180:intron | 40.0% |
| TAGAATATGATCAGCCTGCA+CGG | - | chr4_4:50509972-50509991 | None:intergenic | 40.0% | |
| !! | CAATAGTGTTGCTAGGCTTT+TGG | + | chr4_4:50509930-50509949 | Msa0686180:intron | 40.0% |
| TAGAATATGATCAGCCTGCA+CGG | - | chr4_4:50509972-50509991 | None:intergenic | 40.0% | |
| GTGACTCAATCGAACTGAAA+AGG | + | chr4_4:50510329-50510348 | Msa0686180:CDS | 40.0% | |
| AGAGTAGAGAGAGAGAGAGA+CGG | + | chr4_4:50503332-50503351 | Msa0686180:five_prime_UTR | 45.0% | |
| CTCTCTCAGGTAGGGATATT+CGG | + | chr4_4:50503616-50503635 | Msa0686180:intron | 45.0% | |
| ACTTCTTTACAAGGAGAGGC+TGG | - | chr4_4:50504358-50504377 | None:intergenic | 45.0% | |
| ! | GTATCGAGCTGAGCTTCTTT+TGG | + | chr4_4:50504376-50504395 | Msa0686180:CDS | 45.0% |
| CGAGTAAGCATCTCGTCATT+AGG | + | chr4_4:50504655-50504674 | Msa0686180:intron | 45.0% | |
| ! | GGGAGAGTATGCTGAAATCA+GGG | - | chr4_4:50504876-50504895 | None:intergenic | 45.0% |
| TAGCATTTCGAGCTCAACCT+GGG | - | chr4_4:50504898-50504917 | None:intergenic | 45.0% | |
| TTAGCATTTCGAGCTCAACC+TGG | - | chr4_4:50504899-50504918 | None:intergenic | 45.0% | |
| AACCATTCTCATCTCAGTGG+GGG | - | chr4_4:50505106-50505125 | None:intergenic | 45.0% | |
| GAACCATTCTCATCTCAGTG+GGG | - | chr4_4:50505107-50505126 | None:intergenic | 45.0% | |
| GAGAACCATTCTCATCTCAG+TGG | - | chr4_4:50505109-50505128 | None:intergenic | 45.0% | |
| !!! | CTGGTTTTGGAGATGGAAGT+GGG | - | chr4_4:50505143-50505162 | None:intergenic | 45.0% |
| !!! | ACTGGTTTTGGAGATGGAAG+TGG | - | chr4_4:50505144-50505163 | None:intergenic | 45.0% |
| !!! | GAGCATACTGGTTTTGGAGA+TGG | - | chr4_4:50505150-50505169 | None:intergenic | 45.0% |
| GAGGAAAAGATTGACCCAAG+GGG | - | chr4_4:50505182-50505201 | None:intergenic | 45.0% | |
| GGAGGAAAAGATTGACCCAA+GGG | - | chr4_4:50505183-50505202 | None:intergenic | 45.0% | |
| TGGAGGAAAAGATTGACCCA+AGG | - | chr4_4:50505184-50505203 | None:intergenic | 45.0% | |
| CTCATCACTCTTGTCAAACG+CGG | + | chr4_4:50505247-50505266 | Msa0686180:intron | 45.0% | |
| CGGGAATAGCAAATTGTGGA+AGG | + | chr4_4:50505277-50505296 | Msa0686180:intron | 45.0% | |
| TGAGGACGAATGGTTTGAGT+TGG | + | chr4_4:50505817-50505836 | Msa0686180:CDS | 45.0% | |
| !! | GAAAGCATTGTCCCACAGTT+TGG | + | chr4_4:50505905-50505924 | Msa0686180:CDS | 45.0% |
| AGGATTTCAGAACCATGCAC+TGG | - | chr4_4:50506221-50506240 | None:intergenic | 45.0% | |
| AATGTGGCTGAAGAGGAAAC+TGG | - | chr4_4:50506380-50506399 | None:intergenic | 45.0% | |
| AGTTTCCTCTTCAGCCACAT+TGG | + | chr4_4:50506379-50506398 | Msa0686180:intron | 45.0% | |
| !! | GGTTCTAAGGCACAAGTTAC+TGG | + | chr4_4:50506551-50506570 | Msa0686180:intron | 45.0% |
| TTCAAGGATAGAGATGGCAG+AGG | - | chr4_4:50506593-50506612 | None:intergenic | 45.0% | |
| ! | CCGTACTTCGGTCTTGTATA+AGG | - | chr4_4:50506715-50506734 | None:intergenic | 45.0% |
| CGAAGTACGGGAAAGACAAT+TGG | + | chr4_4:50506725-50506744 | Msa0686180:intron | 45.0% | |
| ACGGGAAAGACAATTGGAAC+AGG | + | chr4_4:50506731-50506750 | Msa0686180:intron | 45.0% | |
| TGGAACAGGATCTCAATCAC+AGG | + | chr4_4:50506745-50506764 | Msa0686180:intron | 45.0% | |
| GGAACAGGATCTCAATCACA+GGG | + | chr4_4:50506746-50506765 | Msa0686180:intron | 45.0% | |
| TCTCATCCATCCACCATTTG+TGG | + | chr4_4:50506785-50506804 | Msa0686180:intron | 45.0% | |
| ! | GAAACACCACAAATGGTGGA+TGG | - | chr4_4:50506794-50506813 | None:intergenic | 45.0% |
| TGCAGAAACACCACAAATGG+TGG | - | chr4_4:50506798-50506817 | None:intergenic | 45.0% | |
| TCGTTTGGGTCATCCAAGTT+TGG | + | chr4_4:50506838-50506857 | Msa0686180:intron | 45.0% | |
| TAGTCGTGTGTCGTCTACTT+TGG | + | chr4_4:50507018-50507037 | Msa0686180:intron | 45.0% | |
| AGTCGTGTGTCGTCTACTTT+GGG | + | chr4_4:50507019-50507038 | Msa0686180:intron | 45.0% | |
| CACCTGGATCACCTTATTGA+AGG | + | chr4_4:50507084-50507103 | Msa0686180:intron | 45.0% | |
| AACTCCTTCTTGGCTTCTCA+TGG | + | chr4_4:50507226-50507245 | Msa0686180:intron | 45.0% | |
| ! | TCAGCGACACCATTTTGTTG+CGG | - | chr4_4:50507283-50507302 | None:intergenic | 45.0% |
| GCATCACCCCAAAATCTGAA+AGG | - | chr4_4:50507364-50507383 | None:intergenic | 45.0% | |
| GATAAACCGCATGCCATCAT+CGG | + | chr4_4:50507405-50507424 | Msa0686180:intron | 45.0% | |
| GTAGATCCAAACACACGAAG+AGG | - | chr4_4:50507490-50507509 | None:intergenic | 45.0% | |
| !! | GTAGTGGGTGAAGCAAAGAA+TGG | - | chr4_4:50507676-50507695 | None:intergenic | 45.0% |
| TTTGCTTCACCCACTACATC+TGG | + | chr4_4:50507679-50507698 | Msa0686180:intron | 45.0% | |
| ! | ATCTGATGTTGCTACTTCCC+AGG | + | chr4_4:50507717-50507736 | Msa0686180:intron | 45.0% |
| CAAAATCCTCCACAGTCACA+AGG | + | chr4_4:50507778-50507797 | Msa0686180:intron | 45.0% | |
| TCATCGTTACCTTGTGACTG+TGG | - | chr4_4:50507790-50507809 | None:intergenic | 45.0% | |
| AACGATGAGTTCCGTCGATA+TGG | + | chr4_4:50507802-50507821 | Msa0686180:intron | 45.0% | |
| GCTTCAACATGTCGACGAAT+TGG | - | chr4_4:50507874-50507893 | None:intergenic | 45.0% | |
| CCAAGTAGGAAGGAGACAAT+CGG | - | chr4_4:50508094-50508113 | None:intergenic | 45.0% | |
| AAGCATTATCTCATCCAGGG+TGG | + | chr4_4:50508162-50508181 | Msa0686180:intron | 45.0% | |
| AATGTCAAAGTGGGACCTGA+TGG | + | chr4_4:50508314-50508333 | Msa0686180:intron | 45.0% | |
| AATCGATCAACCTGTCCATC+AGG | - | chr4_4:50508332-50508351 | None:intergenic | 45.0% | |
| ! | TCGATTAAAGGCTCGGTTAG+TGG | + | chr4_4:50508346-50508365 | Msa0686180:intron | 45.0% |
| ACAGATGTCATCTTCGCAAC+TGG | - | chr4_4:50508422-50508441 | None:intergenic | 45.0% | |
| TGGCAGCCATAGCTATAAAG+AGG | - | chr4_4:50508448-50508467 | None:intergenic | 45.0% | |
| TGCTTTCTTGCATGGTGACT+TGG | + | chr4_4:50508505-50508524 | Msa0686180:intron | 45.0% | |
| !! | TCCTGGGTTTGTTGCTCAAA+GGG | + | chr4_4:50508553-50508572 | Msa0686180:intron | 45.0% |
| ! | GGTCCTCTTCGTTACTTTCT+CGG | + | chr4_4:50508845-50508864 | Msa0686180:intron | 45.0% |
| ! | GTCCTCTTCGTTACTTTCTC+GGG | + | chr4_4:50508846-50508865 | Msa0686180:intron | 45.0% |
| ATCCCGAGAAAGTAACGAAG+AGG | - | chr4_4:50508851-50508870 | None:intergenic | 45.0% | |
| TTGGTATTGCTGTCTCTCAG+AGG | + | chr4_4:50508891-50508910 | Msa0686180:intron | 45.0% | |
| !! | GGATCCATAGGAGTATCAAC+TGG | - | chr4_4:50508964-50508983 | None:intergenic | 45.0% |
| AGATATGTCCGATCTGGTCA+AGG | - | chr4_4:50509073-50509092 | None:intergenic | 45.0% | |
| !! | AACAAAAGAGCACCCGGAAA+AGG | + | chr4_4:50509174-50509193 | Msa0686180:intron | 45.0% |
| TTGGGTATTCAGATGCCGAT+TGG | + | chr4_4:50509232-50509251 | Msa0686180:intron | 45.0% | |
| ! | TGGGTATTCAGATGCCGATT+GGG | + | chr4_4:50509233-50509252 | Msa0686180:intron | 45.0% |
| ACTTGCATCTCATGCCCAAT+CGG | - | chr4_4:50509250-50509269 | None:intergenic | 45.0% | |
| AGTGATAGACGGTCTACTTC+TGG | + | chr4_4:50509267-50509286 | Msa0686180:intron | 45.0% | |
| TGGGCGGAAATCTGATTTCA+TGG | + | chr4_4:50509304-50509323 | Msa0686180:intron | 45.0% | |
| !! | AGAAGTCGAGTATCGAGCTA+TGG | + | chr4_4:50509365-50509384 | Msa0686180:intron | 45.0% |
| ! | GAAAAACTGGATTGGAGGAG+AGG | - | chr4_4:50509497-50509516 | None:intergenic | 45.0% |
| ! | CTCGTGAAAAACTGGATTGG+AGG | - | chr4_4:50509502-50509521 | None:intergenic | 45.0% |
| CCTCTCGTGAAAAACTGGAT+TGG | - | chr4_4:50509505-50509524 | None:intergenic | 45.0% | |
| ! | CCAATCCAGTTTTTCACGAG+AGG | + | chr4_4:50509502-50509521 | Msa0686180:intron | 45.0% |
| ATGTATACGCACCACCTTGA+GGG | + | chr4_4:50509691-50509710 | Msa0686180:intron | 45.0% | |
| !!! | TGATATTTTATTTATTATTA+TGG | + | chr4_4:50504536-50504555 | Msa0686180:intron | 5.0% |
| !! | ATATATTATTAAAATTCAAA+TGG | - | chr4_4:50504628-50504647 | None:intergenic | 5.0% |
| !!! | ATTTGAATTTTAATAATATA+TGG | + | chr4_4:50504627-50504646 | Msa0686180:intron | 5.0% |
| !! | GAAAATATAATAAAAATATA+GGG | - | chr4_4:50506280-50506299 | None:intergenic | 5.0% |
| !! | AGAAAATATAATAAAAATAT+AGG | - | chr4_4:50506281-50506300 | None:intergenic | 5.0% |
| !! | TATTCTAATTATTTATTTAA+TGG | + | chr4_4:50510271-50510290 | Msa0686180:intron | 5.0% |
| GTTCTCTCTCTCTCTCTCTC+AGG | + | chr4_4:50503603-50503622 | Msa0686180:intron | 50.0% | |
| TCTCTCTCTCTCTCTCAGGT+AGG | + | chr4_4:50503607-50503626 | Msa0686180:intron | 50.0% | |
| CTCTCTCTCTCTCTCAGGTA+GGG | + | chr4_4:50503608-50503627 | Msa0686180:intron | 50.0% | |
| ! | GGGGAGAGTATGCTGAAATC+AGG | - | chr4_4:50504877-50504896 | None:intergenic | 50.0% |
| ATTTCAGCATACTCTCCCCC+AGG | + | chr4_4:50504878-50504897 | Msa0686180:intron | 50.0% | |
| AGCATTTCGAGCTCAACCTG+GGG | - | chr4_4:50504897-50504916 | None:intergenic | 50.0% | |
| TTTGGAGATGGAAGTGGGAC+TGG | - | chr4_4:50505138-50505157 | None:intergenic | 50.0% | |
| ! | GGGTGTGAAGAAGAGCATAC+TGG | - | chr4_4:50505162-50505181 | None:intergenic | 50.0% |
| ATGCTCTTCTTCACACCCCT+TGG | + | chr4_4:50505164-50505183 | Msa0686180:intron | 50.0% | |
| TGCTCTTCTTCACACCCCTT+GGG | + | chr4_4:50505165-50505184 | Msa0686180:intron | 50.0% | |
| TAAATGGACACGTGGCAGCA+GGG | - | chr4_4:50505210-50505229 | None:intergenic | 50.0% | |
| !! | CAATTTGCTATTCCCGGGAG+CGG | - | chr4_4:50505273-50505292 | None:intergenic | 50.0% |
| CTCCCGGGAATAGCAAATTG+TGG | + | chr4_4:50505273-50505292 | Msa0686180:intron | 50.0% | |
| ! | TTTGGGTTCAGTCGCTGTCA+AGG | + | chr4_4:50506250-50506269 | Msa0686180:intron | 50.0% |
| TGGCTGAAGAGGAAACTGGT+TGG | - | chr4_4:50506376-50506395 | None:intergenic | 50.0% | |
| ATGAGCCAATGTGGCTGAAG+AGG | - | chr4_4:50506387-50506406 | None:intergenic | 50.0% | |
| ! | CCAATACCGATGATGGCATG+CGG | - | chr4_4:50507414-50507433 | None:intergenic | 50.0% |
| CGCATGCCATCATCGGTATT+GGG | + | chr4_4:50507412-50507431 | Msa0686180:intron | 50.0% | |
| ACAGCGTACAGAGGATCCTT+AGG | - | chr4_4:50507466-50507485 | None:intergenic | 50.0% | |
| GCAGACAATTTATCACGGCC+AGG | - | chr4_4:50507535-50507554 | None:intergenic | 50.0% | |
| TAGAGGAATGGGCATCACCT+GGG | - | chr4_4:50507737-50507756 | None:intergenic | 50.0% | |
| ATAGAGGAATGGGCATCACC+TGG | - | chr4_4:50507738-50507757 | None:intergenic | 50.0% | |
| TCGTTACCTTGTGACTGTGG+AGG | - | chr4_4:50507787-50507806 | None:intergenic | 50.0% | |
| CGACGCTCATACCATATCGA+CGG | - | chr4_4:50507816-50507835 | None:intergenic | 50.0% | |
| AGTAGCAGGGTCTTAGGACT+TGG | - | chr4_4:50507928-50507947 | None:intergenic | 50.0% | |
| TCCAGTCTCTTCTCCTGTTG+CGG | + | chr4_4:50507971-50507990 | Msa0686180:intron | 50.0% | |
| AAGTCAATAGGACGCTCTGG+TGG | - | chr4_4:50507999-50508018 | None:intergenic | 50.0% | |
| GGTAAGTCAATAGGACGCTC+TGG | - | chr4_4:50508002-50508021 | None:intergenic | 50.0% | |
| AGTAGGAAGGAGACAATCGG+TGG | - | chr4_4:50508091-50508110 | None:intergenic | 50.0% | |
| CCGATTGTCTCCTTCCTACT+TGG | + | chr4_4:50508091-50508110 | Msa0686180:intron | 50.0% | |
| TGGAAACAAGCCTCTCATCC+AGG | + | chr4_4:50508182-50508201 | Msa0686180:intron | 50.0% | |
| GGAAACAAGCCTCTCATCCA+GGG | + | chr4_4:50508183-50508202 | Msa0686180:intron | 50.0% | |
| TTGTTTCCACCCTGGATGAG+AGG | - | chr4_4:50508171-50508190 | None:intergenic | 50.0% | |
| !! | ATCATGGCTTGTTTCCACCC+TGG | - | chr4_4:50508203-50508222 | None:intergenic | 50.0% |
| ! | AAGGCTCGGTTAGTGGCAAA+AGG | + | chr4_4:50508353-50508372 | Msa0686180:intron | 50.0% |
| CATCTTCGCAACTGGTGAGA+AGG | - | chr4_4:50508414-50508433 | None:intergenic | 50.0% | |
| CTTTGAGCAACAAACCCAGG+AGG | - | chr4_4:50508554-50508573 | None:intergenic | 50.0% | |
| !! | CTCCTGGGTTTGTTGCTCAA+AGG | + | chr4_4:50508552-50508571 | Msa0686180:intron | 50.0% |
| !! | CCTGGGTTTGTTGCTCAAAG+GGG | + | chr4_4:50508554-50508573 | Msa0686180:intron | 50.0% |
| !! | CTGGGTTTGTTGCTCAAAGG+GGG | + | chr4_4:50508555-50508574 | Msa0686180:intron | 50.0% |
| TTTGTTGCTCAAAGGGGGCA+TGG | + | chr4_4:50508560-50508579 | Msa0686180:intron | 50.0% | |
| TGAAACAATCGCCTCGAGCA+TGG | + | chr4_4:50508618-50508637 | Msa0686180:intron | 50.0% | |
| AATCGACCAAACCATGCTCG+AGG | - | chr4_4:50508632-50508651 | None:intergenic | 50.0% | |
| TAATAGGGCTCCCCTTGGTT+AGG | - | chr4_4:50509003-50509022 | None:intergenic | 50.0% | |
| GATCATAATAGGGCTCCCCT+TGG | - | chr4_4:50509008-50509027 | None:intergenic | 50.0% | |
| !! | ACTAGTCTTCGGTATCTGCC+TGG | - | chr4_4:50509030-50509049 | None:intergenic | 50.0% |
| AGGCAGATACCGAAGACTAG+TGG | + | chr4_4:50509029-50509048 | Msa0686180:intron | 50.0% | |
| GGCAGATACCGAAGACTAGT+GGG | + | chr4_4:50509030-50509049 | Msa0686180:intron | 50.0% | |
| !! | CACTGACTTACGACACTGAC+TGG | - | chr4_4:50509099-50509118 | None:intergenic | 50.0% |
| AAAAGCAGACTGTTGTCGCC+CGG | + | chr4_4:50509334-50509353 | Msa0686180:intron | 50.0% | |
| ACTCGACTTCTGTACTCGAC+CGG | - | chr4_4:50509356-50509375 | None:intergenic | 50.0% | |
| CTAAATCTCCACGGAGTCCT+CGG | + | chr4_4:50509630-50509649 | Msa0686180:intron | 50.0% | |
| TAAGTTATCCGAGGACTCCG+TGG | - | chr4_4:50509641-50509660 | None:intergenic | 50.0% | |
| GATGTATACGCACCACCTTG+AGG | + | chr4_4:50509690-50509709 | Msa0686180:intron | 50.0% | |
| TGTATACGCACCACCTTGAG+GGG | + | chr4_4:50509692-50509711 | Msa0686180:intron | 50.0% | |
| TATCTCAACACTCCCCCTCA+AGG | - | chr4_4:50509708-50509727 | None:intergenic | 50.0% | |
| TGATATCCAGTAGACCGTGC+AGG | + | chr4_4:50509955-50509974 | Msa0686180:intron | 50.0% | |
| TGATATCCAGTAGACCGTGC+AGG | + | chr4_4:50509955-50509974 | Msa0686180:intron | 50.0% | |
| GCATTTCGAGCTCAACCTGG+GGG | - | chr4_4:50504896-50504915 | None:intergenic | 55.0% | |
| !! | TCTCAGTGGGGGCATTCTCT+TGG | - | chr4_4:50505095-50505114 | None:intergenic | 55.0% |
| TGCCCCCACTGAGATGAGAA+TGG | + | chr4_4:50505101-50505120 | Msa0686180:intron | 55.0% | |
| AAATGGACACGTGGCAGCAG+GGG | - | chr4_4:50505209-50505228 | None:intergenic | 55.0% | |
| CTAAATGGACACGTGGCAGC+AGG | - | chr4_4:50505211-50505230 | None:intergenic | 55.0% | |
| CCGCATGCCATCATCGGTAT+TGG | + | chr4_4:50507411-50507430 | Msa0686180:intron | 55.0% | |
| GCTGTCCCTCTTCGTGTGTT+TGG | + | chr4_4:50507481-50507500 | Msa0686180:intron | 55.0% | |
| ACCGCAACAGGAGAAGAGAC+TGG | - | chr4_4:50507975-50507994 | None:intergenic | 55.0% | |
| ! | TGAGAGGCTTGTTTCCACCC+TGG | - | chr4_4:50508179-50508198 | None:intergenic | 55.0% |
| AACAAGCCTCTCATCCAGGG+TGG | + | chr4_4:50508186-50508205 | Msa0686180:intron | 55.0% | |
| GTGGAACAAGCTCCCACGTT+TGG | - | chr4_4:50508253-50508272 | None:intergenic | 55.0% | |
| ! | GAGCTTGTTCCACCTCCTCT+TGG | + | chr4_4:50508260-50508279 | Msa0686180:intron | 55.0% |
| ! | CAAAGTGGGACCTGATGGAC+AGG | + | chr4_4:50508319-50508338 | Msa0686180:intron | 55.0% |
| CTATGGCTGCCATGAGACGT+TGG | + | chr4_4:50508456-50508475 | Msa0686180:intron | 55.0% | |
| AAACAGGGGCCAACGTCTCA+TGG | - | chr4_4:50508468-50508487 | None:intergenic | 55.0% | |
| ACGTTGGCCCCTGTTTCAGT+TGG | + | chr4_4:50508472-50508491 | Msa0686180:intron | 55.0% | |
| CCCCTTTGAGCAACAAACCC+AGG | - | chr4_4:50508557-50508576 | None:intergenic | 55.0% | |
| ! | TGCTCAAAGGGGGCATGGTT+TGG | + | chr4_4:50508565-50508584 | Msa0686180:intron | 55.0% |
| CAATCGCCTCGAGCATGGTT+TGG | + | chr4_4:50508623-50508642 | Msa0686180:intron | 55.0% | |
| GGGGAGCCCTATTATGATCC+AGG | + | chr4_4:50509009-50509028 | Msa0686180:intron | 55.0% | |
| CTCGACTTCTGTACTCGACC+GGG | - | chr4_4:50509355-50509374 | None:intergenic | 55.0% | |
| GTATACGCACCACCTTGAGG+GGG | + | chr4_4:50509693-50509712 | Msa0686180:intron | 55.0% | |
| CGAAGAGGGACAGCGTACAG+AGG | - | chr4_4:50507475-50507494 | None:intergenic | 60.0% | |
| CTCAACACTCCCCCTCAAGG+TGG | - | chr4_4:50509705-50509724 | None:intergenic | 60.0% | |
| GATCAGCCTGCACGGTCTAC+TGG | - | chr4_4:50509964-50509983 | None:intergenic | 60.0% | |
| GATCAGCCTGCACGGTCTAC+TGG | - | chr4_4:50509964-50509983 | None:intergenic | 60.0% | |
| CGGCGACAACGCAGAAACGC+AGG | + | chr4_4:50503352-50503371 | Msa0686180:five_prime_UTR | 65.0% | |
| ACGTGGCAGCAGGGGAATGG+AGG | - | chr4_4:50505201-50505220 | None:intergenic | 65.0% | |
| GACACGTGGCAGCAGGGGAA+TGG | - | chr4_4:50505204-50505223 | None:intergenic | 65.0% | |
| TTGTCAAACGCGGCCGCTCC+CGG | + | chr4_4:50505257-50505276 | Msa0686180:intron | 65.0% | |
| CGCTCTGGTGGAACCGCAAC+AGG | - | chr4_4:50507987-50508006 | None:intergenic | 65.0% | |
| TGTCAAACGCGGCCGCTCCC+GGG | + | chr4_4:50505258-50505277 | Msa0686180:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 50503277 | 50510400 | 50503277 | ID=Msa0686180;Name=Msa0686180 |
| chr4_4 | mRNA | 50503277 | 50510400 | 50503277 | ID=Msa0686180-mRNA-1;Parent=Msa0686180;Name=Msa0686180-mRNA-1;_AED=0.19;_eAED=0.19;_QI=106|0.85|1|1|0.85|0.75|8|31|343 |
| chr4_4 | exon | 50503277 | 50503373 | 50503277 | ID=Msa0686180-mRNA-1:exon:12969;Parent=Msa0686180-mRNA-1 |
| chr4_4 | exon | 50503484 | 50503544 | 50503484 | ID=Msa0686180-mRNA-1:exon:12970;Parent=Msa0686180-mRNA-1 |
| chr4_4 | exon | 50503625 | 50503784 | 50503625 | ID=Msa0686180-mRNA-1:exon:12971;Parent=Msa0686180-mRNA-1 |
| chr4_4 | exon | 50503859 | 50503992 | 50503859 | ID=Msa0686180-mRNA-1:exon:12972;Parent=Msa0686180-mRNA-1 |
| chr4_4 | exon | 50504111 | 50504222 | 50504111 | ID=Msa0686180-mRNA-1:exon:12973;Parent=Msa0686180-mRNA-1 |
| chr4_4 | exon | 50504343 | 50504495 | 50504343 | ID=Msa0686180-mRNA-1:exon:12974;Parent=Msa0686180-mRNA-1 |
| chr4_4 | exon | 50505619 | 50505969 | 50505619 | ID=Msa0686180-mRNA-1:exon:12975;Parent=Msa0686180-mRNA-1 |
| chr4_4 | exon | 50510300 | 50510400 | 50510300 | ID=Msa0686180-mRNA-1:exon:12976;Parent=Msa0686180-mRNA-1 |
| chr4_4 | five_prime_UTR | 50503277 | 50503373 | 50503277 | ID=Msa0686180-mRNA-1:five_prime_utr;Parent=Msa0686180-mRNA-1 |
| chr4_4 | five_prime_UTR | 50503484 | 50503492 | 50503484 | ID=Msa0686180-mRNA-1:five_prime_utr;Parent=Msa0686180-mRNA-1 |
| chr4_4 | CDS | 50503493 | 50503544 | 50503493 | ID=Msa0686180-mRNA-1:cds;Parent=Msa0686180-mRNA-1 |
| chr4_4 | CDS | 50503625 | 50503784 | 50503625 | ID=Msa0686180-mRNA-1:cds;Parent=Msa0686180-mRNA-1 |
| chr4_4 | CDS | 50503859 | 50503992 | 50503859 | ID=Msa0686180-mRNA-1:cds;Parent=Msa0686180-mRNA-1 |
| chr4_4 | CDS | 50504111 | 50504222 | 50504111 | ID=Msa0686180-mRNA-1:cds;Parent=Msa0686180-mRNA-1 |
| chr4_4 | CDS | 50504343 | 50504495 | 50504343 | ID=Msa0686180-mRNA-1:cds;Parent=Msa0686180-mRNA-1 |
| chr4_4 | CDS | 50505619 | 50505969 | 50505619 | ID=Msa0686180-mRNA-1:cds;Parent=Msa0686180-mRNA-1 |
| chr4_4 | CDS | 50510300 | 50510369 | 50510300 | ID=Msa0686180-mRNA-1:cds;Parent=Msa0686180-mRNA-1 |
| chr4_4 | three_prime_UTR | 50510370 | 50510400 | 50510370 | ID=Msa0686180-mRNA-1:three_prime_utr;Parent=Msa0686180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
