Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0956520 | XP_003588866.1 | 98.706 | 541 | 7 | 0 | 1 | 541 | 1 | 541 | 0.0 | 1104 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0956520 | sp|Q9M084|SYDC2_ARATH | 64.632 | 557 | 179 | 4 | 3 | 541 | 2 | 558 | 0.0 | 733 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0956520 | 0.823910 | 1.073749e-53 | -8.615850e-47 |
| Msa0086020 | Msa0956520 | 0.813317 | 2.721170e-51 | -8.615850e-47 |
| Msa0609970 | Msa0956520 | -0.841855 | 3.688717e-58 | -8.615850e-47 |
| Msa0614990 | Msa0956520 | -0.804835 | 1.785171e-49 | -8.615850e-47 |
| Msa0650620 | Msa0956520 | -0.820298 | 7.384671e-53 | -8.615850e-47 |
| Msa0817260 | Msa0956520 | -0.800909 | 1.155274e-48 | -8.615850e-47 |
| Msa0154770 | Msa0956520 | -0.807833 | 4.167287e-50 | -8.615850e-47 |
| Msa0208810 | Msa0956520 | -0.803458 | 3.452925e-49 | -8.615850e-47 |
| Msa0212750 | Msa0956520 | 0.834885 | 2.313485e-56 | -8.615850e-47 |
| Msa0223100 | Msa0956520 | -0.816379 | 5.700731e-52 | -8.615850e-47 |
| Msa0223290 | Msa0956520 | -0.821121 | 4.778851e-53 | -8.615850e-47 |
| Msa0377530 | Msa0956520 | -0.828890 | 6.989683e-55 | -8.615850e-47 |
| Msa0388040 | Msa0956520 | 0.805935 | 1.049610e-49 | -8.615850e-47 |
| Msa0403190 | Msa0956520 | -0.835465 | 1.652269e-56 | -8.615850e-47 |
| Msa0404700 | Msa0956520 | -0.813517 | 2.458864e-51 | -8.615850e-47 |
| Msa0419640 | Msa0956520 | 0.815755 | 7.856390e-52 | -8.615850e-47 |
| Msa0426810 | Msa0956520 | -0.862309 | 5.553705e-64 | -8.615850e-47 |
| Msa0462540 | Msa0956520 | -0.808491 | 3.018178e-50 | -8.615850e-47 |
| Msa0469910 | Msa0956520 | 0.832366 | 9.847614e-56 | -8.615850e-47 |
| Msa0239940 | Msa0956520 | -0.832740 | 7.953874e-56 | -8.615850e-47 |
| Msa0275400 | Msa0956520 | 0.805122 | 1.554864e-49 | -8.615850e-47 |
| Msa0302650 | Msa0956520 | -0.841215 | 5.439077e-58 | -8.615850e-47 |
| Msa0308220 | Msa0956520 | -0.840709 | 7.385185e-58 | -8.615850e-47 |
| Msa0363170 | Msa0956520 | -0.806940 | 6.442863e-50 | -8.615850e-47 |
| Msa0493920 | Msa0956520 | -0.816672 | 4.901369e-52 | -8.615850e-47 |
| Msa0505060 | Msa0956520 | -0.807534 | 4.822672e-50 | -8.615850e-47 |
| Msa0517490 | Msa0956520 | -0.817989 | 2.476538e-52 | -8.615850e-47 |
| Msa0524200 | Msa0956520 | 0.822065 | 2.890938e-53 | -8.615850e-47 |
| Msa0876860 | Msa0956520 | 0.850543 | 1.586812e-60 | -8.615850e-47 |
| Msa0891600 | Msa0956520 | 0.855005 | 8.431219e-62 | -8.615850e-47 |
| Msa0910980 | Msa0956520 | 0.828135 | 1.064013e-54 | -8.615850e-47 |
| Msa0956520 | Msa0959010 | -0.800779 | 1.227927e-48 | -8.615850e-47 |
| Msa0956520 | Msa0979120 | 0.810586 | 1.070594e-50 | -8.615850e-47 |
| Msa0956520 | Msa0992490 | 0.807313 | 5.372257e-50 | -8.615850e-47 |
| Msa0956520 | Msa1069660 | 0.800292 | 1.543544e-48 | -8.615850e-47 |
| Msa0956520 | Msa1182630 | -0.804789 | 1.824713e-49 | -8.615850e-47 |
| Msa0956520 | Msa1246530 | 0.837063 | 6.483838e-57 | -8.615850e-47 |
| Msa0956520 | Msa1252460 | 0.811516 | 6.733125e-51 | -8.615850e-47 |
| Msa0956520 | Msa1359650 | 0.804335 | 2.270093e-49 | -8.615850e-47 |
| Msa0956520 | Msa1367390 | 0.811087 | 8.341151e-51 | -8.615850e-47 |
| Msa0956520 | Msa1397050 | -0.812659 | 3.792775e-51 | -8.615850e-47 |
| Msa0956520 | Msa1398860 | -0.804816 | 1.801694e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0956520 | MtrunA17_Chr1g0150111 | 98.706 | 541 | 7 | 0 | 1 | 541 | 1 | 541 | 0.0 | 1104 |
| Msa0956520 | MtrunA17_Chr5g0410321 | 65.338 | 577 | 132 | 4 | 1 | 541 | 62 | 606 | 0.0 | 733 |
| Msa0956520 | MtrunA17_Chr8g0389541 | 30.961 | 281 | 174 | 8 | 271 | 538 | 275 | 548 | 3.90e-28 | 118 |
| Msa0956520 | MtrunA17_Chr7g0263951 | 31.560 | 282 | 173 | 10 | 271 | 538 | 325 | 600 | 2.99e-27 | 115 |
| Msa0956520 | MtrunA17_Chr2g0298001 | 23.878 | 490 | 324 | 15 | 83 | 533 | 109 | 588 | 2.94e-23 | 103 |
| Msa0956520 | MtrunA17_Chr8g0335841 | 22.691 | 498 | 295 | 18 | 90 | 533 | 111 | 572 | 4.91e-16 | 81.3 |
| Msa0956520 | MtrunA17_Chr4g0072181 | 22.899 | 345 | 230 | 10 | 209 | 520 | 32 | 373 | 2.06e-13 | 72.0 |
| Msa0956520 | MtrunA17_Chr8g0338601 | 22.846 | 267 | 189 | 8 | 278 | 534 | 367 | 626 | 1.73e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0956520 | AT4G31180.1 | 64.632 | 557 | 179 | 4 | 3 | 541 | 2 | 558 | 0.0 | 733 |
| Msa0956520 | AT4G31180.2 | 64.632 | 557 | 179 | 4 | 3 | 541 | 2 | 558 | 0.0 | 733 |
| Msa0956520 | AT4G26870.1 | 65.825 | 515 | 170 | 4 | 28 | 541 | 23 | 532 | 0.0 | 694 |
| Msa0956520 | AT5G56680.1 | 30.882 | 272 | 168 | 8 | 278 | 536 | 303 | 567 | 2.74e-29 | 122 |
| Msa0956520 | AT4G17300.2 | 25.751 | 466 | 251 | 15 | 122 | 536 | 161 | 582 | 2.90e-28 | 119 |
| Msa0956520 | AT4G17300.1 | 25.751 | 466 | 251 | 15 | 122 | 536 | 141 | 562 | 3.20e-28 | 119 |
| Msa0956520 | AT1G70980.1 | 29.304 | 273 | 173 | 7 | 278 | 536 | 300 | 566 | 3.03e-25 | 110 |
| Msa0956520 | AT3G13490.1 | 22.133 | 497 | 294 | 17 | 94 | 533 | 136 | 596 | 2.57e-17 | 85.9 |
Find 168 sgRNAs with CRISPR-Local
Find 411 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTTACATCGATTCTTTC+AGG | 0.151574 | 6_3:+63884887 | Msa0956520:CDS |
| CAGCTTTGCGGCATCCTTCT+TGG | 0.168840 | 6_3:-63881688 | None:intergenic |
| ATTCCAGCCGCTCCTATTAA+AGG | 0.200895 | 6_3:+63882089 | Msa0956520:CDS |
| CAAACAAATTAACACCTTTA+GGG | 0.270476 | 6_3:-63883328 | None:intergenic |
| ATGTCAATATGTGGTGATTT+TGG | 0.279212 | 6_3:+63882994 | Msa0956520:CDS |
| TTCTTAGTCATCAGAGAAAA+TGG | 0.279492 | 6_3:+63881951 | Msa0956520:CDS |
| CGGAAAATTCCTTGATTTGC+TGG | 0.282793 | 6_3:-63882653 | None:intergenic |
| TCAAAAGAGTTACTGTAGTT+TGG | 0.284688 | 6_3:-63884577 | None:intergenic |
| GATCCCCTTGCTGTCAATTA+TGG | 0.290000 | 6_3:+63881777 | Msa0956520:CDS |
| TATGTAAGCCGCAGAGTATT+TGG | 0.299031 | 6_3:-63883512 | None:intergenic |
| TGAAATTGAGAAGGCCATTC+AGG | 0.299926 | 6_3:+63882344 | Msa0956520:CDS |
| CACTGTACAGTGCTTGGTTC+AGG | 0.307814 | 6_3:+63881977 | Msa0956520:CDS |
| TGTTGTGAGGCACCTTTAAT+AGG | 0.308209 | 6_3:-63882101 | None:intergenic |
| AGGCATCTGTGCGAGTTTAC+AGG | 0.319353 | 6_3:+63883069 | Msa0956520:CDS |
| AAGTAAGTCCAAGGCATTAT+TGG | 0.332543 | 6_3:-63885261 | None:intergenic |
| CAAAAGAGTTACTGTAGTTT+GGG | 0.335107 | 6_3:-63884576 | None:intergenic |
| TTTCTATCCTGAGTTTGGGC+TGG | 0.346815 | 6_3:+63879197 | None:intergenic |
| TGGCGTCAAGCTACACCTTC+AGG | 0.350829 | 6_3:-63885241 | None:intergenic |
| AATTGTTTATAAGGCAGATT+GGG | 0.354080 | 6_3:-63885680 | None:intergenic |
| CACAATACAGTTTCCTCACT+TGG | 0.354867 | 6_3:-63882263 | None:intergenic |
| CATGATGGTATGAAATTGTT+TGG | 0.357276 | 6_3:+63885627 | Msa0956520:three_prime_UTR |
| CAGAAGATTCCTTTACTCAT+AGG | 0.359787 | 6_3:+63883049 | Msa0956520:CDS |
| CACACTCCTAAGTTGATTGC+TGG | 0.375345 | 6_3:+63882883 | Msa0956520:CDS |
| GTCCAGTCGTTGACATTGAC+AGG | 0.393463 | 6_3:-63881834 | None:intergenic |
| TAGCAAGGCATTGTATAAAA+TGG | 0.394303 | 6_3:-63884547 | None:intergenic |
| AGGTGGCGGCGGCAACTTCT+CGG | 0.397158 | 6_3:-63881725 | None:intergenic |
| GTACCACCACACGGTGGCTT+TGG | 0.402704 | 6_3:+63885060 | Msa0956520:CDS |
| TTCTATCCTGAGTTTGGGCT+GGG | 0.403019 | 6_3:+63879198 | None:intergenic |
| GAATTGTTTATAAGGCAGAT+TGG | 0.409095 | 6_3:-63885681 | None:intergenic |
| ACAACTTGTTCGTGTGAATC+AGG | 0.411639 | 6_3:+63882592 | Msa0956520:CDS |
| CAAAGGGCAACCTGCATGCC+TGG | 0.419819 | 6_3:+63882945 | Msa0956520:CDS |
| TACAGGTCTTGATGTTGAAA+TGG | 0.423398 | 6_3:+63883086 | Msa0956520:CDS |
| CAAGAAGGATGCCGCAAAGC+TGG | 0.423709 | 6_3:+63881689 | Msa0956520:CDS |
| AGGGTGGAGCTGCTGTCTTT+AGG | 0.428133 | 6_3:+63882914 | Msa0956520:CDS |
| CTTTGCGGCATCCTTCTTGG+AGG | 0.431699 | 6_3:-63881685 | None:intergenic |
| ATGTGATTGAGTGATAAATA+TGG | 0.439555 | 6_3:+63885499 | Msa0956520:three_prime_UTR |
| GGAGTAGAGATTGAACCTTT+TGG | 0.442706 | 6_3:+63884327 | Msa0956520:CDS |
| CATTGACAGGGGTCTTCGAT+TGG | 0.443151 | 6_3:-63881821 | None:intergenic |
| AACACCTTTAGGGGTTCAAA+CGG | 0.444877 | 6_3:-63883318 | None:intergenic |
| ATCTGCGGACTCACTAAATC+AGG | 0.450583 | 6_3:-63882005 | None:intergenic |
| CTTGATTTGCTGGTGTTCGC+AGG | 0.452358 | 6_3:-63882643 | None:intergenic |
| AACGCCATCTTCTTCCCAAC+TGG | 0.452718 | 6_3:-63881930 | None:intergenic |
| GCCCTCCCACGGATTAGAAC+CGG | 0.456675 | 6_3:-63881894 | None:intergenic |
| GCAGCATCCTCGATATTAAT+CGG | 0.461821 | 6_3:-63882309 | None:intergenic |
| TGGAGCTGCTGTCTTTAGGC+TGG | 0.464922 | 6_3:+63882918 | Msa0956520:CDS |
| GATTAAGAAACATTATTATG+AGG | 0.466183 | 6_3:+63883110 | Msa0956520:CDS |
| TTACATTTCCAACTTGAGAC+TGG | 0.472065 | 6_3:-63882679 | None:intergenic |
| CAACAGAGAAAACGAGAAAG+AGG | 0.472805 | 6_3:-63879274 | None:intergenic |
| TATTAAAGGTGCCTCACAAC+AGG | 0.473545 | 6_3:+63882103 | Msa0956520:CDS |
| AAGAGCGTGAGGGTAAAATA+AGG | 0.486098 | 6_3:-63879246 | None:intergenic |
| AAATAAGGATTCAGCGGGAT+AGG | 0.487687 | 6_3:-63879231 | None:intergenic |
| CGGTGGCTTTGGAGTAGGCT+TGG | 0.490259 | 6_3:+63885071 | Msa0956520:CDS |
| TTAGGCGAGGAGATAATATC+AGG | 0.491304 | 6_3:+63884790 | Msa0956520:intron |
| AAGAGGAGTGGAAGAGCGTG+AGG | 0.496414 | 6_3:-63879257 | None:intergenic |
| TGAGGCTCTCAATGATTCAC+TGG | 0.499024 | 6_3:+63881863 | Msa0956520:CDS |
| AAAATGGTCTTACAGCCAAC+GGG | 0.502027 | 6_3:-63884531 | None:intergenic |
| TGGTTTCACTGTACAGTGCT+TGG | 0.502724 | 6_3:+63881971 | Msa0956520:CDS |
| GTCTTACAGCCAACGGGTAC+CGG | 0.506627 | 6_3:-63884525 | None:intergenic |
| TCAGTATTCAAGTCACCAAA+AGG | 0.506705 | 6_3:-63884342 | None:intergenic |
| TTACCACACCCACTTTGAAA+AGG | 0.509095 | 6_3:+63885451 | Msa0956520:three_prime_UTR |
| CTAGATCCAGCAATCAACTT+AGG | 0.510006 | 6_3:-63882889 | None:intergenic |
| TTTCACCGTCAACTTGGAGC+TGG | 0.511610 | 6_3:+63885331 | Msa0956520:three_prime_UTR |
| TTTAATAGGAGCGGCTGGAA+TGG | 0.513685 | 6_3:-63882087 | None:intergenic |
| GAGTCTATTGTCGATGTCGA+AGG | 0.513770 | 6_3:+63882056 | Msa0956520:CDS |
| GCACCTTTAATAGGAGCGGC+TGG | 0.516328 | 6_3:-63882092 | None:intergenic |
| CACAAGCTATTCGACCAGTT+GGG | 0.517268 | 6_3:+63881916 | Msa0956520:CDS |
| GCACAAGCTATTCGACCAGT+TGG | 0.517849 | 6_3:+63881915 | Msa0956520:CDS |
| TTCTTCTCTACGATTCATCA+AGG | 0.519364 | 6_3:+63879309 | Msa0956520:five_prime_UTR |
| TATGAAGCGGGGACTACAGC+AGG | 0.519585 | 6_3:-63885405 | None:intergenic |
| AAACACCAGCTCCAAGTTGA+CGG | 0.522048 | 6_3:-63885336 | None:intergenic |
| ACACCTTTAGGGGTTCAAAC+GGG | 0.524064 | 6_3:-63883317 | None:intergenic |
| CAGCCAACGGGTACCGGTGA+AGG | 0.524085 | 6_3:-63884519 | None:intergenic |
| CTGCGGCTTACATATGAAGA+AGG | 0.526092 | 6_3:+63883521 | Msa0956520:CDS |
| CATGCAGTTCTATATGAAGC+GGG | 0.529598 | 6_3:-63885417 | None:intergenic |
| AATGAATATATATACCTGAA+TGG | 0.529761 | 6_3:-63882358 | None:intergenic |
| GAAACTGTATTGTGTGAGTA+AGG | 0.532678 | 6_3:+63882272 | Msa0956520:CDS |
| AAACAAATTAACACCTTTAG+GGG | 0.533347 | 6_3:-63883327 | None:intergenic |
| GAATAGCTTGTGCCCTCCCA+CGG | 0.535699 | 6_3:-63881905 | None:intergenic |
| TTCCGCATCCAGTCTCAAGT+TGG | 0.536075 | 6_3:+63882671 | Msa0956520:CDS |
| CTGCGAACACCAGCAAATCA+AGG | 0.537117 | 6_3:+63882644 | Msa0956520:CDS |
| GAAGTTGAGGTGACTGAGCC+AGG | 0.538658 | 6_3:-63882963 | None:intergenic |
| AGAAAGGAAACTAGGCCAGC+TGG | 0.539715 | 6_3:+63884368 | Msa0956520:CDS |
| TCTTTAGGCTGGACTACAAA+GGG | 0.542694 | 6_3:+63882929 | Msa0956520:CDS |
| CGATGTAGCAGAGGTGGCGG+CGG | 0.543849 | 6_3:-63881736 | None:intergenic |
| CCACACGGTGGCTTTGGAGT+AGG | 0.547341 | 6_3:+63885066 | Msa0956520:CDS |
| AACAAGCCGGTTCTAATCCG+TGG | 0.547533 | 6_3:+63881888 | Msa0956520:CDS |
| TTTGAACACAAAATGTAAGA+AGG | 0.547679 | 6_3:+63883269 | Msa0956520:CDS |
| GCTTGACGCCAATAATGCCT+TGG | 0.549853 | 6_3:+63885253 | Msa0956520:three_prime_UTR |
| CCCCTGTCAATGTCAACGAC+TGG | 0.551263 | 6_3:+63881832 | Msa0956520:CDS |
| TAAAATGGTCTTACAGCCAA+CGG | 0.552316 | 6_3:-63884532 | None:intergenic |
| TCGATATTAATCGGCAGAGT+AGG | 0.553228 | 6_3:-63882300 | None:intergenic |
| GGTGACTGAGCCAGGCATGC+AGG | 0.555621 | 6_3:-63882955 | None:intergenic |
| TCGATTGGAGCTCAATGAGC+GGG | 0.557785 | 6_3:-63881806 | None:intergenic |
| GACATTTGCTTGTGAAGTTG+AGG | 0.558674 | 6_3:-63882976 | None:intergenic |
| GCACAGATGCCTATGAGTAA+AGG | 0.560403 | 6_3:-63883058 | None:intergenic |
| CACAAGCAAATGTCAATATG+TGG | 0.561198 | 6_3:+63882985 | Msa0956520:CDS |
| TTCCAACTTGAGACTGGATG+CGG | 0.563223 | 6_3:-63882673 | None:intergenic |
| AAATGCTAATAACATCATCA+TGG | 0.570368 | 6_3:-63885174 | None:intergenic |
| AGTCGATGTAGCAGAGGTGG+CGG | 0.572655 | 6_3:-63881739 | None:intergenic |
| GGGTAAAATAAGGATTCAGC+GGG | 0.572750 | 6_3:-63879236 | None:intergenic |
| CAGAGTTCTATATCCTTCAC+CGG | 0.573477 | 6_3:+63884506 | Msa0956520:CDS |
| ATTAATCGGCAGAGTAGGAA+TGG | 0.575600 | 6_3:-63882295 | None:intergenic |
| TAGTTTGGGTTGTCATAGCA+AGG | 0.575643 | 6_3:-63884562 | None:intergenic |
| GAAGAACGTGCACAAGCTTG+CGG | 0.577219 | 6_3:+63884844 | Msa0956520:CDS |
| TTTATCCACGTGACCCACTC+AGG | 0.577438 | 6_3:+63885145 | Msa0956520:CDS |
| CACATTCAACTGAAGCCTGA+AGG | 0.578547 | 6_3:+63885226 | Msa0956520:three_prime_UTR |
| GTCTTTAGGCTGGACTACAA+AGG | 0.579932 | 6_3:+63882928 | Msa0956520:CDS |
| TCGACCAGTTGGGAAGAAGA+TGG | 0.581394 | 6_3:+63881926 | Msa0956520:CDS |
| AGACTCACGGCTGAGAGCGG+CGG | 0.581736 | 6_3:-63882039 | None:intergenic |
| TGCACAAGCTTGCGGCATTG+AGG | 0.583418 | 6_3:+63884852 | Msa0956520:CDS |
| AATCATTGAGAGCCTCAACT+CGG | 0.583678 | 6_3:-63881857 | None:intergenic |
| ACTGAAGCAGAAAGGAAACT+AGG | 0.584857 | 6_3:+63884360 | Msa0956520:CDS |
| GAGAGTCGATGTAGCAGAGG+TGG | 0.585897 | 6_3:-63881742 | None:intergenic |
| AGAGGAGTGGAAGAGCGTGA+GGG | 0.588493 | 6_3:-63879256 | None:intergenic |
| TACTCTGCCGATTAATATCG+AGG | 0.589627 | 6_3:+63882302 | Msa0956520:CDS |
| TCCAGTCGTTGACATTGACA+GGG | 0.592334 | 6_3:-63881833 | None:intergenic |
| AGAGAGAGTCGATGTAGCAG+AGG | 0.593608 | 6_3:-63881745 | None:intergenic |
| ACTTGAATACTGAAGCAGAA+AGG | 0.595013 | 6_3:+63884352 | Msa0956520:CDS |
| TGATTTAGTGAGTCCGCAGA+TGG | 0.596877 | 6_3:+63882007 | Msa0956520:CDS |
| GTACCCGTTTGAACCCCTAA+AGG | 0.597654 | 6_3:+63883314 | Msa0956520:CDS |
| ATCATTGAGAGCCTCAACTC+GGG | 0.599803 | 6_3:-63881856 | None:intergenic |
| CAACGACTGGACCCGAGTTG+AGG | 0.600329 | 6_3:+63881845 | Msa0956520:CDS |
| TCAAGAGCCGACACTGTCAT+CGG | 0.603493 | 6_3:+63881635 | Msa0956520:CDS |
| GATCCTTCCGATGACAGTGT+CGG | 0.605021 | 6_3:-63881642 | None:intergenic |
| TGAGGCACCTTTAATAGGAG+CGG | 0.608618 | 6_3:-63882096 | None:intergenic |
| TATCCTTCACCGGTACCCGT+TGG | 0.609544 | 6_3:+63884516 | Msa0956520:CDS |
| GCCGGTTCTAATCCGTGGGA+GGG | 0.610769 | 6_3:+63881893 | Msa0956520:CDS |
| TTCGATTGGAGCTCAATGAG+CGG | 0.611035 | 6_3:-63881807 | None:intergenic |
| CAGCAATCAACTTAGGAGTG+TGG | 0.611888 | 6_3:-63882882 | None:intergenic |
| TGATTCACTGGAGAACAAGC+CGG | 0.613416 | 6_3:+63881875 | Msa0956520:CDS |
| GCGGCAAATTTCACCATCTG+CGG | 0.614321 | 6_3:-63882020 | None:intergenic |
| ATTGCTGGATCTAGTGAGGG+TGG | 0.614640 | 6_3:+63882898 | Msa0956520:CDS |
| ATACCATAATTGACAGCAAG+GGG | 0.614733 | 6_3:-63881780 | None:intergenic |
| ACAAGCCGGTTCTAATCCGT+GGG | 0.615482 | 6_3:+63881889 | Msa0956520:CDS |
| TATTGTCGATGTCGAAGGTG+TGG | 0.616371 | 6_3:+63882061 | Msa0956520:CDS |
| TCAGGCTTCAGTTGAATGTG+AGG | 0.617159 | 6_3:-63885223 | None:intergenic |
| GAGAAAACGAGAAAGAGGAG+TGG | 0.619349 | 6_3:-63879269 | None:intergenic |
| ATCATGGTGCAATCCTGAGT+GGG | 0.620490 | 6_3:-63885158 | None:intergenic |
| GCATGCAGTTCTATATGAAG+CGG | 0.621106 | 6_3:-63885418 | None:intergenic |
| AATAGACTCACGGCTGAGAG+CGG | 0.623488 | 6_3:-63882042 | None:intergenic |
| AGCCGGTTCTAATCCGTGGG+AGG | 0.623958 | 6_3:+63881892 | Msa0956520:CDS |
| AAGTGAAGTTGAAATTGAGA+AGG | 0.624126 | 6_3:+63882335 | Msa0956520:CDS |
| GAGCCGACACTGTCATCGGA+AGG | 0.625324 | 6_3:+63881639 | Msa0956520:CDS |
| TGTTTGGAAAAGTAAGTCCA+AGG | 0.629031 | 6_3:-63885270 | None:intergenic |
| TAAGAAGGATCTCGAAGCTG+TGG | 0.629352 | 6_3:+63883284 | Msa0956520:CDS |
| GTTGATTGCTGGATCTAGTG+AGG | 0.632210 | 6_3:+63882894 | Msa0956520:CDS |
| CAATACCATAATTGACAGCA+AGG | 0.634292 | 6_3:-63881782 | None:intergenic |
| CGTGTAGTAATGCTCTTCTG+TGG | 0.635161 | 6_3:+63885096 | Msa0956520:CDS |
| ATCATAACCAACCTGTTGTG+AGG | 0.639858 | 6_3:-63882114 | None:intergenic |
| AGAAGGTATTCAGATGCTCA+AGG | 0.641602 | 6_3:+63883538 | Msa0956520:CDS |
| ATTGTTTATAAGGCAGATTG+GGG | 0.642473 | 6_3:-63885679 | None:intergenic |
| TTGATTGCTGGATCTAGTGA+GGG | 0.644845 | 6_3:+63882895 | Msa0956520:CDS |
| ACTCCAAAGCCACCGTGTGG+TGG | 0.646949 | 6_3:-63885063 | None:intergenic |
| ACACTATTAAAATAGTGCTG+TGG | 0.647523 | 6_3:+63885290 | Msa0956520:three_prime_UTR |
| AGGGTAAAATAAGGATTCAG+CGG | 0.649751 | 6_3:-63879237 | None:intergenic |
| CATCATGGTGCAATCCTGAG+TGG | 0.650761 | 6_3:-63885159 | None:intergenic |
| CGACATCGACAATAGACTCA+CGG | 0.651944 | 6_3:-63882052 | None:intergenic |
| GAATCTTCTGCTCTAAACAC+AGG | 0.652142 | 6_3:-63883036 | None:intergenic |
| AGATATGGTGTACCACCACA+CGG | 0.671410 | 6_3:+63885051 | Msa0956520:intron |
| TATAGGTTGAAATCCAAGTG+AGG | 0.674003 | 6_3:+63882250 | Msa0956520:intron |
| GCAATCCTGAGTGGGTCACG+TGG | 0.689157 | 6_3:-63885150 | None:intergenic |
| AATACCATAATTGACAGCAA+GGG | 0.690003 | 6_3:-63881781 | None:intergenic |
| ATGCAGTTCTATATGAAGCG+GGG | 0.701942 | 6_3:-63885416 | None:intergenic |
| TGGCGGCGGCAACTTCTCGG+CGG | 0.706873 | 6_3:-63881722 | None:intergenic |
| CCTACTCCAAAGCCACCGTG+TGG | 0.729566 | 6_3:-63885066 | None:intergenic |
| CCAGTCGTTGACATTGACAG+GGG | 0.731951 | 6_3:-63881832 | None:intergenic |
| AGTATCTTCCAAATACTCTG+CGG | 0.740430 | 6_3:+63883504 | Msa0956520:intron |
| TATGGTGTACCACCACACGG+TGG | 0.820152 | 6_3:+63885054 | Msa0956520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAAAAAAAAAAAAA+TGG | - | chr6_3:63879488-63879507 | None:intergenic | 0.0% |
| !!! | TGATTTTTTTTTTTTTGTTA+AGG | + | chr6_3:63879595-63879614 | Msa0956520:intron | 10.0% |
| !! | TTTGTTAAGAATGAATAATA+TGG | - | chr6_3:63879667-63879686 | None:intergenic | 15.0% |
| !!! | TTTTTATCAATTCTATTCAA+TGG | - | chr6_3:63879798-63879817 | None:intergenic | 15.0% |
| !! | TAAATTTAATGTAATGACTT+TGG | + | chr6_3:63880931-63880950 | Msa0956520:intron | 15.0% |
| !!! | TTTGATTGAAAATTTTACAA+TGG | + | chr6_3:63881038-63881057 | Msa0956520:intron | 15.0% |
| !! | ATTCTTAAAGAATCTAAAAA+TGG | - | chr6_3:63881102-63881121 | None:intergenic | 15.0% |
| !!! | GAGTTTAATTTTATCATATA+TGG | - | chr6_3:63881524-63881543 | None:intergenic | 15.0% |
| !!! | GATTTTGATTTTGATTATAA+TGG | + | chr6_3:63882207-63882226 | Msa0956520:intron | 15.0% |
| !! | ATTATATAAATGTCATTGAA+AGG | + | chr6_3:63883822-63883841 | Msa0956520:intron | 15.0% |
| !! | TTTCTTGAATTAAATTGAAA+AGG | - | chr6_3:63884045-63884064 | None:intergenic | 15.0% |
| !! | TTTCAATTTAATTCAAGAAA+AGG | + | chr6_3:63884045-63884064 | Msa0956520:intron | 15.0% |
| !! | TCTTAGATAAAAATTAGAAA+GGG | - | chr6_3:63885526-63885545 | None:intergenic | 15.0% |
| !! | TTCTTAGATAAAAATTAGAA+AGG | - | chr6_3:63885527-63885546 | None:intergenic | 15.0% |
| !! | AAGAACAAGAAATTGAATAA+AGG | - | chr6_3:63879531-63879550 | None:intergenic | 20.0% |
| !!! | TTTCTTGTTCTTTTTGAATT+TGG | + | chr6_3:63879539-63879558 | Msa0956520:intron | 20.0% |
| !! | TAATATGGAATGTAAATTTG+TGG | - | chr6_3:63879652-63879671 | None:intergenic | 20.0% |
| !! | TTGTTCTCTTAATATGAAAA+CGG | + | chr6_3:63879861-63879880 | Msa0956520:intron | 20.0% |
| !!! | TCAATACATGTTTCTTTTAT+AGG | + | chr6_3:63880055-63880074 | Msa0956520:intron | 20.0% |
| !! | CGTGATGTTATATATAATAT+TGG | + | chr6_3:63880112-63880131 | Msa0956520:intron | 20.0% |
| !! | TTCTTGAAGAAACTAAAAAT+TGG | - | chr6_3:63880831-63880850 | None:intergenic | 20.0% |
| !!! | GTTGTATTTTTTCGTTTATT+GGG | + | chr6_3:63880953-63880972 | Msa0956520:intron | 20.0% |
| !! | TTTGAAGAAAAAAAATGCAA+TGG | + | chr6_3:63881352-63881371 | Msa0956520:intron | 20.0% |
| !! | TTGAAGAAAAAAAATGCAAT+GGG | + | chr6_3:63881353-63881372 | Msa0956520:intron | 20.0% |
| !! | TAAGTACTTGAAAATTTACT+TGG | + | chr6_3:63881396-63881415 | Msa0956520:intron | 20.0% |
| !!! | ATTAAGTTGAGATCAATTTT+TGG | + | chr6_3:63881423-63881442 | Msa0956520:intron | 20.0% |
| !! | AATGAATATATATACCTGAA+TGG | - | chr6_3:63882361-63882380 | None:intergenic | 20.0% |
| !! | TCAATTACAACATTTCTAAT+CGG | - | chr6_3:63882385-63882404 | None:intergenic | 20.0% |
| !!! | TGTTGTTTTGTTTAATATAC+TGG | + | chr6_3:63882511-63882530 | Msa0956520:intron | 20.0% |
| !! | AGAATAATAGTAGAGAAAAT+AGG | - | chr6_3:63882707-63882726 | None:intergenic | 20.0% |
| !!! | CATTTCTTAAGTTAGTTTAT+CGG | - | chr6_3:63882791-63882810 | None:intergenic | 20.0% |
| !! | GATTAAGAAACATTATTATG+AGG | + | chr6_3:63883110-63883129 | Msa0956520:CDS | 20.0% |
| !!! | TCAATTTATTTGTTTTGTAG+TGG | + | chr6_3:63883388-63883407 | Msa0956520:intron | 20.0% |
| !!! | CAATTTATTTGTTTTGTAGT+GGG | + | chr6_3:63883389-63883408 | Msa0956520:intron | 20.0% |
| !!! | TCAATTTTACAAAATAGACA+GGG | - | chr6_3:63883665-63883684 | None:intergenic | 20.0% |
| !!! | TCTATTTTGTAAAATTGAGA+GGG | + | chr6_3:63883667-63883686 | Msa0956520:intron | 20.0% |
| !! | TTTAAACTTTACAACAAGAT+TGG | - | chr6_3:63883772-63883791 | None:intergenic | 20.0% |
| !! | TAAATTGATGAAAATGTACT+TGG | + | chr6_3:63883863-63883882 | Msa0956520:intron | 20.0% |
| !! | AAATTGATGAAAATGTACTT+GGG | + | chr6_3:63883864-63883883 | Msa0956520:intron | 20.0% |
| !! | AATAGTTACAATTATTTGGT+TGG | - | chr6_3:63884016-63884035 | None:intergenic | 20.0% |
| !! | AACCAAATAATTGTAACTAT+TGG | + | chr6_3:63884015-63884034 | Msa0956520:intron | 20.0% |
| !! | ACCAAATAATTGTAACTATT+GGG | + | chr6_3:63884016-63884035 | Msa0956520:intron | 20.0% |
| !! | ACTGTAACTATGATATATAT+AGG | + | chr6_3:63884228-63884247 | Msa0956520:intron | 20.0% |
| !! | TAACTATGATATATATAGGA+TGG | + | chr6_3:63884232-63884251 | Msa0956520:intron | 20.0% |
| !! | TGTAATTCTATTTATAGGTA+TGG | + | chr6_3:63884481-63884500 | Msa0956520:intron | 20.0% |
| !!! | TCTGGTTATAATGATTTTAT+GGG | + | chr6_3:63884985-63885004 | Msa0956520:intron | 20.0% |
| !! | AATACTGAATAGACAAAAAA+TGG | - | chr6_3:63885478-63885497 | None:intergenic | 20.0% |
| !! | CTTAGATAAAAATTAGAAAG+GGG | - | chr6_3:63885525-63885544 | None:intergenic | 20.0% |
| !!! | GAATACTTTTTAAGATCTTT+TGG | + | chr6_3:63885577-63885596 | Msa0956520:three_prime_UTR | 20.0% |
| ! | TTAGGGAAAATATAAAAGGA+CGG | - | chr6_3:63879354-63879373 | None:intergenic | 25.0% |
| ! | AGGATTAGGGAAAATATAAA+AGG | - | chr6_3:63879358-63879377 | None:intergenic | 25.0% |
| !! | TTTTCTCTCTCTTTCATATT+TGG | + | chr6_3:63879442-63879461 | Msa0956520:intron | 25.0% |
| ! | TAATTAGTGATTACTCTCTA+TGG | + | chr6_3:63879896-63879915 | Msa0956520:intron | 25.0% |
| !!! | CTAATTCAATTGTGTTTTGA+TGG | + | chr6_3:63879937-63879956 | Msa0956520:intron | 25.0% |
| !! | AGATCTTTTCGTTTATTATG+TGG | + | chr6_3:63880329-63880348 | Msa0956520:intron | 25.0% |
| !!! | AATAAGTATTGAAGAACAAC+TGG | + | chr6_3:63880391-63880410 | Msa0956520:intron | 25.0% |
| !!! | GGTTGTATTTTTTCGTTTAT+TGG | + | chr6_3:63880952-63880971 | Msa0956520:intron | 25.0% |
| ! | CTTAAAGAATCTAAAAATGG+AGG | - | chr6_3:63881099-63881118 | None:intergenic | 25.0% |
| !! | GGTATTTGTTAAAAGGATTT+AGG | + | chr6_3:63881211-63881230 | Msa0956520:intron | 25.0% |
| !! | GTTGTATTTGTTAGCTTAAT+GGG | + | chr6_3:63881233-63881252 | Msa0956520:intron | 25.0% |
| !! | AAAATTTTACACTGATGTTG+TGG | + | chr6_3:63881328-63881347 | Msa0956520:intron | 25.0% |
| ! | TGAAGAAAAAAAATGCAATG+GGG | + | chr6_3:63881354-63881373 | Msa0956520:intron | 25.0% |
| ! | TTGGTACTAATGTAATTTGA+TGG | + | chr6_3:63881442-63881461 | Msa0956520:intron | 25.0% |
| !! | GATTATCTAACCATCATTTT+TGG | + | chr6_3:63881468-63881487 | Msa0956520:intron | 25.0% |
| ! | ATGATTAGTACCAAAAATGA+TGG | - | chr6_3:63881481-63881500 | None:intergenic | 25.0% |
| ! | ATCAGAAACAAAAAGCAAAA+AGG | + | chr6_3:63881662-63881681 | Msa0956520:CDS | 25.0% |
| !! | GTTATGATATCTTGTTACTT+AGG | + | chr6_3:63882129-63882148 | Msa0956520:intron | 25.0% |
| !!! | TTGATTATAATGGTGTTATG+TGG | + | chr6_3:63882217-63882236 | Msa0956520:intron | 25.0% |
| !! | AACTTAAGAAATGCATTTTG+CGG | + | chr6_3:63882798-63882817 | Msa0956520:intron | 25.0% |
| ! | ACATTATTATGAGGTACATT+TGG | + | chr6_3:63883119-63883138 | Msa0956520:intron | 25.0% |
| ! | TTTGAACACAAAATGTAAGA+AGG | + | chr6_3:63883269-63883288 | Msa0956520:CDS | 25.0% |
| ! | AAACAAATTAACACCTTTAG+GGG | - | chr6_3:63883330-63883349 | None:intergenic | 25.0% |
| ! | CAAACAAATTAACACCTTTA+GGG | - | chr6_3:63883331-63883350 | None:intergenic | 25.0% |
| !!! | CTAAAGGTGTTAATTTGTTT+GGG | + | chr6_3:63883330-63883349 | Msa0956520:intron | 25.0% |
| ! | GATAAACAAACAAATGTGAT+AGG | + | chr6_3:63883602-63883621 | Msa0956520:intron | 25.0% |
| !! | CTCAATTTTACAAAATAGAC+AGG | - | chr6_3:63883666-63883685 | None:intergenic | 25.0% |
| !! | GTCTATTTTGTAAAATTGAG+AGG | + | chr6_3:63883666-63883685 | Msa0956520:intron | 25.0% |
| !! | CTATTTTGTAAAATTGAGAG+GGG | + | chr6_3:63883668-63883687 | Msa0956520:intron | 25.0% |
| ! | TATAAGATTAAACTGTACAC+AGG | - | chr6_3:63883722-63883741 | None:intergenic | 25.0% |
| !! | CTAAATGAGATCTCATTTTA+TGG | - | chr6_3:63883928-63883947 | None:intergenic | 25.0% |
| ! | TTTAGTCATTTCATTGATGA+TGG | + | chr6_3:63883943-63883962 | Msa0956520:intron | 25.0% |
| !! | TGGAATTTTCAAAAATTGGA+GGG | - | chr6_3:63883996-63884015 | None:intergenic | 25.0% |
| !! | TTGGAATTTTCAAAAATTGG+AGG | - | chr6_3:63883997-63884016 | None:intergenic | 25.0% |
| !! | TGGTTGGAATTTTCAAAAAT+TGG | - | chr6_3:63884000-63884019 | None:intergenic | 25.0% |
| ! | CCAAATAATTGTAACTATTG+GGG | + | chr6_3:63884017-63884036 | Msa0956520:intron | 25.0% |
| ! | AAAGGACATAGTTATTTGAT+TGG | + | chr6_3:63884063-63884082 | Msa0956520:intron | 25.0% |
| !!! | TTTCCTCTTTTAGTTAGTTT+TGG | + | chr6_3:63884147-63884166 | Msa0956520:intron | 25.0% |
| !!! | TTCCTCTTTTAGTTAGTTTT+GGG | + | chr6_3:63884148-63884167 | Msa0956520:intron | 25.0% |
| !! | GTTATAAAAGATTTGAGACA+GGG | - | chr6_3:63884410-63884429 | None:intergenic | 25.0% |
| !! | AGTTATAAAAGATTTGAGAC+AGG | - | chr6_3:63884411-63884430 | None:intergenic | 25.0% |
| ! | TCGACTGTAATTCTATTTAT+AGG | + | chr6_3:63884476-63884495 | Msa0956520:intron | 25.0% |
| !! | AATGCTTTGTTATGACAATT+TGG | + | chr6_3:63884646-63884665 | Msa0956520:intron | 25.0% |
| ! | GTTCAATGTCTTTGTTAATA+CGG | + | chr6_3:63884935-63884954 | Msa0956520:intron | 25.0% |
| ! | TTCAATGTCTTTGTTAATAC+GGG | + | chr6_3:63884936-63884955 | Msa0956520:intron | 25.0% |
| !! | CTCTGGTTATAATGATTTTA+TGG | + | chr6_3:63884984-63885003 | Msa0956520:intron | 25.0% |
| !! | CTGGTTATAATGATTTTATG+GGG | + | chr6_3:63884986-63885005 | Msa0956520:intron | 25.0% |
| !!! | TGATCAATCATTTAGTTTTC+TGG | - | chr6_3:63885026-63885045 | None:intergenic | 25.0% |
| ! | TGATTGATCATTTACAGATA+TGG | + | chr6_3:63885036-63885055 | Msa0956520:intron | 25.0% |
| ! | AAATGCTAATAACATCATCA+TGG | - | chr6_3:63885177-63885196 | None:intergenic | 25.0% |
| !!! | AGCACTATTTTAATAGTGTT+TGG | - | chr6_3:63885289-63885308 | None:intergenic | 25.0% |
| ! | ATGTGATTGAGTGATAAATA+TGG | + | chr6_3:63885499-63885518 | Msa0956520:three_prime_UTR | 25.0% |
| !! | GTTTTTACTTATGTACATGA+TGG | + | chr6_3:63885612-63885631 | Msa0956520:three_prime_UTR | 25.0% |
| ! | GAATCGTAGAGAAGAATTTT+AGG | - | chr6_3:63879305-63879324 | None:intergenic | 30.0% |
| ! | AATTTCAAGCTTTTACACCA+TGG | + | chr6_3:63879416-63879435 | Msa0956520:intron | 30.0% |
| AAAGAGAGAGAAAAATTCCA+TGG | - | chr6_3:63879436-63879455 | None:intergenic | 30.0% | |
| TATGGAATGTAAATTTGTGG+AGG | - | chr6_3:63879649-63879668 | None:intergenic | 30.0% | |
| TCCTGAAATATAATTCCTCT+TGG | - | chr6_3:63879709-63879728 | None:intergenic | 30.0% | |
| !! | GATAAAAAGTACTCTCTATG+TGG | + | chr6_3:63879810-63879829 | Msa0956520:intron | 30.0% |
| ! | TGGACAATTGTTTCTTTCTT+TGG | + | chr6_3:63879830-63879849 | Msa0956520:intron | 30.0% |
| TACTCTCTATGGACAATTAT+TGG | + | chr6_3:63879907-63879926 | Msa0956520:intron | 30.0% | |
| !! | GTTTTGATGGAAGAAAAAAG+AGG | + | chr6_3:63879950-63879969 | Msa0956520:intron | 30.0% |
| TTATGAGTCATTCTTCGATA+TGG | + | chr6_3:63880183-63880202 | Msa0956520:intron | 30.0% | |
| ! | CATTCTAAGAATCGTGTTAT+TGG | + | chr6_3:63880440-63880459 | Msa0956520:intron | 30.0% |
| AAAACATTTCGACATACTCA+GGG | - | chr6_3:63880542-63880561 | None:intergenic | 30.0% | |
| AAAAACATTTCGACATACTC+AGG | - | chr6_3:63880543-63880562 | None:intergenic | 30.0% | |
| ! | AAATTGGTTTCTACCAATAG+AGG | - | chr6_3:63880815-63880834 | None:intergenic | 30.0% |
| ACATTTATCAAACACCTAGT+AGG | - | chr6_3:63880982-63881001 | None:intergenic | 30.0% | |
| TGTTTGATAAATGTCCTAAG+TGG | + | chr6_3:63880988-63881007 | Msa0956520:intron | 30.0% | |
| AAATTCAAAGAACACCACTT+AGG | - | chr6_3:63881005-63881024 | None:intergenic | 30.0% | |
| TACCATTAGAGCACAAAAAA+CGG | - | chr6_3:63881128-63881147 | None:intergenic | 30.0% | |
| ! | TGAATCTTGTTTCTTGAGTT+TGG | + | chr6_3:63881159-63881178 | Msa0956520:intron | 30.0% |
| ! | GGTTGTATTTGTTAGCTTAA+TGG | + | chr6_3:63881232-63881251 | Msa0956520:intron | 30.0% |
| ! | TGTTTGTTAAGTGTTCTAAG+TGG | + | chr6_3:63881268-63881287 | Msa0956520:intron | 30.0% |
| ! | GTTTTCTCACATTGTTTGTT+TGG | + | chr6_3:63881582-63881601 | Msa0956520:intron | 30.0% |
| AATACCATAATTGACAGCAA+GGG | - | chr6_3:63881784-63881803 | None:intergenic | 30.0% | |
| TTCTTAGTCATCAGAGAAAA+TGG | + | chr6_3:63881951-63881970 | Msa0956520:CDS | 30.0% | |
| TTTGTGAGTTGTGATTGTTT+AGG | + | chr6_3:63882185-63882204 | Msa0956520:intron | 30.0% | |
| !!! | TATGTGGTTTTGTTCTCTAT+AGG | + | chr6_3:63882233-63882252 | Msa0956520:intron | 30.0% |
| AAGTGAAGTTGAAATTGAGA+AGG | + | chr6_3:63882335-63882354 | Msa0956520:CDS | 30.0% | |
| ACACACATCTTTAATCAGAA+AGG | - | chr6_3:63882487-63882506 | None:intergenic | 30.0% | |
| !!! | GTTGATGGTGATTTTTTAAC+TGG | + | chr6_3:63882556-63882575 | Msa0956520:intron | 30.0% |
| ! | TCTTAAGTTAGTTTATCGGT+AGG | - | chr6_3:63882787-63882806 | None:intergenic | 30.0% |
| ! | ATGTCAATATGTGGTGATTT+TGG | + | chr6_3:63882994-63883013 | Msa0956520:CDS | 30.0% |
| CCAAACAAATTAACACCTTT+AGG | - | chr6_3:63883332-63883351 | None:intergenic | 30.0% | |
| !! | CCTAAAGGTGTTAATTTGTT+TGG | + | chr6_3:63883329-63883348 | Msa0956520:intron | 30.0% |
| !! | TTTCATTGATGATGGTAGTT+TGG | + | chr6_3:63883951-63883970 | Msa0956520:intron | 30.0% |
| !! | TTCATTGATGATGGTAGTTT+GGG | + | chr6_3:63883952-63883971 | Msa0956520:intron | 30.0% |
| CCCCAATAGTTACAATTATT+TGG | - | chr6_3:63884020-63884039 | None:intergenic | 30.0% | |
| !!! | TTTAGTTAGTTTTGGGAGTT+TGG | + | chr6_3:63884155-63884174 | Msa0956520:intron | 30.0% |
| !!! | ATTACTTTTCTAAAACCAGC+TGG | - | chr6_3:63884386-63884405 | None:intergenic | 30.0% |
| !! | TAGCAAGGCATTGTATAAAA+TGG | - | chr6_3:63884550-63884569 | None:intergenic | 30.0% |
| CAAAAGAGTTACTGTAGTTT+GGG | - | chr6_3:63884579-63884598 | None:intergenic | 30.0% | |
| TCAAAAGAGTTACTGTAGTT+TGG | - | chr6_3:63884580-63884599 | None:intergenic | 30.0% | |
| ! | TATGGAAGTACAAACACATT+TGG | - | chr6_3:63884715-63884734 | None:intergenic | 30.0% |
| ACAAAGACATTGAACATGAT+AGG | - | chr6_3:63884930-63884949 | None:intergenic | 30.0% | |
| ACACTATTAAAATAGTGCTG+TGG | + | chr6_3:63885290-63885309 | Msa0956520:three_prime_UTR | 30.0% | |
| ! | AAAATGGTCCTTTTCAAAGT+GGG | - | chr6_3:63885462-63885481 | None:intergenic | 30.0% |
| ! | AAAAATGGTCCTTTTCAAAG+TGG | - | chr6_3:63885463-63885482 | None:intergenic | 30.0% |
| CATGATGGTATGAAATTGTT+TGG | + | chr6_3:63885627-63885646 | Msa0956520:three_prime_UTR | 30.0% | |
| AGGGTAAAATAAGGATTCAG+CGG | - | chr6_3:63879240-63879259 | None:intergenic | 35.0% | |
| TTCTTCTCTACGATTCATCA+AGG | + | chr6_3:63879309-63879328 | Msa0956520:five_prime_UTR | 35.0% | |
| AAGTGGAGAAAAGAGGATTA+GGG | - | chr6_3:63879371-63879390 | None:intergenic | 35.0% | |
| ! | TTTGGTTTACGTTCAATTGC+TGG | + | chr6_3:63879460-63879479 | Msa0956520:intron | 35.0% |
| GCCAAGAGGAATTATATTTC+AGG | + | chr6_3:63879705-63879724 | Msa0956520:intron | 35.0% | |
| TTCACGAAAACCAAACTCTT+AGG | + | chr6_3:63880207-63880226 | Msa0956520:intron | 35.0% | |
| GTAGATAGAGAAGGATTAAG+AGG | + | chr6_3:63880239-63880258 | Msa0956520:intron | 35.0% | |
| CACATATGACATCATTTCGT+TGG | - | chr6_3:63880286-63880305 | None:intergenic | 35.0% | |
| ATGTGTTAATCAACTTCGCA+TGG | + | chr6_3:63880301-63880320 | Msa0956520:intron | 35.0% | |
| ! | TGGCTTTCTATTTTCACGAT+CGG | + | chr6_3:63880460-63880479 | Msa0956520:intron | 35.0% |
| GACAGGATATGATAAGAGTT+TGG | - | chr6_3:63880492-63880511 | None:intergenic | 35.0% | |
| GATTTGAAGAAGAACGAGAT+TGG | - | chr6_3:63880709-63880728 | None:intergenic | 35.0% | |
| TAACCTTCGATTTCCTCTAT+TGG | + | chr6_3:63880799-63880818 | Msa0956520:intron | 35.0% | |
| !!! | TTCCGTTTTTTGTGCTCTAA+TGG | + | chr6_3:63881123-63881142 | Msa0956520:intron | 35.0% |
| TTTAACAAATACCAGCACAG+AGG | - | chr6_3:63881204-63881223 | None:intergenic | 35.0% | |
| ! | CTGTGCTGGTATTTGTTAAA+AGG | + | chr6_3:63881204-63881223 | Msa0956520:intron | 35.0% |
| ACACTTAACAAACACCTAGA+GGG | - | chr6_3:63881262-63881281 | None:intergenic | 35.0% | |
| AACACTTAACAAACACCTAG+AGG | - | chr6_3:63881263-63881282 | None:intergenic | 35.0% | |
| GAAAAAAAATGCAATGGGGT+TGG | + | chr6_3:63881358-63881377 | Msa0956520:intron | 35.0% | |
| TATAATTCAAGCTCAGCAAG+AGG | + | chr6_3:63881548-63881567 | Msa0956520:intron | 35.0% | |
| ATAATTCAAGCTCAGCAAGA+GGG | + | chr6_3:63881549-63881568 | Msa0956520:intron | 35.0% | |
| ! | TCACATTGTTTGTTTGGTTC+AGG | + | chr6_3:63881588-63881607 | Msa0956520:intron | 35.0% |
| ATACCATAATTGACAGCAAG+GGG | - | chr6_3:63881783-63881802 | None:intergenic | 35.0% | |
| CAATACCATAATTGACAGCA+AGG | - | chr6_3:63881785-63881804 | None:intergenic | 35.0% | |
| ! | TATAGGTTGAAATCCAAGTG+AGG | + | chr6_3:63882250-63882269 | Msa0956520:intron | 35.0% |
| GAAACTGTATTGTGTGAGTA+AGG | + | chr6_3:63882272-63882291 | Msa0956520:CDS | 35.0% | |
| CACCATCAACATTCATGTAA+GGG | - | chr6_3:63882546-63882565 | None:intergenic | 35.0% | |
| TCACCATCAACATTCATGTA+AGG | - | chr6_3:63882547-63882566 | None:intergenic | 35.0% | |
| TTACATTTCCAACTTGAGAC+TGG | - | chr6_3:63882682-63882701 | None:intergenic | 35.0% | |
| CACAAGCAAATGTCAATATG+TGG | + | chr6_3:63882985-63883004 | Msa0956520:CDS | 35.0% | |
| CAGAAGATTCCTTTACTCAT+AGG | + | chr6_3:63883049-63883068 | Msa0956520:CDS | 35.0% | |
| TACAGGTCTTGATGTTGAAA+TGG | + | chr6_3:63883086-63883105 | Msa0956520:CDS | 35.0% | |
| ! | TTTGCGTTTGAAATTGTCGA+GGG | + | chr6_3:63883162-63883181 | Msa0956520:intron | 35.0% |
| !!! | TTGTGTTTTTTGGCAGGTTA+TGG | + | chr6_3:63883209-63883228 | Msa0956520:intron | 35.0% |
| GAAGATACTGCACATTCATA+GGG | - | chr6_3:63883493-63883512 | None:intergenic | 35.0% | |
| AGTATCTTCCAAATACTCTG+CGG | + | chr6_3:63883504-63883523 | Msa0956520:intron | 35.0% | |
| CAAATGTGATAGGATGATGA+TGG | + | chr6_3:63883612-63883631 | Msa0956520:intron | 35.0% | |
| ! | TTTTGTAAAATTGAGAGGGG+TGG | + | chr6_3:63883671-63883690 | Msa0956520:intron | 35.0% |
| GAAAATGTACTTGGGTAAAC+AGG | + | chr6_3:63883872-63883891 | Msa0956520:intron | 35.0% | |
| !! | TCATTGATGATGGTAGTTTG+GGG | + | chr6_3:63883953-63883972 | Msa0956520:intron | 35.0% |
| CAAGTTAGTGACACTTGTTT+AGG | + | chr6_3:63884090-63884109 | Msa0956520:intron | 35.0% | |
| TAGGTTCCTAACTATTGTTG+AGG | + | chr6_3:63884109-63884128 | Msa0956520:intron | 35.0% | |
| GGAATTCCTCAACAATAGTT+AGG | - | chr6_3:63884118-63884137 | None:intergenic | 35.0% | |
| AACTATTGTTGAGGAATTCC+TGG | + | chr6_3:63884118-63884137 | Msa0956520:intron | 35.0% | |
| ACTATTGTTGAGGAATTCCT+GGG | + | chr6_3:63884119-63884138 | Msa0956520:intron | 35.0% | |
| TAAAAGAGGAAAAATACCCC+AGG | - | chr6_3:63884139-63884158 | None:intergenic | 35.0% | |
| CTCCCAAAACTAACTAAAAG+AGG | - | chr6_3:63884153-63884172 | None:intergenic | 35.0% | |
| ! | GAGTAATGATTTTGCTTTGC+AGG | + | chr6_3:63884299-63884318 | Msa0956520:intron | 35.0% |
| TCAGTATTCAAGTCACCAAA+AGG | - | chr6_3:63884345-63884364 | None:intergenic | 35.0% | |
| ACTTGAATACTGAAGCAGAA+AGG | + | chr6_3:63884352-63884371 | Msa0956520:CDS | 35.0% | |
| ! | TAAAATGGTCTTACAGCCAA+CGG | - | chr6_3:63884535-63884554 | None:intergenic | 35.0% |
| ! | TCTTTTGATGTCTTCATTCG+AGG | + | chr6_3:63884592-63884611 | Msa0956520:CDS | 35.0% |
| ! | GCACGCAATTAATCATGTTT+TGG | + | chr6_3:63884670-63884689 | Msa0956520:intron | 35.0% |
| ! | TCCATAAAAGCTGAAGCTTT+TGG | + | chr6_3:63884729-63884748 | Msa0956520:intron | 35.0% |
| ! | CCATAAAAGCTGAAGCTTTT+GGG | + | chr6_3:63884730-63884749 | Msa0956520:intron | 35.0% |
| ! | CTATTCAATCCTTGTTGCTT+AGG | + | chr6_3:63884772-63884791 | Msa0956520:intron | 35.0% |
| CTTTGTTAATACGGGTGTTT+AGG | + | chr6_3:63884944-63884963 | Msa0956520:intron | 35.0% | |
| ! | AAGTAAGTCCAAGGCATTAT+TGG | - | chr6_3:63885264-63885283 | None:intergenic | 35.0% |
| TGTTTGGAAAAGTAAGTCCA+AGG | - | chr6_3:63885273-63885292 | None:intergenic | 35.0% | |
| ! | TTCTATTTTCACCGTCAACT+TGG | + | chr6_3:63885325-63885344 | Msa0956520:three_prime_UTR | 35.0% |
| !!! | TTAAGATCTTTTGGAGCTGA+TGG | + | chr6_3:63885586-63885605 | Msa0956520:three_prime_UTR | 35.0% |
| AAATAAGGATTCAGCGGGAT+AGG | - | chr6_3:63879234-63879253 | None:intergenic | 40.0% | |
| GGGTAAAATAAGGATTCAGC+GGG | - | chr6_3:63879239-63879258 | None:intergenic | 40.0% | |
| ! | AAGAGCGTGAGGGTAAAATA+AGG | - | chr6_3:63879249-63879268 | None:intergenic | 40.0% |
| CAACAGAGAAAACGAGAAAG+AGG | - | chr6_3:63879277-63879296 | None:intergenic | 40.0% | |
| ! | CTTTCTCGTTTTCTCTGTTG+CGG | + | chr6_3:63879277-63879296 | Msa0956520:five_prime_UTR | 40.0% |
| GAAGTGGAGAAAAGAGGATT+AGG | - | chr6_3:63879372-63879391 | None:intergenic | 40.0% | |
| AAGAGAGAAGTGGAGAAAAG+AGG | - | chr6_3:63879378-63879397 | None:intergenic | 40.0% | |
| CTCCACTTCTCTCTTTGATA+TGG | + | chr6_3:63879383-63879402 | Msa0956520:intron | 40.0% | |
| CACCATATCAAAGAGAGAAG+TGG | - | chr6_3:63879388-63879407 | None:intergenic | 40.0% | |
| !! | GGTGCAACAGTTTTTAGAGA+TGG | + | chr6_3:63880133-63880152 | Msa0956520:intron | 40.0% |
| CAACGACTAGTAGATAGAGA+AGG | + | chr6_3:63880230-63880249 | Msa0956520:intron | 40.0% | |
| CTTTCAACTTTCCCTCAGTA+CGG | - | chr6_3:63880361-63880380 | None:intergenic | 40.0% | |
| GAGGGAAAGTTGAAAGAAGA+TGG | + | chr6_3:63880365-63880384 | Msa0956520:intron | 40.0% | |
| ! | GGCTTTCTATTTTCACGATC+GGG | + | chr6_3:63880461-63880480 | Msa0956520:intron | 40.0% |
| ! | TTTTCACAGTTGTCAGCACT+TGG | - | chr6_3:63880610-63880629 | None:intergenic | 40.0% |
| TGAGAGTTTCGGAGAAATGA+GGG | - | chr6_3:63880638-63880657 | None:intergenic | 40.0% | |
| ATGAGAGTTTCGGAGAAATG+AGG | - | chr6_3:63880639-63880658 | None:intergenic | 40.0% | |
| AAGAAGAACGAGATTGGAGA+TGG | - | chr6_3:63880703-63880722 | None:intergenic | 40.0% | |
| CTACCAATAGAGGAAATCGA+AGG | - | chr6_3:63880805-63880824 | None:intergenic | 40.0% | |
| ATCATATATGGTGCAGTCAC+TGG | - | chr6_3:63881512-63881531 | None:intergenic | 40.0% | |
| AATCATTGAGAGCCTCAACT+CGG | - | chr6_3:63881860-63881879 | None:intergenic | 40.0% | |
| ! | TGTTGTGAGGCACCTTTAAT+AGG | - | chr6_3:63882104-63882123 | None:intergenic | 40.0% |
| !! | TATTAAAGGTGCCTCACAAC+AGG | + | chr6_3:63882103-63882122 | Msa0956520:CDS | 40.0% |
| ATCATAACCAACCTGTTGTG+AGG | - | chr6_3:63882117-63882136 | None:intergenic | 40.0% | |
| CACAATACAGTTTCCTCACT+TGG | - | chr6_3:63882266-63882285 | None:intergenic | 40.0% | |
| ATTAATCGGCAGAGTAGGAA+TGG | - | chr6_3:63882298-63882317 | None:intergenic | 40.0% | |
| TCGATATTAATCGGCAGAGT+AGG | - | chr6_3:63882303-63882322 | None:intergenic | 40.0% | |
| ! | TACTCTGCCGATTAATATCG+AGG | + | chr6_3:63882302-63882321 | Msa0956520:CDS | 40.0% |
| GCAGCATCCTCGATATTAAT+CGG | - | chr6_3:63882312-63882331 | None:intergenic | 40.0% | |
| TGAAATTGAGAAGGCCATTC+AGG | + | chr6_3:63882344-63882363 | Msa0956520:CDS | 40.0% | |
| CTACAATCAAGATGAGAGTG+TGG | + | chr6_3:63882419-63882438 | Msa0956520:intron | 40.0% | |
| CTCCCTTACATGAATGTTGA+TGG | + | chr6_3:63882541-63882560 | Msa0956520:intron | 40.0% | |
| !!! | GGTGATTTTTTAACTGGTGC+AGG | + | chr6_3:63882562-63882581 | Msa0956520:intron | 40.0% |
| !!! | ATTTTTTAACTGGTGCAGGC+TGG | + | chr6_3:63882566-63882585 | Msa0956520:intron | 40.0% |
| ! | ACAACTTGTTCGTGTGAATC+AGG | + | chr6_3:63882592-63882611 | Msa0956520:CDS | 40.0% |
| !! | CGGAAAATTCCTTGATTTGC+TGG | - | chr6_3:63882656-63882675 | None:intergenic | 40.0% |
| ! | GTTGCTGCTTGTAAGTTTGT+TGG | + | chr6_3:63882753-63882772 | Msa0956520:intron | 40.0% |
| ! | ATGCATTTTGCGGTGTGATA+CGG | + | chr6_3:63882808-63882827 | Msa0956520:intron | 40.0% |
| CTAGATCCAGCAATCAACTT+AGG | - | chr6_3:63882892-63882911 | None:intergenic | 40.0% | |
| TTGATTGCTGGATCTAGTGA+GGG | + | chr6_3:63882895-63882914 | Msa0956520:CDS | 40.0% | |
| TCTTTAGGCTGGACTACAAA+GGG | + | chr6_3:63882929-63882948 | Msa0956520:CDS | 40.0% | |
| GACATTTGCTTGTGAAGTTG+AGG | - | chr6_3:63882979-63882998 | None:intergenic | 40.0% | |
| !!! | TTTGGCCGTGTTTTTGAGAT+TGG | + | chr6_3:63883012-63883031 | Msa0956520:CDS | 40.0% |
| CAGGACCAATCTCAAAAACA+CGG | - | chr6_3:63883020-63883039 | None:intergenic | 40.0% | |
| ! | GAATCTTCTGCTCTAAACAC+AGG | - | chr6_3:63883039-63883058 | None:intergenic | 40.0% |
| ! | GTTTGCGTTTGAAATTGTCG+AGG | + | chr6_3:63883161-63883180 | Msa0956520:intron | 40.0% |
| ! | AACACCTTTAGGGGTTCAAA+CGG | - | chr6_3:63883321-63883340 | None:intergenic | 40.0% |
| GGAAGATACTGCACATTCAT+AGG | - | chr6_3:63883494-63883513 | None:intergenic | 40.0% | |
| ! | TATGTAAGCCGCAGAGTATT+TGG | - | chr6_3:63883515-63883534 | None:intergenic | 40.0% |
| !! | AGAAGGTATTCAGATGCTCA+AGG | + | chr6_3:63883538-63883557 | Msa0956520:CDS | 40.0% |
| !! | ATGTGATAGGATGATGATGG+CGG | + | chr6_3:63883615-63883634 | Msa0956520:intron | 40.0% |
| GACAGGGATAAAAGACGTAA+AGG | - | chr6_3:63883649-63883668 | None:intergenic | 40.0% | |
| !! | TGGAAGTTTAAGCACTGGTA+GGG | + | chr6_3:63883691-63883710 | Msa0956520:intron | 40.0% |
| CTATTGTTGAGGAATTCCTG+GGG | + | chr6_3:63884120-63884139 | Msa0956520:intron | 40.0% | |
| TCATTACTCGCTGCTAAACA+AGG | - | chr6_3:63884288-63884307 | None:intergenic | 40.0% | |
| ! | GATTTTGCTTTGCAGGAAGT+TGG | + | chr6_3:63884306-63884325 | Msa0956520:intron | 40.0% |
| ! | GGAGTAGAGATTGAACCTTT+TGG | + | chr6_3:63884327-63884346 | Msa0956520:CDS | 40.0% |
| ACTGAAGCAGAAAGGAAACT+AGG | + | chr6_3:63884360-63884379 | Msa0956520:CDS | 40.0% | |
| CAGAGTTCTATATCCTTCAC+CGG | + | chr6_3:63884506-63884525 | Msa0956520:CDS | 40.0% | |
| ! | AAAATGGTCTTACAGCCAAC+GGG | - | chr6_3:63884534-63884553 | None:intergenic | 40.0% |
| !! | TAGTTTGGGTTGTCATAGCA+AGG | - | chr6_3:63884565-63884584 | None:intergenic | 40.0% |
| ! | ACACATTTGGAGAAGCATGA+TGG | - | chr6_3:63884702-63884721 | None:intergenic | 40.0% |
| ! | CCCAAAAGCTTCAGCTTTTA+TGG | - | chr6_3:63884733-63884752 | None:intergenic | 40.0% |
| TTAGGCGAGGAGATAATATC+AGG | + | chr6_3:63884790-63884809 | Msa0956520:intron | 40.0% | |
| ! | TATCCACGTGCCTGAATTTT+TGG | + | chr6_3:63884822-63884841 | Msa0956520:CDS | 40.0% |
| GCACGTTCTTCCAAAAATTC+AGG | - | chr6_3:63884835-63884854 | None:intergenic | 40.0% | |
| !! | CTGCTTACATCGATTCTTTC+AGG | + | chr6_3:63884887-63884906 | Msa0956520:CDS | 40.0% |
| ATAACCAGAGCTCAGTAAGA+GGG | - | chr6_3:63884974-63884993 | None:intergenic | 40.0% | |
| TATAACCAGAGCTCAGTAAG+AGG | - | chr6_3:63884975-63884994 | None:intergenic | 40.0% | |
| ATGCAGTTCTATATGAAGCG+GGG | - | chr6_3:63885419-63885438 | None:intergenic | 40.0% | |
| CATGCAGTTCTATATGAAGC+GGG | - | chr6_3:63885420-63885439 | None:intergenic | 40.0% | |
| GCATGCAGTTCTATATGAAG+CGG | - | chr6_3:63885421-63885440 | None:intergenic | 40.0% | |
| ! | TTACCACACCCACTTTGAAA+AGG | + | chr6_3:63885451-63885470 | Msa0956520:three_prime_UTR | 40.0% |
| GAGAAAACGAGAAAGAGGAG+TGG | - | chr6_3:63879272-63879291 | None:intergenic | 45.0% | |
| TGAAAAGCTTTGCAGCCAAG+AGG | + | chr6_3:63879691-63879710 | Msa0956520:intron | 45.0% | |
| CTAGTCGTTGCCTAAGAGTT+TGG | - | chr6_3:63880220-63880239 | None:intergenic | 45.0% | |
| GGAGTGAGTGATGAGAGTTT+CGG | - | chr6_3:63880649-63880668 | None:intergenic | 45.0% | |
| GGCGAAGAAGAAAAAGAACG+CGG | - | chr6_3:63880675-63880694 | None:intergenic | 45.0% | |
| ! | CGTTTATTGGGTTGCCTACT+AGG | + | chr6_3:63880965-63880984 | Msa0956520:intron | 45.0% |
| AATGCAATGGGGTTGGAATG+AGG | + | chr6_3:63881365-63881384 | Msa0956520:intron | 45.0% | |
| ATGCAATGGGGTTGGAATGA+GGG | + | chr6_3:63881366-63881385 | Msa0956520:intron | 45.0% | |
| AAGCAAAAAGGCCTCCAAGA+AGG | + | chr6_3:63881674-63881693 | Msa0956520:CDS | 45.0% | |
| ! | GATCCCCTTGCTGTCAATTA+TGG | + | chr6_3:63881777-63881796 | Msa0956520:CDS | 45.0% |
| TTCGATTGGAGCTCAATGAG+CGG | - | chr6_3:63881810-63881829 | None:intergenic | 45.0% | |
| TCCAGTCGTTGACATTGACA+GGG | - | chr6_3:63881836-63881855 | None:intergenic | 45.0% | |
| ATCATTGAGAGCCTCAACTC+GGG | - | chr6_3:63881859-63881878 | None:intergenic | 45.0% | |
| TGAGGCTCTCAATGATTCAC+TGG | + | chr6_3:63881863-63881882 | Msa0956520:CDS | 45.0% | |
| TGATTCACTGGAGAACAAGC+CGG | + | chr6_3:63881875-63881894 | Msa0956520:CDS | 45.0% | |
| CACAAGCTATTCGACCAGTT+GGG | + | chr6_3:63881916-63881935 | Msa0956520:CDS | 45.0% | |
| TGGTTTCACTGTACAGTGCT+TGG | + | chr6_3:63881971-63881990 | Msa0956520:CDS | 45.0% | |
| ATCTGCGGACTCACTAAATC+AGG | - | chr6_3:63882008-63882027 | None:intergenic | 45.0% | |
| TGATTTAGTGAGTCCGCAGA+TGG | + | chr6_3:63882007-63882026 | Msa0956520:CDS | 45.0% | |
| CGACATCGACAATAGACTCA+CGG | - | chr6_3:63882055-63882074 | None:intergenic | 45.0% | |
| GAGTCTATTGTCGATGTCGA+AGG | + | chr6_3:63882056-63882075 | Msa0956520:CDS | 45.0% | |
| TATTGTCGATGTCGAAGGTG+TGG | + | chr6_3:63882061-63882080 | Msa0956520:CDS | 45.0% | |
| TTTAATAGGAGCGGCTGGAA+TGG | - | chr6_3:63882090-63882109 | None:intergenic | 45.0% | |
| ATTCCAGCCGCTCCTATTAA+AGG | + | chr6_3:63882089-63882108 | Msa0956520:CDS | 45.0% | |
| ! | TGAGGCACCTTTAATAGGAG+CGG | - | chr6_3:63882099-63882118 | None:intergenic | 45.0% |
| TTCCAACTTGAGACTGGATG+CGG | - | chr6_3:63882676-63882695 | None:intergenic | 45.0% | |
| CAGCAATCAACTTAGGAGTG+TGG | - | chr6_3:63882885-63882904 | None:intergenic | 45.0% | |
| !! | CACACTCCTAAGTTGATTGC+TGG | + | chr6_3:63882883-63882902 | Msa0956520:CDS | 45.0% |
| GTTGATTGCTGGATCTAGTG+AGG | + | chr6_3:63882894-63882913 | Msa0956520:CDS | 45.0% | |
| GTCTTTAGGCTGGACTACAA+AGG | + | chr6_3:63882928-63882947 | Msa0956520:CDS | 45.0% | |
| GCACAGATGCCTATGAGTAA+AGG | - | chr6_3:63883061-63883080 | None:intergenic | 45.0% | |
| TAAGAAGGATCTCGAAGCTG+TGG | + | chr6_3:63883284-63883303 | Msa0956520:CDS | 45.0% | |
| ! | ACACCTTTAGGGGTTCAAAC+GGG | - | chr6_3:63883320-63883339 | None:intergenic | 45.0% |
| CTGCGGCTTACATATGAAGA+AGG | + | chr6_3:63883521-63883540 | Msa0956520:CDS | 45.0% | |
| !! | GTGGAAGTTTAAGCACTGGT+AGG | + | chr6_3:63883690-63883709 | Msa0956520:intron | 45.0% |
| CTTCCAAAAATTCAGGCACG+TGG | - | chr6_3:63884828-63884847 | None:intergenic | 45.0% | |
| TAACCAGAGCTCAGTAAGAG+GGG | - | chr6_3:63884973-63884992 | None:intergenic | 45.0% | |
| AGATATGGTGTACCACCACA+CGG | + | chr6_3:63885051-63885070 | Msa0956520:intron | 45.0% | |
| CGTGTAGTAATGCTCTTCTG+TGG | + | chr6_3:63885096-63885115 | Msa0956520:CDS | 45.0% | |
| ATCATGGTGCAATCCTGAGT+GGG | - | chr6_3:63885161-63885180 | None:intergenic | 45.0% | |
| TCAGGCTTCAGTTGAATGTG+AGG | - | chr6_3:63885226-63885245 | None:intergenic | 45.0% | |
| CACATTCAACTGAAGCCTGA+AGG | + | chr6_3:63885226-63885245 | Msa0956520:three_prime_UTR | 45.0% | |
| ! | AAACACCAGCTCCAAGTTGA+CGG | - | chr6_3:63885339-63885358 | None:intergenic | 45.0% |
| TCAACTTTCCCTCAGTACGG+AGG | - | chr6_3:63880358-63880377 | None:intergenic | 50.0% | |
| GGTCAGGATAGGATAGAGAC+AGG | - | chr6_3:63880509-63880528 | None:intergenic | 50.0% | |
| ! | GTGCGTTTGATGGTCAGGAT+AGG | - | chr6_3:63880520-63880539 | None:intergenic | 50.0% |
| CATACTCAGGGTGCGTTTGA+TGG | - | chr6_3:63880530-63880549 | None:intergenic | 50.0% | |
| AGAAGAAAAAGAACGCGGCG+AGG | - | chr6_3:63880670-63880689 | None:intergenic | 50.0% | |
| ACGAGATTGGAGATGGTGTG+TGG | - | chr6_3:63880696-63880715 | None:intergenic | 50.0% | |
| !! | AGCTTAATGGGTTGCCCTCT+AGG | + | chr6_3:63881245-63881264 | Msa0956520:intron | 50.0% |
| TCAAGAGCCGACACTGTCAT+CGG | + | chr6_3:63881635-63881654 | Msa0956520:CDS | 50.0% | |
| GATCCTTCCGATGACAGTGT+CGG | - | chr6_3:63881645-63881664 | None:intergenic | 50.0% | |
| !!! | GCGTTGCTTTTCCAGCTTTG+CGG | - | chr6_3:63881703-63881722 | None:intergenic | 50.0% |
| AGAGAGAGTCGATGTAGCAG+AGG | - | chr6_3:63881748-63881767 | None:intergenic | 50.0% | |
| TCGATTGGAGCTCAATGAGC+GGG | - | chr6_3:63881809-63881828 | None:intergenic | 50.0% | |
| CATTGACAGGGGTCTTCGAT+TGG | - | chr6_3:63881824-63881843 | None:intergenic | 50.0% | |
| CCAGTCGTTGACATTGACAG+GGG | - | chr6_3:63881835-63881854 | None:intergenic | 50.0% | |
| GTCCAGTCGTTGACATTGAC+AGG | - | chr6_3:63881837-63881856 | None:intergenic | 50.0% | |
| ! | AACAAGCCGGTTCTAATCCG+TGG | + | chr6_3:63881888-63881907 | Msa0956520:CDS | 50.0% |
| ! | ACAAGCCGGTTCTAATCCGT+GGG | + | chr6_3:63881889-63881908 | Msa0956520:CDS | 50.0% |
| GCACAAGCTATTCGACCAGT+TGG | + | chr6_3:63881915-63881934 | Msa0956520:CDS | 50.0% | |
| TCGACCAGTTGGGAAGAAGA+TGG | + | chr6_3:63881926-63881945 | Msa0956520:CDS | 50.0% | |
| AACGCCATCTTCTTCCCAAC+TGG | - | chr6_3:63881933-63881952 | None:intergenic | 50.0% | |
| CACTGTACAGTGCTTGGTTC+AGG | + | chr6_3:63881977-63881996 | Msa0956520:CDS | 50.0% | |
| GCGGCAAATTTCACCATCTG+CGG | - | chr6_3:63882023-63882042 | None:intergenic | 50.0% | |
| AATAGACTCACGGCTGAGAG+CGG | - | chr6_3:63882045-63882064 | None:intergenic | 50.0% | |
| !! | AAAGGTGCCTCACAACAGGT+TGG | + | chr6_3:63882107-63882126 | Msa0956520:intron | 50.0% |
| !! | CTTGATTTGCTGGTGTTCGC+AGG | - | chr6_3:63882646-63882665 | None:intergenic | 50.0% |
| CTGCGAACACCAGCAAATCA+AGG | + | chr6_3:63882644-63882663 | Msa0956520:CDS | 50.0% | |
| TTCCGCATCCAGTCTCAAGT+TGG | + | chr6_3:63882671-63882690 | Msa0956520:CDS | 50.0% | |
| TTTGCGGTGTGATACGGTGT+TGG | + | chr6_3:63882814-63882833 | Msa0956520:intron | 50.0% | |
| TTGCGGTGTGATACGGTGTT+GGG | + | chr6_3:63882815-63882834 | Msa0956520:intron | 50.0% | |
| ATTGCTGGATCTAGTGAGGG+TGG | + | chr6_3:63882898-63882917 | Msa0956520:CDS | 50.0% | |
| AGGCATCTGTGCGAGTTTAC+AGG | + | chr6_3:63883069-63883088 | Msa0956520:CDS | 50.0% | |
| GTACCCGTTTGAACCCCTAA+AGG | + | chr6_3:63883314-63883333 | Msa0956520:CDS | 50.0% | |
| AGGGGTGGAAGTTTAAGCAC+TGG | + | chr6_3:63883686-63883705 | Msa0956520:intron | 50.0% | |
| AGAAAGGAAACTAGGCCAGC+TGG | + | chr6_3:63884368-63884387 | Msa0956520:CDS | 50.0% | |
| ! | CAATCCTTGTTGCTTAGGCG+AGG | + | chr6_3:63884777-63884796 | Msa0956520:intron | 50.0% |
| ATCTCCTCGCCTAAGCAACA+AGG | - | chr6_3:63884784-63884803 | None:intergenic | 50.0% | |
| GAAGAACGTGCACAAGCTTG+CGG | + | chr6_3:63884844-63884863 | Msa0956520:CDS | 50.0% | |
| TTTATCCACGTGACCCACTC+AGG | + | chr6_3:63885145-63885164 | Msa0956520:CDS | 50.0% | |
| CATCATGGTGCAATCCTGAG+TGG | - | chr6_3:63885162-63885181 | None:intergenic | 50.0% | |
| GCTTGACGCCAATAATGCCT+TGG | + | chr6_3:63885253-63885272 | Msa0956520:three_prime_UTR | 50.0% | |
| TTTCACCGTCAACTTGGAGC+TGG | + | chr6_3:63885331-63885350 | Msa0956520:three_prime_UTR | 50.0% | |
| ! | GGTCCTTTTCAAAGTGGGTG+TGG | - | chr6_3:63885457-63885476 | None:intergenic | 50.0% |
| ! | AGAGGAGTGGAAGAGCGTGA+GGG | - | chr6_3:63879259-63879278 | None:intergenic | 55.0% |
| ! | AAGAGGAGTGGAAGAGCGTG+AGG | - | chr6_3:63879260-63879279 | None:intergenic | 55.0% |
| ATGTGGTCTCCTCCGTACTG+AGG | + | chr6_3:63880346-63880365 | Msa0956520:intron | 55.0% | |
| TGTGGTCTCCTCCGTACTGA+GGG | + | chr6_3:63880347-63880366 | Msa0956520:intron | 55.0% | |
| ! | TCAGGGTGCGTTTGATGGTC+AGG | - | chr6_3:63880525-63880544 | None:intergenic | 55.0% |
| GTGATGTGATGCCTCTGTGC+TGG | + | chr6_3:63881190-63881209 | Msa0956520:intron | 55.0% | |
| CTTTGCGGCATCCTTCTTGG+AGG | - | chr6_3:63881688-63881707 | None:intergenic | 55.0% | |
| CAGCTTTGCGGCATCCTTCT+TGG | - | chr6_3:63881691-63881710 | None:intergenic | 55.0% | |
| CAAGAAGGATGCCGCAAAGC+TGG | + | chr6_3:63881689-63881708 | Msa0956520:CDS | 55.0% | |
| AGTCGATGTAGCAGAGGTGG+CGG | - | chr6_3:63881742-63881761 | None:intergenic | 55.0% | |
| GAGAGTCGATGTAGCAGAGG+TGG | - | chr6_3:63881745-63881764 | None:intergenic | 55.0% | |
| CCCCTGTCAATGTCAACGAC+TGG | + | chr6_3:63881832-63881851 | Msa0956520:CDS | 55.0% | |
| ! | GAATAGCTTGTGCCCTCCCA+CGG | - | chr6_3:63881908-63881927 | None:intergenic | 55.0% |
| GCACCTTTAATAGGAGCGGC+TGG | - | chr6_3:63882095-63882114 | None:intergenic | 55.0% | |
| ! | GGTGTGATACGGTGTTGGGT+AGG | + | chr6_3:63882819-63882838 | Msa0956520:intron | 55.0% |
| AGGGTGGAGCTGCTGTCTTT+AGG | + | chr6_3:63882914-63882933 | Msa0956520:CDS | 55.0% | |
| TGGAGCTGCTGTCTTTAGGC+TGG | + | chr6_3:63882918-63882937 | Msa0956520:CDS | 55.0% | |
| GAAGTTGAGGTGACTGAGCC+AGG | - | chr6_3:63882966-63882985 | None:intergenic | 55.0% | |
| TATCCTTCACCGGTACCCGT+TGG | + | chr6_3:63884516-63884535 | Msa0956520:CDS | 55.0% | |
| GTCTTACAGCCAACGGGTAC+CGG | - | chr6_3:63884528-63884547 | None:intergenic | 55.0% | |
| TGCACAAGCTTGCGGCATTG+AGG | + | chr6_3:63884852-63884871 | Msa0956520:CDS | 55.0% | |
| TATGGTGTACCACCACACGG+TGG | + | chr6_3:63885054-63885073 | Msa0956520:CDS | 55.0% | |
| TGGCGTCAAGCTACACCTTC+AGG | - | chr6_3:63885244-63885263 | None:intergenic | 55.0% | |
| TATGAAGCGGGGACTACAGC+AGG | - | chr6_3:63885408-63885427 | None:intergenic | 55.0% | |
| GAGCCGACACTGTCATCGGA+AGG | + | chr6_3:63881639-63881658 | Msa0956520:CDS | 60.0% | |
| CAACGACTGGACCCGAGTTG+AGG | + | chr6_3:63881845-63881864 | Msa0956520:CDS | 60.0% | |
| ! | AGCCGGTTCTAATCCGTGGG+AGG | + | chr6_3:63881892-63881911 | Msa0956520:CDS | 60.0% |
| ! | GCCGGTTCTAATCCGTGGGA+GGG | + | chr6_3:63881893-63881912 | Msa0956520:CDS | 60.0% |
| !! | GCCCTCCCACGGATTAGAAC+CGG | - | chr6_3:63881897-63881916 | None:intergenic | 60.0% |
| CAAAGGGCAACCTGCATGCC+TGG | + | chr6_3:63882945-63882964 | Msa0956520:CDS | 60.0% | |
| CTGCCCCTCTTACTGAGCTC+TGG | + | chr6_3:63884967-63884986 | Msa0956520:intron | 60.0% | |
| GTACCACCACACGGTGGCTT+TGG | + | chr6_3:63885060-63885079 | Msa0956520:CDS | 60.0% | |
| ACTCCAAAGCCACCGTGTGG+TGG | - | chr6_3:63885066-63885085 | None:intergenic | 60.0% | |
| CCTACTCCAAAGCCACCGTG+TGG | - | chr6_3:63885069-63885088 | None:intergenic | 60.0% | |
| !! | CCACACGGTGGCTTTGGAGT+AGG | + | chr6_3:63885066-63885085 | Msa0956520:CDS | 60.0% |
| !! | CGGTGGCTTTGGAGTAGGCT+TGG | + | chr6_3:63885071-63885090 | Msa0956520:CDS | 60.0% |
| GCAATCCTGAGTGGGTCACG+TGG | - | chr6_3:63885153-63885172 | None:intergenic | 60.0% | |
| ! | AGGTGGCGGCGGCAACTTCT+CGG | - | chr6_3:63881728-63881747 | None:intergenic | 65.0% |
| ! | CGATGTAGCAGAGGTGGCGG+CGG | - | chr6_3:63881739-63881758 | None:intergenic | 65.0% |
| AGACTCACGGCTGAGAGCGG+CGG | - | chr6_3:63882042-63882061 | None:intergenic | 65.0% | |
| GGTGACTGAGCCAGGCATGC+AGG | - | chr6_3:63882958-63882977 | None:intergenic | 65.0% | |
| !! | CAGCCAACGGGTACCGGTGA+AGG | - | chr6_3:63884522-63884541 | None:intergenic | 65.0% |
| TGGCGGCGGCAACTTCTCGG+CGG | - | chr6_3:63881725-63881744 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 63879205 | 63885690 | 63879205 | ID=Msa0956520;Name=Msa0956520 |
| chr6_3 | mRNA | 63879205 | 63885690 | 63879205 | ID=Msa0956520-mRNA-1;Parent=Msa0956520;Name=Msa0956520-mRNA-1;_AED=0.19;_eAED=0.19;_QI=134|1|1|1|0.9|0.81|11|511|541 |
| chr6_3 | exon | 63879205 | 63879330 | 63879205 | ID=Msa0956520-mRNA-1:exon:12214;Parent=Msa0956520-mRNA-1 |
| chr6_3 | exon | 63881610 | 63882124 | 63881610 | ID=Msa0956520-mRNA-1:exon:12215;Parent=Msa0956520-mRNA-1 |
| chr6_3 | exon | 63882255 | 63882365 | 63882255 | ID=Msa0956520-mRNA-1:exon:12216;Parent=Msa0956520-mRNA-1 |
| chr6_3 | exon | 63882584 | 63882697 | 63882584 | ID=Msa0956520-mRNA-1:exon:12217;Parent=Msa0956520-mRNA-1 |
| chr6_3 | exon | 63882841 | 63883131 | 63882841 | ID=Msa0956520-mRNA-1:exon:12218;Parent=Msa0956520-mRNA-1 |
| chr6_3 | exon | 63883225 | 63883335 | 63883225 | ID=Msa0956520-mRNA-1:exon:12219;Parent=Msa0956520-mRNA-1 |
| chr6_3 | exon | 63883506 | 63883559 | 63883506 | ID=Msa0956520-mRNA-1:exon:12220;Parent=Msa0956520-mRNA-1 |
| chr6_3 | exon | 63884321 | 63884400 | 63884321 | ID=Msa0956520-mRNA-1:exon:12221;Parent=Msa0956520-mRNA-1 |
| chr6_3 | exon | 63884498 | 63884613 | 63884498 | ID=Msa0956520-mRNA-1:exon:12222;Parent=Msa0956520-mRNA-1 |
| chr6_3 | exon | 63884794 | 63884908 | 63884794 | ID=Msa0956520-mRNA-1:exon:12223;Parent=Msa0956520-mRNA-1 |
| chr6_3 | exon | 63885053 | 63885690 | 63885053 | ID=Msa0956520-mRNA-1:exon:12224;Parent=Msa0956520-mRNA-1 |
| chr6_3 | five_prime_UTR | 63879205 | 63879330 | 63879205 | ID=Msa0956520-mRNA-1:five_prime_utr;Parent=Msa0956520-mRNA-1 |
| chr6_3 | five_prime_UTR | 63881610 | 63881617 | 63881610 | ID=Msa0956520-mRNA-1:five_prime_utr;Parent=Msa0956520-mRNA-1 |
| chr6_3 | CDS | 63881618 | 63882124 | 63881618 | ID=Msa0956520-mRNA-1:cds;Parent=Msa0956520-mRNA-1 |
| chr6_3 | CDS | 63882255 | 63882365 | 63882255 | ID=Msa0956520-mRNA-1:cds;Parent=Msa0956520-mRNA-1 |
| chr6_3 | CDS | 63882584 | 63882697 | 63882584 | ID=Msa0956520-mRNA-1:cds;Parent=Msa0956520-mRNA-1 |
| chr6_3 | CDS | 63882841 | 63883131 | 63882841 | ID=Msa0956520-mRNA-1:cds;Parent=Msa0956520-mRNA-1 |
| chr6_3 | CDS | 63883225 | 63883335 | 63883225 | ID=Msa0956520-mRNA-1:cds;Parent=Msa0956520-mRNA-1 |
| chr6_3 | CDS | 63883506 | 63883559 | 63883506 | ID=Msa0956520-mRNA-1:cds;Parent=Msa0956520-mRNA-1 |
| chr6_3 | CDS | 63884321 | 63884400 | 63884321 | ID=Msa0956520-mRNA-1:cds;Parent=Msa0956520-mRNA-1 |
| chr6_3 | CDS | 63884498 | 63884613 | 63884498 | ID=Msa0956520-mRNA-1:cds;Parent=Msa0956520-mRNA-1 |
| chr6_3 | CDS | 63884794 | 63884908 | 63884794 | ID=Msa0956520-mRNA-1:cds;Parent=Msa0956520-mRNA-1 |
| chr6_3 | CDS | 63885053 | 63885179 | 63885053 | ID=Msa0956520-mRNA-1:cds;Parent=Msa0956520-mRNA-1 |
| chr6_3 | three_prime_UTR | 63885180 | 63885690 | 63885180 | ID=Msa0956520-mRNA-1:three_prime_utr;Parent=Msa0956520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
