Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1460800 | XP_003592328.1 | 99.038 | 104 | 1 | 0 | 1 | 104 | 1 | 104 | 5.84e-70 | 214 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1460800 | G7IC10 | 99.038 | 104 | 1 | 0 | 1 | 104 | 1 | 104 | 2.79e-70 | 214 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001380 | Msa1460800 | 0.803404 | 3.542649e-49 | -8.615850e-47 |
| Msa0015480 | Msa1460800 | 0.801919 | 7.172726e-49 | -8.615850e-47 |
| Msa0018070 | Msa1460800 | 0.810546 | 1.092292e-50 | -8.615850e-47 |
| Msa0037570 | Msa1460800 | -0.801032 | 1.090260e-48 | -8.615850e-47 |
| Msa0051210 | Msa1460800 | 0.819622 | 1.054149e-52 | -8.615850e-47 |
| Msa0051450 | Msa1460800 | 0.823172 | 1.598163e-53 | -8.615850e-47 |
| Msa0054260 | Msa1460800 | 0.806568 | 7.721455e-50 | -8.615850e-47 |
| Msa0064300 | Msa1460800 | 0.822400 | 2.417553e-53 | -8.615850e-47 |
| Msa0085290 | Msa1460800 | 0.807724 | 4.394566e-50 | -8.615850e-47 |
| Msa0092410 | Msa1460800 | 0.813411 | 2.594498e-51 | -8.615850e-47 |
| Msa0100090 | Msa1460800 | 0.818075 | 2.368340e-52 | -8.615850e-47 |
| Msa0101830 | Msa1460800 | 0.831757 | 1.393111e-55 | -8.615850e-47 |
| Msa0109590 | Msa1460800 | 0.826946 | 2.051662e-54 | -8.615850e-47 |
| Msa1348600 | Msa1460800 | 0.807788 | 4.260181e-50 | -8.615850e-47 |
| Msa1353890 | Msa1460800 | 0.803123 | 4.050132e-49 | -8.615850e-47 |
| Msa1355890 | Msa1460800 | 0.859717 | 3.410498e-63 | -8.615850e-47 |
| Msa1365270 | Msa1460800 | 0.802842 | 4.630275e-49 | -8.615850e-47 |
| Msa1376450 | Msa1460800 | 0.813795 | 2.135659e-51 | -8.615850e-47 |
| Msa1377080 | Msa1460800 | 0.824064 | 9.881362e-54 | -8.615850e-47 |
| Msa1378040 | Msa1460800 | 0.825657 | 4.159453e-54 | -8.615850e-47 |
| Msa1380220 | Msa1460800 | 0.812051 | 5.148540e-51 | -8.615850e-47 |
| Msa1394310 | Msa1460800 | 0.805237 | 1.470935e-49 | -8.615850e-47 |
| Msa1408340 | Msa1460800 | 0.822298 | 2.553229e-53 | -8.615850e-47 |
| Msa1419960 | Msa1460800 | 0.821010 | 5.068803e-53 | -8.615850e-47 |
| Msa1420270 | Msa1460800 | 0.819429 | 1.167087e-52 | -8.615850e-47 |
| Msa1424630 | Msa1460800 | 0.802921 | 4.460121e-49 | -8.615850e-47 |
| Msa1427230 | Msa1460800 | 0.811796 | 5.853243e-51 | -8.615850e-47 |
| Msa1430130 | Msa1460800 | 0.810044 | 1.401808e-50 | -8.615850e-47 |
| Msa1430550 | Msa1460800 | 0.800367 | 1.490167e-48 | -8.615850e-47 |
| Msa1457160 | Msa1460800 | 0.806919 | 6.510836e-50 | -8.615850e-47 |
| Msa1458510 | Msa1460800 | 0.805834 | 1.102303e-49 | -8.615850e-47 |
| Msa1460750 | Msa1460800 | 0.809994 | 1.436868e-50 | -8.615850e-47 |
| Msa1460800 | Msa1460830 | 0.807891 | 4.050879e-50 | -8.615850e-47 |
| Msa1460800 | Msa1462360 | 0.810248 | 1.266859e-50 | -8.615850e-47 |
| Msa0603370 | Msa1460800 | 0.809046 | 2.296438e-50 | -8.615850e-47 |
| Msa0615010 | Msa1460800 | 0.838004 | 3.720422e-57 | -8.615850e-47 |
| Msa0615220 | Msa1460800 | 0.803294 | 3.733822e-49 | -8.615850e-47 |
| Msa0620960 | Msa1460800 | 0.807489 | 4.931322e-50 | -8.615850e-47 |
| Msa0644400 | Msa1460800 | 0.803366 | 3.607153e-49 | -8.615850e-47 |
| Msa0648860 | Msa1460800 | 0.817339 | 3.470615e-52 | -8.615850e-47 |
| Msa0667740 | Msa1460800 | 0.830169 | 3.416913e-55 | -8.615850e-47 |
| Msa0689780 | Msa1460800 | 0.808839 | 2.542927e-50 | -8.615850e-47 |
| Msa0701010 | Msa1460800 | 0.800014 | 1.758154e-48 | -8.615850e-47 |
| Msa0708310 | Msa1460800 | 0.811671 | 6.229441e-51 | -8.615850e-47 |
| Msa0711150 | Msa1460800 | 0.847193 | 1.349692e-59 | -8.615850e-47 |
| Msa0715410 | Msa1460800 | 0.823644 | 1.239335e-53 | -8.615850e-47 |
| Msa0731180 | Msa1460800 | 0.819927 | 8.980337e-53 | -8.615850e-47 |
| Msa0741400 | Msa1460800 | 0.800441 | 1.439388e-48 | -8.615850e-47 |
| Msa0742150 | Msa1460800 | 0.807499 | 4.906269e-50 | -8.615850e-47 |
| Msa0760410 | Msa1460800 | 0.800887 | 1.167074e-48 | -8.615850e-47 |
| Msa0760440 | Msa1460800 | 0.806489 | 8.024999e-50 | -8.615850e-47 |
| Msa0771580 | Msa1460800 | 0.814157 | 1.777775e-51 | -8.615850e-47 |
| Msa0786780 | Msa1460800 | 0.802283 | 6.036615e-49 | -8.615850e-47 |
| Msa0801780 | Msa1460800 | 0.823845 | 1.112226e-53 | -8.615850e-47 |
| Msa0820850 | Msa1460800 | 0.802293 | 6.008564e-49 | -8.615850e-47 |
| Msa0825870 | Msa1460800 | 0.816704 | 4.821492e-52 | -8.615850e-47 |
| Msa0830230 | Msa1460800 | 0.821346 | 4.239672e-53 | -8.615850e-47 |
| Msa0831850 | Msa1460800 | 0.814943 | 1.190587e-51 | -8.615850e-47 |
| Msa0135410 | Msa1460800 | 0.815711 | 8.035330e-52 | -8.615850e-47 |
| Msa0138020 | Msa1460800 | 0.810115 | 1.353510e-50 | -8.615850e-47 |
| Msa0143930 | Msa1460800 | 0.800382 | 1.479561e-48 | -8.615850e-47 |
| Msa0164910 | Msa1460800 | 0.802123 | 6.513764e-49 | -8.615850e-47 |
| Msa0187830 | Msa1460800 | 0.811117 | 8.217127e-51 | -8.615850e-47 |
| Msa0194440 | Msa1460800 | 0.801852 | 7.404903e-49 | -8.615850e-47 |
| Msa0197660 | Msa1460800 | 0.817376 | 3.405175e-52 | -8.615850e-47 |
| Msa0200850 | Msa1460800 | 0.817609 | 3.017367e-52 | -8.615850e-47 |
| Msa0201530 | Msa1460800 | 0.822958 | 1.793056e-53 | -8.615850e-47 |
| Msa0201570 | Msa1460800 | 0.806701 | 7.239229e-50 | -8.615850e-47 |
| Msa0206010 | Msa1460800 | 0.800906 | 1.156667e-48 | -8.615850e-47 |
| Msa0217480 | Msa1460800 | 0.813279 | 2.773371e-51 | -8.615850e-47 |
| Msa0217700 | Msa1460800 | 0.809744 | 1.626270e-50 | -8.615850e-47 |
| Msa1225100 | Msa1460800 | 0.800355 | 1.498377e-48 | -8.615850e-47 |
| Msa1231840 | Msa1460800 | 0.800642 | 1.309480e-48 | -8.615850e-47 |
| Msa1246700 | Msa1460800 | 0.822483 | 2.312830e-53 | -8.615850e-47 |
| Msa1270660 | Msa1460800 | 0.802430 | 5.631760e-49 | -8.615850e-47 |
| Msa1270730 | Msa1460800 | 0.805979 | 1.027780e-49 | -8.615850e-47 |
| Msa1276340 | Msa1460800 | 0.841530 | 4.494259e-58 | -8.615850e-47 |
| Msa1279480 | Msa1460800 | 0.825570 | 4.362122e-54 | -8.615850e-47 |
| Msa1280150 | Msa1460800 | 0.811499 | 6.791278e-51 | -8.615850e-47 |
| Msa1305200 | Msa1460800 | 0.804985 | 1.660791e-49 | -8.615850e-47 |
| Msa1305350 | Msa1460800 | 0.806273 | 8.910219e-50 | -8.615850e-47 |
| Msa1312520 | Msa1460800 | 0.815210 | 1.038921e-51 | -8.615850e-47 |
| Msa1335230 | Msa1460800 | 0.805287 | 1.435938e-49 | -8.615850e-47 |
| Msa1338400 | Msa1460800 | 0.818687 | 1.721250e-52 | -8.615850e-47 |
| Msa0369920 | Msa1460800 | 0.802006 | 6.885925e-49 | -8.615850e-47 |
| Msa0371950 | Msa1460800 | 0.844639 | 6.675892e-59 | -8.615850e-47 |
| Msa0410580 | Msa1460800 | 0.808034 | 3.775661e-50 | -8.615850e-47 |
| Msa0416760 | Msa1460800 | 0.815615 | 8.443555e-52 | -8.615850e-47 |
| Msa0417330 | Msa1460800 | 0.829693 | 4.463542e-55 | -8.615850e-47 |
| Msa0433410 | Msa1460800 | -0.816887 | 4.386432e-52 | -8.615850e-47 |
| Msa0434180 | Msa1460800 | 0.815935 | 7.163579e-52 | -8.615850e-47 |
| Msa0438040 | Msa1460800 | 0.818635 | 1.768700e-52 | -8.615850e-47 |
| Msa0455760 | Msa1460800 | 0.825683 | 4.101847e-54 | -8.615850e-47 |
| Msa0477260 | Msa1460800 | 0.810018 | 1.419857e-50 | -8.615850e-47 |
| Msa0479340 | Msa1460800 | 0.815953 | 7.096462e-52 | -8.615850e-47 |
| Msa0994370 | Msa1460800 | 0.802227 | 6.200937e-49 | -8.615850e-47 |
| Msa0999220 | Msa1460800 | 0.802306 | 5.973221e-49 | -8.615850e-47 |
| Msa1007230 | Msa1460800 | 0.801048 | 1.082024e-48 | -8.615850e-47 |
| Msa1023300 | Msa1460800 | 0.801514 | 8.685073e-49 | -8.615850e-47 |
| Msa1026940 | Msa1460800 | 0.811701 | 6.136472e-51 | -8.615850e-47 |
| Msa1052330 | Msa1460800 | 0.811365 | 7.261409e-51 | -8.615850e-47 |
| Msa1087990 | Msa1460800 | 0.825106 | 5.617335e-54 | -8.615850e-47 |
| Msa1094280 | Msa1460800 | 0.800789 | 1.222050e-48 | -8.615850e-47 |
| Msa1100930 | Msa1460800 | 0.812072 | 5.095621e-51 | -8.615850e-47 |
| Msa1107190 | Msa1460800 | 0.838456 | 2.845823e-57 | -8.615850e-47 |
| Msa0239800 | Msa1460800 | 0.815065 | 1.118594e-51 | -8.615850e-47 |
| Msa0244140 | Msa1460800 | 0.818727 | 1.685123e-52 | -8.615850e-47 |
| Msa0244190 | Msa1460800 | 0.834828 | 2.391756e-56 | -8.615850e-47 |
| Msa0257500 | Msa1460800 | 0.807559 | 4.763886e-50 | -8.615850e-47 |
| Msa0269560 | Msa1460800 | 0.812595 | 3.917409e-51 | -8.615850e-47 |
| Msa0269810 | Msa1460800 | 0.807771 | 4.295606e-50 | -8.615850e-47 |
| Msa0271550 | Msa1460800 | 0.813868 | 2.058172e-51 | -8.615850e-47 |
| Msa0277820 | Msa1460800 | 0.803553 | 3.300550e-49 | -8.615850e-47 |
| Msa0281930 | Msa1460800 | 0.819497 | 1.126242e-52 | -8.615850e-47 |
| Msa0299660 | Msa1460800 | 0.800424 | 1.450778e-48 | -8.615850e-47 |
| Msa0317510 | Msa1460800 | 0.811770 | 5.929783e-51 | -8.615850e-47 |
| Msa0319290 | Msa1460800 | 0.813996 | 1.928483e-51 | -8.615850e-47 |
| Msa0321080 | Msa1460800 | 0.824654 | 7.178163e-54 | -8.615850e-47 |
| Msa0333650 | Msa1460800 | 0.801008 | 1.102705e-48 | -8.615850e-47 |
| Msa0339620 | Msa1460800 | 0.808859 | 2.517596e-50 | -8.615850e-47 |
| Msa0340690 | Msa1460800 | 0.805759 | 1.142973e-49 | -8.615850e-47 |
| Msa0340710 | Msa1460800 | 0.810266 | 1.255720e-50 | -8.615850e-47 |
| Msa0347750 | Msa1460800 | 0.816632 | 5.004231e-52 | -8.615850e-47 |
| Msa0357760 | Msa1460800 | 0.820659 | 6.104200e-53 | -8.615850e-47 |
| Msa0357790 | Msa1460800 | 0.823802 | 1.138503e-53 | -8.615850e-47 |
| Msa0357830 | Msa1460800 | 0.841320 | 5.103635e-58 | -8.615850e-47 |
| Msa0357840 | Msa1460800 | 0.838033 | 3.656344e-57 | -8.615850e-47 |
| Msa0357870 | Msa1460800 | 0.817932 | 2.550741e-52 | -8.615850e-47 |
| Msa1111870 | Msa1460800 | 0.800863 | 1.180527e-48 | -8.615850e-47 |
| Msa1115280 | Msa1460800 | 0.813997 | 1.928232e-51 | -8.615850e-47 |
| Msa1150790 | Msa1460800 | 0.802752 | 4.833700e-49 | -8.615850e-47 |
| Msa1150810 | Msa1460800 | 0.817141 | 3.846647e-52 | -8.615850e-47 |
| Msa1180500 | Msa1460800 | 0.810909 | 9.116346e-51 | -8.615850e-47 |
| Msa1181330 | Msa1460800 | 0.803024 | 4.246726e-49 | -8.615850e-47 |
| Msa1181800 | Msa1460800 | 0.800099 | 1.689379e-48 | -8.615850e-47 |
| Msa1200250 | Msa1460800 | 0.836779 | 7.660682e-57 | -8.615850e-47 |
| Msa1210110 | Msa1460800 | 0.800613 | 1.327690e-48 | -8.615850e-47 |
| Msa1221330 | Msa1460800 | 0.807108 | 5.936305e-50 | -8.615850e-47 |
| Msa0485490 | Msa1460800 | 0.817857 | 2.653250e-52 | -8.615850e-47 |
| Msa0574600 | Msa1460800 | 0.804059 | 2.591030e-49 | -8.615850e-47 |
| Msa0842650 | Msa1460800 | 0.821595 | 3.713344e-53 | -8.615850e-47 |
| Msa0844110 | Msa1460800 | 0.803302 | 3.720259e-49 | -8.615850e-47 |
| Msa0860400 | Msa1460800 | 0.804731 | 1.876658e-49 | -8.615850e-47 |
| Msa0861130 | Msa1460800 | 0.810541 | 1.095197e-50 | -8.615850e-47 |
| Msa0870060 | Msa1460800 | 0.828764 | 7.498868e-55 | -8.615850e-47 |
| Msa0876360 | Msa1460800 | 0.812090 | 5.049815e-51 | -8.615850e-47 |
| Msa0888260 | Msa1460800 | 0.832394 | 9.692763e-56 | -8.615850e-47 |
| Msa0894710 | Msa1460800 | 0.809757 | 1.615791e-50 | -8.615850e-47 |
| Msa0921420 | Msa1460800 | 0.800440 | 1.440093e-48 | -8.615850e-47 |
| Msa0927380 | Msa1460800 | 0.826955 | 2.041462e-54 | -8.615850e-47 |
| Msa0932100 | Msa1460800 | 0.828079 | 1.097083e-54 | -8.615850e-47 |
| Msa0932190 | Msa1460800 | 0.835264 | 1.857127e-56 | -8.615850e-47 |
| Msa0935770 | Msa1460800 | 0.808054 | 3.738725e-50 | -8.615850e-47 |
| Msa0936060 | Msa1460800 | 0.807729 | 4.383380e-50 | -8.615850e-47 |
| Msa0960390 | Msa1460800 | 0.818580 | 1.820212e-52 | -8.615850e-47 |
| Msa0960740 | Msa1460800 | 0.801806 | 7.566638e-49 | -8.615850e-47 |
| Msa0964900 | Msa1460800 | 0.810686 | 1.018754e-50 | -8.615850e-47 |
| Msa0970230 | Msa1460800 | 0.829371 | 5.345408e-55 | -8.615850e-47 |
| Msa0972960 | Msa1460800 | 0.802506 | 5.433189e-49 | -8.615850e-47 |
| Msa0978700 | Msa1460800 | 0.810516 | 1.108882e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1460800 | MtrunA17_Chr1g0203891 | 99.038 | 104 | 1 | 0 | 1 | 104 | 1 | 104 | 5.37e-74 | 214 |
| Msa1460800 | MtrunA17_Chr8g0355101 | 61.458 | 96 | 31 | 2 | 6 | 96 | 18 | 112 | 1.10e-37 | 122 |
| Msa1460800 | MtrunA17_Chr8g0350841 | 60.417 | 96 | 32 | 2 | 6 | 96 | 18 | 112 | 1.14e-35 | 117 |
| Msa1460800 | MtrunA17_Chr7g0266071 | 63.333 | 90 | 31 | 1 | 10 | 97 | 15 | 104 | 2.54e-32 | 108 |
| Msa1460800 | MtrunA17_Chr1g0178891 | 51.923 | 104 | 36 | 3 | 2 | 92 | 7 | 109 | 4.41e-31 | 106 |
| Msa1460800 | MtrunA17_Chr8g0350871 | 63.043 | 92 | 29 | 1 | 6 | 92 | 18 | 109 | 8.04e-31 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1460800 | AT4G25433.1 | 52.525 | 99 | 36 | 3 | 4 | 92 | 7 | 104 | 8.69e-30 | 103 |
| Msa1460800 | AT5G62150.1 | 58.947 | 95 | 37 | 2 | 7 | 101 | 10 | 102 | 9.65e-29 | 100 |
| Msa1460800 | AT3G52790.1 | 51.485 | 101 | 37 | 3 | 6 | 96 | 10 | 108 | 3.36e-28 | 99.0 |
Find 25 sgRNAs with CRISPR-Local
Find 26 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTATTGGGCATGATATTAT+TGG | 0.221140 | tig0041091:+9304 | Msa1460800:CDS |
| GTATTGTGCAATAGCGTTAT+TGG | 0.257022 | tig0041091:+9289 | Msa1460800:CDS |
| CTTCAACAATTTCCTAGTAT+TGG | 0.339584 | tig0041091:-9543 | Msa1460800:intergenic |
| TTATTGGGCATGATATTATT+GGG | 0.350044 | tig0041091:+9305 | Msa1460800:CDS |
| GGATTCCTCTCTACAATAAA+CGG | 0.377759 | tig0041091:-9461 | Msa1460800:intergenic |
| TATTGTGCAATAGCGTTATT+GGG | 0.380688 | tig0041091:+9290 | Msa1460800:CDS |
| GTGGCTGAATTACAAGTTAG+AGG | 0.410773 | tig0041091:+9347 | Msa1460800:CDS |
| AGACCAGGGAAAACATCATC+TGG | 0.456913 | tig0041091:-9497 | Msa1460800:intergenic |
| TCATCACACCGACCAATACT+AGG | 0.469317 | tig0041091:+9531 | Msa1460800:CDS |
| GGAAAACATCATCTGGATCA+TGG | 0.481353 | tig0041091:-9490 | Msa1460800:intergenic |
| GATTCCTCTCTACAATAAAC+GGG | 0.500635 | tig0041091:-9460 | Msa1460800:intergenic |
| CAAGTTAGAGGGAATAGTCT+TGG | 0.505805 | tig0041091:+9359 | Msa1460800:CDS |
| AACAATTTCCTAGTATTGGT+CGG | 0.516529 | tig0041091:-9539 | Msa1460800:intergenic |
| TCATCTGGATCATGGATATG+TGG | 0.554352 | tig0041091:-9482 | Msa1460800:intergenic |
| GAGATATATGTTGTGGGAGA+AGG | 0.558851 | tig0041091:+9401 | Msa1460800:CDS |
| CACAACATGGGTTCCTCTAG+AGG | 0.559347 | tig0041091:+9251 | None:intergenic |
| CTAGAGGTGATTCAGCATCA+TGG | 0.560521 | tig0041091:+9267 | Msa1460800:CDS |
| ATGATTCTGATAACAAGACC+AGG | 0.590651 | tig0041091:-9512 | Msa1460800:intergenic |
| TGGCTGAATTACAAGTTAGA+GGG | 0.596295 | tig0041091:+9348 | Msa1460800:CDS |
| TGTGATGAGATATATGTTGT+GGG | 0.600497 | tig0041091:+9395 | Msa1460800:CDS |
| TGATGCTGAATCACCTCTAG+AGG | 0.613640 | tig0041091:-9264 | Msa1460800:intergenic |
| GTGACCCGTTTATTGTAGAG+AGG | 0.616188 | tig0041091:+9456 | Msa1460800:CDS |
| ATGTGATGAGATATATGTTG+TGG | 0.646471 | tig0041091:+9394 | Msa1460800:CDS |
| ATCAATAAGAGAAAGTACTG+TGG | 0.691350 | tig0041091:+9328 | Msa1460800:CDS |
| TGATTCTGATAACAAGACCA+GGG | 0.737080 | tig0041091:-9511 | Msa1460790:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TTATTGGGCATGATATTATT+GGG | + | tig0041091:9305-9324 | Msa1460800:CDS | 25.0% |
| TATTGTGCAATAGCGTTATT+GGG | + | tig0041091:9290-9309 | Msa1460800:CDS | 30.0% | |
| GTTATTGGGCATGATATTAT+TGG | + | tig0041091:9304-9323 | Msa1460800:CDS | 30.0% | |
| !! | ATCAATAAGAGAAAGTACTG+TGG | + | tig0041091:9328-9347 | Msa1460800:CDS | 30.0% |
| ATGTGATGAGATATATGTTG+TGG | + | tig0041091:9394-9413 | Msa1460800:CDS | 30.0% | |
| TGTGATGAGATATATGTTGT+GGG | + | tig0041091:9395-9414 | Msa1460800:CDS | 30.0% | |
| AACACAATCAGTGAAAAATG+TGG | + | tig0041091:9434-9453 | Msa1460800:CDS | 30.0% | |
| !! | AACAATTTCCTAGTATTGGT+CGG | - | tig0041091:9542-9561 | Msa1460800:intergenic | 30.0% |
| CTTCAACAATTTCCTAGTAT+TGG | - | tig0041091:9546-9565 | Msa1460800:intergenic | 30.0% | |
| GTATTGTGCAATAGCGTTAT+TGG | + | tig0041091:9289-9308 | Msa1460800:CDS | 35.0% | |
| TGGCTGAATTACAAGTTAGA+GGG | + | tig0041091:9348-9367 | Msa1460800:CDS | 35.0% | |
| GATTCCTCTCTACAATAAAC+GGG | - | tig0041091:9463-9482 | Msa1460800:intergenic | 35.0% | |
| GGATTCCTCTCTACAATAAA+CGG | - | tig0041091:9464-9483 | Msa1460800:intergenic | 35.0% | |
| TGATTCTGATAACAAGACCA+GGG | - | tig0041091:9514-9533 | Msa1460800:intergenic | 35.0% | |
| ATGATTCTGATAACAAGACC+AGG | - | tig0041091:9515-9534 | Msa1460800:intergenic | 35.0% | |
| GTGGCTGAATTACAAGTTAG+AGG | + | tig0041091:9347-9366 | Msa1460800:CDS | 40.0% | |
| CAAGTTAGAGGGAATAGTCT+TGG | + | tig0041091:9359-9378 | Msa1460800:CDS | 40.0% | |
| GAGATATATGTTGTGGGAGA+AGG | + | tig0041091:9401-9420 | Msa1460800:CDS | 40.0% | |
| TCATCTGGATCATGGATATG+TGG | - | tig0041091:9485-9504 | Msa1460800:intergenic | 40.0% | |
| GGAAAACATCATCTGGATCA+TGG | - | tig0041091:9493-9512 | Msa1460800:intergenic | 40.0% | |
| TGATGCTGAATCACCTCTAG+AGG | - | tig0041091:9267-9286 | Msa0410760:intergenic | 45.0% | |
| CTAGAGGTGATTCAGCATCA+TGG | + | tig0041091:9267-9286 | Msa1460800:CDS | 45.0% | |
| GTGACCCGTTTATTGTAGAG+AGG | + | tig0041091:9456-9475 | Msa1460800:CDS | 45.0% | |
| ! | GATCCAGATGATGTTTTCCC+TGG | + | tig0041091:9494-9513 | Msa1460800:CDS | 45.0% |
| AGACCAGGGAAAACATCATC+TGG | - | tig0041091:9500-9519 | Msa1460800:intergenic | 45.0% | |
| TCATCACACCGACCAATACT+AGG | + | tig0041091:9531-9550 | Msa1460800:CDS | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0041091 | gene | 9257 | 9571 | 9257 | ID=Msa1460800;Name=Msa1460800 |
| tig0041091 | mRNA | 9257 | 9571 | 9257 | ID=Msa1460800-mRNA-1;Parent=Msa1460800;Name=Msa1460800-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|104 |
| tig0041091 | exon | 9257 | 9571 | 9257 | ID=Msa1460800-mRNA-1:exon:22896;Parent=Msa1460800-mRNA-1 |
| tig0041091 | CDS | 9257 | 9571 | 9257 | ID=Msa1460800-mRNA-1:cds;Parent=Msa1460800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
