AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1395690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1395690 MtrunA17_Chr1g0199111 70.085 234 14 4 1 216 34 229 5.31e-57 184
Msa1395690 MtrunA17_Chr1g0199111 65.909 132 7 6 157 255 74 200 2.63e-22 94.0
Msa1395690 MtrunA17_Chr1g0199111 75.309 81 9 3 29 106 174 246 9.74e-15 72.8
Msa1395690 MtrunA17_Chr1g0199111 68.421 95 16 4 42 125 171 262 4.47e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 145 sgRNAs with CRISPR-Local

Find 424 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGAGTGGTAGACTGGTTT+AGG 0.210173 tig0021959:+29767 None:intergenic
GACTTCTTTGGTGGTGGTGG+TGG 0.218370 tig0021959:+30025 None:intergenic
GGGTGAGGGTAGGTGTGAAC+TGG 0.222781 tig0021959:+29692 None:intergenic
GGAGAGTGGTAGACCGGTTT+TGG 0.227125 tig0021959:+29671 None:intergenic
GGAGAGTGGTATACTGGTTT+AGG 0.234531 tig0021959:+30151 None:intergenic
AAGGGACAGATTACTATAAT+AGG 0.237845 tig0021959:+29031 None:intergenic
TTAGGGTAGGTGTGATGAAC+TGG 0.250652 tig0021959:+29836 None:intergenic
GGAGAATGGTAAACTGGTTT+AGG 0.264396 tig0021959:+30202 None:intergenic
GGAGAGTGGTAAACTGGTTT+AGG 0.264396 tig0021959:+30247 None:intergenic
GGGTGAGGGTAGGTGTGAAC+TGG 0.274431 tig0021959:+29788 None:intergenic
GGAGAGTGGTAGACTGGTTT+AGG 0.276912 tig0021959:+29818 None:intergenic
GGAGAGTGGTAGACTGGTTT+AGG 0.276912 tig0021959:+29866 None:intergenic
TTGTGTGGTGTTGGTGGTGG+TGG 0.296778 tig0021959:+29935 None:intergenic
CTTCTTTGGTGGTGGTGGTG+GGG 0.304850 tig0021959:+30027 None:intergenic
GTGAGGGTACTTGTGGAATG+GGG 0.310159 tig0021959:+29979 None:intergenic
AACTGCAGACAAATGCATAT+TGG 0.313140 tig0021959:+29127 None:intergenic
GGAGGAGGAGAATGGTAAAC+TGG 0.315939 tig0021959:+29608 None:intergenic
GGGTAGGTGTGAACTGGTGG+TGG 0.323054 tig0021959:+29647 None:intergenic
GGTTTAGGGTAGGTGTGAAC+TGG 0.323634 tig0021959:+29881 None:intergenic
ACTGCAGACAAATGCATATT+GGG 0.325953 tig0021959:+29128 None:intergenic
GGTGGTGGGGAATGGTAGAC+AGG 0.327301 tig0021959:+29950 None:intergenic
GGTGGTGGAGAGTGGTAAAC+TGG 0.331089 tig0021959:+30241 None:intergenic
TGAGGGTAGGTGTGAACTGG+GGG 0.338637 tig0021959:+29695 None:intergenic
TGAGGGTAGGTGTGAACTGG+GGG 0.338637 tig0021959:+29791 None:intergenic
GGGTATTTGTAGGACTTCTT+TGG 0.339824 tig0021959:+30013 None:intergenic
AACTGGGTGGGGAACGTGTG+GGG 0.342140 tig0021959:+29625 None:intergenic
GGGGAATGGACTGGAGGAGG+AGG 0.342363 tig0021959:+29593 None:intergenic
TGTGTGGTGTTGGTGGTGGT+GGG 0.350492 tig0021959:+29936 None:intergenic
GGTGAGGGTACTTGTGGAAT+GGG 0.364132 tig0021959:+29978 None:intergenic
TAGGTGTGAACTGGTGGTGG+TGG 0.365546 tig0021959:+29650 None:intergenic
GGTGGTGGAGAATGGTAGAC+TGG 0.368383 tig0021959:+30094 None:intergenic
GTGTTGGTGGTGGTGGGGAA+TGG 0.368418 tig0021959:+29942 None:intergenic
ACTTCTTTGGTGGTGGTGGT+GGG 0.372019 tig0021959:+30026 None:intergenic
AGGGACAGATTACTATAATA+GGG 0.382818 tig0021959:+29032 None:intergenic
TGGTGGTGGTGGAGAGGAAT+AGG 0.383114 tig0021959:+30309 None:intergenic
TGAGGGTACTTGTGGAATGG+GGG 0.384288 tig0021959:+29980 None:intergenic
GTGAGGGTAGGTGTGAACTG+GGG 0.384890 tig0021959:+29790 None:intergenic
TAGGGTAGGTGTGATGAACT+GGG 0.385655 tig0021959:+29837 None:intergenic
CCCTTGATCTTCTTTGTGCA+TGG 0.385831 tig0021959:+29261 None:intergenic
GAGAATGGTAAACTGGTTTA+GGG 0.386114 tig0021959:+30203 None:intergenic
GGTGGTGGAGAATGGTAAAC+TGG 0.388855 tig0021959:+30196 None:intergenic
GGTTTAGGGTAGGTGTGAAC+TGG 0.391381 tig0021959:+30217 None:intergenic
GGGGAATGGTAGACAGGGTG+AGG 0.393051 tig0021959:+29956 None:intergenic
TTAGGGTAGGTGTGAACTGG+GGG 0.394496 tig0021959:+29884 None:intergenic
TTAGGGTAGGTGTGAACTGG+GGG 0.394496 tig0021959:+30220 None:intergenic
GGTGAGGGTAGGTGTGAACT+GGG 0.397880 tig0021959:+29693 None:intergenic
TGGTAGACAGGGTGAGGGTG+AGG 0.399555 tig0021959:+29962 None:intergenic
GGTGGAGGAGAGTGGTAGAT+TGG 0.401120 tig0021959:+29716 None:intergenic
GTGAGGGTAGGTGTGAACTG+GGG 0.401198 tig0021959:+29694 None:intergenic
GGTGAGGGTAGGTGTGAACT+GGG 0.401214 tig0021959:+29789 None:intergenic
GGTGGAGGAGAGTGGTAGAC+TGG 0.406838 tig0021959:+29812 None:intergenic
GGTGGAGGAGAGTGGTAGAC+TGG 0.406838 tig0021959:+29860 None:intergenic
GGTGGTGGAGAGTGGTAGAC+TGG 0.406884 tig0021959:+29761 None:intergenic
GGAGAGTGGTAGATTGGCTT+AGG 0.407710 tig0021959:+29722 None:intergenic
GAGAGTGGTAGACTGGTTTA+GGG 0.407775 tig0021959:+29819 None:intergenic
GAGAGTGGTAGACTGGTTTA+GGG 0.407775 tig0021959:+29867 None:intergenic
TAGGACTTCTTTGGTGGTGG+TGG 0.413096 tig0021959:+30022 None:intergenic
GAGAGTGGTATACTGGTTTA+GGG 0.413906 tig0021959:+30152 None:intergenic
ACTGGGTGGGGAACGTGTGG+GGG 0.414643 tig0021959:+29626 None:intergenic
GAGAGTGGTAGACTGGTTTA+GGG 0.414873 tig0021959:+29768 None:intergenic
GTGTGAACTGGAGGAGGTGG+AGG 0.417630 tig0021959:+30274 None:intergenic
GAGAGTGGTAAACTGGTTTA+GGG 0.421341 tig0021959:+30248 None:intergenic
TTCTTGTGTGGTGTTGGTGG+TGG 0.422729 tig0021959:+29932 None:intergenic
GGTGGGGAATGGACTGGAGG+AGG 0.423530 tig0021959:+29590 None:intergenic
TAAACTGGGTGGGGAACGTG+TGG 0.424331 tig0021959:+29623 None:intergenic
TAGGTGTGAACTGGAGGAGG+TGG 0.427966 tig0021959:+30271 None:intergenic
TATGGCTTCTTGTGTGGTGT+TGG 0.430459 tig0021959:+29926 None:intergenic
TGGTAGACTGGGTGTGGATG+AGG 0.432940 tig0021959:+30106 None:intergenic
GGCTTCTTGTGTGGTGTTGG+TGG 0.438133 tig0021959:+29929 None:intergenic
GTTTAGGGTAGGTGTGAACT+GGG 0.438204 tig0021959:+29882 None:intergenic
GTTTAGGGTAGGTGTGAACT+GGG 0.438204 tig0021959:+30218 None:intergenic
GGGTGAGGGTACTTGTGAAC+TGG 0.439845 tig0021959:+30172 None:intergenic
ATTTGATTAAGATTGTTTAG+AGG 0.441210 tig0021959:-29213 Msa1395690:exon
GGATGAGGGTACTTGTGAAC+TGG 0.454340 tig0021959:+30070 None:intergenic
GGGTGAGGGTACTTGTGGAA+TGG 0.457239 tig0021959:+29977 None:intergenic
TTTCATTATCCACAGCTGTA+AGG 0.463114 tig0021959:-29157 Msa1395690:three_prime_UTR
TGGTGGAGATGGGTATTTGT+AGG 0.464447 tig0021959:+30003 None:intergenic
CACCTACCCTCACCCAAAAC+CGG 0.465185 tig0021959:-29684 Msa1395690:CDS
TGGTACACAGGGTGAGGATG+AGG 0.470660 tig0021959:+30055 None:intergenic
GGAGGAGAGTGGTACTTGTA+TGG 0.473439 tig0021959:+29908 None:intergenic
TAAGTGTGAACTGGTGGTGG+TGG 0.475303 tig0021959:+29746 None:intergenic
TACTTGTGAACTGGTGGTGG+TGG 0.478889 tig0021959:+30181 None:intergenic
GGTTTAGGGTAGGTGTGAAC+TGG 0.480065 tig0021959:+30262 None:intergenic
TGGTAGACTGGTTTAGGGTG+AGG 0.481256 tig0021959:+29773 None:intergenic
GACTGGTTTAGGGTGAGGGT+AGG 0.481274 tig0021959:+29778 None:intergenic
GGGTAAGTGTGAACTGGTGG+TGG 0.483553 tig0021959:+29743 None:intergenic
TTTGATTAAGATTGTTTAGA+GGG 0.483555 tig0021959:-29212 Msa1395690:exon
GGGTAGGTGTGAACTGGAGG+AGG 0.485961 tig0021959:+30268 None:intergenic
GAGGAGAATGGTAAACTGGG+TGG 0.487610 tig0021959:+29612 None:intergenic
TTGTAGGACTTCTTTGGTGG+TGG 0.488177 tig0021959:+30019 None:intergenic
TATTTGTAGGACTTCTTTGG+TGG 0.488416 tig0021959:+30016 None:intergenic
CTGGGTGGGGAACGTGTGGG+GGG 0.492090 tig0021959:+29627 None:intergenic
GTGTGGTGTTGGTGGTGGTG+GGG 0.493914 tig0021959:+29937 None:intergenic
TTGTTTGCTGAAATTTCAGA+TGG 0.495058 tig0021959:+30337 None:intergenic
AGGGTAGGTGTGATGAACTG+GGG 0.495351 tig0021959:+29838 None:intergenic
GGAGAATGGTAGACTGGGTG+TGG 0.503359 tig0021959:+30100 None:intergenic
GATGAGTAATGTGGTGGTGG+TGG 0.503703 tig0021959:+30298 None:intergenic
TGGTATACTGGTTTAGGGTG+AGG 0.507697 tig0021959:+30157 None:intergenic
GGCTTAGGGTAAGTGTGAAC+TGG 0.512993 tig0021959:+29737 None:intergenic
AGGAGAATGGTAAACTGGGT+GGG 0.515299 tig0021959:+29613 None:intergenic
GGGTACTTGTGAACTGGTGG+TGG 0.517137 tig0021959:+30178 None:intergenic
GAACTGGTGGTGGTGGAGAG+TGG 0.521227 tig0021959:+29657 None:intergenic
GAACTGGTGGTGGTGGAGAG+TGG 0.521227 tig0021959:+29753 None:intergenic
GGAGATGAGTAATGTGGTGG+TGG 0.526418 tig0021959:+30295 None:intergenic
ATGGTAAACTGGTTTAGGGT+AGG 0.528055 tig0021959:+30207 None:intergenic
GAACTGGTGGTGGTGGAGAA+TGG 0.530405 tig0021959:+30188 None:intergenic
AAACTGGGTGGGGAACGTGT+GGG 0.531189 tig0021959:+29624 None:intergenic
TTAGGGTAGGTGTGAACTGG+AGG 0.533218 tig0021959:+30265 None:intergenic
GGAGAGTGGTACACAGGGTG+AGG 0.537722 tig0021959:+30049 None:intergenic
GTGGTAGACTGGTTTAGGGT+AGG 0.540463 tig0021959:+29823 None:intergenic
GTGGTAGACTGGTTTAGGGT+AGG 0.540463 tig0021959:+29871 None:intergenic
GAGAGTGGTAGATTGGCTTA+GGG 0.544319 tig0021959:+29723 None:intergenic
GGTAGACTGGTTTAGGGTGA+GGG 0.550330 tig0021959:+29774 None:intergenic
GGTGGTGGAGAGTGGTAGAC+CGG 0.554181 tig0021959:+29665 None:intergenic
GGAGAATGGTAAACTGGGTG+GGG 0.556186 tig0021959:+29614 None:intergenic
TACTTGTATGGCTTCTTGTG+TGG 0.556733 tig0021959:+29920 None:intergenic
GCCATGCACAAAGAAGATCA+AGG 0.557315 tig0021959:-29262 Msa1395690:CDS
GTGGTGGAGAATGGTAGACT+GGG 0.561528 tig0021959:+30095 None:intergenic
GATGAGGGTACTTGTGAACT+GGG 0.567518 tig0021959:+30071 None:intergenic
GGACTGGAGGAGGAGGAGAA+TGG 0.567677 tig0021959:+29600 None:intergenic
GAGGAGGAGAATGGTAAACT+GGG 0.569161 tig0021959:+29609 None:intergenic
CCATGCACAAAGAAGATCAA+GGG 0.570172 tig0021959:-29261 Msa1395690:CDS
GTGGTAAACTGGTTTAGGGT+AGG 0.570919 tig0021959:+30252 None:intergenic
GGTAGACAGGGTGAGGGTGA+GGG 0.577845 tig0021959:+29963 None:intergenic
TTTAGGGTAGGTGTGAACTG+GGG 0.578197 tig0021959:+29883 None:intergenic
TTTAGGGTAGGTGTGAACTG+GGG 0.578197 tig0021959:+30219 None:intergenic
GGTGAGGGTGAGGGTACTTG+TGG 0.578511 tig0021959:+29972 None:intergenic
TTAGGGTAAGTGTGAACTGG+TGG 0.591700 tig0021959:+29740 None:intergenic
GGGAATGGTAGACAGGGTGA+GGG 0.591903 tig0021959:+29957 None:intergenic
GGGTAGGTGTGATGAACTGG+GGG 0.603246 tig0021959:+29839 None:intergenic
GGGGCAGTGCCTTACAGCTG+TGG 0.604123 tig0021959:+29148 None:intergenic
GGTATACTGGTTTAGGGTGA+GGG 0.605262 tig0021959:+30158 None:intergenic
GGTAGACTGGGTGTGGATGA+GGG 0.606300 tig0021959:+30107 None:intergenic
GGTGGAGGAGATGAGTAATG+TGG 0.608077 tig0021959:+30289 None:intergenic
TGAGGGTACTTGTGAACTGG+TGG 0.628017 tig0021959:+30175 None:intergenic
ATGAGGGTACTTGTGAACTG+GGG 0.632619 tig0021959:+30072 None:intergenic
GGGACAGATTACTATAATAG+GGG 0.634663 tig0021959:+29033 None:intergenic
TGTTTGCTGAAATTTCAGAT+GGG 0.639287 tig0021959:+30338 None:intergenic
GTGGTGGGGAATGGTAGACA+GGG 0.647557 tig0021959:+29951 None:intergenic
CATGCACAAAGAAGATCAAG+GGG 0.648903 tig0021959:-29260 Msa1395690:CDS
GGTACACAGGGTGAGGATGA+GGG 0.650631 tig0021959:+30056 None:intergenic
GGAGGAGATGAGTAATGTGG+TGG 0.655082 tig0021959:+30292 None:intergenic
CTGCAGACAAATGCATATTG+GGG 0.665084 tig0021959:+29129 None:intergenic
GTAATGTGGTGGTGGTGGAG+AGG 0.667025 tig0021959:+30303 None:intergenic
TGAGGGTACTTGTGAACTGG+GGG 0.698582 tig0021959:+30073 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATATTTGTCTCATATT+TGG - tig0021959:30039-30058 Msa1395690:CDS 15.0%
!! ATTAATATTTGTCTCATATT+TGG - tig0021959:30039-30058 Msa1395690:CDS 15.0%
!! ATTTGATTAAGATTGTTTAG+AGG - tig0021959:30207-30226 Msa1395690:CDS 20.0%
!! TTTGATTAAGATTGTTTAGA+GGG - tig0021959:30208-30227 Msa1395690:CDS 20.0%
!! ATTTGATTAAGATTGTTTAG+AGG - tig0021959:30207-30226 Msa1395690:CDS 20.0%
!! TTTGATTAAGATTGTTTAGA+GGG - tig0021959:30208-30227 Msa1395690:CDS 20.0%
! TGTCTCATATTTGGTTATTA+AGG - tig0021959:30048-30067 Msa1395690:CDS 25.0%
! GTCTCATATTTGGTTATTAA+GGG - tig0021959:30049-30068 Msa1395690:CDS 25.0%
! ACACAAATGCAAATATACAT+TGG + tig0021959:30105-30124 None:intergenic 25.0%
! ATGTATATTTGCATTTGTGT+AGG - tig0021959:30105-30124 Msa1395690:CDS 25.0%
!! GCATTGTAATTTTCAAAGTT+CGG - tig0021959:30324-30343 Msa1395690:CDS 25.0%
! TGTCTCATATTTGGTTATTA+AGG - tig0021959:30048-30067 Msa1395690:CDS 25.0%
! GTCTCATATTTGGTTATTAA+GGG - tig0021959:30049-30068 Msa1395690:CDS 25.0%
! ACACAAATGCAAATATACAT+TGG + tig0021959:30105-30124 None:intergenic 25.0%
! ATGTATATTTGCATTTGTGT+AGG - tig0021959:30105-30124 Msa1395690:CDS 25.0%
!! GCATTGTAATTTTCAAAGTT+CGG - tig0021959:30324-30343 Msa1395690:CDS 25.0%
! TGTTTGCTGAAATTTCAGAT+GGG + tig0021959:29085-29104 None:intergenic 30.0%
! TTGTTTGCTGAAATTTCAGA+TGG + tig0021959:29086-29105 None:intergenic 30.0%
TACCATATGATGCCAATTAT+GGG + tig0021959:29909-29928 None:intergenic 30.0%
TTACCATATGATGCCAATTA+TGG + tig0021959:29910-29929 None:intergenic 30.0%
! TGTTTGCTGAAATTTCAGAT+GGG + tig0021959:29085-29104 None:intergenic 30.0%
! TTGTTTGCTGAAATTTCAGA+TGG + tig0021959:29086-29105 None:intergenic 30.0%
TACCATATGATGCCAATTAT+GGG + tig0021959:29909-29928 None:intergenic 30.0%
TTACCATATGATGCCAATTA+TGG + tig0021959:29910-29929 None:intergenic 30.0%
! GAGAATGGTAAACTGGTTTA+GGG + tig0021959:29220-29239 None:intergenic 35.0%
TATTTGTAGGACTTCTTTGG+TGG + tig0021959:29407-29426 None:intergenic 35.0%
GATTTGTAGTAATAGTGTGG+TGG + tig0021959:29857-29876 None:intergenic 35.0%
! GGTGATTTGTAGTAATAGTG+TGG + tig0021959:29860-29879 None:intergenic 35.0%
! AATTATGGGCTATCTAGTTG+TGG + tig0021959:29895-29914 None:intergenic 35.0%
ACAACTAGATAGCCCATAAT+TGG - tig0021959:29894-29913 Msa1395690:CDS 35.0%
TGTTTCAATGCACAAGAGAT+GGG + tig0021959:29979-29998 None:intergenic 35.0%
ATGTTTCAATGCACAAGAGA+TGG + tig0021959:29980-29999 None:intergenic 35.0%
! GCATTGAAACATTCTTTTGC+TGG - tig0021959:29988-30007 Msa1395690:CDS 35.0%
TTTCATTATCCACAGCTGTA+AGG - tig0021959:30263-30282 Msa1395690:CDS 35.0%
ACTGCAGACAAATGCATATT+GGG + tig0021959:30295-30314 None:intergenic 35.0%
AACTGCAGACAAATGCATAT+TGG + tig0021959:30296-30315 None:intergenic 35.0%
! GAGAATGGTAAACTGGTTTA+GGG + tig0021959:29220-29239 None:intergenic 35.0%
TATTTGTAGGACTTCTTTGG+TGG + tig0021959:29407-29426 None:intergenic 35.0%
GATTTGTAGTAATAGTGTGG+TGG + tig0021959:29857-29876 None:intergenic 35.0%
! GGTGATTTGTAGTAATAGTG+TGG + tig0021959:29860-29879 None:intergenic 35.0%
! AATTATGGGCTATCTAGTTG+TGG + tig0021959:29895-29914 None:intergenic 35.0%
ACAACTAGATAGCCCATAAT+TGG - tig0021959:29894-29913 Msa1395690:CDS 35.0%
TGTTTCAATGCACAAGAGAT+GGG + tig0021959:29979-29998 None:intergenic 35.0%
ATGTTTCAATGCACAAGAGA+TGG + tig0021959:29980-29999 None:intergenic 35.0%
! GCATTGAAACATTCTTTTGC+TGG - tig0021959:29988-30007 Msa1395690:CDS 35.0%
TTTCATTATCCACAGCTGTA+AGG - tig0021959:30263-30282 Msa1395690:CDS 35.0%
ACTGCAGACAAATGCATATT+GGG + tig0021959:30295-30314 None:intergenic 35.0%
AACTGCAGACAAATGCATAT+TGG + tig0021959:30296-30315 None:intergenic 35.0%
TGGGAAACTCAAAAAGAGGA+TGG + tig0021959:29066-29085 None:intergenic 40.0%
CAGATGGGAAACTCAAAAAG+AGG + tig0021959:29070-29089 None:intergenic 40.0%
! GAGAGTGGTAAACTGGTTTA+GGG + tig0021959:29175-29194 None:intergenic 40.0%
! ATGGTAAACTGGTTTAGGGT+AGG + tig0021959:29216-29235 None:intergenic 40.0%
! GGAGAATGGTAAACTGGTTT+AGG + tig0021959:29221-29240 None:intergenic 40.0%
!! GAGAGTGGTATACTGGTTTA+GGG + tig0021959:29271-29290 None:intergenic 40.0%
GGGTATTTGTAGGACTTCTT+TGG + tig0021959:29410-29429 None:intergenic 40.0%
TACTTGTATGGCTTCTTGTG+TGG + tig0021959:29503-29522 None:intergenic 40.0%
TTGTAGTAATAGTGTGGTGG+AGG + tig0021959:29854-29873 None:intergenic 40.0%
AGCCCATAATTGGCATCATA+TGG - tig0021959:29904-29923 Msa1395690:CDS 40.0%
CCATGCACAAAGAAGATCAA+GGG - tig0021959:30159-30178 Msa1395690:intron 40.0%
CATGCACAAAGAAGATCAAG+GGG - tig0021959:30160-30179 Msa1395690:intron 40.0%
CTGCAGACAAATGCATATTG+GGG + tig0021959:30294-30313 None:intergenic 40.0%
TGGGAAACTCAAAAAGAGGA+TGG + tig0021959:29066-29085 None:intergenic 40.0%
CAGATGGGAAACTCAAAAAG+AGG + tig0021959:29070-29089 None:intergenic 40.0%
! GAGAGTGGTAAACTGGTTTA+GGG + tig0021959:29175-29194 None:intergenic 40.0%
! ATGGTAAACTGGTTTAGGGT+AGG + tig0021959:29216-29235 None:intergenic 40.0%
! GGAGAATGGTAAACTGGTTT+AGG + tig0021959:29221-29240 None:intergenic 40.0%
!! GAGAGTGGTATACTGGTTTA+GGG + tig0021959:29271-29290 None:intergenic 40.0%
GGGTATTTGTAGGACTTCTT+TGG + tig0021959:29410-29429 None:intergenic 40.0%
TACTTGTATGGCTTCTTGTG+TGG + tig0021959:29503-29522 None:intergenic 40.0%
TTGTAGTAATAGTGTGGTGG+AGG + tig0021959:29854-29873 None:intergenic 40.0%
AGCCCATAATTGGCATCATA+TGG - tig0021959:29904-29923 Msa1395690:CDS 40.0%
CCATGCACAAAGAAGATCAA+GGG - tig0021959:30159-30178 Msa1395690:intron 40.0%
CATGCACAAAGAAGATCAAG+GGG - tig0021959:30160-30179 Msa1395690:intron 40.0%
CTGCAGACAAATGCATATTG+GGG + tig0021959:30294-30313 None:intergenic 40.0%
! GTGGTAAACTGGTTTAGGGT+AGG + tig0021959:29171-29190 None:intergenic 45.0%
! GGAGAGTGGTAAACTGGTTT+AGG + tig0021959:29176-29195 None:intergenic 45.0%
! TTTAGGGTAGGTGTGAACTG+GGG + tig0021959:29159-29178 None:intergenic 45.0%
! GTTTAGGGTAGGTGTGAACT+GGG + tig0021959:29160-29179 None:intergenic 45.0%
!! GGTATACTGGTTTAGGGTGA+GGG + tig0021959:29265-29284 None:intergenic 45.0%
!! TGGTATACTGGTTTAGGGTG+AGG + tig0021959:29266-29285 None:intergenic 45.0%
!! GGAGAGTGGTATACTGGTTT+AGG + tig0021959:29272-29291 None:intergenic 45.0%
!! ATGAGGGTACTTGTGAACTG+GGG + tig0021959:29300-29319 None:intergenic 45.0%
!! GATGAGGGTACTTGTGAACT+GGG + tig0021959:29301-29320 None:intergenic 45.0%
!! ATGAGGGTACTTGTGAACTG+GGG + tig0021959:29300-29319 None:intergenic 45.0%
!! GATGAGGGTACTTGTGAACT+GGG + tig0021959:29301-29320 None:intergenic 45.0%
TTGTAGGACTTCTTTGGTGG+TGG + tig0021959:29404-29423 None:intergenic 45.0%
TGGTGGAGATGGGTATTTGT+AGG + tig0021959:29420-29439 None:intergenic 45.0%
TATGGCTTCTTGTGTGGTGT+TGG + tig0021959:29497-29516 None:intergenic 45.0%
! TTTAGGGTAGGTGTGAACTG+GGG + tig0021959:29159-29178 None:intergenic 45.0%
! GTTTAGGGTAGGTGTGAACT+GGG + tig0021959:29160-29179 None:intergenic 45.0%
!! GAGAGTGGTAGACTGGTTTA+GGG + tig0021959:29556-29575 None:intergenic 45.0%
TAGGGTAGGTGTGATGAACT+GGG + tig0021959:29586-29605 None:intergenic 45.0%
TTAGGGTAGGTGTGATGAAC+TGG + tig0021959:29587-29606 None:intergenic 45.0%
!! GAGAGTGGTAGACTGGTTTA+GGG + tig0021959:29556-29575 None:intergenic 45.0%
!! GAGAGTGGTAGACTGGTTTA+GGG + tig0021959:29556-29575 None:intergenic 45.0%
TTAGGGTAAGTGTGAACTGG+TGG + tig0021959:29683-29702 None:intergenic 45.0%
!! GAGAGTGGTAGATTGGCTTA+GGG + tig0021959:29700-29719 None:intergenic 45.0%
AGGAGAATGGTAAACTGGGT+GGG + tig0021959:29810-29829 None:intergenic 45.0%
GAGGAGGAGAATGGTAAACT+GGG + tig0021959:29814-29833 None:intergenic 45.0%
! AGTAATAGTGTGGTGGAGGT+GGG + tig0021959:29850-29869 None:intergenic 45.0%
! TAGTAATAGTGTGGTGGAGG+TGG + tig0021959:29851-29870 None:intergenic 45.0%
ATCTAGTTGTGGTAAGGTGG+AGG + tig0021959:29884-29903 None:intergenic 45.0%
GCTATCTAGTTGTGGTAAGG+TGG + tig0021959:29887-29906 None:intergenic 45.0%
TGGGCTATCTAGTTGTGGTA+AGG + tig0021959:29890-29909 None:intergenic 45.0%
GCCATGCACAAAGAAGATCA+AGG - tig0021959:30158-30177 Msa1395690:intron 45.0%
CCCTTGATCTTCTTTGTGCA+TGG + tig0021959:30162-30181 None:intergenic 45.0%
! GTGGTAAACTGGTTTAGGGT+AGG + tig0021959:29171-29190 None:intergenic 45.0%
! GGAGAGTGGTAAACTGGTTT+AGG + tig0021959:29176-29195 None:intergenic 45.0%
! TTTAGGGTAGGTGTGAACTG+GGG + tig0021959:29159-29178 None:intergenic 45.0%
! GTTTAGGGTAGGTGTGAACT+GGG + tig0021959:29160-29179 None:intergenic 45.0%
!! GGTATACTGGTTTAGGGTGA+GGG + tig0021959:29265-29284 None:intergenic 45.0%
!! TGGTATACTGGTTTAGGGTG+AGG + tig0021959:29266-29285 None:intergenic 45.0%
!! GGAGAGTGGTATACTGGTTT+AGG + tig0021959:29272-29291 None:intergenic 45.0%
!! ATGAGGGTACTTGTGAACTG+GGG + tig0021959:29300-29319 None:intergenic 45.0%
!! GATGAGGGTACTTGTGAACT+GGG + tig0021959:29301-29320 None:intergenic 45.0%
!! ATGAGGGTACTTGTGAACTG+GGG + tig0021959:29300-29319 None:intergenic 45.0%
!! GATGAGGGTACTTGTGAACT+GGG + tig0021959:29301-29320 None:intergenic 45.0%
TTGTAGGACTTCTTTGGTGG+TGG + tig0021959:29404-29423 None:intergenic 45.0%
TGGTGGAGATGGGTATTTGT+AGG + tig0021959:29420-29439 None:intergenic 45.0%
TATGGCTTCTTGTGTGGTGT+TGG + tig0021959:29497-29516 None:intergenic 45.0%
! TTTAGGGTAGGTGTGAACTG+GGG + tig0021959:29159-29178 None:intergenic 45.0%
! GTTTAGGGTAGGTGTGAACT+GGG + tig0021959:29160-29179 None:intergenic 45.0%
!! GAGAGTGGTAGACTGGTTTA+GGG + tig0021959:29556-29575 None:intergenic 45.0%
TAGGGTAGGTGTGATGAACT+GGG + tig0021959:29586-29605 None:intergenic 45.0%
TTAGGGTAGGTGTGATGAAC+TGG + tig0021959:29587-29606 None:intergenic 45.0%
!! GAGAGTGGTAGACTGGTTTA+GGG + tig0021959:29556-29575 None:intergenic 45.0%
!! GAGAGTGGTAGACTGGTTTA+GGG + tig0021959:29556-29575 None:intergenic 45.0%
TTAGGGTAAGTGTGAACTGG+TGG + tig0021959:29683-29702 None:intergenic 45.0%
!! GAGAGTGGTAGATTGGCTTA+GGG + tig0021959:29700-29719 None:intergenic 45.0%
AGGAGAATGGTAAACTGGGT+GGG + tig0021959:29810-29829 None:intergenic 45.0%
GAGGAGGAGAATGGTAAACT+GGG + tig0021959:29814-29833 None:intergenic 45.0%
! AGTAATAGTGTGGTGGAGGT+GGG + tig0021959:29850-29869 None:intergenic 45.0%
! TAGTAATAGTGTGGTGGAGG+TGG + tig0021959:29851-29870 None:intergenic 45.0%
ATCTAGTTGTGGTAAGGTGG+AGG + tig0021959:29884-29903 None:intergenic 45.0%
GCTATCTAGTTGTGGTAAGG+TGG + tig0021959:29887-29906 None:intergenic 45.0%
TGGGCTATCTAGTTGTGGTA+AGG + tig0021959:29890-29909 None:intergenic 45.0%
GCCATGCACAAAGAAGATCA+AGG - tig0021959:30158-30177 Msa1395690:intron 45.0%
CCCTTGATCTTCTTTGTGCA+TGG + tig0021959:30162-30181 None:intergenic 45.0%
!! GATGAGTAATGTGGTGGTGG+TGG + tig0021959:29125-29144 None:intergenic 50.0%
GGAGATGAGTAATGTGGTGG+TGG + tig0021959:29128-29147 None:intergenic 50.0%
GGAGGAGATGAGTAATGTGG+TGG + tig0021959:29131-29150 None:intergenic 50.0%
GGTGGAGGAGATGAGTAATG+TGG + tig0021959:29134-29153 None:intergenic 50.0%
TTAGGGTAGGTGTGAACTGG+AGG + tig0021959:29158-29177 None:intergenic 50.0%
! GGTTTAGGGTAGGTGTGAAC+TGG + tig0021959:29161-29180 None:intergenic 50.0%
TTAGGGTAGGTGTGAACTGG+GGG + tig0021959:29158-29177 None:intergenic 50.0%
! GGTTTAGGGTAGGTGTGAAC+TGG + tig0021959:29161-29180 None:intergenic 50.0%
!! GGTGGTGGAGAATGGTAAAC+TGG + tig0021959:29227-29246 None:intergenic 50.0%
!! TACTTGTGAACTGGTGGTGG+TGG + tig0021959:29242-29261 None:intergenic 50.0%
!! TGAGGGTACTTGTGAACTGG+TGG + tig0021959:29248-29267 None:intergenic 50.0%
!! TGAGGGTACTTGTGAACTGG+GGG + tig0021959:29248-29267 None:intergenic 50.0%
!! GGATGAGGGTACTTGTGAAC+TGG + tig0021959:29302-29321 None:intergenic 50.0%
! GTGGTGGAGAATGGTAGACT+GGG + tig0021959:29328-29347 None:intergenic 50.0%
!! TGAGGGTACTTGTGAACTGG+GGG + tig0021959:29248-29267 None:intergenic 50.0%
!! GGATGAGGGTACTTGTGAAC+TGG + tig0021959:29302-29321 None:intergenic 50.0%
!! ACTTCTTTGGTGGTGGTGGT+GGG + tig0021959:29397-29416 None:intergenic 50.0%
!! TAGGACTTCTTTGGTGGTGG+TGG + tig0021959:29401-29420 None:intergenic 50.0%
!! TGAGGGTACTTGTGGAATGG+GGG + tig0021959:29443-29462 None:intergenic 50.0%
!! GTGAGGGTACTTGTGGAATG+GGG + tig0021959:29444-29463 None:intergenic 50.0%
!! GGTGAGGGTACTTGTGGAAT+GGG + tig0021959:29445-29464 None:intergenic 50.0%
!! TTCTTGTGTGGTGTTGGTGG+TGG + tig0021959:29491-29510 None:intergenic 50.0%
GGAGGAGAGTGGTACTTGTA+TGG + tig0021959:29515-29534 None:intergenic 50.0%
TTAGGGTAGGTGTGAACTGG+GGG + tig0021959:29158-29177 None:intergenic 50.0%
! GGTTTAGGGTAGGTGTGAAC+TGG + tig0021959:29161-29180 None:intergenic 50.0%
!! GTGGTAGACTGGTTTAGGGT+AGG + tig0021959:29552-29571 None:intergenic 50.0%
!! GGAGAGTGGTAGACTGGTTT+AGG + tig0021959:29557-29576 None:intergenic 50.0%
AGGGTAGGTGTGATGAACTG+GGG + tig0021959:29585-29604 None:intergenic 50.0%
!! GTGGTAGACTGGTTTAGGGT+AGG + tig0021959:29552-29571 None:intergenic 50.0%
!! GGAGAGTGGTAGACTGGTTT+AGG + tig0021959:29557-29576 None:intergenic 50.0%
!! GGTAGACTGGTTTAGGGTGA+GGG + tig0021959:29649-29668 None:intergenic 50.0%
!! TGGTAGACTGGTTTAGGGTG+AGG + tig0021959:29650-29669 None:intergenic 50.0%
!! GGAGAGTGGTAGACTGGTTT+AGG + tig0021959:29557-29576 None:intergenic 50.0%
!! TAAGTGTGAACTGGTGGTGG+TGG + tig0021959:29677-29696 None:intergenic 50.0%
GGCTTAGGGTAAGTGTGAAC+TGG + tig0021959:29686-29705 None:intergenic 50.0%
!! GGAGAGTGGTAGATTGGCTT+AGG + tig0021959:29701-29720 None:intergenic 50.0%
!! GAGAGTGGTAGACCGGTTTT+GGG + tig0021959:29751-29770 None:intergenic 50.0%
GGAGAATGGTAAACTGGGTG+GGG + tig0021959:29809-29828 None:intergenic 50.0%
GAGGAGAATGGTAAACTGGG+TGG + tig0021959:29811-29830 None:intergenic 50.0%
GGAGGAGGAGAATGGTAAAC+TGG + tig0021959:29815-29834 None:intergenic 50.0%
! GTAATAGTGTGGTGGAGGTG+GGG + tig0021959:29849-29868 None:intergenic 50.0%
TAGTTGTGGTAAGGTGGAGG+AGG + tig0021959:29881-29900 None:intergenic 50.0%
!! GATGAGTAATGTGGTGGTGG+TGG + tig0021959:29125-29144 None:intergenic 50.0%
GGAGATGAGTAATGTGGTGG+TGG + tig0021959:29128-29147 None:intergenic 50.0%
GGAGGAGATGAGTAATGTGG+TGG + tig0021959:29131-29150 None:intergenic 50.0%
GGTGGAGGAGATGAGTAATG+TGG + tig0021959:29134-29153 None:intergenic 50.0%
TTAGGGTAGGTGTGAACTGG+AGG + tig0021959:29158-29177 None:intergenic 50.0%
! GGTTTAGGGTAGGTGTGAAC+TGG + tig0021959:29161-29180 None:intergenic 50.0%
TTAGGGTAGGTGTGAACTGG+GGG + tig0021959:29158-29177 None:intergenic 50.0%
! GGTTTAGGGTAGGTGTGAAC+TGG + tig0021959:29161-29180 None:intergenic 50.0%
!! GGTGGTGGAGAATGGTAAAC+TGG + tig0021959:29227-29246 None:intergenic 50.0%
!! TACTTGTGAACTGGTGGTGG+TGG + tig0021959:29242-29261 None:intergenic 50.0%
!! TGAGGGTACTTGTGAACTGG+TGG + tig0021959:29248-29267 None:intergenic 50.0%
!! TGAGGGTACTTGTGAACTGG+GGG + tig0021959:29248-29267 None:intergenic 50.0%
!! GGATGAGGGTACTTGTGAAC+TGG + tig0021959:29302-29321 None:intergenic 50.0%
! GTGGTGGAGAATGGTAGACT+GGG + tig0021959:29328-29347 None:intergenic 50.0%
!! TGAGGGTACTTGTGAACTGG+GGG + tig0021959:29248-29267 None:intergenic 50.0%
!! GGATGAGGGTACTTGTGAAC+TGG + tig0021959:29302-29321 None:intergenic 50.0%
!! ACTTCTTTGGTGGTGGTGGT+GGG + tig0021959:29397-29416 None:intergenic 50.0%
!! TAGGACTTCTTTGGTGGTGG+TGG + tig0021959:29401-29420 None:intergenic 50.0%
!! TGAGGGTACTTGTGGAATGG+GGG + tig0021959:29443-29462 None:intergenic 50.0%
!! GTGAGGGTACTTGTGGAATG+GGG + tig0021959:29444-29463 None:intergenic 50.0%
!! GGTGAGGGTACTTGTGGAAT+GGG + tig0021959:29445-29464 None:intergenic 50.0%
!! TTCTTGTGTGGTGTTGGTGG+TGG + tig0021959:29491-29510 None:intergenic 50.0%
GGAGGAGAGTGGTACTTGTA+TGG + tig0021959:29515-29534 None:intergenic 50.0%
TTAGGGTAGGTGTGAACTGG+GGG + tig0021959:29158-29177 None:intergenic 50.0%
! GGTTTAGGGTAGGTGTGAAC+TGG + tig0021959:29161-29180 None:intergenic 50.0%
!! GTGGTAGACTGGTTTAGGGT+AGG + tig0021959:29552-29571 None:intergenic 50.0%
!! GGAGAGTGGTAGACTGGTTT+AGG + tig0021959:29557-29576 None:intergenic 50.0%
AGGGTAGGTGTGATGAACTG+GGG + tig0021959:29585-29604 None:intergenic 50.0%
!! GTGGTAGACTGGTTTAGGGT+AGG + tig0021959:29552-29571 None:intergenic 50.0%
!! GGAGAGTGGTAGACTGGTTT+AGG + tig0021959:29557-29576 None:intergenic 50.0%
!! GGTAGACTGGTTTAGGGTGA+GGG + tig0021959:29649-29668 None:intergenic 50.0%
!! TGGTAGACTGGTTTAGGGTG+AGG + tig0021959:29650-29669 None:intergenic 50.0%
!! GGAGAGTGGTAGACTGGTTT+AGG + tig0021959:29557-29576 None:intergenic 50.0%
!! TAAGTGTGAACTGGTGGTGG+TGG + tig0021959:29677-29696 None:intergenic 50.0%
GGCTTAGGGTAAGTGTGAAC+TGG + tig0021959:29686-29705 None:intergenic 50.0%
!! GGAGAGTGGTAGATTGGCTT+AGG + tig0021959:29701-29720 None:intergenic 50.0%
!! GAGAGTGGTAGACCGGTTTT+GGG + tig0021959:29751-29770 None:intergenic 50.0%
GGAGAATGGTAAACTGGGTG+GGG + tig0021959:29809-29828 None:intergenic 50.0%
GAGGAGAATGGTAAACTGGG+TGG + tig0021959:29811-29830 None:intergenic 50.0%
GGAGGAGGAGAATGGTAAAC+TGG + tig0021959:29815-29834 None:intergenic 50.0%
! GTAATAGTGTGGTGGAGGTG+GGG + tig0021959:29849-29868 None:intergenic 50.0%
TAGTTGTGGTAAGGTGGAGG+AGG + tig0021959:29881-29900 None:intergenic 50.0%
!! TGGTGGTGGTGGAGAGGAAT+AGG + tig0021959:29114-29133 None:intergenic 55.0%
!! GTAATGTGGTGGTGGTGGAG+AGG + tig0021959:29120-29139 None:intergenic 55.0%
TAGGTGTGAACTGGAGGAGG+TGG + tig0021959:29152-29171 None:intergenic 55.0%
!! GGTGGTGGAGAGTGGTAAAC+TGG + tig0021959:29182-29201 None:intergenic 55.0%
!! GAACTGGTGGTGGTGGAGAA+TGG + tig0021959:29235-29254 None:intergenic 55.0%
GGGTACTTGTGAACTGGTGG+TGG + tig0021959:29245-29264 None:intergenic 55.0%
!! GGGTGAGGGTACTTGTGAAC+TGG + tig0021959:29251-29270 None:intergenic 55.0%
!! GGTGGTGGAGAGTGGTATAC+TGG + tig0021959:29278-29297 None:intergenic 55.0%
TACTTGTGAACTGGGGGTGG+TGG + tig0021959:29293-29312 None:intergenic 55.0%
GGTAGACTGGGTGTGGATGA+GGG + tig0021959:29316-29335 None:intergenic 55.0%
TGGTAGACTGGGTGTGGATG+AGG + tig0021959:29317-29336 None:intergenic 55.0%
GGAGAATGGTAGACTGGGTG+TGG + tig0021959:29323-29342 None:intergenic 55.0%
!! GGTGGTGGAGAATGGTAGAC+TGG + tig0021959:29329-29348 None:intergenic 55.0%
TACTTGTGAACTGGGGGTGG+TGG + tig0021959:29293-29312 None:intergenic 55.0%
GGTACACAGGGTGAGGATGA+GGG + tig0021959:29367-29386 None:intergenic 55.0%
TGGTACACAGGGTGAGGATG+AGG + tig0021959:29368-29387 None:intergenic 55.0%
!! TTCTTTGGTGGTGGTGGTGG+GGG + tig0021959:29395-29414 None:intergenic 55.0%
!! CTTCTTTGGTGGTGGTGGTG+GGG + tig0021959:29396-29415 None:intergenic 55.0%
!! GACTTCTTTGGTGGTGGTGG+TGG + tig0021959:29398-29417 None:intergenic 55.0%
TACTTGTGGAATGGGGGTGG+TGG + tig0021959:29437-29456 None:intergenic 55.0%
!! GGGTGAGGGTACTTGTGGAA+TGG + tig0021959:29446-29465 None:intergenic 55.0%
GGGAATGGTAGACAGGGTGA+GGG + tig0021959:29466-29485 None:intergenic 55.0%
! GTGGTGGGGAATGGTAGACA+GGG + tig0021959:29472-29491 None:intergenic 55.0%
!! TGTGTGGTGTTGGTGGTGGT+GGG + tig0021959:29487-29506 None:intergenic 55.0%
!! TTGTGTGGTGTTGGTGGTGG+TGG + tig0021959:29488-29507 None:intergenic 55.0%
! GGCTTCTTGTGTGGTGTTGG+TGG + tig0021959:29494-29513 None:intergenic 55.0%
TAGGTGTGATGAACTGGGGG+TGG + tig0021959:29581-29600 None:intergenic 55.0%
GGGTAGGTGTGATGAACTGG+GGG + tig0021959:29584-29603 None:intergenic 55.0%
TGAGGGTAGGTGTGAACTGG+GGG + tig0021959:29632-29651 None:intergenic 55.0%
GTGAGGGTAGGTGTGAACTG+GGG + tig0021959:29633-29652 None:intergenic 55.0%
GGTGAGGGTAGGTGTGAACT+GGG + tig0021959:29634-29653 None:intergenic 55.0%
!! GACTGGTTTAGGGTGAGGGT+AGG + tig0021959:29645-29664 None:intergenic 55.0%
GGGTAAGTGTGAACTGGTGG+TGG + tig0021959:29680-29699 None:intergenic 55.0%
GGTGGAGGAGAGTGGTAGAT+TGG + tig0021959:29707-29726 None:intergenic 55.0%
TGAGGGTAGGTGTGAACTGG+GGG + tig0021959:29632-29651 None:intergenic 55.0%
GTGAGGGTAGGTGTGAACTG+GGG + tig0021959:29633-29652 None:intergenic 55.0%
GGTGAGGGTAGGTGTGAACT+GGG + tig0021959:29634-29653 None:intergenic 55.0%
CACCTACCCTCACCCAAAAC+CGG - tig0021959:29736-29755 Msa1395690:CDS 55.0%
!!! GGTAGACCGGTTTTGGGTGA+GGG + tig0021959:29745-29764 None:intergenic 55.0%
!!! TGGTAGACCGGTTTTGGGTG+AGG + tig0021959:29746-29765 None:intergenic 55.0%
!! GGAGAGTGGTAGACCGGTTT+TGG + tig0021959:29752-29771 None:intergenic 55.0%
!! TAGGTGTGAACTGGTGGTGG+TGG + tig0021959:29773-29792 None:intergenic 55.0%
AAACTGGGTGGGGAACGTGT+GGG + tig0021959:29799-29818 None:intergenic 55.0%
TAAACTGGGTGGGGAACGTG+TGG + tig0021959:29800-29819 None:intergenic 55.0%
!! TGGTGGTGGTGGAGAGGAAT+AGG + tig0021959:29114-29133 None:intergenic 55.0%
!! GTAATGTGGTGGTGGTGGAG+AGG + tig0021959:29120-29139 None:intergenic 55.0%
TAGGTGTGAACTGGAGGAGG+TGG + tig0021959:29152-29171 None:intergenic 55.0%
!! GGTGGTGGAGAGTGGTAAAC+TGG + tig0021959:29182-29201 None:intergenic 55.0%
!! GAACTGGTGGTGGTGGAGAA+TGG + tig0021959:29235-29254 None:intergenic 55.0%
GGGTACTTGTGAACTGGTGG+TGG + tig0021959:29245-29264 None:intergenic 55.0%
!! GGGTGAGGGTACTTGTGAAC+TGG + tig0021959:29251-29270 None:intergenic 55.0%
!! GGTGGTGGAGAGTGGTATAC+TGG + tig0021959:29278-29297 None:intergenic 55.0%
TACTTGTGAACTGGGGGTGG+TGG + tig0021959:29293-29312 None:intergenic 55.0%
GGTAGACTGGGTGTGGATGA+GGG + tig0021959:29316-29335 None:intergenic 55.0%
TGGTAGACTGGGTGTGGATG+AGG + tig0021959:29317-29336 None:intergenic 55.0%
GGAGAATGGTAGACTGGGTG+TGG + tig0021959:29323-29342 None:intergenic 55.0%
!! GGTGGTGGAGAATGGTAGAC+TGG + tig0021959:29329-29348 None:intergenic 55.0%
TACTTGTGAACTGGGGGTGG+TGG + tig0021959:29293-29312 None:intergenic 55.0%
GGTACACAGGGTGAGGATGA+GGG + tig0021959:29367-29386 None:intergenic 55.0%
TGGTACACAGGGTGAGGATG+AGG + tig0021959:29368-29387 None:intergenic 55.0%
!! TTCTTTGGTGGTGGTGGTGG+GGG + tig0021959:29395-29414 None:intergenic 55.0%
!! CTTCTTTGGTGGTGGTGGTG+GGG + tig0021959:29396-29415 None:intergenic 55.0%
!! GACTTCTTTGGTGGTGGTGG+TGG + tig0021959:29398-29417 None:intergenic 55.0%
TACTTGTGGAATGGGGGTGG+TGG + tig0021959:29437-29456 None:intergenic 55.0%
!! GGGTGAGGGTACTTGTGGAA+TGG + tig0021959:29446-29465 None:intergenic 55.0%
GGGAATGGTAGACAGGGTGA+GGG + tig0021959:29466-29485 None:intergenic 55.0%
! GTGGTGGGGAATGGTAGACA+GGG + tig0021959:29472-29491 None:intergenic 55.0%
!! TGTGTGGTGTTGGTGGTGGT+GGG + tig0021959:29487-29506 None:intergenic 55.0%
!! TTGTGTGGTGTTGGTGGTGG+TGG + tig0021959:29488-29507 None:intergenic 55.0%
! GGCTTCTTGTGTGGTGTTGG+TGG + tig0021959:29494-29513 None:intergenic 55.0%
TAGGTGTGATGAACTGGGGG+TGG + tig0021959:29581-29600 None:intergenic 55.0%
GGGTAGGTGTGATGAACTGG+GGG + tig0021959:29584-29603 None:intergenic 55.0%
TGAGGGTAGGTGTGAACTGG+GGG + tig0021959:29632-29651 None:intergenic 55.0%
GTGAGGGTAGGTGTGAACTG+GGG + tig0021959:29633-29652 None:intergenic 55.0%
GGTGAGGGTAGGTGTGAACT+GGG + tig0021959:29634-29653 None:intergenic 55.0%
!! GACTGGTTTAGGGTGAGGGT+AGG + tig0021959:29645-29664 None:intergenic 55.0%
GGGTAAGTGTGAACTGGTGG+TGG + tig0021959:29680-29699 None:intergenic 55.0%
GGTGGAGGAGAGTGGTAGAT+TGG + tig0021959:29707-29726 None:intergenic 55.0%
TGAGGGTAGGTGTGAACTGG+GGG + tig0021959:29632-29651 None:intergenic 55.0%
GTGAGGGTAGGTGTGAACTG+GGG + tig0021959:29633-29652 None:intergenic 55.0%
GGTGAGGGTAGGTGTGAACT+GGG + tig0021959:29634-29653 None:intergenic 55.0%
CACCTACCCTCACCCAAAAC+CGG - tig0021959:29736-29755 Msa1395690:CDS 55.0%
!!! GGTAGACCGGTTTTGGGTGA+GGG + tig0021959:29745-29764 None:intergenic 55.0%
!!! TGGTAGACCGGTTTTGGGTG+AGG + tig0021959:29746-29765 None:intergenic 55.0%
!! GGAGAGTGGTAGACCGGTTT+TGG + tig0021959:29752-29771 None:intergenic 55.0%
!! TAGGTGTGAACTGGTGGTGG+TGG + tig0021959:29773-29792 None:intergenic 55.0%
AAACTGGGTGGGGAACGTGT+GGG + tig0021959:29799-29818 None:intergenic 55.0%
TAAACTGGGTGGGGAACGTG+TGG + tig0021959:29800-29819 None:intergenic 55.0%
GTGTGAACTGGAGGAGGTGG+AGG + tig0021959:29149-29168 None:intergenic 60.0%
GGGTAGGTGTGAACTGGAGG+AGG + tig0021959:29155-29174 None:intergenic 60.0%
TAGGTGTGAACTGGGGGTGG+TGG + tig0021959:29197-29216 None:intergenic 60.0%
GGGTACTTGTGAACTGGGGG+TGG + tig0021959:29296-29315 None:intergenic 60.0%
!! GAACTGGGGGTGGTGGAGAA+TGG + tig0021959:29337-29356 None:intergenic 60.0%
GGGTACTTGTGAACTGGGGG+TGG + tig0021959:29296-29315 None:intergenic 60.0%
GGAGAGTGGTACACAGGGTG+AGG + tig0021959:29374-29393 None:intergenic 60.0%
GTGGGGGAGAGTGGTACACA+GGG + tig0021959:29379-29398 None:intergenic 60.0%
!! GGAATGGGGGTGGTGGAGAT+GGG + tig0021959:29430-29449 None:intergenic 60.0%
!! TGGAATGGGGGTGGTGGAGA+TGG + tig0021959:29431-29450 None:intergenic 60.0%
GGGTACTTGTGGAATGGGGG+TGG + tig0021959:29440-29459 None:intergenic 60.0%
!! GGTGAGGGTGAGGGTACTTG+TGG + tig0021959:29451-29470 None:intergenic 60.0%
GGTAGACAGGGTGAGGGTGA+GGG + tig0021959:29460-29479 None:intergenic 60.0%
TGGTAGACAGGGTGAGGGTG+AGG + tig0021959:29461-29480 None:intergenic 60.0%
GGGGAATGGTAGACAGGGTG+AGG + tig0021959:29467-29486 None:intergenic 60.0%
!! GGTGGTGGGGAATGGTAGAC+AGG + tig0021959:29473-29492 None:intergenic 60.0%
!! GTGTTGGTGGTGGTGGGGAA+TGG + tig0021959:29481-29500 None:intergenic 60.0%
!! GTGTGGTGTTGGTGGTGGTG+GGG + tig0021959:29486-29505 None:intergenic 60.0%
TAGGTGTGAACTGGGGGTGG+AGG + tig0021959:29197-29216 None:intergenic 60.0%
GGTGGAGGAGAGTGGTAGAC+TGG + tig0021959:29563-29582 None:intergenic 60.0%
GTGTGATGAACTGGGGGTGG+AGG + tig0021959:29578-29597 None:intergenic 60.0%
GGTGGAGGAGAGTGGTAGAC+TGG + tig0021959:29563-29582 None:intergenic 60.0%
TAGGTGTGAACTGGGGGTGG+AGG + tig0021959:29197-29216 None:intergenic 60.0%
GGGTGAGGGTAGGTGTGAAC+TGG + tig0021959:29635-29654 None:intergenic 60.0%
!! GGTGGTGGAGAGTGGTAGAC+TGG + tig0021959:29662-29681 None:intergenic 60.0%
!! GAACTGGTGGTGGTGGAGAG+TGG + tig0021959:29670-29689 None:intergenic 60.0%
TAGGTGTGAACTGGGGGTGG+AGG + tig0021959:29197-29216 None:intergenic 60.0%
GGGTGAGGGTAGGTGTGAAC+TGG + tig0021959:29635-29654 None:intergenic 60.0%
!!! GACCGGTTTTGGGTGAGGGT+AGG + tig0021959:29741-29760 None:intergenic 60.0%
!! GGTGGTGGAGAGTGGTAGAC+CGG + tig0021959:29662-29681 None:intergenic 60.0%
!! GAACTGGTGGTGGTGGAGAG+TGG + tig0021959:29670-29689 None:intergenic 60.0%
GGGTAGGTGTGAACTGGTGG+TGG + tig0021959:29776-29795 None:intergenic 60.0%
TGTGGGGGGTAGGTGTGAAC+TGG + tig0021959:29782-29801 None:intergenic 60.0%
AACTGGGTGGGGAACGTGTG+GGG + tig0021959:29798-29817 None:intergenic 60.0%
GGACTGGAGGAGGAGGAGAA+TGG + tig0021959:29823-29842 None:intergenic 60.0%
! AGTGTGGTGGAGGTGGGGAA+TGG + tig0021959:29844-29863 None:intergenic 60.0%
GTGTGAACTGGAGGAGGTGG+AGG + tig0021959:29149-29168 None:intergenic 60.0%
GGGTAGGTGTGAACTGGAGG+AGG + tig0021959:29155-29174 None:intergenic 60.0%
TAGGTGTGAACTGGGGGTGG+TGG + tig0021959:29197-29216 None:intergenic 60.0%
GGGTACTTGTGAACTGGGGG+TGG + tig0021959:29296-29315 None:intergenic 60.0%
!! GAACTGGGGGTGGTGGAGAA+TGG + tig0021959:29337-29356 None:intergenic 60.0%
GGGTACTTGTGAACTGGGGG+TGG + tig0021959:29296-29315 None:intergenic 60.0%
GGAGAGTGGTACACAGGGTG+AGG + tig0021959:29374-29393 None:intergenic 60.0%
GTGGGGGAGAGTGGTACACA+GGG + tig0021959:29379-29398 None:intergenic 60.0%
!! GGAATGGGGGTGGTGGAGAT+GGG + tig0021959:29430-29449 None:intergenic 60.0%
!! TGGAATGGGGGTGGTGGAGA+TGG + tig0021959:29431-29450 None:intergenic 60.0%
GGGTACTTGTGGAATGGGGG+TGG + tig0021959:29440-29459 None:intergenic 60.0%
!! GGTGAGGGTGAGGGTACTTG+TGG + tig0021959:29451-29470 None:intergenic 60.0%
GGTAGACAGGGTGAGGGTGA+GGG + tig0021959:29460-29479 None:intergenic 60.0%
TGGTAGACAGGGTGAGGGTG+AGG + tig0021959:29461-29480 None:intergenic 60.0%
GGGGAATGGTAGACAGGGTG+AGG + tig0021959:29467-29486 None:intergenic 60.0%
!! GGTGGTGGGGAATGGTAGAC+AGG + tig0021959:29473-29492 None:intergenic 60.0%
!! GTGTTGGTGGTGGTGGGGAA+TGG + tig0021959:29481-29500 None:intergenic 60.0%
!! GTGTGGTGTTGGTGGTGGTG+GGG + tig0021959:29486-29505 None:intergenic 60.0%
TAGGTGTGAACTGGGGGTGG+AGG + tig0021959:29197-29216 None:intergenic 60.0%
GGTGGAGGAGAGTGGTAGAC+TGG + tig0021959:29563-29582 None:intergenic 60.0%
GTGTGATGAACTGGGGGTGG+AGG + tig0021959:29578-29597 None:intergenic 60.0%
GGTGGAGGAGAGTGGTAGAC+TGG + tig0021959:29563-29582 None:intergenic 60.0%
TAGGTGTGAACTGGGGGTGG+AGG + tig0021959:29197-29216 None:intergenic 60.0%
GGGTGAGGGTAGGTGTGAAC+TGG + tig0021959:29635-29654 None:intergenic 60.0%
!! GGTGGTGGAGAGTGGTAGAC+TGG + tig0021959:29662-29681 None:intergenic 60.0%
!! GAACTGGTGGTGGTGGAGAG+TGG + tig0021959:29670-29689 None:intergenic 60.0%
TAGGTGTGAACTGGGGGTGG+AGG + tig0021959:29197-29216 None:intergenic 60.0%
GGGTGAGGGTAGGTGTGAAC+TGG + tig0021959:29635-29654 None:intergenic 60.0%
!!! GACCGGTTTTGGGTGAGGGT+AGG + tig0021959:29741-29760 None:intergenic 60.0%
!! GGTGGTGGAGAGTGGTAGAC+CGG + tig0021959:29662-29681 None:intergenic 60.0%
!! GAACTGGTGGTGGTGGAGAG+TGG + tig0021959:29670-29689 None:intergenic 60.0%
GGGTAGGTGTGAACTGGTGG+TGG + tig0021959:29776-29795 None:intergenic 60.0%
TGTGGGGGGTAGGTGTGAAC+TGG + tig0021959:29782-29801 None:intergenic 60.0%
AACTGGGTGGGGAACGTGTG+GGG + tig0021959:29798-29817 None:intergenic 60.0%
GGACTGGAGGAGGAGGAGAA+TGG + tig0021959:29823-29842 None:intergenic 60.0%
! AGTGTGGTGGAGGTGGGGAA+TGG + tig0021959:29844-29863 None:intergenic 60.0%
!! GAACTGGGGGTGGTGGAGAG+TGG + tig0021959:29190-29209 None:intergenic 65.0%
GGGTAGGTGTGAACTGGGGG+TGG + tig0021959:29200-29219 None:intergenic 65.0%
!! GAACTGGGGGTGGTGGAGAG+TGG + tig0021959:29190-29209 None:intergenic 65.0%
GGTGGGGGAGAGTGGTACAC+AGG + tig0021959:29380-29399 None:intergenic 65.0%
GAACTGGGGGTGGAGGAGAG+TGG + tig0021959:29526-29545 None:intergenic 65.0%
GGGTAGGTGTGAACTGGGGG+TGG + tig0021959:29200-29219 None:intergenic 65.0%
GAACTGGGGGTGGAGGAGAG+TGG + tig0021959:29526-29545 None:intergenic 65.0%
GAACTGGGGGTGGAGGAGAG+TGG + tig0021959:29526-29545 None:intergenic 65.0%
GGGTAGGTGTGAACTGGGGG+TGG + tig0021959:29200-29219 None:intergenic 65.0%
GAACTGGGGGTGGAGGAGAG+TGG + tig0021959:29526-29545 None:intergenic 65.0%
GGGTAGGTGTGAACTGGGGG+TGG + tig0021959:29200-29219 None:intergenic 65.0%
GGGGGGTAGGTGTGAACTGG+TGG + tig0021959:29779-29798 None:intergenic 65.0%
ACTGGGTGGGGAACGTGTGG+GGG + tig0021959:29797-29816 None:intergenic 65.0%
!! GGGGAATGGACTGGAGGAGG+AGG + tig0021959:29830-29849 None:intergenic 65.0%
!! GGTGGGGAATGGACTGGAGG+AGG + tig0021959:29833-29852 None:intergenic 65.0%
!! GGAGGTGGGGAATGGACTGG+AGG + tig0021959:29836-29855 None:intergenic 65.0%
GGTGGAGGTGGGGAATGGAC+TGG + tig0021959:29839-29858 None:intergenic 65.0%
GGGGCAGTGCCTTACAGCTG+TGG + tig0021959:30275-30294 None:intergenic 65.0%
!! GAACTGGGGGTGGTGGAGAG+TGG + tig0021959:29190-29209 None:intergenic 65.0%
GGGTAGGTGTGAACTGGGGG+TGG + tig0021959:29200-29219 None:intergenic 65.0%
!! GAACTGGGGGTGGTGGAGAG+TGG + tig0021959:29190-29209 None:intergenic 65.0%
GGTGGGGGAGAGTGGTACAC+AGG + tig0021959:29380-29399 None:intergenic 65.0%
GAACTGGGGGTGGAGGAGAG+TGG + tig0021959:29526-29545 None:intergenic 65.0%
GGGTAGGTGTGAACTGGGGG+TGG + tig0021959:29200-29219 None:intergenic 65.0%
GAACTGGGGGTGGAGGAGAG+TGG + tig0021959:29526-29545 None:intergenic 65.0%
GAACTGGGGGTGGAGGAGAG+TGG + tig0021959:29526-29545 None:intergenic 65.0%
GGGTAGGTGTGAACTGGGGG+TGG + tig0021959:29200-29219 None:intergenic 65.0%
GAACTGGGGGTGGAGGAGAG+TGG + tig0021959:29526-29545 None:intergenic 65.0%
GGGTAGGTGTGAACTGGGGG+TGG + tig0021959:29200-29219 None:intergenic 65.0%
GGGGGGTAGGTGTGAACTGG+TGG + tig0021959:29779-29798 None:intergenic 65.0%
ACTGGGTGGGGAACGTGTGG+GGG + tig0021959:29797-29816 None:intergenic 65.0%
!! GGGGAATGGACTGGAGGAGG+AGG + tig0021959:29830-29849 None:intergenic 65.0%
!! GGTGGGGAATGGACTGGAGG+AGG + tig0021959:29833-29852 None:intergenic 65.0%
!! GGAGGTGGGGAATGGACTGG+AGG + tig0021959:29836-29855 None:intergenic 65.0%
GGTGGAGGTGGGGAATGGAC+TGG + tig0021959:29839-29858 None:intergenic 65.0%
GGGGCAGTGCCTTACAGCTG+TGG + tig0021959:30275-30294 None:intergenic 65.0%
!! GTGGTGGTGGTGGGGGAGAG+TGG + tig0021959:29388-29407 None:intergenic 70.0%
GTGGGGAACGTGTGGGGGGT+AGG + tig0021959:29792-29811 None:intergenic 70.0%
CTGGGTGGGGAACGTGTGGG+GGG + tig0021959:29796-29815 None:intergenic 70.0%
!! GTGGTGGTGGTGGGGGAGAG+TGG + tig0021959:29388-29407 None:intergenic 70.0%
GTGGGGAACGTGTGGGGGGT+AGG + tig0021959:29792-29811 None:intergenic 70.0%
CTGGGTGGGGAACGTGTGGG+GGG + tig0021959:29796-29815 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0021959 gene 29041 30401 29041 ID=Msa1395690;Name=Msa1395690
tig0021959 mRNA 29041 30401 29041 ID=Msa1395690-mRNA-1;Parent=Msa1395690;Name=Msa1395690-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0.33|1|0|0|3|185|284
tig0021959 exon 29041 29315 29041 ID=Msa1395690-mRNA-1:exon:15026;Parent=Msa1395690-mRNA-1
tig0021959 exon 29604 30131 29604 ID=Msa1395690-mRNA-1:exon:15025;Parent=Msa1395690-mRNA-1
tig0021959 exon 30165 30401 30165 ID=Msa1395690-mRNA-1:exon:15024;Parent=Msa1395690-mRNA-1
tig0021959 CDS 30165 30401 30165 ID=Msa1395690-mRNA-1:cds;Parent=Msa1395690-mRNA-1
tig0021959 CDS 29604 30131 29604 ID=Msa1395690-mRNA-1:cds;Parent=Msa1395690-mRNA-1
tig0021959 CDS 29226 29315 29226 ID=Msa1395690-mRNA-1:cds;Parent=Msa1395690-mRNA-1
tig0021959 three_prime_UTR 29041 29225 29041 ID=Msa1395690-mRNA-1:three_prime_utr;Parent=Msa1395690-mRNA-1
Gene Sequence

>Msa1395690

ATGGCTCTCACTCTTGCATTAGCCATCCTCTTTTTGAGTTTCCCATCTGAAATTTCAGCAAACAAATACTCCTATTCCTCTCCACCACCACCACATTACTCATCTCCTCCACCTCCTCCAGTTCACACCTACCCTAAACCAGTTTACCACTCTCCACCACCCCCAGTTCACACCTACCCTAAACCAGTTTACCATTCTCCACCACCACCAGTTCACAAGTACCCTCACCCTAAACCATACCCTCATCCACACCCAGTCTACCATTCTCCACCACCCCCAGTTCACAAGTACCCTCATCCTCACCCTGTGTACCACTCTCCCCCACCACCACCACCAAAGAAGTCCTACAAATACCCATCTCCACCACCCCCATTCCACAAGTACCCTCACCCTCACCCTGTCTACCATTCCCCACCACCACCAACACCACACAAGAAGCCATACAAGTACCACTCTCCTCCACCCCCAGTTCACACCTACCCTAAACCAGTCTACCACTCTCCTCCACCCCCAGTTCATCACACCTACCCTAAACCAGTCTACCACTCTCCTCCACCCCCAGTTCACACCTACCCTCACCCTAAACCAGTCTACCACTCTCCACCACCACCAGTTCACACTTACCCTAAGCCAATCTACCACTCTCCTCCACCCCCAGTTCACACCTACCCTCACCCAAAACCGGTCTACCACTCTCCACCACCACCAGTTCACACCTACCCCCCACACGTTCCCCACCCAGTTTACCATTCTCCTCCTCCTCCAGATCTAAACAGAAAGTGTGAAAGCAAAGAAAGCCATGCACAAAGAAGATCAAGGGGATTCTTCACATATATTTCGTCAGCATTTGATTAA
Protein sequence

>Msa1395690

MALTLALAILFLSFPSEISANKYSYSSPPPPHYSSPPPPPVHTYPKPVYHSPPPPVHTYPKPVYHSPPPPVHKYPHPKPYPHPHPVYHSPPPPVHKYPHPHPVYHSPPPPPPKKSYKYPSPPPPFHKYPHPHPVYHSPPPPTPHKKPYKYHSPPPPVHTYPKPVYHSPPPPVHHTYPKPVYHSPPPPVHTYPHPKPVYHSPPPPVHTYPKPIYHSPPPPVHTYPHPKPVYHSPPPPVHTYPPHVPHPVYHSPPPPDLNRKCESKESHAQRRSRGFFTYISSAFD*