Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182630 | XP_022641619.1 | 63.462 | 260 | 76 | 4 | 1 | 246 | 1 | 255 | 9.45e-105 | 314 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182630 | sp|Q39173|P2_ARATH | 63.158 | 133 | 46 | 3 | 6 | 136 | 4 | 135 | 4.22e-52 | 175 |
| Msa1182630 | sp|Q39173|P2_ARATH | 64.957 | 117 | 41 | 0 | 130 | 246 | 227 | 343 | 3.80e-46 | 159 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036370 | Msa1182630 | 0.805656 | 1.201587e-49 | -8.615850e-47 |
| Msa0090030 | Msa1182630 | 0.832908 | 7.225677e-56 | -8.615850e-47 |
| Msa0099510 | Msa1182630 | 0.839961 | 1.158443e-57 | -8.615850e-47 |
| Msa0609970 | Msa1182630 | 0.834177 | 3.484687e-56 | -8.615850e-47 |
| Msa0614990 | Msa1182630 | 0.831215 | 1.894010e-55 | -8.615850e-47 |
| Msa0626680 | Msa1182630 | 0.821420 | 4.075511e-53 | -8.615850e-47 |
| Msa0650620 | Msa1182630 | 0.819559 | 1.089841e-52 | -8.615850e-47 |
| Msa0664760 | Msa1182630 | 0.822003 | 2.988649e-53 | -8.615850e-47 |
| Msa0791820 | Msa1182630 | 0.801024 | 1.094460e-48 | -8.615850e-47 |
| Msa0163560 | Msa1182630 | 0.803333 | 3.664241e-49 | -8.615850e-47 |
| Msa0198940 | Msa1182630 | 0.802131 | 6.488454e-49 | -8.615850e-47 |
| Msa0208810 | Msa1182630 | 0.843685 | 1.203695e-58 | -8.615850e-47 |
| Msa0212750 | Msa1182630 | -0.802251 | 6.129040e-49 | -8.615850e-47 |
| Msa0403190 | Msa1182630 | 0.813747 | 2.189107e-51 | -8.615850e-47 |
| Msa0404700 | Msa1182630 | 0.843848 | 1.088703e-58 | -8.615850e-47 |
| Msa0426810 | Msa1182630 | 0.814806 | 1.276799e-51 | -8.615850e-47 |
| Msa0449820 | Msa1182630 | 0.814843 | 1.253218e-51 | -8.615850e-47 |
| Msa0462540 | Msa1182630 | 0.839149 | 1.882816e-57 | -8.615850e-47 |
| Msa1087510 | Msa1182630 | -0.813663 | 2.283326e-51 | -8.615850e-47 |
| Msa0239940 | Msa1182630 | 0.825901 | 3.640152e-54 | -8.615850e-47 |
| Msa0266210 | Msa1182630 | 0.801616 | 8.278595e-49 | -8.615850e-47 |
| Msa0287670 | Msa1182630 | 0.807243 | 5.560067e-50 | -8.615850e-47 |
| Msa0288730 | Msa1182630 | 0.813554 | 2.413670e-51 | -8.615850e-47 |
| Msa0308200 | Msa1182630 | 0.806250 | 9.010522e-50 | -8.615850e-47 |
| Msa0308220 | Msa1182630 | 0.826424 | 2.733954e-54 | -8.615850e-47 |
| Msa0362060 | Msa1182630 | 0.827131 | 1.853143e-54 | -8.615850e-47 |
| Msa0363170 | Msa1182630 | 0.832144 | 1.117792e-55 | -8.615850e-47 |
| Msa1129400 | Msa1182630 | 0.815610 | 8.464414e-52 | -8.615850e-47 |
| Msa1182630 | Msa1182640 | 0.844948 | 5.509238e-59 | -8.615850e-47 |
| Msa1182630 | Msa1211050 | -0.821679 | 3.550955e-53 | -8.615850e-47 |
| Msa1182630 | Msa1229850 | 0.802894 | 4.516547e-49 | -8.615850e-47 |
| Msa1182630 | Msa1272520 | 0.807507 | 4.885978e-50 | -8.615850e-47 |
| Msa1182630 | Msa1310660 | 0.822662 | 2.101374e-53 | -8.615850e-47 |
| Msa1182630 | Msa1340830 | 0.804493 | 2.104222e-49 | -8.615850e-47 |
| Msa1182630 | Msa1350690 | 0.805918 | 1.058680e-49 | -8.615850e-47 |
| Msa1182630 | Msa1363700 | 0.808858 | 2.519020e-50 | -8.615850e-47 |
| Msa1182630 | Msa1398860 | 0.805775 | 1.134045e-49 | -8.615850e-47 |
| Msa0578090 | Msa1182630 | 0.832988 | 6.904828e-56 | -8.615850e-47 |
| Msa0579370 | Msa1182630 | 0.803939 | 2.743921e-49 | -8.615850e-47 |
| Msa0586850 | Msa1182630 | 0.810343 | 1.208208e-50 | -8.615850e-47 |
| Msa0895310 | Msa1182630 | 0.832233 | 1.062789e-55 | -8.615850e-47 |
| Msa0944730 | Msa1182630 | 0.834432 | 3.008438e-56 | -8.615850e-47 |
| Msa0956520 | Msa1182630 | -0.804789 | 1.824713e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182630 | MtrunA17_Chr8g0337471 | 95.588 | 136 | 6 | 0 | 1 | 136 | 1 | 136 | 4.25e-91 | 272 |
| Msa1182630 | MtrunA17_Chr8g0337471 | 67.361 | 144 | 43 | 2 | 103 | 246 | 205 | 344 | 1.30e-61 | 197 |
| Msa1182630 | MtrunA17_Chr8g0337451 | 82.069 | 145 | 22 | 2 | 102 | 246 | 204 | 344 | 3.22e-76 | 234 |
| Msa1182630 | MtrunA17_Chr8g0337451 | 72.993 | 137 | 35 | 2 | 1 | 136 | 1 | 136 | 3.57e-67 | 211 |
| Msa1182630 | MtrunA17_Chr8g0337491 | 72.789 | 147 | 29 | 1 | 1 | 136 | 1 | 147 | 2.98e-70 | 221 |
| Msa1182630 | MtrunA17_Chr8g0337491 | 68.531 | 143 | 41 | 2 | 102 | 244 | 215 | 353 | 5.27e-62 | 200 |
| Msa1182630 | MtrunA17_Chr8g0337491 | 92.593 | 54 | 4 | 0 | 1 | 54 | 367 | 420 | 1.62e-26 | 106 |
| Msa1182630 | MtrunA17_Chr8g0335881 | 71.533 | 137 | 36 | 2 | 1 | 136 | 1 | 135 | 2.77e-65 | 202 |
| Msa1182630 | MtrunA17_Chr8g0337481 | 68.750 | 144 | 41 | 2 | 103 | 246 | 146 | 285 | 1.31e-63 | 200 |
| Msa1182630 | MtrunA17_Chr8g0337481 | 93.506 | 77 | 5 | 0 | 60 | 136 | 1 | 77 | 2.80e-46 | 155 |
| Msa1182630 | MtrunA17_Chr8g0337361 | 71.533 | 137 | 36 | 2 | 1 | 136 | 60 | 194 | 9.51e-63 | 201 |
| Msa1182630 | MtrunA17_Chr8g0337361 | 69.504 | 141 | 39 | 2 | 106 | 246 | 266 | 402 | 7.13e-60 | 194 |
| Msa1182630 | MtrunA17_Chr8g0337371 | 72.993 | 137 | 33 | 3 | 1 | 136 | 496 | 629 | 4.92e-58 | 197 |
| Msa1182630 | MtrunA17_Chr8g0337371 | 81.197 | 117 | 22 | 0 | 130 | 246 | 721 | 837 | 6.47e-57 | 194 |
| Msa1182630 | MtrunA17_Chr8g0337371 | 70.073 | 137 | 37 | 3 | 1 | 136 | 49 | 182 | 1.52e-56 | 193 |
| Msa1182630 | MtrunA17_Chr8g0337371 | 71.852 | 135 | 34 | 2 | 106 | 240 | 254 | 384 | 4.14e-54 | 186 |
| Msa1182630 | MtrunA17_Chr4g0043061 | 63.248 | 117 | 43 | 0 | 130 | 246 | 234 | 350 | 3.41e-46 | 157 |
| Msa1182630 | MtrunA17_Chr4g0043061 | 56.391 | 133 | 56 | 2 | 4 | 135 | 10 | 141 | 1.13e-41 | 145 |
| Msa1182630 | MtrunA17_Chr7g0214831 | 37.786 | 262 | 141 | 6 | 3 | 246 | 89 | 346 | 3.07e-42 | 147 |
| Msa1182630 | MtrunA17_Chr7g0214831 | 43.066 | 137 | 76 | 2 | 1 | 136 | 3 | 138 | 1.59e-27 | 107 |
| Msa1182630 | MtrunA17_Chr5g0445921 | 50.435 | 115 | 57 | 0 | 130 | 244 | 22 | 136 | 2.90e-37 | 127 |
| Msa1182630 | MtrunA17_Chr2g0307121 | 38.462 | 117 | 72 | 0 | 130 | 246 | 230 | 346 | 1.53e-23 | 97.1 |
| Msa1182630 | MtrunA17_Chr2g0307121 | 32.609 | 138 | 88 | 2 | 3 | 136 | 2 | 138 | 2.94e-18 | 82.4 |
| Msa1182630 | MtrunA17_Chr2g0322531 | 38.793 | 116 | 69 | 1 | 130 | 243 | 232 | 347 | 1.34e-16 | 77.8 |
| Msa1182630 | MtrunA17_Chr2g0322551 | 39.362 | 94 | 55 | 1 | 130 | 221 | 233 | 326 | 2.52e-14 | 71.6 |
| Msa1182630 | MtrunA17_Chr2g0322541 | 37.234 | 94 | 57 | 1 | 130 | 221 | 233 | 326 | 6.80e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182630 | AT5G17000.2 | 61.940 | 134 | 47 | 3 | 6 | 136 | 5 | 137 | 1.22e-53 | 174 |
| Msa1182630 | AT5G16990.1 | 63.158 | 133 | 46 | 3 | 6 | 136 | 4 | 135 | 4.29e-53 | 175 |
| Msa1182630 | AT5G16990.1 | 64.957 | 117 | 41 | 0 | 130 | 246 | 227 | 343 | 3.86e-47 | 159 |
| Msa1182630 | AT5G16970.1 | 61.194 | 134 | 48 | 3 | 6 | 136 | 5 | 137 | 2.28e-52 | 173 |
| Msa1182630 | AT5G16970.1 | 65.812 | 117 | 40 | 0 | 130 | 246 | 229 | 345 | 1.40e-48 | 163 |
| Msa1182630 | AT5G17000.1 | 61.940 | 134 | 47 | 3 | 6 | 136 | 5 | 137 | 2.77e-52 | 173 |
| Msa1182630 | AT5G17000.1 | 64.957 | 117 | 41 | 0 | 130 | 246 | 229 | 345 | 8.61e-48 | 161 |
| Msa1182630 | AT5G37980.1 | 60.284 | 141 | 52 | 2 | 106 | 246 | 217 | 353 | 6.41e-52 | 172 |
| Msa1182630 | AT5G37980.1 | 55.882 | 136 | 53 | 4 | 6 | 136 | 12 | 145 | 6.59e-43 | 149 |
| Msa1182630 | AT3G03080.1 | 61.594 | 138 | 48 | 3 | 2 | 136 | 7 | 142 | 2.29e-50 | 168 |
| Msa1182630 | AT3G03080.1 | 65.812 | 117 | 40 | 0 | 130 | 246 | 234 | 350 | 4.34e-49 | 165 |
| Msa1182630 | AT1G26320.2 | 56.738 | 141 | 57 | 2 | 106 | 246 | 210 | 346 | 1.64e-49 | 166 |
| Msa1182630 | AT1G26320.2 | 59.559 | 136 | 51 | 3 | 4 | 136 | 9 | 143 | 3.77e-46 | 157 |
| Msa1182630 | AT1G26320.1 | 56.738 | 141 | 57 | 2 | 106 | 246 | 215 | 351 | 1.89e-49 | 166 |
| Msa1182630 | AT1G26320.1 | 59.559 | 136 | 51 | 3 | 4 | 136 | 9 | 143 | 3.97e-46 | 157 |
| Msa1182630 | AT5G37940.1 | 58.156 | 141 | 55 | 2 | 106 | 246 | 217 | 353 | 7.22e-49 | 164 |
| Msa1182630 | AT5G37940.1 | 54.815 | 135 | 56 | 3 | 6 | 136 | 12 | 145 | 1.88e-42 | 147 |
| Msa1182630 | AT5G16960.2 | 58.273 | 139 | 54 | 2 | 106 | 244 | 210 | 344 | 1.48e-48 | 163 |
| Msa1182630 | AT5G16960.2 | 55.396 | 139 | 58 | 3 | 1 | 136 | 1 | 138 | 1.85e-45 | 155 |
| Msa1182630 | AT5G16960.1 | 58.273 | 139 | 54 | 2 | 106 | 244 | 210 | 344 | 1.48e-48 | 163 |
| Msa1182630 | AT5G16960.1 | 55.396 | 139 | 58 | 3 | 1 | 136 | 1 | 138 | 1.85e-45 | 155 |
| Msa1182630 | AT5G16980.1 | 63.248 | 117 | 43 | 0 | 130 | 246 | 123 | 239 | 1.50e-48 | 160 |
| Msa1182630 | AT5G16980.3 | 63.248 | 117 | 43 | 0 | 130 | 246 | 123 | 239 | 1.50e-48 | 160 |
| Msa1182630 | AT5G38000.2 | 57.143 | 140 | 56 | 2 | 106 | 245 | 198 | 333 | 3.55e-48 | 162 |
| Msa1182630 | AT5G38000.2 | 53.957 | 139 | 57 | 4 | 6 | 139 | 12 | 148 | 3.91e-43 | 149 |
| Msa1182630 | AT5G38000.1 | 57.143 | 140 | 56 | 2 | 106 | 245 | 217 | 352 | 7.64e-48 | 162 |
| Msa1182630 | AT5G38000.1 | 54.412 | 136 | 55 | 4 | 6 | 136 | 12 | 145 | 6.93e-42 | 146 |
| Msa1182630 | AT5G16980.2 | 63.248 | 117 | 43 | 0 | 130 | 246 | 189 | 305 | 9.55e-48 | 160 |
| Msa1182630 | AT3G59845.2 | 62.609 | 115 | 43 | 0 | 130 | 244 | 130 | 244 | 1.38e-44 | 150 |
| Msa1182630 | AT3G59845.1 | 62.609 | 115 | 43 | 0 | 130 | 244 | 232 | 346 | 1.53e-43 | 150 |
| Msa1182630 | AT3G59845.1 | 51.449 | 138 | 60 | 5 | 4 | 136 | 5 | 140 | 4.07e-37 | 134 |
| Msa1182630 | AT5G38000.3 | 54.412 | 136 | 55 | 4 | 6 | 136 | 12 | 145 | 7.08e-42 | 146 |
| Msa1182630 | AT5G38000.3 | 53.333 | 135 | 56 | 3 | 106 | 237 | 217 | 347 | 1.32e-40 | 143 |
| Msa1182630 | AT1G65560.2 | 50.704 | 142 | 65 | 3 | 106 | 246 | 137 | 274 | 1.79e-36 | 130 |
| Msa1182630 | AT1G65560.1 | 50.704 | 142 | 65 | 3 | 106 | 246 | 213 | 350 | 1.22e-35 | 130 |
| Msa1182630 | AT1G65560.1 | 47.445 | 137 | 66 | 4 | 4 | 136 | 7 | 141 | 5.92e-31 | 117 |
| Msa1182630 | AT5G37960.1 | 50.667 | 75 | 37 | 0 | 167 | 241 | 27 | 101 | 1.88e-18 | 78.6 |
Find 58 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCCAAGAATTTAGGATTT+AGG | 0.194891 | 8_1:+17741165 | None:intergenic |
| TCACCTAAATCCTAAATTCT+TGG | 0.229492 | 8_1:-17741168 | Msa1182630:CDS |
| ACCTGAACCTGTAACGAATT+TGG | 0.245348 | 8_1:-17741246 | Msa1182630:CDS |
| GCCAAATTCGTTACAGGTTC+AGG | 0.246307 | 8_1:+17741245 | None:intergenic |
| AGGACAAACTCCAAGAATTT+AGG | 0.263093 | 8_1:+17741158 | None:intergenic |
| CGTGGATTGATAGATGCTTT+TGG | 0.268838 | 8_1:+17742550 | None:intergenic |
| TCCTACTATACTGGAGTTCT+AGG | 0.294178 | 8_1:-17741750 | Msa1182630:intron |
| TTTCAGCCGTTAACTGGTTA+TGG | 0.313356 | 8_1:-17741912 | Msa1182630:intron |
| AGATGTGCCAAATTCGTTAC+AGG | 0.319604 | 8_1:+17741239 | None:intergenic |
| ACAACATCGTTGGAACCTTC+TGG | 0.323062 | 8_1:+17742631 | None:intergenic |
| ATCTGAACACAAAGATTATA+AGG | 0.335851 | 8_1:-17741871 | Msa1182630:CDS |
| TCGTAATTTCAGCCGTTAAC+TGG | 0.342310 | 8_1:-17741918 | Msa1182630:intron |
| ATGTTGAGGTCTGATTCTTT+AGG | 0.350907 | 8_1:+17742682 | None:intergenic |
| CTTCTGAAACATTATGTGTC+TGG | 0.389777 | 8_1:-17742709 | Msa1182630:CDS |
| GTTCCTCTTTCCTACTATAC+TGG | 0.394850 | 8_1:-17741759 | Msa1182630:CDS |
| TTCTGGAATCTTAAGAGTTA+TGG | 0.398031 | 8_1:+17742648 | None:intergenic |
| GACACACCATAACCAGTTAA+CGG | 0.422138 | 8_1:+17741906 | None:intergenic |
| AGCCATAAACTTACAGATTG+AGG | 0.442715 | 8_1:+17742517 | None:intergenic |
| AGGTTCCAACGATGTTGTAT+TGG | 0.452549 | 8_1:-17742626 | Msa1182630:CDS |
| AATGGTCCTGCAGCATTGAT+TGG | 0.469066 | 8_1:-17741077 | Msa1182630:CDS |
| TTTAACCAATACAACATCGT+TGG | 0.470295 | 8_1:+17742621 | None:intergenic |
| CAACATTGCGACCACTATAC+AGG | 0.474009 | 8_1:+17741054 | None:intergenic |
| CTCATAAGAGTCCTCATGTA+AGG | 0.474115 | 8_1:+17742577 | None:intergenic |
| CACAAGCAGGTATGCGGCCA+TGG | 0.491073 | 8_1:+17741297 | None:intergenic |
| TTGAAATGTATTTGAGCCGC+AGG | 0.496347 | 8_1:+17741798 | None:intergenic |
| ACCTAGAACTCCAGTATAGT+AGG | 0.498495 | 8_1:+17741749 | None:intergenic |
| TAAGGAAGGTGATATAGTGT+GGG | 0.522542 | 8_1:-17741853 | Msa1182630:CDS |
| ATAACTGAGGGTCTTGAGAA+TGG | 0.532568 | 8_1:-17741095 | Msa1182630:CDS |
| ATAAGGAAGGTGATATAGTG+TGG | 0.533080 | 8_1:-17741854 | Msa1182630:CDS |
| ACTTACAGATTGAGGAACAT+AGG | 0.548541 | 8_1:+17742525 | None:intergenic |
| TACAGGCCAATCAATGCTGC+AGG | 0.549132 | 8_1:+17741071 | None:intergenic |
| TCCTCCCTCATATCAGAGAC+GGG | 0.552336 | 8_1:-17741139 | Msa1182630:CDS |
| GTCCTCCCTCATATCAGAGA+CGG | 0.557651 | 8_1:-17741140 | Msa1182630:CDS |
| GAACACAAAGATTATAAGGA+AGG | 0.565010 | 8_1:-17741867 | Msa1182630:CDS |
| CATATATAAGCGGATTCGAA+TGG | 0.569235 | 8_1:-17741216 | Msa1182630:CDS |
| GCATTGATTGGCCTGTATAG+TGG | 0.570454 | 8_1:-17741065 | Msa1182630:CDS |
| CTTCTGAATATGAGAGTCCA+TGG | 0.570985 | 8_1:-17741314 | Msa1182630:CDS |
| CTGTATAGTGGTCGCAATGT+TGG | 0.571188 | 8_1:-17741053 | Msa1182630:CDS |
| ACTCCAGTATAGTAGGAAAG+AGG | 0.571694 | 8_1:+17741756 | None:intergenic |
| TATAAGCGGATTCGAATGGA+AGG | 0.574885 | 8_1:-17741212 | Msa1182630:CDS |
| TGTGAGATCATTCCACAAGC+AGG | 0.587370 | 8_1:+17741284 | None:intergenic |
| TTATGGTGTGTCTAAAGTTG+TGG | 0.587703 | 8_1:-17741895 | Msa1182630:CDS |
| CATGGCCGCATACCTGCTTG+TGG | 0.591190 | 8_1:-17741296 | Msa1182630:CDS |
| ATAACTCTTAAGATTCCAGA+AGG | 0.595274 | 8_1:-17742646 | Msa1182630:CDS |
| AAGGAAGGTGATATAGTGTG+GGG | 0.603651 | 8_1:-17741852 | Msa1182630:CDS |
| TGGCACATCTCATATATAAG+CGG | 0.622685 | 8_1:-17741226 | Msa1182630:CDS |
| TGGTACTGTCAACAATGTTG+AGG | 0.627893 | 8_1:+17742668 | None:intergenic |
| TCCCGTCTCTGATATGAGGG+AGG | 0.638712 | 8_1:+17741138 | None:intergenic |
| TGAAATGTATTTGAGCCGCA+GGG | 0.641592 | 8_1:+17741799 | None:intergenic |
| TCATTCCACAAGCAGGTATG+CGG | 0.655597 | 8_1:+17741291 | None:intergenic |
| AGGAAGGTGATATAGTGTGG+GGG | 0.659217 | 8_1:-17741851 | Msa1182630:CDS |
| TGTCTTGTGATCCTTACATG+AGG | 0.664048 | 8_1:-17742588 | Msa1182630:CDS |
| ATAAGCGGATTCGAATGGAA+GGG | 0.669316 | 8_1:-17741211 | Msa1182630:CDS |
| TCGCAATGTTGGTAAACAAG+TGG | 0.707437 | 8_1:-17741042 | Msa1182630:CDS |
| TATGTTGAAGACATAACTGA+GGG | 0.741574 | 8_1:-17741107 | Msa1182630:CDS |
| GATTGAGGAACATAGGCACG+TGG | 0.744035 | 8_1:+17742532 | None:intergenic |
| AGAGTACAGCTTGATCCCTG+CGG | 0.754975 | 8_1:-17741814 | Msa1182630:CDS |
| GTATGTTGAAGACATAACTG+AGG | 0.767481 | 8_1:-17741108 | Msa1182630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATTGAAAAATATTAATAT+AGG | + | chr8_1:17742214-17742233 | None:intergenic | 10.0% |
| !! | CAATTGAAAAATATTAATAT+AGG | + | chr8_1:17742214-17742233 | None:intergenic | 10.0% |
| !! | ATATAAAAAACTCTACTTTA+AGG | + | chr8_1:17741297-17741316 | None:intergenic | 15.0% |
| !!! | AGAGTTTTTTATATGTAAAT+TGG | - | chr8_1:17741303-17741322 | Msa1182630:CDS | 15.0% |
| !!! | TAGGTTTACAATTTTAATTT+TGG | - | chr8_1:17741358-17741377 | Msa1182630:intron | 15.0% |
| !! | ATATAAAAAACTCTACTTTA+AGG | + | chr8_1:17741297-17741316 | None:intergenic | 15.0% |
| !!! | AGAGTTTTTTATATGTAAAT+TGG | - | chr8_1:17741303-17741322 | Msa1182630:CDS | 15.0% |
| !!! | TAGGTTTACAATTTTAATTT+TGG | - | chr8_1:17741358-17741377 | Msa1182630:intron | 15.0% |
| !! | AATTTGACAAATACTGAAAA+GGG | + | chr8_1:17741271-17741290 | None:intergenic | 20.0% |
| !! | TAATTTGACAAATACTGAAA+AGG | + | chr8_1:17741272-17741291 | None:intergenic | 20.0% |
| !!! | AAGAATAATTTGCTAAGAAA+TGG | + | chr8_1:17741390-17741409 | None:intergenic | 20.0% |
| !! | ACATGTGTTAAAGAAAAAAA+AGG | - | chr8_1:17741583-17741602 | Msa1182630:intron | 20.0% |
| !! | CATGTGTTAAAGAAAAAAAA+GGG | - | chr8_1:17741584-17741603 | Msa1182630:intron | 20.0% |
| !! | CATAGAAAATTATGTTTCTT+TGG | - | chr8_1:17741674-17741693 | Msa1182630:intron | 20.0% |
| !!! | TATTTTTGTTGAGAATTTGA+AGG | - | chr8_1:17741705-17741724 | Msa1182630:intron | 20.0% |
| !! | AAAAACATCATAATAACTTG+AGG | + | chr8_1:17742084-17742103 | None:intergenic | 20.0% |
| !! | TATCATCAGTTTCAAATAAA+AGG | + | chr8_1:17742276-17742295 | None:intergenic | 20.0% |
| !!! | NATATTTACTTTGAGAATGT+TGG | - | chr8_1:17742399-17742418 | Msa1182630:intron | 20.0% |
| !! | AATTTGACAAATACTGAAAA+GGG | + | chr8_1:17741271-17741290 | None:intergenic | 20.0% |
| !! | TAATTTGACAAATACTGAAA+AGG | + | chr8_1:17741272-17741291 | None:intergenic | 20.0% |
| !!! | AAGAATAATTTGCTAAGAAA+TGG | + | chr8_1:17741390-17741409 | None:intergenic | 20.0% |
| !! | ACATGTGTTAAAGAAAAAAA+AGG | - | chr8_1:17741583-17741602 | Msa1182630:intron | 20.0% |
| !! | CATGTGTTAAAGAAAAAAAA+GGG | - | chr8_1:17741584-17741603 | Msa1182630:intron | 20.0% |
| !! | CATAGAAAATTATGTTTCTT+TGG | - | chr8_1:17741674-17741693 | Msa1182630:intron | 20.0% |
| !!! | TATTTTTGTTGAGAATTTGA+AGG | - | chr8_1:17741705-17741724 | Msa1182630:intron | 20.0% |
| !! | AAAAACATCATAATAACTTG+AGG | + | chr8_1:17742084-17742103 | None:intergenic | 20.0% |
| !! | TATCATCAGTTTCAAATAAA+AGG | + | chr8_1:17742276-17742295 | None:intergenic | 20.0% |
| !!! | NATATTTACTTTGAGAATGT+TGG | - | chr8_1:17742399-17742418 | Msa1182630:intron | 20.0% |
| !! | AAATTGGTCTCTTCATTATA+TGG | - | chr8_1:17741319-17741338 | Msa1182630:CDS | 25.0% |
| !! | AATTGGTCTCTTCATTATAT+GGG | - | chr8_1:17741320-17741339 | Msa1182630:CDS | 25.0% |
| ! | TTCTAGTCAATTTACAAACT+CGG | - | chr8_1:17741518-17741537 | Msa1182630:intron | 25.0% |
| ! | AGAAAATTATGTTTCTTTGG+TGG | - | chr8_1:17741677-17741696 | Msa1182630:intron | 25.0% |
| ! | GAAAATTATGTTTCTTTGGT+GGG | - | chr8_1:17741678-17741697 | Msa1182630:intron | 25.0% |
| ! | ATCTGAACACAAAGATTATA+AGG | - | chr8_1:17741887-17741906 | Msa1182630:CDS | 25.0% |
| ! | TGTATGATTATAGAGAAGAA+TGG | - | chr8_1:17742033-17742052 | Msa1182630:intron | 25.0% |
| !! | AAATTGGTCTCTTCATTATA+TGG | - | chr8_1:17741319-17741338 | Msa1182630:CDS | 25.0% |
| !! | AATTGGTCTCTTCATTATAT+GGG | - | chr8_1:17741320-17741339 | Msa1182630:CDS | 25.0% |
| ! | TTCTAGTCAATTTACAAACT+CGG | - | chr8_1:17741518-17741537 | Msa1182630:intron | 25.0% |
| ! | AGAAAATTATGTTTCTTTGG+TGG | - | chr8_1:17741677-17741696 | Msa1182630:intron | 25.0% |
| ! | GAAAATTATGTTTCTTTGGT+GGG | - | chr8_1:17741678-17741697 | Msa1182630:intron | 25.0% |
| ! | ATCTGAACACAAAGATTATA+AGG | - | chr8_1:17741887-17741906 | Msa1182630:CDS | 25.0% |
| ! | TGTATGATTATAGAGAAGAA+TGG | - | chr8_1:17742033-17742052 | Msa1182630:intron | 25.0% |
| !! | TTCTGGAATCTTAAGAGTTA+TGG | + | chr8_1:17741113-17741132 | None:intergenic | 30.0% |
| ATAACTCTTAAGATTCCAGA+AGG | - | chr8_1:17741112-17741131 | Msa1182630:CDS | 30.0% | |
| TTTAACCAATACAACATCGT+TGG | + | chr8_1:17741140-17741159 | None:intergenic | 30.0% | |
| TTCCTCAATCTGTAAGTTTA+TGG | - | chr8_1:17741239-17741258 | Msa1182630:CDS | 30.0% | |
| !! | TGGGTCAATTTGTTATTAGT+AGG | - | chr8_1:17741339-17741358 | Msa1182630:intron | 30.0% |
| !!! | TGTTTTAACTCTCTAGTTCT+TGG | - | chr8_1:17741433-17741452 | Msa1182630:intron | 30.0% |
| ATTTACAAACTCGGATTCTT+TGG | - | chr8_1:17741527-17741546 | Msa1182630:intron | 30.0% | |
| ! | TTGGAAAATTGGAACCATTT+TGG | - | chr8_1:17741546-17741565 | Msa1182630:intron | 30.0% |
| ACACAAATTAGTCACCAAAA+TGG | + | chr8_1:17741563-17741582 | None:intergenic | 30.0% | |
| GAACACAAAGATTATAAGGA+AGG | - | chr8_1:17741891-17741910 | Msa1182630:CDS | 30.0% | |
| TTGTTTAGTATCGTTACAGA+CGG | - | chr8_1:17742126-17742145 | Msa1182630:intron | 30.0% | |
| AAACAACTCTTTCACACAAT+AGG | + | chr8_1:17742172-17742191 | None:intergenic | 30.0% | |
| TGTCTTATCTTGTTCAACAA+AGG | - | chr8_1:17742232-17742251 | Msa1182630:intron | 30.0% | |
| CTTGTTCAACAAAGGATATA+CGG | - | chr8_1:17742240-17742259 | Msa1182630:intron | 30.0% | |
| ! | ATTTACTTTGAGAATGTTGG+AGG | - | chr8_1:17742402-17742421 | Msa1182630:intron | 30.0% |
| TCACCTAAATCCTAAATTCT+TGG | - | chr8_1:17742590-17742609 | Msa1182630:CDS | 30.0% | |
| ! | ACTCCAAGAATTTAGGATTT+AGG | + | chr8_1:17742596-17742615 | None:intergenic | 30.0% |
| TATGTTGAAGACATAACTGA+GGG | - | chr8_1:17742651-17742670 | Msa1182630:CDS | 30.0% | |
| !! | TTCTGGAATCTTAAGAGTTA+TGG | + | chr8_1:17741113-17741132 | None:intergenic | 30.0% |
| ATAACTCTTAAGATTCCAGA+AGG | - | chr8_1:17741112-17741131 | Msa1182630:CDS | 30.0% | |
| TTTAACCAATACAACATCGT+TGG | + | chr8_1:17741140-17741159 | None:intergenic | 30.0% | |
| TTCCTCAATCTGTAAGTTTA+TGG | - | chr8_1:17741239-17741258 | Msa1182630:CDS | 30.0% | |
| !! | TGGGTCAATTTGTTATTAGT+AGG | - | chr8_1:17741339-17741358 | Msa1182630:intron | 30.0% |
| !!! | TGTTTTAACTCTCTAGTTCT+TGG | - | chr8_1:17741433-17741452 | Msa1182630:intron | 30.0% |
| ATTTACAAACTCGGATTCTT+TGG | - | chr8_1:17741527-17741546 | Msa1182630:intron | 30.0% | |
| ! | TTGGAAAATTGGAACCATTT+TGG | - | chr8_1:17741546-17741565 | Msa1182630:intron | 30.0% |
| ACACAAATTAGTCACCAAAA+TGG | + | chr8_1:17741563-17741582 | None:intergenic | 30.0% | |
| GAACACAAAGATTATAAGGA+AGG | - | chr8_1:17741891-17741910 | Msa1182630:CDS | 30.0% | |
| TTGTTTAGTATCGTTACAGA+CGG | - | chr8_1:17742126-17742145 | Msa1182630:intron | 30.0% | |
| AAACAACTCTTTCACACAAT+AGG | + | chr8_1:17742172-17742191 | None:intergenic | 30.0% | |
| TGTCTTATCTTGTTCAACAA+AGG | - | chr8_1:17742232-17742251 | Msa1182630:intron | 30.0% | |
| CTTGTTCAACAAAGGATATA+CGG | - | chr8_1:17742240-17742259 | Msa1182630:intron | 30.0% | |
| ! | ATTTACTTTGAGAATGTTGG+AGG | - | chr8_1:17742402-17742421 | Msa1182630:intron | 30.0% |
| TCACCTAAATCCTAAATTCT+TGG | - | chr8_1:17742590-17742609 | Msa1182630:CDS | 30.0% | |
| ! | ACTCCAAGAATTTAGGATTT+AGG | + | chr8_1:17742596-17742615 | None:intergenic | 30.0% |
| TATGTTGAAGACATAACTGA+GGG | - | chr8_1:17742651-17742670 | Msa1182630:CDS | 30.0% | |
| !! | CTTCTGAAACATTATGTGTC+TGG | - | chr8_1:17741049-17741068 | Msa1182630:CDS | 35.0% |
| ATGTTGAGGTCTGATTCTTT+AGG | + | chr8_1:17741079-17741098 | None:intergenic | 35.0% | |
| !! | GTGGATTGATAGATGCTTTT+GGG | + | chr8_1:17741210-17741229 | None:intergenic | 35.0% |
| ACTTACAGATTGAGGAACAT+AGG | + | chr8_1:17741236-17741255 | None:intergenic | 35.0% | |
| AGCCATAAACTTACAGATTG+AGG | + | chr8_1:17741244-17741263 | None:intergenic | 35.0% | |
| ! | ACTCGGATTCTTTGGAAAAT+TGG | - | chr8_1:17741535-17741554 | Msa1182630:intron | 35.0% |
| ! | TTATGGTGTGTCTAAAGTTG+TGG | - | chr8_1:17741863-17741882 | Msa1182630:CDS | 35.0% |
| ATAAGGAAGGTGATATAGTG+TGG | - | chr8_1:17741904-17741923 | Msa1182630:CDS | 35.0% | |
| TAAGGAAGGTGATATAGTGT+GGG | - | chr8_1:17741905-17741924 | Msa1182630:CDS | 35.0% | |
| TGTTTAGTATCGTTACAGAC+GGG | - | chr8_1:17742127-17742146 | Msa1182630:intron | 35.0% | |
| ACAATAGGTTTCTATCCTGA+TGG | + | chr8_1:17742157-17742176 | None:intergenic | 35.0% | |
| GAAAGAGTTGTTTGTTTGTC+TGG | - | chr8_1:17742179-17742198 | Msa1182630:intron | 35.0% | |
| TGGCACATCTCATATATAAG+CGG | - | chr8_1:17742532-17742551 | Msa1182630:CDS | 35.0% | |
| ! | CATATATAAGCGGATTCGAA+TGG | - | chr8_1:17742542-17742561 | Msa1182630:CDS | 35.0% |
| AGGACAAACTCCAAGAATTT+AGG | + | chr8_1:17742603-17742622 | None:intergenic | 35.0% | |
| GTATGTTGAAGACATAACTG+AGG | - | chr8_1:17742650-17742669 | Msa1182630:CDS | 35.0% | |
| !! | CTTCTGAAACATTATGTGTC+TGG | - | chr8_1:17741049-17741068 | Msa1182630:CDS | 35.0% |
| ATGTTGAGGTCTGATTCTTT+AGG | + | chr8_1:17741079-17741098 | None:intergenic | 35.0% | |
| !! | GTGGATTGATAGATGCTTTT+GGG | + | chr8_1:17741210-17741229 | None:intergenic | 35.0% |
| ACTTACAGATTGAGGAACAT+AGG | + | chr8_1:17741236-17741255 | None:intergenic | 35.0% | |
| AGCCATAAACTTACAGATTG+AGG | + | chr8_1:17741244-17741263 | None:intergenic | 35.0% | |
| ! | ACTCGGATTCTTTGGAAAAT+TGG | - | chr8_1:17741535-17741554 | Msa1182630:intron | 35.0% |
| ! | TTATGGTGTGTCTAAAGTTG+TGG | - | chr8_1:17741863-17741882 | Msa1182630:CDS | 35.0% |
| ATAAGGAAGGTGATATAGTG+TGG | - | chr8_1:17741904-17741923 | Msa1182630:CDS | 35.0% | |
| TAAGGAAGGTGATATAGTGT+GGG | - | chr8_1:17741905-17741924 | Msa1182630:CDS | 35.0% | |
| TGTTTAGTATCGTTACAGAC+GGG | - | chr8_1:17742127-17742146 | Msa1182630:intron | 35.0% | |
| ACAATAGGTTTCTATCCTGA+TGG | + | chr8_1:17742157-17742176 | None:intergenic | 35.0% | |
| GAAAGAGTTGTTTGTTTGTC+TGG | - | chr8_1:17742179-17742198 | Msa1182630:intron | 35.0% | |
| TGGCACATCTCATATATAAG+CGG | - | chr8_1:17742532-17742551 | Msa1182630:CDS | 35.0% | |
| ! | CATATATAAGCGGATTCGAA+TGG | - | chr8_1:17742542-17742561 | Msa1182630:CDS | 35.0% |
| AGGACAAACTCCAAGAATTT+AGG | + | chr8_1:17742603-17742622 | None:intergenic | 35.0% | |
| GTATGTTGAAGACATAACTG+AGG | - | chr8_1:17742650-17742669 | Msa1182630:CDS | 35.0% | |
| TGGTACTGTCAACAATGTTG+AGG | + | chr8_1:17741093-17741112 | None:intergenic | 40.0% | |
| AGGTTCCAACGATGTTGTAT+TGG | - | chr8_1:17741132-17741151 | Msa1182630:CDS | 40.0% | |
| TGTCTTGTGATCCTTACATG+AGG | - | chr8_1:17741170-17741189 | Msa1182630:CDS | 40.0% | |
| CTCATAAGAGTCCTCATGTA+AGG | + | chr8_1:17741184-17741203 | None:intergenic | 40.0% | |
| !! | CGTGGATTGATAGATGCTTT+TGG | + | chr8_1:17741211-17741230 | None:intergenic | 40.0% |
| TGTCCTAGTAATCCGCAATT+TGG | - | chr8_1:17741463-17741482 | Msa1182630:intron | 40.0% | |
| ! | TGAGAATTTGAAGGAAGTGC+TGG | - | chr8_1:17741714-17741733 | Msa1182630:intron | 40.0% |
| TCGTAATTTCAGCCGTTAAC+TGG | - | chr8_1:17741840-17741859 | Msa1182630:CDS | 40.0% | |
| TTTCAGCCGTTAACTGGTTA+TGG | - | chr8_1:17741846-17741865 | Msa1182630:CDS | 40.0% | |
| GACACACCATAACCAGTTAA+CGG | + | chr8_1:17741855-17741874 | None:intergenic | 40.0% | |
| AAGGAAGGTGATATAGTGTG+GGG | - | chr8_1:17741906-17741925 | Msa1182630:CDS | 40.0% | |
| TAGTGTGGGGGATAACTAAT+AGG | - | chr8_1:17741919-17741938 | Msa1182630:intron | 40.0% | |
| AGTGTGGGGGATAACTAATA+GGG | - | chr8_1:17741920-17741939 | Msa1182630:intron | 40.0% | |
| TGAAATGTATTTGAGCCGCA+GGG | + | chr8_1:17741962-17741981 | None:intergenic | 40.0% | |
| TTGAAATGTATTTGAGCCGC+AGG | + | chr8_1:17741963-17741982 | None:intergenic | 40.0% | |
| GTTCCTCTTTCCTACTATAC+TGG | - | chr8_1:17741999-17742018 | Msa1182630:intron | 40.0% | |
| ACTCCAGTATAGTAGGAAAG+AGG | + | chr8_1:17742005-17742024 | None:intergenic | 40.0% | |
| TCCTACTATACTGGAGTTCT+AGG | - | chr8_1:17742008-17742027 | Msa1182630:intron | 40.0% | |
| ACCTAGAACTCCAGTATAGT+AGG | + | chr8_1:17742012-17742031 | None:intergenic | 40.0% | |
| TTGAGGCTTGCATATCATAC+TGG | + | chr8_1:17742067-17742086 | None:intergenic | 40.0% | |
| TGTTTGTTTGTCTGGCTGTT+TGG | - | chr8_1:17742187-17742206 | Msa1182630:intron | 40.0% | |
| CTTCTGAATATGAGAGTCCA+TGG | - | chr8_1:17742444-17742463 | Msa1182630:intron | 40.0% | |
| ACCTGAACCTGTAACGAATT+TGG | - | chr8_1:17742512-17742531 | Msa1182630:intron | 40.0% | |
| AGATGTGCCAAATTCGTTAC+AGG | + | chr8_1:17742522-17742541 | None:intergenic | 40.0% | |
| ! | TATAAGCGGATTCGAATGGA+AGG | - | chr8_1:17742546-17742565 | Msa1182630:CDS | 40.0% |
| ! | ATAAGCGGATTCGAATGGAA+GGG | - | chr8_1:17742547-17742566 | Msa1182630:CDS | 40.0% |
| ! | TTTTCCCGTCTCTGATATGA+GGG | + | chr8_1:17742626-17742645 | None:intergenic | 40.0% |
| ! | ATTTTCCCGTCTCTGATATG+AGG | + | chr8_1:17742627-17742646 | None:intergenic | 40.0% |
| ATAACTGAGGGTCTTGAGAA+TGG | - | chr8_1:17742663-17742682 | Msa1182630:CDS | 40.0% | |
| ! | TCGCAATGTTGGTAAACAAG+TGG | - | chr8_1:17742716-17742735 | Msa1182630:CDS | 40.0% |
| TGGTACTGTCAACAATGTTG+AGG | + | chr8_1:17741093-17741112 | None:intergenic | 40.0% | |
| AGGTTCCAACGATGTTGTAT+TGG | - | chr8_1:17741132-17741151 | Msa1182630:CDS | 40.0% | |
| TGTCTTGTGATCCTTACATG+AGG | - | chr8_1:17741170-17741189 | Msa1182630:CDS | 40.0% | |
| CTCATAAGAGTCCTCATGTA+AGG | + | chr8_1:17741184-17741203 | None:intergenic | 40.0% | |
| !! | CGTGGATTGATAGATGCTTT+TGG | + | chr8_1:17741211-17741230 | None:intergenic | 40.0% |
| TGTCCTAGTAATCCGCAATT+TGG | - | chr8_1:17741463-17741482 | Msa1182630:intron | 40.0% | |
| ! | TGAGAATTTGAAGGAAGTGC+TGG | - | chr8_1:17741714-17741733 | Msa1182630:intron | 40.0% |
| TCGTAATTTCAGCCGTTAAC+TGG | - | chr8_1:17741840-17741859 | Msa1182630:CDS | 40.0% | |
| TTTCAGCCGTTAACTGGTTA+TGG | - | chr8_1:17741846-17741865 | Msa1182630:CDS | 40.0% | |
| GACACACCATAACCAGTTAA+CGG | + | chr8_1:17741855-17741874 | None:intergenic | 40.0% | |
| AAGGAAGGTGATATAGTGTG+GGG | - | chr8_1:17741906-17741925 | Msa1182630:CDS | 40.0% | |
| TAGTGTGGGGGATAACTAAT+AGG | - | chr8_1:17741919-17741938 | Msa1182630:intron | 40.0% | |
| AGTGTGGGGGATAACTAATA+GGG | - | chr8_1:17741920-17741939 | Msa1182630:intron | 40.0% | |
| TGAAATGTATTTGAGCCGCA+GGG | + | chr8_1:17741962-17741981 | None:intergenic | 40.0% | |
| TTGAAATGTATTTGAGCCGC+AGG | + | chr8_1:17741963-17741982 | None:intergenic | 40.0% | |
| GTTCCTCTTTCCTACTATAC+TGG | - | chr8_1:17741999-17742018 | Msa1182630:intron | 40.0% | |
| ACTCCAGTATAGTAGGAAAG+AGG | + | chr8_1:17742005-17742024 | None:intergenic | 40.0% | |
| TCCTACTATACTGGAGTTCT+AGG | - | chr8_1:17742008-17742027 | Msa1182630:intron | 40.0% | |
| ACCTAGAACTCCAGTATAGT+AGG | + | chr8_1:17742012-17742031 | None:intergenic | 40.0% | |
| TTGAGGCTTGCATATCATAC+TGG | + | chr8_1:17742067-17742086 | None:intergenic | 40.0% | |
| TGTTTGTTTGTCTGGCTGTT+TGG | - | chr8_1:17742187-17742206 | Msa1182630:intron | 40.0% | |
| CTTCTGAATATGAGAGTCCA+TGG | - | chr8_1:17742444-17742463 | Msa1182630:intron | 40.0% | |
| ACCTGAACCTGTAACGAATT+TGG | - | chr8_1:17742512-17742531 | Msa1182630:intron | 40.0% | |
| AGATGTGCCAAATTCGTTAC+AGG | + | chr8_1:17742522-17742541 | None:intergenic | 40.0% | |
| ! | TATAAGCGGATTCGAATGGA+AGG | - | chr8_1:17742546-17742565 | Msa1182630:CDS | 40.0% |
| ! | ATAAGCGGATTCGAATGGAA+GGG | - | chr8_1:17742547-17742566 | Msa1182630:CDS | 40.0% |
| ! | TTTTCCCGTCTCTGATATGA+GGG | + | chr8_1:17742626-17742645 | None:intergenic | 40.0% |
| ! | ATTTTCCCGTCTCTGATATG+AGG | + | chr8_1:17742627-17742646 | None:intergenic | 40.0% |
| ATAACTGAGGGTCTTGAGAA+TGG | - | chr8_1:17742663-17742682 | Msa1182630:CDS | 40.0% | |
| ! | TCGCAATGTTGGTAAACAAG+TGG | - | chr8_1:17742716-17742735 | Msa1182630:CDS | 40.0% |
| ACAACATCGTTGGAACCTTC+TGG | + | chr8_1:17741130-17741149 | None:intergenic | 45.0% | |
| CCTAGTAATCCGCAATTTGG+CGG | - | chr8_1:17741466-17741485 | Msa1182630:intron | 45.0% | |
| CTTATGCTACCGCCAAATTG+CGG | + | chr8_1:17741478-17741497 | None:intergenic | 45.0% | |
| !! | TTGAAGGAAGTGCTGGATAG+AGG | - | chr8_1:17741721-17741740 | Msa1182630:intron | 45.0% |
| !! | TGAAGGAAGTGCTGGATAGA+GGG | - | chr8_1:17741722-17741741 | Msa1182630:intron | 45.0% |
| AGGAAGGTGATATAGTGTGG+GGG | - | chr8_1:17741907-17741926 | Msa1182630:CDS | 45.0% | |
| TCATTCCACAAGCAGGTATG+CGG | + | chr8_1:17742470-17742489 | None:intergenic | 45.0% | |
| TGTGAGATCATTCCACAAGC+AGG | + | chr8_1:17742477-17742496 | None:intergenic | 45.0% | |
| GCCAAATTCGTTACAGGTTC+AGG | + | chr8_1:17742516-17742535 | None:intergenic | 45.0% | |
| !! | AATGGTCCTGCAGCATTGAT+TGG | - | chr8_1:17742681-17742700 | Msa1182630:CDS | 45.0% |
| !! | GCATTGATTGGCCTGTATAG+TGG | - | chr8_1:17742693-17742712 | Msa1182630:CDS | 45.0% |
| CAACATTGCGACCACTATAC+AGG | + | chr8_1:17742707-17742726 | None:intergenic | 45.0% | |
| CTGTATAGTGGTCGCAATGT+TGG | - | chr8_1:17742705-17742724 | Msa1182630:CDS | 45.0% | |
| ACAACATCGTTGGAACCTTC+TGG | + | chr8_1:17741130-17741149 | None:intergenic | 45.0% | |
| CCTAGTAATCCGCAATTTGG+CGG | - | chr8_1:17741466-17741485 | Msa1182630:intron | 45.0% | |
| CTTATGCTACCGCCAAATTG+CGG | + | chr8_1:17741478-17741497 | None:intergenic | 45.0% | |
| !! | TTGAAGGAAGTGCTGGATAG+AGG | - | chr8_1:17741721-17741740 | Msa1182630:intron | 45.0% |
| !! | TGAAGGAAGTGCTGGATAGA+GGG | - | chr8_1:17741722-17741741 | Msa1182630:intron | 45.0% |
| AGGAAGGTGATATAGTGTGG+GGG | - | chr8_1:17741907-17741926 | Msa1182630:CDS | 45.0% | |
| TCATTCCACAAGCAGGTATG+CGG | + | chr8_1:17742470-17742489 | None:intergenic | 45.0% | |
| TGTGAGATCATTCCACAAGC+AGG | + | chr8_1:17742477-17742496 | None:intergenic | 45.0% | |
| GCCAAATTCGTTACAGGTTC+AGG | + | chr8_1:17742516-17742535 | None:intergenic | 45.0% | |
| !! | AATGGTCCTGCAGCATTGAT+TGG | - | chr8_1:17742681-17742700 | Msa1182630:CDS | 45.0% |
| !! | GCATTGATTGGCCTGTATAG+TGG | - | chr8_1:17742693-17742712 | Msa1182630:CDS | 45.0% |
| CAACATTGCGACCACTATAC+AGG | + | chr8_1:17742707-17742726 | None:intergenic | 45.0% | |
| CTGTATAGTGGTCGCAATGT+TGG | - | chr8_1:17742705-17742724 | Msa1182630:CDS | 45.0% | |
| !!! | TGTTATTTATATATTTTAAT+TGG | - | chr8_1:17741641-17741660 | Msa1182630:intron | 5.0% |
| !!! | TGTTATTTATATATTTTAAT+TGG | - | chr8_1:17741641-17741660 | Msa1182630:intron | 5.0% |
| GATTGAGGAACATAGGCACG+TGG | + | chr8_1:17741229-17741248 | None:intergenic | 50.0% | |
| ! | CCGCCAAATTGCGGATTACT+AGG | + | chr8_1:17741469-17741488 | None:intergenic | 50.0% |
| !! | AAGTGCTGGATAGAGGGAAG+TGG | - | chr8_1:17741728-17741747 | Msa1182630:intron | 50.0% |
| AGAGTACAGCTTGATCCCTG+CGG | - | chr8_1:17741944-17741963 | Msa1182630:intron | 50.0% | |
| !! | TTACAGACGGGTTAGCCATC+AGG | - | chr8_1:17742139-17742158 | Msa1182630:intron | 50.0% |
| GTCCTCCCTCATATCAGAGA+CGG | - | chr8_1:17742618-17742637 | Msa1182630:CDS | 50.0% | |
| TCCTCCCTCATATCAGAGAC+GGG | - | chr8_1:17742619-17742638 | Msa1182630:CDS | 50.0% | |
| TACAGGCCAATCAATGCTGC+AGG | + | chr8_1:17742690-17742709 | None:intergenic | 50.0% | |
| GATTGAGGAACATAGGCACG+TGG | + | chr8_1:17741229-17741248 | None:intergenic | 50.0% | |
| ! | CCGCCAAATTGCGGATTACT+AGG | + | chr8_1:17741469-17741488 | None:intergenic | 50.0% |
| !! | AAGTGCTGGATAGAGGGAAG+TGG | - | chr8_1:17741728-17741747 | Msa1182630:intron | 50.0% |
| AGAGTACAGCTTGATCCCTG+CGG | - | chr8_1:17741944-17741963 | Msa1182630:intron | 50.0% | |
| !! | TTACAGACGGGTTAGCCATC+AGG | - | chr8_1:17742139-17742158 | Msa1182630:intron | 50.0% |
| GTCCTCCCTCATATCAGAGA+CGG | - | chr8_1:17742618-17742637 | Msa1182630:CDS | 50.0% | |
| TCCTCCCTCATATCAGAGAC+GGG | - | chr8_1:17742619-17742638 | Msa1182630:CDS | 50.0% | |
| TACAGGCCAATCAATGCTGC+AGG | + | chr8_1:17742690-17742709 | None:intergenic | 50.0% | |
| TCCCGTCTCTGATATGAGGG+AGG | + | chr8_1:17742623-17742642 | None:intergenic | 55.0% | |
| TCCCGTCTCTGATATGAGGG+AGG | + | chr8_1:17742623-17742642 | None:intergenic | 55.0% | |
| CACAAGCAGGTATGCGGCCA+TGG | + | chr8_1:17742464-17742483 | None:intergenic | 60.0% | |
| CATGGCCGCATACCTGCTTG+TGG | - | chr8_1:17742462-17742481 | Msa1182630:intron | 60.0% | |
| CACAAGCAGGTATGCGGCCA+TGG | + | chr8_1:17742464-17742483 | None:intergenic | 60.0% | |
| CATGGCCGCATACCTGCTTG+TGG | - | chr8_1:17742462-17742481 | Msa1182630:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 17741022 | 17742758 | 17741022 | ID=Msa1182630;Name=Msa1182630 |
| chr8_1 | mRNA | 17741022 | 17742758 | 17741022 | ID=Msa1182630-mRNA-1;Parent=Msa1182630;Name=Msa1182630-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|3|0|246 |
| chr8_1 | exon | 17742531 | 17742758 | 17742531 | ID=Msa1182630-mRNA-1:exon:6693;Parent=Msa1182630-mRNA-1 |
| chr8_1 | exon | 17741751 | 17741928 | 17741751 | ID=Msa1182630-mRNA-1:exon:6692;Parent=Msa1182630-mRNA-1 |
| chr8_1 | exon | 17741022 | 17741356 | 17741022 | ID=Msa1182630-mRNA-1:exon:6691;Parent=Msa1182630-mRNA-1 |
| chr8_1 | CDS | 17742531 | 17742758 | 17742531 | ID=Msa1182630-mRNA-1:cds;Parent=Msa1182630-mRNA-1 |
| chr8_1 | CDS | 17741751 | 17741928 | 17741751 | ID=Msa1182630-mRNA-1:cds;Parent=Msa1182630-mRNA-1 |
| chr8_1 | CDS | 17741022 | 17741356 | 17741022 | ID=Msa1182630-mRNA-1:cds;Parent=Msa1182630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
