Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0154770 | XP_003592342.3 | 95.804 | 286 | 10 | 2 | 1 | 286 | 1 | 284 | 0.0 | 549 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0154770 | I3SR39 | 95.804 | 286 | 10 | 2 | 1 | 286 | 1 | 284 | 0.0 | 549 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0154770 | -0.845234 | 4.611598e-59 | -8.615850e-47 |
| Msa0003470 | Msa0154770 | 0.807477 | 4.958198e-50 | -8.615850e-47 |
| Msa0006290 | Msa0154770 | 0.822217 | 2.666100e-53 | -8.615850e-47 |
| Msa0008850 | Msa0154770 | 0.822778 | 1.974930e-53 | -8.615850e-47 |
| Msa0013050 | Msa0154770 | -0.817256 | 3.623531e-52 | -8.615850e-47 |
| Msa0027540 | Msa0154770 | 0.816201 | 6.248901e-52 | -8.615850e-47 |
| Msa0027580 | Msa0154770 | 0.831959 | 1.242131e-55 | -8.615850e-47 |
| Msa0030380 | Msa0154770 | 0.846457 | 2.146384e-59 | -8.615850e-47 |
| Msa0032610 | Msa0154770 | 0.809442 | 1.888115e-50 | -8.615850e-47 |
| Msa0041970 | Msa0154770 | 0.819435 | 1.163215e-52 | -8.615850e-47 |
| Msa0044710 | Msa0154770 | 0.840301 | 9.443279e-58 | -8.615850e-47 |
| Msa0049400 | Msa0154770 | -0.839542 | 1.489093e-57 | -8.615850e-47 |
| Msa0053900 | Msa0154770 | 0.825375 | 4.851057e-54 | -8.615850e-47 |
| Msa0054930 | Msa0154770 | 0.811736 | 6.030956e-51 | -8.615850e-47 |
| Msa0057140 | Msa0154770 | 0.812983 | 3.220769e-51 | -8.615850e-47 |
| Msa0067150 | Msa0154770 | 0.867440 | 1.366297e-65 | -8.615850e-47 |
| Msa0068410 | Msa0154770 | 0.808477 | 3.038510e-50 | -8.615850e-47 |
| Msa0071240 | Msa0154770 | 0.863282 | 2.781566e-64 | -8.615850e-47 |
| Msa0075310 | Msa0154770 | 0.818414 | 1.985261e-52 | -8.615850e-47 |
| Msa0075340 | Msa0154770 | 0.833233 | 5.998305e-56 | -8.615850e-47 |
| Msa0087290 | Msa0154770 | 0.811083 | 8.359896e-51 | -8.615850e-47 |
| Msa0094920 | Msa0154770 | 0.819756 | 9.825615e-53 | -8.615850e-47 |
| Msa0095380 | Msa0154770 | 0.821128 | 4.760908e-53 | -8.615850e-47 |
| Msa0097990 | Msa0154770 | 0.806353 | 8.572776e-50 | -8.615850e-47 |
| Msa0099510 | Msa0154770 | 0.809896 | 1.508355e-50 | -8.615850e-47 |
| Msa0100300 | Msa0154770 | 0.819463 | 1.146172e-52 | -8.615850e-47 |
| Msa0101060 | Msa0154770 | 0.804919 | 1.714283e-49 | -8.615850e-47 |
| Msa0112420 | Msa0154770 | 0.808621 | 2.831080e-50 | -8.615850e-47 |
| Msa0119850 | Msa0154770 | 0.816817 | 4.547803e-52 | -8.615850e-47 |
| Msa0133910 | Msa0154770 | 0.932096 | 1.419884e-94 | -8.615850e-47 |
| Msa0136390 | Msa0154770 | 0.849432 | 3.246410e-60 | -8.615850e-47 |
| Msa0137040 | Msa0154770 | 0.821158 | 4.684037e-53 | -8.615850e-47 |
| Msa0143080 | Msa0154770 | 0.808899 | 2.469196e-50 | -8.615850e-47 |
| Msa0145950 | Msa0154770 | 0.813403 | 2.604766e-51 | -8.615850e-47 |
| Msa0148120 | Msa0154770 | 0.821535 | 3.833659e-53 | -8.615850e-47 |
| Msa0148360 | Msa0154770 | 0.825790 | 3.867897e-54 | -8.615850e-47 |
| Msa0154770 | Msa0154780 | 0.894018 | 3.656030e-75 | -8.615850e-47 |
| Msa0154770 | Msa0156650 | -0.813234 | 2.837770e-51 | -8.615850e-47 |
| Msa0154770 | Msa0162770 | -0.826970 | 2.024531e-54 | -8.615850e-47 |
| Msa0154770 | Msa0168100 | 0.818628 | 1.774727e-52 | -8.615850e-47 |
| Msa0154770 | Msa0168640 | -0.815069 | 1.116544e-51 | -8.615850e-47 |
| Msa0154770 | Msa0172350 | 0.810017 | 1.420392e-50 | -8.615850e-47 |
| Msa0154770 | Msa0173740 | 0.847206 | 1.339224e-59 | -8.615850e-47 |
| Msa0154770 | Msa0173820 | 0.847526 | 1.093521e-59 | -8.615850e-47 |
| Msa0154770 | Msa0173830 | 0.816620 | 5.034777e-52 | -8.615850e-47 |
| Msa0154770 | Msa0178990 | 0.857481 | 1.584969e-62 | -8.615850e-47 |
| Msa0154770 | Msa0182280 | 0.812165 | 4.862402e-51 | -8.615850e-47 |
| Msa0154770 | Msa0182930 | 0.833859 | 4.186327e-56 | -8.615850e-47 |
| Msa0154770 | Msa0194970 | 0.818591 | 1.810101e-52 | -8.615850e-47 |
| Msa0154770 | Msa0200950 | -0.812961 | 3.257833e-51 | -8.615850e-47 |
| Msa0154770 | Msa0223100 | 0.834235 | 3.370176e-56 | -8.615850e-47 |
| Msa0154770 | Msa0223290 | 0.837762 | 4.292074e-57 | -8.615850e-47 |
| Msa0154770 | Msa0223380 | 0.827073 | 1.913257e-54 | -8.615850e-47 |
| Msa0154770 | Msa0224730 | 0.814828 | 1.262715e-51 | -8.615850e-47 |
| Msa0154770 | Msa0233610 | 0.805296 | 1.429415e-49 | -8.615850e-47 |
| Msa0154770 | Msa0236980 | 0.803847 | 2.867509e-49 | -8.615850e-47 |
| Msa0154770 | Msa0240780 | 0.808351 | 3.232077e-50 | -8.615850e-47 |
| Msa0154770 | Msa0242680 | 0.808246 | 3.403444e-50 | -8.615850e-47 |
| Msa0154770 | Msa0244270 | 0.834714 | 2.555423e-56 | -8.615850e-47 |
| Msa0154770 | Msa0252180 | 0.814153 | 1.781425e-51 | -8.615850e-47 |
| Msa0154770 | Msa0258670 | -0.806688 | 7.285177e-50 | -8.615850e-47 |
| Msa0154770 | Msa0260210 | 0.814619 | 1.405047e-51 | -8.615850e-47 |
| Msa0154770 | Msa0265580 | 0.801152 | 1.030381e-48 | -8.615850e-47 |
| Msa0154770 | Msa0266210 | 0.824185 | 9.255553e-54 | -8.615850e-47 |
| Msa0154770 | Msa0267760 | 0.809301 | 2.024336e-50 | -8.615850e-47 |
| Msa0154770 | Msa0275030 | 0.803327 | 3.675500e-49 | -8.615850e-47 |
| Msa0154770 | Msa0275400 | -0.804765 | 1.845833e-49 | -8.615850e-47 |
| Msa0154770 | Msa0282170 | 0.834042 | 3.767279e-56 | -8.615850e-47 |
| Msa0154770 | Msa0284780 | 0.803069 | 4.157109e-49 | -8.615850e-47 |
| Msa0154770 | Msa0284960 | 0.806707 | 7.218234e-50 | -8.615850e-47 |
| Msa0154770 | Msa0287670 | 0.813127 | 2.994860e-51 | -8.615850e-47 |
| Msa0154770 | Msa0288240 | 0.875674 | 2.557526e-68 | -8.615850e-47 |
| Msa0154770 | Msa0288330 | 0.823076 | 1.682590e-53 | -8.615850e-47 |
| Msa0154770 | Msa0301180 | 0.801588 | 8.387835e-49 | -8.615850e-47 |
| Msa0154770 | Msa0302650 | 0.834576 | 2.767007e-56 | -8.615850e-47 |
| Msa0154770 | Msa0304290 | 0.819910 | 9.062311e-53 | -8.615850e-47 |
| Msa0154770 | Msa0304330 | 0.828446 | 8.950651e-55 | -8.615850e-47 |
| Msa0154770 | Msa0305890 | 0.802918 | 4.465421e-49 | -8.615850e-47 |
| Msa0154770 | Msa0326670 | 0.858903 | 5.983428e-63 | -8.615850e-47 |
| Msa0154770 | Msa0327410 | 0.815776 | 7.774850e-52 | -8.615850e-47 |
| Msa0154770 | Msa0340810 | 0.807612 | 4.641759e-50 | -8.615850e-47 |
| Msa0154770 | Msa0372670 | 0.800063 | 1.717972e-48 | -8.615850e-47 |
| Msa0154770 | Msa0377530 | 0.829268 | 5.659768e-55 | -8.615850e-47 |
| Msa0154770 | Msa0379410 | 0.802758 | 4.819756e-49 | -8.615850e-47 |
| Msa0154770 | Msa0380040 | 0.813902 | 2.023653e-51 | -8.615850e-47 |
| Msa0154770 | Msa0393710 | 0.809491 | 1.843034e-50 | -8.615850e-47 |
| Msa0154770 | Msa0409270 | 0.800204 | 1.608165e-48 | -8.615850e-47 |
| Msa0154770 | Msa0419620 | -0.809816 | 1.569081e-50 | -8.615850e-47 |
| Msa0154770 | Msa0419640 | -0.836269 | 1.033050e-56 | -8.615850e-47 |
| Msa0154770 | Msa0421170 | 0.827049 | 1.939044e-54 | -8.615850e-47 |
| Msa0154770 | Msa0421780 | -0.807689 | 4.471980e-50 | -8.615850e-47 |
| Msa0154770 | Msa0426810 | 0.851060 | 1.135022e-60 | -8.615850e-47 |
| Msa0154770 | Msa0429290 | 0.808175 | 3.524367e-50 | -8.615850e-47 |
| Msa0154770 | Msa0431520 | 0.802539 | 5.348294e-49 | -8.615850e-47 |
| Msa0154770 | Msa0431830 | 0.814344 | 1.615885e-51 | -8.615850e-47 |
| Msa0154770 | Msa0446580 | 0.814566 | 1.443500e-51 | -8.615850e-47 |
| Msa0154770 | Msa0448080 | 0.811129 | 8.168795e-51 | -8.615850e-47 |
| Msa0154770 | Msa0462590 | 0.813055 | 3.107116e-51 | -8.615850e-47 |
| Msa0154770 | Msa0467900 | -0.806680 | 7.314236e-50 | -8.615850e-47 |
| Msa0154770 | Msa0467960 | -0.825768 | 3.915698e-54 | -8.615850e-47 |
| Msa0154770 | Msa0469910 | -0.825556 | 4.395203e-54 | -8.615850e-47 |
| Msa0154770 | Msa0475240 | 0.801246 | 9.858263e-49 | -8.615850e-47 |
| Msa0154770 | Msa0475580 | 0.807272 | 5.482115e-50 | -8.615850e-47 |
| Msa0154770 | Msa0482680 | 0.836166 | 1.097143e-56 | -8.615850e-47 |
| Msa0154770 | Msa0490350 | 0.809504 | 1.831296e-50 | -8.615850e-47 |
| Msa0154770 | Msa0493920 | 0.853619 | 2.119439e-61 | -8.615850e-47 |
| Msa0154770 | Msa0508200 | 0.805929 | 1.052763e-49 | -8.615850e-47 |
| Msa0154770 | Msa0508610 | 0.834076 | 3.693796e-56 | -8.615850e-47 |
| Msa0154770 | Msa0508650 | 0.828020 | 1.133469e-54 | -8.615850e-47 |
| Msa0154770 | Msa0511720 | -0.818566 | 1.833466e-52 | -8.615850e-47 |
| Msa0154770 | Msa0517490 | 0.807604 | 4.660512e-50 | -8.615850e-47 |
| Msa0154770 | Msa0519220 | 0.817210 | 3.710841e-52 | -8.615850e-47 |
| Msa0154770 | Msa0535030 | 0.834577 | 2.765114e-56 | -8.615850e-47 |
| Msa0154770 | Msa0535060 | 0.834663 | 2.631342e-56 | -8.615850e-47 |
| Msa0154770 | Msa0535450 | 0.834773 | 2.468247e-56 | -8.615850e-47 |
| Msa0154770 | Msa0547400 | 0.810685 | 1.019334e-50 | -8.615850e-47 |
| Msa0154770 | Msa0553220 | -0.839728 | 1.331811e-57 | -8.615850e-47 |
| Msa0154770 | Msa0556040 | 0.817781 | 2.759865e-52 | -8.615850e-47 |
| Msa0154770 | Msa0558880 | 0.801603 | 8.329462e-49 | -8.615850e-47 |
| Msa0154770 | Msa0562300 | -0.814930 | 1.198827e-51 | -8.615850e-47 |
| Msa0154770 | Msa0564930 | 0.844222 | 8.640589e-59 | -8.615850e-47 |
| Msa0154770 | Msa0568820 | 0.821535 | 3.835467e-53 | -8.615850e-47 |
| Msa0154770 | Msa0571700 | 0.840477 | 8.491821e-58 | -8.615850e-47 |
| Msa0154770 | Msa0576600 | 0.835691 | 1.448042e-56 | -8.615850e-47 |
| Msa0154770 | Msa0579340 | 0.816508 | 5.334732e-52 | -8.615850e-47 |
| Msa0154770 | Msa0580420 | 0.802807 | 4.708812e-49 | -8.615850e-47 |
| Msa0154770 | Msa0590680 | 0.836728 | 7.893488e-57 | -8.615850e-47 |
| Msa0154770 | Msa0591060 | 0.817792 | 2.743506e-52 | -8.615850e-47 |
| Msa0154770 | Msa0591770 | 0.825905 | 3.632237e-54 | -8.615850e-47 |
| Msa0154770 | Msa0607340 | -0.818725 | 1.687587e-52 | -8.615850e-47 |
| Msa0154770 | Msa0607510 | 0.818260 | 2.150875e-52 | -8.615850e-47 |
| Msa0154770 | Msa0609970 | 0.814839 | 1.256041e-51 | -8.615850e-47 |
| Msa0154770 | Msa0614990 | 0.816958 | 4.226973e-52 | -8.615850e-47 |
| Msa0154770 | Msa0617830 | 0.839079 | 1.963289e-57 | -8.615850e-47 |
| Msa0154770 | Msa0618010 | 0.849957 | 2.316516e-60 | -8.615850e-47 |
| Msa0154770 | Msa0619070 | 0.836765 | 7.724395e-57 | -8.615850e-47 |
| Msa0154770 | Msa0622340 | 0.806920 | 6.506293e-50 | -8.615850e-47 |
| Msa0154770 | Msa0638280 | 0.822399 | 2.418311e-53 | -8.615850e-47 |
| Msa0154770 | Msa0638320 | 0.837572 | 4.802234e-57 | -8.615850e-47 |
| Msa0154770 | Msa0642650 | 0.814029 | 1.896735e-51 | -8.615850e-47 |
| Msa0154770 | Msa0647450 | -0.826503 | 2.618369e-54 | -8.615850e-47 |
| Msa0154770 | Msa0650620 | 0.816912 | 4.329141e-52 | -8.615850e-47 |
| Msa0154770 | Msa0650650 | 0.807103 | 5.951670e-50 | -8.615850e-47 |
| Msa0154770 | Msa0650740 | 0.809412 | 1.916695e-50 | -8.615850e-47 |
| Msa0154770 | Msa0655660 | -0.826382 | 2.797002e-54 | -8.615850e-47 |
| Msa0154770 | Msa0669850 | 0.860224 | 2.397491e-63 | -8.615850e-47 |
| Msa0154770 | Msa0677270 | 0.843359 | 1.470966e-58 | -8.615850e-47 |
| Msa0154770 | Msa0709500 | 0.802896 | 4.513822e-49 | -8.615850e-47 |
| Msa0154770 | Msa0711490 | 0.821845 | 3.251110e-53 | -8.615850e-47 |
| Msa0154770 | Msa0725920 | 0.801085 | 1.063283e-48 | -8.615850e-47 |
| Msa0154770 | Msa0726830 | 0.828877 | 7.040358e-55 | -8.615850e-47 |
| Msa0154770 | Msa0726860 | 0.826231 | 3.038984e-54 | -8.615850e-47 |
| Msa0154770 | Msa0743260 | 0.810877 | 9.266029e-51 | -8.615850e-47 |
| Msa0154770 | Msa0743650 | 0.802052 | 6.735472e-49 | -8.615850e-47 |
| Msa0154770 | Msa0754720 | -0.804561 | 2.036611e-49 | -8.615850e-47 |
| Msa0154770 | Msa0756310 | 0.807039 | 6.139820e-50 | -8.615850e-47 |
| Msa0154770 | Msa0783270 | 0.808549 | 2.932024e-50 | -8.615850e-47 |
| Msa0154770 | Msa0789270 | 0.837732 | 4.368719e-57 | -8.615850e-47 |
| Msa0154770 | Msa0789280 | 0.835531 | 1.589856e-56 | -8.615850e-47 |
| Msa0154770 | Msa0789290 | 0.829923 | 3.921807e-55 | -8.615850e-47 |
| Msa0154770 | Msa0789300 | 0.826311 | 2.909168e-54 | -8.615850e-47 |
| Msa0154770 | Msa0790390 | -0.803680 | 3.106036e-49 | -8.615850e-47 |
| Msa0154770 | Msa0790850 | 0.808727 | 2.686775e-50 | -8.615850e-47 |
| Msa0154770 | Msa0791820 | 0.814926 | 1.201114e-51 | -8.615850e-47 |
| Msa0154770 | Msa0792090 | 0.818301 | 2.105467e-52 | -8.615850e-47 |
| Msa0154770 | Msa0792790 | -0.839054 | 1.992489e-57 | -8.615850e-47 |
| Msa0154770 | Msa0828570 | 0.803619 | 3.198018e-49 | -8.615850e-47 |
| Msa0154770 | Msa0842210 | 0.802743 | 4.853806e-49 | -8.615850e-47 |
| Msa0154770 | Msa0846030 | 0.804205 | 2.415305e-49 | -8.615850e-47 |
| Msa0154770 | Msa0863770 | 0.806408 | 8.346985e-50 | -8.615850e-47 |
| Msa0154770 | Msa0870150 | 0.805588 | 1.241736e-49 | -8.615850e-47 |
| Msa0154770 | Msa0874500 | 0.808149 | 3.569175e-50 | -8.615850e-47 |
| Msa0154770 | Msa0898860 | 0.828982 | 6.641641e-55 | -8.615850e-47 |
| Msa0154770 | Msa0907700 | 0.807761 | 4.316133e-50 | -8.615850e-47 |
| Msa0154770 | Msa0922540 | 0.820667 | 6.075628e-53 | -8.615850e-47 |
| Msa0154770 | Msa0930140 | 0.809218 | 2.109791e-50 | -8.615850e-47 |
| Msa0154770 | Msa0942730 | 0.810714 | 1.004574e-50 | -8.615850e-47 |
| Msa0154770 | Msa0956520 | -0.807833 | 4.167287e-50 | -8.615850e-47 |
| Msa0154770 | Msa0958020 | 0.809372 | 1.954752e-50 | -8.615850e-47 |
| Msa0154770 | Msa0965860 | 0.812658 | 3.795327e-51 | -8.615850e-47 |
| Msa0154770 | Msa1002040 | 0.817965 | 2.507759e-52 | -8.615850e-47 |
| Msa0154770 | Msa1015060 | 0.800020 | 1.753268e-48 | -8.615850e-47 |
| Msa0154770 | Msa1037000 | 0.823399 | 1.414298e-53 | -8.615850e-47 |
| Msa0154770 | Msa1037700 | -0.801233 | 9.916944e-49 | -8.615850e-47 |
| Msa0154770 | Msa1038320 | 0.801129 | 1.041439e-48 | -8.615850e-47 |
| Msa0154770 | Msa1040890 | 0.815881 | 7.363738e-52 | -8.615850e-47 |
| Msa0154770 | Msa1047400 | 0.810198 | 1.298402e-50 | -8.615850e-47 |
| Msa0154770 | Msa1069660 | -0.811106 | 8.266022e-51 | -8.615850e-47 |
| Msa0154770 | Msa1072460 | -0.840174 | 1.019138e-57 | -8.615850e-47 |
| Msa0154770 | Msa1084470 | 0.804120 | 2.515861e-49 | -8.615850e-47 |
| Msa0154770 | Msa1089840 | 0.819938 | 8.928081e-53 | -8.615850e-47 |
| Msa0154770 | Msa1094430 | 0.814573 | 1.437937e-51 | -8.615850e-47 |
| Msa0154770 | Msa1130210 | -0.838931 | 2.144648e-57 | -8.615850e-47 |
| Msa0154770 | Msa1143930 | -0.805154 | 1.530943e-49 | -8.615850e-47 |
| Msa0154770 | Msa1171360 | 0.803588 | 3.245484e-49 | -8.615850e-47 |
| Msa0154770 | Msa1171870 | 0.839217 | 1.808333e-57 | -8.615850e-47 |
| Msa0154770 | Msa1187520 | 0.852022 | 6.063596e-61 | -8.615850e-47 |
| Msa0154770 | Msa1206020 | 0.801071 | 1.070520e-48 | -8.615850e-47 |
| Msa0154770 | Msa1217660 | 0.831585 | 1.535454e-55 | -8.615850e-47 |
| Msa0154770 | Msa1217810 | 0.816574 | 5.155740e-52 | -8.615850e-47 |
| Msa0154770 | Msa1217830 | 0.818566 | 1.833466e-52 | -8.615850e-47 |
| Msa0154770 | Msa1217860 | 0.802955 | 4.387173e-49 | -8.615850e-47 |
| Msa0154770 | Msa1218650 | 0.818057 | 2.391268e-52 | -8.615850e-47 |
| Msa0154770 | Msa1241820 | 0.821614 | 3.676925e-53 | -8.615850e-47 |
| Msa0154770 | Msa1260130 | 0.840587 | 7.947671e-58 | -8.615850e-47 |
| Msa0154770 | Msa1265960 | 0.801045 | 1.083455e-48 | -8.615850e-47 |
| Msa0154770 | Msa1267260 | 0.859872 | 3.062822e-63 | -8.615850e-47 |
| Msa0154770 | Msa1269300 | 0.819228 | 1.296358e-52 | -8.615850e-47 |
| Msa0154770 | Msa1282920 | 0.878703 | 2.266445e-69 | -8.615850e-47 |
| Msa0154770 | Msa1300050 | 0.841835 | 3.733147e-58 | -8.615850e-47 |
| Msa0154770 | Msa1302190 | -0.827504 | 1.508592e-54 | -8.615850e-47 |
| Msa0154770 | Msa1303160 | 0.839339 | 1.681273e-57 | -8.615850e-47 |
| Msa0154770 | Msa1306430 | 0.842397 | 2.651890e-58 | -8.615850e-47 |
| Msa0154770 | Msa1322190 | 0.821588 | 3.727321e-53 | -8.615850e-47 |
| Msa0154770 | Msa1328850 | 0.810711 | 1.006369e-50 | -8.615850e-47 |
| Msa0154770 | Msa1347010 | 0.803329 | 3.672161e-49 | -8.615850e-47 |
| Msa0154770 | Msa1350690 | 0.811677 | 6.210164e-51 | -8.615850e-47 |
| Msa0154770 | Msa1359390 | 0.823277 | 1.510596e-53 | -8.615850e-47 |
| Msa0154770 | Msa1368210 | 0.810857 | 9.357495e-51 | -8.615850e-47 |
| Msa0154770 | Msa1390310 | 0.814628 | 1.398746e-51 | -8.615850e-47 |
| Msa0154770 | Msa1396950 | 0.808726 | 2.688066e-50 | -8.615850e-47 |
| Msa0154770 | Msa1397050 | 0.831179 | 1.932709e-55 | -8.615850e-47 |
| Msa0154770 | Msa1397970 | 0.825241 | 5.218694e-54 | -8.615850e-47 |
| Msa0154770 | Msa1403580 | -0.800123 | 1.670527e-48 | -8.615850e-47 |
| Msa0154770 | Msa1403930 | -0.807735 | 4.372535e-50 | -8.615850e-47 |
| Msa0154770 | Msa1404730 | 0.812007 | 5.265431e-51 | -8.615850e-47 |
| Msa0154770 | Msa1419110 | 0.806333 | 8.657023e-50 | -8.615850e-47 |
| Msa0154770 | Msa1425010 | 0.818633 | 1.770039e-52 | -8.615850e-47 |
| Msa0154770 | Msa1427830 | 0.841630 | 4.229607e-58 | -8.615850e-47 |
| Msa0154770 | Msa1432400 | 0.800966 | 1.124398e-48 | -8.615850e-47 |
| Msa0154770 | Msa1439230 | 0.816118 | 6.519860e-52 | -8.615850e-47 |
| Msa0154770 | Msa1439960 | 0.816801 | 4.584315e-52 | -8.615850e-47 |
| Msa0154770 | Msa1440000 | 0.817613 | 3.011847e-52 | -8.615850e-47 |
| Msa0154770 | Msa1449880 | 0.807672 | 4.507883e-50 | -8.615850e-47 |
| Msa0154770 | Msa1450020 | 0.817806 | 2.724044e-52 | -8.615850e-47 |
| Msa0154770 | Msa1452470 | 0.846983 | 1.541566e-59 | -8.615850e-47 |
| Msa0154770 | Msa1453620 | 0.808126 | 3.609188e-50 | -8.615850e-47 |
| Msa0154770 | Msa1454110 | 0.850163 | 2.027729e-60 | -8.615850e-47 |
| Msa0154770 | Msa1461280 | 0.808127 | 3.607387e-50 | -8.615850e-47 |
| Msa0154770 | Msa1463970 | 0.811376 | 7.222421e-51 | -8.615850e-47 |
| Msa0154770 | Msa1465960 | 0.839973 | 1.149665e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0154770 | MtrunA17_Chr1g0204021 | 95.804 | 286 | 10 | 2 | 1 | 286 | 1 | 284 | 0.0 | 549 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0154770 | AT5G51880.1 | 67.660 | 235 | 72 | 2 | 52 | 286 | 20 | 250 | 1.46e-107 | 312 |
Find 66 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACACCTTTGGTAACATTTC+TGG | 0.127833 | 1_4:+19535701 | None:intergenic |
| AACCTATATAATCTAATATT+TGG | 0.132507 | 1_4:+19536854 | None:intergenic |
| CTGTTCTTGCTGATTCTATT+TGG | 0.169459 | 1_4:-19536943 | Msa0154770:CDS |
| GCTGATTCTATTTGGGATTC+TGG | 0.178268 | 1_4:-19536935 | Msa0154770:CDS |
| GGTTTGATGGAAGGCCATTT+TGG | 0.200195 | 1_4:+19537238 | None:intergenic |
| GTGTGTATCGTTCCTCTATT+TGG | 0.276967 | 1_4:+19537329 | None:intergenic |
| TGTTCTTGCTGATTCTATTT+GGG | 0.287853 | 1_4:-19536942 | Msa0154770:CDS |
| TTTACTCATCAAGGAAGTTT+AGG | 0.292415 | 1_4:-19537019 | Msa0154770:CDS |
| ATATCGTCAAGCGGTTCTTC+AGG | 0.324950 | 1_4:-19537363 | Msa0154770:CDS |
| AAACAACAACCGACCCAAAA+TGG | 0.337133 | 1_4:-19537252 | Msa0154770:CDS |
| ATTGAAACTGCTGAGGGAAT+TGG | 0.349090 | 1_4:-19537043 | Msa0154770:CDS |
| TAGAGATAATGATCGAATTT+CGG | 0.362145 | 1_4:-19536975 | Msa0154770:CDS |
| GGAGGAGAAACAGTCTTCTA+TGG | 0.362711 | 1_4:-19535922 | Msa0154770:CDS |
| AGATGAATCTGTAGGTTTGC+TGG | 0.376051 | 1_4:+19535960 | None:intergenic |
| TCATCTTCTGATCGTTTAGT+TGG | 0.379584 | 1_4:-19535943 | Msa0154770:CDS |
| TGCAGTAGTTTAAAATCTAC+AGG | 0.388657 | 1_4:+19535434 | None:intergenic |
| TACAAAGTTGGTCAACGGTT+TGG | 0.409112 | 1_4:-19536096 | Msa0154770:CDS |
| CTGGTATATTCTTCATCTGA+AGG | 0.431903 | 1_4:-19535613 | Msa0154770:three_prime_UTR |
| ATGGCACTCTTGCACATTCA+TGG | 0.434758 | 1_4:-19535747 | Msa0154770:CDS |
| CAAGAGTGCCATCCCTTCAA+TGG | 0.441258 | 1_4:+19535758 | None:intergenic |
| ATCGATGAGAGTAATGATCT+TGG | 0.448560 | 1_4:-19536066 | Msa0154770:CDS |
| CAAATAGAATCAGCAAGAAC+AGG | 0.457794 | 1_4:+19536944 | None:intergenic |
| ATCCAAATATTAGATTATAT+AGG | 0.468123 | 1_4:-19536856 | Msa0154770:intron |
| ACGAGATTTCGATCTCTTCA+CGG | 0.469965 | 1_4:-19537188 | Msa0154770:intron |
| TCTTCTGATCGTTTAGTTGG+AGG | 0.471044 | 1_4:-19535940 | Msa0154770:CDS |
| AAGAAATAGCATTGTGGCTG+AGG | 0.471528 | 1_4:-19535896 | Msa0154770:intron |
| ATGCCTTGTATCAAATTCTC+TGG | 0.474126 | 1_4:-19535632 | Msa0154770:three_prime_UTR |
| TTGATATCGAAGCTTACAAA+AGG | 0.479734 | 1_4:-19537408 | Msa0154770:CDS |
| TGTAAAATATGTCTTTCGTT+CGG | 0.480181 | 1_4:-19535682 | Msa0154770:CDS |
| TTACAGGTTGCTCCCATTGA+AGG | 0.491280 | 1_4:-19535771 | Msa0154770:intron |
| CTATAAGCTTCACCTTTCGC+TGG | 0.500286 | 1_4:+19536995 | None:intergenic |
| GTAGGGAGGAAGGGAGCGTA+AGG | 0.501839 | 1_4:-19537303 | Msa0154770:CDS |
| TCGGATGTTGTATTTGCTTG+AGG | 0.515517 | 1_4:-19535663 | Msa0154770:exon |
| GTTTATTTGAGTGGCGGACC+TGG | 0.517926 | 1_4:-19536012 | Msa0154770:CDS |
| GGAACGATACACACCTCGTA+GGG | 0.520041 | 1_4:-19537320 | Msa0154770:CDS |
| GCCTTGGATTTAACTTCACC+AGG | 0.523946 | 1_4:+19535994 | None:intergenic |
| TTGTATTTCAGGTACAAAGT+TGG | 0.529640 | 1_4:-19536108 | Msa0154770:intron |
| AAGAGTGCCATCCCTTCAAT+GGG | 0.530149 | 1_4:+19535759 | None:intergenic |
| TACACACCTCGTAGGGAGGA+AGG | 0.532568 | 1_4:-19537313 | Msa0154770:CDS |
| TATCGTCAAGCGGTTCTTCA+GGG | 0.532995 | 1_4:-19537362 | Msa0154770:CDS |
| GAGAGTAATGATCTTGGAGA+TGG | 0.540105 | 1_4:-19536060 | Msa0154770:CDS |
| TACAGGTTGCTCCCATTGAA+GGG | 0.545508 | 1_4:-19535770 | Msa0154770:intron |
| ACTTTGCTAGTTTATTTGAG+TGG | 0.558771 | 1_4:-19536021 | Msa0154770:CDS |
| GGGAGGAAGGGAGCGTAAGG+AGG | 0.570609 | 1_4:-19537300 | Msa0154770:CDS |
| CGATCAGAAGATGAATCTGT+AGG | 0.582135 | 1_4:+19535952 | None:intergenic |
| TCAGGTACAAAGTTGGTCAA+CGG | 0.585507 | 1_4:-19536101 | Msa0154770:intron |
| ACACACCTCGTAGGGAGGAA+GGG | 0.587796 | 1_4:-19537312 | Msa0154770:CDS |
| GGTTGCTCCCATTGAAGGGA+TGG | 0.588083 | 1_4:-19535766 | Msa0154770:CDS |
| ACCTGGTGAAGTTAAATCCA+AGG | 0.588470 | 1_4:-19535995 | Msa0154770:CDS |
| GGCATTCATTGAAACTGCTG+AGG | 0.593567 | 1_4:-19537050 | Msa0154770:CDS |
| TTGCTAGTTTATTTGAGTGG+CGG | 0.608800 | 1_4:-19536018 | Msa0154770:CDS |
| ATTCGAGGGAAAGCTGCTGT+AGG | 0.610629 | 1_4:-19536884 | Msa0154770:CDS |
| GGAGCGACGAAACCAAATAG+AGG | 0.610911 | 1_4:-19537341 | Msa0154770:CDS |
| ATATCGAAGCTTACAAAAGG+CGG | 0.612848 | 1_4:-19537405 | Msa0154770:CDS |
| AATTTGAAAAGTTCTAGTCA+AGG | 0.624516 | 1_4:+19535364 | None:intergenic |
| GCATTCATTGAAACTGCTGA+GGG | 0.636238 | 1_4:-19537049 | Msa0154770:CDS |
| TTTCTGATATAAGAATTCGA+GGG | 0.649354 | 1_4:-19536898 | Msa0154770:CDS |
| AGGAACGATACACACCTCGT+AGG | 0.654477 | 1_4:-19537321 | Msa0154770:CDS |
| GAAGCCAGAAATGTTACCAA+AGG | 0.654558 | 1_4:-19535705 | Msa0154770:CDS |
| GGAAGTTTAGGTCCAGCGAA+AGG | 0.660755 | 1_4:-19537007 | Msa0154770:CDS |
| ATACCAGAGAATTTGATACA+AGG | 0.662856 | 1_4:+19535629 | None:intergenic |
| ACGATACACACCTCGTAGGG+AGG | 0.666557 | 1_4:-19537317 | Msa0154770:CDS |
| GGCGGTCTGAAATCGAAGAG+AGG | 0.678046 | 1_4:-19537387 | Msa0154770:CDS |
| ACGCTCCCTTCCTCCCTACG+AGG | 0.685966 | 1_4:+19537307 | None:intergenic |
| AAGAGAGGTATATCGTCAAG+CGG | 0.696308 | 1_4:-19537372 | Msa0154770:CDS |
| TGGTTCAAGAAATAGCATTG+TGG | 0.705639 | 1_4:-19535902 | Msa0154770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTACTAAAAAAAATATCAA+TGG | - | chr1_4:19535395-19535414 | Msa0154770:three_prime_UTR | 10.0% |
| !! | ATTACTAAAAAAAATATCAA+TGG | - | chr1_4:19535395-19535414 | Msa0154770:three_prime_UTR | 10.0% |
| !!! | TCAAAAAGAAATAATTTTGA+AGG | + | chr1_4:19535423-19535442 | None:intergenic | 15.0% |
| !! | AATAATTCACAGATAAAATT+GGG | + | chr1_4:19535723-19535742 | None:intergenic | 15.0% |
| !! | ATCCAAATATTAGATTATAT+AGG | - | chr1_4:19535991-19536010 | Msa0154770:CDS | 15.0% |
| !! | AACCTATATAATCTAATATT+TGG | + | chr1_4:19535996-19536015 | None:intergenic | 15.0% |
| !! | ATATAAATAGCTTATACATA+AGG | - | chr1_4:19536487-19536506 | Msa0154770:intron | 15.0% |
| !! | TATAAATAGCTTATACATAA+GGG | - | chr1_4:19536488-19536507 | Msa0154770:intron | 15.0% |
| !!! | TCAAAAAGAAATAATTTTGA+AGG | + | chr1_4:19535423-19535442 | None:intergenic | 15.0% |
| !! | AATAATTCACAGATAAAATT+GGG | + | chr1_4:19535723-19535742 | None:intergenic | 15.0% |
| !! | ATCCAAATATTAGATTATAT+AGG | - | chr1_4:19535991-19536010 | Msa0154770:CDS | 15.0% |
| !! | AACCTATATAATCTAATATT+TGG | + | chr1_4:19535996-19536015 | None:intergenic | 15.0% |
| !! | ATATAAATAGCTTATACATA+AGG | - | chr1_4:19536487-19536506 | Msa0154770:intron | 15.0% |
| !! | TATAAATAGCTTATACATAA+GGG | - | chr1_4:19536488-19536507 | Msa0154770:intron | 15.0% |
| !!! | TTTTAGTAATACGAGATTTT+TGG | + | chr1_4:19535385-19535404 | None:intergenic | 20.0% |
| !! | GAATAATTCACAGATAAAAT+TGG | + | chr1_4:19535724-19535743 | None:intergenic | 20.0% |
| !!! | ACCATATATTAAACTTGTTT+CGG | - | chr1_4:19536128-19536147 | Msa0154770:intron | 20.0% |
| !! | TTGCTATAAATGTTTAGTTA+AGG | - | chr1_4:19536269-19536288 | Msa0154770:intron | 20.0% |
| !! | TGCTATAAATGTTTAGTTAA+GGG | - | chr1_4:19536270-19536289 | Msa0154770:intron | 20.0% |
| !! | ATAAGCTATTTATATAGCAA+AGG | + | chr1_4:19536482-19536501 | None:intergenic | 20.0% |
| !! | ACACATGATATCTTTAAATT+TGG | - | chr1_4:19536669-19536688 | Msa0154770:intron | 20.0% |
| !!! | TGATACAATTTTGATTTTAC+AGG | - | chr1_4:19537060-19537079 | Msa0154770:CDS | 20.0% |
| !!! | TTTTAGTAATACGAGATTTT+TGG | + | chr1_4:19535385-19535404 | None:intergenic | 20.0% |
| !! | GAATAATTCACAGATAAAAT+TGG | + | chr1_4:19535724-19535743 | None:intergenic | 20.0% |
| !!! | ACCATATATTAAACTTGTTT+CGG | - | chr1_4:19536128-19536147 | Msa0154770:intron | 20.0% |
| !! | TTGCTATAAATGTTTAGTTA+AGG | - | chr1_4:19536269-19536288 | Msa0154770:intron | 20.0% |
| !! | TGCTATAAATGTTTAGTTAA+GGG | - | chr1_4:19536270-19536289 | Msa0154770:intron | 20.0% |
| !! | ATAAGCTATTTATATAGCAA+AGG | + | chr1_4:19536482-19536501 | None:intergenic | 20.0% |
| !! | ACACATGATATCTTTAAATT+TGG | - | chr1_4:19536669-19536688 | Msa0154770:intron | 20.0% |
| !!! | TGATACAATTTTGATTTTAC+AGG | - | chr1_4:19537060-19537079 | Msa0154770:CDS | 20.0% |
| !!! | CTTATTTTGATGATTTTTCC+AGG | - | chr1_4:19535743-19535762 | Msa0154770:CDS | 25.0% |
| !! | CTTTTCATCTTATGAATCAA+AGG | - | chr1_4:19535776-19535795 | Msa0154770:intron | 25.0% |
| ! | TAGAGATAATGATCGAATTT+CGG | - | chr1_4:19535872-19535891 | Msa0154770:intron | 25.0% |
| !! | TTTTCTGATATAAGAATTCG+AGG | - | chr1_4:19535948-19535967 | Msa0154770:CDS | 25.0% |
| ! | TTTCTGATATAAGAATTCGA+GGG | - | chr1_4:19535949-19535968 | Msa0154770:CDS | 25.0% |
| ! | TCAACTAAATTAATCCAAAC+AGG | + | chr1_4:19536077-19536096 | None:intergenic | 25.0% |
| ! | ACCGAAACAAGTTTAATATA+TGG | + | chr1_4:19536132-19536151 | None:intergenic | 25.0% |
| ! | AATAAGCTATTTATCCAAAC+AGG | - | chr1_4:19536545-19536564 | Msa0154770:intron | 25.0% |
| ! | ATAAGCTATTTATCCAAACA+GGG | - | chr1_4:19536546-19536565 | Msa0154770:intron | 25.0% |
| !!! | TCATGCATTTTTTGTATTTC+AGG | - | chr1_4:19536728-19536747 | Msa0154770:intron | 25.0% |
| !! | AAAGACATATTTTACACCTT+TGG | + | chr1_4:19537161-19537180 | None:intergenic | 25.0% |
| ! | TGTAAAATATGTCTTTCGTT+CGG | - | chr1_4:19537165-19537184 | Msa0154770:intron | 25.0% |
| !! | TGTTATAATTTTGCTGAATC+TGG | - | chr1_4:19537354-19537373 | Msa0154770:CDS | 25.0% |
| !!! | CTTATTTTGATGATTTTTCC+AGG | - | chr1_4:19535743-19535762 | Msa0154770:CDS | 25.0% |
| !! | CTTTTCATCTTATGAATCAA+AGG | - | chr1_4:19535776-19535795 | Msa0154770:intron | 25.0% |
| ! | TAGAGATAATGATCGAATTT+CGG | - | chr1_4:19535872-19535891 | Msa0154770:intron | 25.0% |
| !! | TTTTCTGATATAAGAATTCG+AGG | - | chr1_4:19535948-19535967 | Msa0154770:CDS | 25.0% |
| ! | TTTCTGATATAAGAATTCGA+GGG | - | chr1_4:19535949-19535968 | Msa0154770:CDS | 25.0% |
| ! | TCAACTAAATTAATCCAAAC+AGG | + | chr1_4:19536077-19536096 | None:intergenic | 25.0% |
| ! | ACCGAAACAAGTTTAATATA+TGG | + | chr1_4:19536132-19536151 | None:intergenic | 25.0% |
| ! | AATAAGCTATTTATCCAAAC+AGG | - | chr1_4:19536545-19536564 | Msa0154770:intron | 25.0% |
| ! | ATAAGCTATTTATCCAAACA+GGG | - | chr1_4:19536546-19536565 | Msa0154770:intron | 25.0% |
| !!! | TCATGCATTTTTTGTATTTC+AGG | - | chr1_4:19536728-19536747 | Msa0154770:intron | 25.0% |
| !! | AAAGACATATTTTACACCTT+TGG | + | chr1_4:19537161-19537180 | None:intergenic | 25.0% |
| ! | TGTAAAATATGTCTTTCGTT+CGG | - | chr1_4:19537165-19537184 | Msa0154770:intron | 25.0% |
| !! | TGTTATAATTTTGCTGAATC+TGG | - | chr1_4:19537354-19537373 | Msa0154770:CDS | 25.0% |
| TTGATATCGAAGCTTACAAA+AGG | - | chr1_4:19535439-19535458 | Msa0154770:three_prime_UTR | 30.0% | |
| !!! | AAGATTGTTTTTGGGTTTGA+TGG | + | chr1_4:19535625-19535644 | None:intergenic | 30.0% |
| !! | GTGATGTGAAGATTGTTTTT+GGG | + | chr1_4:19535633-19535652 | None:intergenic | 30.0% |
| ! | AGTGATGTGAAGATTGTTTT+TGG | + | chr1_4:19535634-19535653 | None:intergenic | 30.0% |
| TGGGAAAAGAAAAAGAAGAA+GGG | + | chr1_4:19535704-19535723 | None:intergenic | 30.0% | |
| TTGGGAAAAGAAAAAGAAGA+AGG | + | chr1_4:19535705-19535724 | None:intergenic | 30.0% | |
| ATGAAAAGAAATTCTGAACC+TGG | + | chr1_4:19535764-19535783 | None:intergenic | 30.0% | |
| TTTACTCATCAAGGAAGTTT+AGG | - | chr1_4:19535828-19535847 | Msa0154770:intron | 30.0% | |
| !! | TGTTCTTGCTGATTCTATTT+GGG | - | chr1_4:19535905-19535924 | Msa0154770:CDS | 30.0% |
| TAGTTGTATAAGAACCTGTT+TGG | - | chr1_4:19536060-19536079 | Msa0154770:CDS | 30.0% | |
| TAAGCTATTTATCCAAACAG+GGG | - | chr1_4:19536547-19536566 | Msa0154770:intron | 30.0% | |
| CTAAGTTGTTTATGCAAACA+AGG | - | chr1_4:19536570-19536589 | Msa0154770:intron | 30.0% | |
| AAATGCATGACAATTAGTGA+AGG | + | chr1_4:19536718-19536737 | None:intergenic | 30.0% | |
| ! | TTGTATTTCAGGTACAAAGT+TGG | - | chr1_4:19536739-19536758 | Msa0154770:intron | 30.0% |
| ! | ACTTTGCTAGTTTATTTGAG+TGG | - | chr1_4:19536826-19536845 | Msa0154770:intron | 30.0% |
| !! | ATGTTGCTTAATGCAAGTTT+TGG | - | chr1_4:19537009-19537028 | Msa0154770:CDS | 30.0% |
| !! | TGTTGCTTAATGCAAGTTTT+GGG | - | chr1_4:19537010-19537029 | Msa0154770:CDS | 30.0% |
| ATACCAGAGAATTTGATACA+AGG | + | chr1_4:19537221-19537240 | None:intergenic | 30.0% | |
| ! | TGCAGTAGTTTAAAATCTAC+AGG | + | chr1_4:19537416-19537435 | None:intergenic | 30.0% |
| TTGATATCGAAGCTTACAAA+AGG | - | chr1_4:19535439-19535458 | Msa0154770:three_prime_UTR | 30.0% | |
| !!! | AAGATTGTTTTTGGGTTTGA+TGG | + | chr1_4:19535625-19535644 | None:intergenic | 30.0% |
| !! | GTGATGTGAAGATTGTTTTT+GGG | + | chr1_4:19535633-19535652 | None:intergenic | 30.0% |
| ! | AGTGATGTGAAGATTGTTTT+TGG | + | chr1_4:19535634-19535653 | None:intergenic | 30.0% |
| TGGGAAAAGAAAAAGAAGAA+GGG | + | chr1_4:19535704-19535723 | None:intergenic | 30.0% | |
| TTGGGAAAAGAAAAAGAAGA+AGG | + | chr1_4:19535705-19535724 | None:intergenic | 30.0% | |
| ATGAAAAGAAATTCTGAACC+TGG | + | chr1_4:19535764-19535783 | None:intergenic | 30.0% | |
| TTTACTCATCAAGGAAGTTT+AGG | - | chr1_4:19535828-19535847 | Msa0154770:intron | 30.0% | |
| !! | TGTTCTTGCTGATTCTATTT+GGG | - | chr1_4:19535905-19535924 | Msa0154770:CDS | 30.0% |
| TAGTTGTATAAGAACCTGTT+TGG | - | chr1_4:19536060-19536079 | Msa0154770:CDS | 30.0% | |
| TAAGCTATTTATCCAAACAG+GGG | - | chr1_4:19536547-19536566 | Msa0154770:intron | 30.0% | |
| CTAAGTTGTTTATGCAAACA+AGG | - | chr1_4:19536570-19536589 | Msa0154770:intron | 30.0% | |
| AAATGCATGACAATTAGTGA+AGG | + | chr1_4:19536718-19536737 | None:intergenic | 30.0% | |
| ! | TTGTATTTCAGGTACAAAGT+TGG | - | chr1_4:19536739-19536758 | Msa0154770:intron | 30.0% |
| ! | ACTTTGCTAGTTTATTTGAG+TGG | - | chr1_4:19536826-19536845 | Msa0154770:intron | 30.0% |
| !! | ATGTTGCTTAATGCAAGTTT+TGG | - | chr1_4:19537009-19537028 | Msa0154770:CDS | 30.0% |
| !! | TGTTGCTTAATGCAAGTTTT+GGG | - | chr1_4:19537010-19537029 | Msa0154770:CDS | 30.0% |
| ATACCAGAGAATTTGATACA+AGG | + | chr1_4:19537221-19537240 | None:intergenic | 30.0% | |
| ! | TGCAGTAGTTTAAAATCTAC+AGG | + | chr1_4:19537416-19537435 | None:intergenic | 30.0% |
| ATATCGAAGCTTACAAAAGG+CGG | - | chr1_4:19535442-19535461 | Msa0154770:three_prime_UTR | 35.0% | |
| GTAAGGAGGAAGAGAAAAAT+GGG | - | chr1_4:19535561-19535580 | Msa0154770:three_prime_UTR | 35.0% | |
| !!! | TTGTTTTTGGGTTTGATGGA+AGG | + | chr1_4:19535621-19535640 | None:intergenic | 35.0% |
| !!! | GGAATTGGTTTTACTCATCA+AGG | - | chr1_4:19535819-19535838 | Msa0154770:intron | 35.0% |
| CAAATAGAATCAGCAAGAAC+AGG | + | chr1_4:19535906-19535925 | None:intergenic | 35.0% | |
| !! | CTGTTCTTGCTGATTCTATT+TGG | - | chr1_4:19535904-19535923 | Msa0154770:CDS | 35.0% |
| GTAAGCTCTTTATGATAGCT+CGG | - | chr1_4:19536150-19536169 | Msa0154770:intron | 35.0% | |
| TAAGCTCTTTATGATAGCTC+GGG | - | chr1_4:19536151-19536170 | Msa0154770:intron | 35.0% | |
| TGTTTAGTTAAGGGTCTGTT+TGG | - | chr1_4:19536279-19536298 | Msa0154770:intron | 35.0% | |
| !! | TCTGTTTGGATTGACTTGTT+TGG | - | chr1_4:19536293-19536312 | Msa0154770:intron | 35.0% |
| !! | CTGTTTGGATTGACTTGTTT+GGG | - | chr1_4:19536294-19536313 | Msa0154770:intron | 35.0% |
| ! | ACTTGTTTGGGTTTATCTAC+CGG | - | chr1_4:19536306-19536325 | Msa0154770:intron | 35.0% |
| !! | GCTGTTTTCATAAGCTATCT+TGG | + | chr1_4:19536422-19536441 | None:intergenic | 35.0% |
| ATCGATGAGAGTAATGATCT+TGG | - | chr1_4:19536781-19536800 | Msa0154770:intron | 35.0% | |
| ! | TTGCTAGTTTATTTGAGTGG+CGG | - | chr1_4:19536829-19536848 | Msa0154770:intron | 35.0% |
| TCATCTTCTGATCGTTTAGT+TGG | - | chr1_4:19536904-19536923 | Msa0154770:CDS | 35.0% | |
| TGGTTCAAGAAATAGCATTG+TGG | - | chr1_4:19536945-19536964 | Msa0154770:CDS | 35.0% | |
| ATGTCACTATTTGCTTGCTT+TGG | - | chr1_4:19537033-19537052 | Msa0154770:CDS | 35.0% | |
| TGTCACTATTTGCTTGCTTT+GGG | - | chr1_4:19537034-19537053 | Msa0154770:CDS | 35.0% | |
| ! | TACACCTTTGGTAACATTTC+TGG | + | chr1_4:19537149-19537168 | None:intergenic | 35.0% |
| ATGCCTTGTATCAAATTCTC+TGG | - | chr1_4:19537215-19537234 | Msa0154770:CDS | 35.0% | |
| CTGGTATATTCTTCATCTGA+AGG | - | chr1_4:19537234-19537253 | Msa0154770:CDS | 35.0% | |
| ATATCGAAGCTTACAAAAGG+CGG | - | chr1_4:19535442-19535461 | Msa0154770:three_prime_UTR | 35.0% | |
| GTAAGGAGGAAGAGAAAAAT+GGG | - | chr1_4:19535561-19535580 | Msa0154770:three_prime_UTR | 35.0% | |
| !!! | TTGTTTTTGGGTTTGATGGA+AGG | + | chr1_4:19535621-19535640 | None:intergenic | 35.0% |
| !!! | GGAATTGGTTTTACTCATCA+AGG | - | chr1_4:19535819-19535838 | Msa0154770:intron | 35.0% |
| CAAATAGAATCAGCAAGAAC+AGG | + | chr1_4:19535906-19535925 | None:intergenic | 35.0% | |
| !! | CTGTTCTTGCTGATTCTATT+TGG | - | chr1_4:19535904-19535923 | Msa0154770:CDS | 35.0% |
| GTAAGCTCTTTATGATAGCT+CGG | - | chr1_4:19536150-19536169 | Msa0154770:intron | 35.0% | |
| TAAGCTCTTTATGATAGCTC+GGG | - | chr1_4:19536151-19536170 | Msa0154770:intron | 35.0% | |
| TGTTTAGTTAAGGGTCTGTT+TGG | - | chr1_4:19536279-19536298 | Msa0154770:intron | 35.0% | |
| !! | TCTGTTTGGATTGACTTGTT+TGG | - | chr1_4:19536293-19536312 | Msa0154770:intron | 35.0% |
| !! | CTGTTTGGATTGACTTGTTT+GGG | - | chr1_4:19536294-19536313 | Msa0154770:intron | 35.0% |
| ! | ACTTGTTTGGGTTTATCTAC+CGG | - | chr1_4:19536306-19536325 | Msa0154770:intron | 35.0% |
| !! | GCTGTTTTCATAAGCTATCT+TGG | + | chr1_4:19536422-19536441 | None:intergenic | 35.0% |
| ATCGATGAGAGTAATGATCT+TGG | - | chr1_4:19536781-19536800 | Msa0154770:intron | 35.0% | |
| ! | TTGCTAGTTTATTTGAGTGG+CGG | - | chr1_4:19536829-19536848 | Msa0154770:intron | 35.0% |
| TCATCTTCTGATCGTTTAGT+TGG | - | chr1_4:19536904-19536923 | Msa0154770:CDS | 35.0% | |
| TGGTTCAAGAAATAGCATTG+TGG | - | chr1_4:19536945-19536964 | Msa0154770:CDS | 35.0% | |
| ATGTCACTATTTGCTTGCTT+TGG | - | chr1_4:19537033-19537052 | Msa0154770:CDS | 35.0% | |
| TGTCACTATTTGCTTGCTTT+GGG | - | chr1_4:19537034-19537053 | Msa0154770:CDS | 35.0% | |
| ! | TACACCTTTGGTAACATTTC+TGG | + | chr1_4:19537149-19537168 | None:intergenic | 35.0% |
| ATGCCTTGTATCAAATTCTC+TGG | - | chr1_4:19537215-19537234 | Msa0154770:CDS | 35.0% | |
| CTGGTATATTCTTCATCTGA+AGG | - | chr1_4:19537234-19537253 | Msa0154770:CDS | 35.0% | |
| ! | AAGAGAGGTATATCGTCAAG+CGG | - | chr1_4:19535475-19535494 | Msa0154770:three_prime_UTR | 40.0% |
| GTGTGTATCGTTCCTCTATT+TGG | + | chr1_4:19535521-19535540 | None:intergenic | 40.0% | |
| CGTAAGGAGGAAGAGAAAAA+TGG | - | chr1_4:19535560-19535579 | Msa0154770:three_prime_UTR | 40.0% | |
| AAACAACAACCGACCCAAAA+TGG | - | chr1_4:19535595-19535614 | Msa0154770:three_prime_UTR | 40.0% | |
| !! | GTTTGATGGAAGGCCATTTT+GGG | + | chr1_4:19535611-19535630 | None:intergenic | 40.0% |
| ACGAGATTTCGATCTCTTCA+CGG | - | chr1_4:19535659-19535678 | Msa0154770:exon | 40.0% | |
| GCATTCATTGAAACTGCTGA+GGG | - | chr1_4:19535798-19535817 | Msa0154770:intron | 40.0% | |
| ATTGAAACTGCTGAGGGAAT+TGG | - | chr1_4:19535804-19535823 | Msa0154770:intron | 40.0% | |
| ! | GCTGATTCTATTTGGGATTC+TGG | - | chr1_4:19535912-19535931 | Msa0154770:CDS | 40.0% |
| CAGTCTCGGAAAATTTCTAC+CGG | + | chr1_4:19536328-19536347 | None:intergenic | 40.0% | |
| ! | GAAATTTTCCGAGACTGTTC+AGG | - | chr1_4:19536331-19536350 | Msa0154770:intron | 40.0% |
| TATGTTCTCCTGAACAGTCT+CGG | + | chr1_4:19536342-19536361 | None:intergenic | 40.0% | |
| TAAACAACTTAGCCCCTGTT+TGG | + | chr1_4:19536562-19536581 | None:intergenic | 40.0% | |
| ! | TCAGGTACAAAGTTGGTCAA+CGG | - | chr1_4:19536746-19536765 | Msa0154770:intron | 40.0% |
| ! | TACAAAGTTGGTCAACGGTT+TGG | - | chr1_4:19536751-19536770 | Msa0154770:intron | 40.0% |
| GAGAGTAATGATCTTGGAGA+TGG | - | chr1_4:19536787-19536806 | Msa0154770:intron | 40.0% | |
| ACCTGGTGAAGTTAAATCCA+AGG | - | chr1_4:19536852-19536871 | Msa0154770:intron | 40.0% | |
| !!! | GCTGGAATCATTTTTAGCCT+TGG | + | chr1_4:19536872-19536891 | None:intergenic | 40.0% |
| AGATGAATCTGTAGGTTTGC+TGG | + | chr1_4:19536890-19536909 | None:intergenic | 40.0% | |
| CGATCAGAAGATGAATCTGT+AGG | + | chr1_4:19536898-19536917 | None:intergenic | 40.0% | |
| TCTTCTGATCGTTTAGTTGG+AGG | - | chr1_4:19536907-19536926 | Msa0154770:CDS | 40.0% | |
| AAGAAATAGCATTGTGGCTG+AGG | - | chr1_4:19536951-19536970 | Msa0154770:CDS | 40.0% | |
| GAAGCCAGAAATGTTACCAA+AGG | - | chr1_4:19537142-19537161 | Msa0154770:intron | 40.0% | |
| TCGGATGTTGTATTTGCTTG+AGG | - | chr1_4:19537184-19537203 | Msa0154770:intron | 40.0% | |
| ! | AAGAGAGGTATATCGTCAAG+CGG | - | chr1_4:19535475-19535494 | Msa0154770:three_prime_UTR | 40.0% |
| GTGTGTATCGTTCCTCTATT+TGG | + | chr1_4:19535521-19535540 | None:intergenic | 40.0% | |
| CGTAAGGAGGAAGAGAAAAA+TGG | - | chr1_4:19535560-19535579 | Msa0154770:three_prime_UTR | 40.0% | |
| AAACAACAACCGACCCAAAA+TGG | - | chr1_4:19535595-19535614 | Msa0154770:three_prime_UTR | 40.0% | |
| !! | GTTTGATGGAAGGCCATTTT+GGG | + | chr1_4:19535611-19535630 | None:intergenic | 40.0% |
| ACGAGATTTCGATCTCTTCA+CGG | - | chr1_4:19535659-19535678 | Msa0154770:exon | 40.0% | |
| GCATTCATTGAAACTGCTGA+GGG | - | chr1_4:19535798-19535817 | Msa0154770:intron | 40.0% | |
| ATTGAAACTGCTGAGGGAAT+TGG | - | chr1_4:19535804-19535823 | Msa0154770:intron | 40.0% | |
| ! | GCTGATTCTATTTGGGATTC+TGG | - | chr1_4:19535912-19535931 | Msa0154770:CDS | 40.0% |
| CAGTCTCGGAAAATTTCTAC+CGG | + | chr1_4:19536328-19536347 | None:intergenic | 40.0% | |
| ! | GAAATTTTCCGAGACTGTTC+AGG | - | chr1_4:19536331-19536350 | Msa0154770:intron | 40.0% |
| TATGTTCTCCTGAACAGTCT+CGG | + | chr1_4:19536342-19536361 | None:intergenic | 40.0% | |
| TAAACAACTTAGCCCCTGTT+TGG | + | chr1_4:19536562-19536581 | None:intergenic | 40.0% | |
| ! | TCAGGTACAAAGTTGGTCAA+CGG | - | chr1_4:19536746-19536765 | Msa0154770:intron | 40.0% |
| ! | TACAAAGTTGGTCAACGGTT+TGG | - | chr1_4:19536751-19536770 | Msa0154770:intron | 40.0% |
| GAGAGTAATGATCTTGGAGA+TGG | - | chr1_4:19536787-19536806 | Msa0154770:intron | 40.0% | |
| ACCTGGTGAAGTTAAATCCA+AGG | - | chr1_4:19536852-19536871 | Msa0154770:intron | 40.0% | |
| !!! | GCTGGAATCATTTTTAGCCT+TGG | + | chr1_4:19536872-19536891 | None:intergenic | 40.0% |
| AGATGAATCTGTAGGTTTGC+TGG | + | chr1_4:19536890-19536909 | None:intergenic | 40.0% | |
| CGATCAGAAGATGAATCTGT+AGG | + | chr1_4:19536898-19536917 | None:intergenic | 40.0% | |
| TCTTCTGATCGTTTAGTTGG+AGG | - | chr1_4:19536907-19536926 | Msa0154770:CDS | 40.0% | |
| AAGAAATAGCATTGTGGCTG+AGG | - | chr1_4:19536951-19536970 | Msa0154770:CDS | 40.0% | |
| GAAGCCAGAAATGTTACCAA+AGG | - | chr1_4:19537142-19537161 | Msa0154770:intron | 40.0% | |
| TCGGATGTTGTATTTGCTTG+AGG | - | chr1_4:19537184-19537203 | Msa0154770:intron | 40.0% | |
| ATATCGTCAAGCGGTTCTTC+AGG | - | chr1_4:19535484-19535503 | Msa0154770:three_prime_UTR | 45.0% | |
| TATCGTCAAGCGGTTCTTCA+GGG | - | chr1_4:19535485-19535504 | Msa0154770:three_prime_UTR | 45.0% | |
| ! | GGTTTGATGGAAGGCCATTT+TGG | + | chr1_4:19535612-19535631 | None:intergenic | 45.0% |
| GGCATTCATTGAAACTGCTG+AGG | - | chr1_4:19535797-19535816 | Msa0154770:intron | 45.0% | |
| CTATAAGCTTCACCTTTCGC+TGG | + | chr1_4:19535855-19535874 | None:intergenic | 45.0% | |
| ! | GCCTTGGATTTAACTTCACC+AGG | + | chr1_4:19536856-19536875 | None:intergenic | 45.0% |
| GGAGGAGAAACAGTCTTCTA+TGG | - | chr1_4:19536925-19536944 | Msa0154770:CDS | 45.0% | |
| TTACAGGTTGCTCCCATTGA+AGG | - | chr1_4:19537076-19537095 | Msa0154770:CDS | 45.0% | |
| TACAGGTTGCTCCCATTGAA+GGG | - | chr1_4:19537077-19537096 | Msa0154770:CDS | 45.0% | |
| !! | AAGAGTGCCATCCCTTCAAT+GGG | + | chr1_4:19537091-19537110 | None:intergenic | 45.0% |
| ATGGCACTCTTGCACATTCA+TGG | - | chr1_4:19537100-19537119 | Msa0154770:intron | 45.0% | |
| ATATCGTCAAGCGGTTCTTC+AGG | - | chr1_4:19535484-19535503 | Msa0154770:three_prime_UTR | 45.0% | |
| TATCGTCAAGCGGTTCTTCA+GGG | - | chr1_4:19535485-19535504 | Msa0154770:three_prime_UTR | 45.0% | |
| ! | GGTTTGATGGAAGGCCATTT+TGG | + | chr1_4:19535612-19535631 | None:intergenic | 45.0% |
| GGCATTCATTGAAACTGCTG+AGG | - | chr1_4:19535797-19535816 | Msa0154770:intron | 45.0% | |
| CTATAAGCTTCACCTTTCGC+TGG | + | chr1_4:19535855-19535874 | None:intergenic | 45.0% | |
| ! | GCCTTGGATTTAACTTCACC+AGG | + | chr1_4:19536856-19536875 | None:intergenic | 45.0% |
| GGAGGAGAAACAGTCTTCTA+TGG | - | chr1_4:19536925-19536944 | Msa0154770:CDS | 45.0% | |
| TTACAGGTTGCTCCCATTGA+AGG | - | chr1_4:19537076-19537095 | Msa0154770:CDS | 45.0% | |
| TACAGGTTGCTCCCATTGAA+GGG | - | chr1_4:19537077-19537096 | Msa0154770:CDS | 45.0% | |
| !! | AAGAGTGCCATCCCTTCAAT+GGG | + | chr1_4:19537091-19537110 | None:intergenic | 45.0% |
| ATGGCACTCTTGCACATTCA+TGG | - | chr1_4:19537100-19537119 | Msa0154770:intron | 45.0% | |
| GGAGCGACGAAACCAAATAG+AGG | - | chr1_4:19535506-19535525 | Msa0154770:three_prime_UTR | 50.0% | |
| AGGAACGATACACACCTCGT+AGG | - | chr1_4:19535526-19535545 | Msa0154770:three_prime_UTR | 50.0% | |
| GGAACGATACACACCTCGTA+GGG | - | chr1_4:19535527-19535546 | Msa0154770:three_prime_UTR | 50.0% | |
| !! | GATGGAAGGCCATTTTGGGT+CGG | + | chr1_4:19535607-19535626 | None:intergenic | 50.0% |
| GGAAGTTTAGGTCCAGCGAA+AGG | - | chr1_4:19535840-19535859 | Msa0154770:intron | 50.0% | |
| ATTCGAGGGAAAGCTGCTGT+AGG | - | chr1_4:19535963-19535982 | Msa0154770:CDS | 50.0% | |
| !! | GTTTATTTGAGTGGCGGACC+TGG | - | chr1_4:19536835-19536854 | Msa0154770:intron | 50.0% |
| !! | CAAGAGTGCCATCCCTTCAA+TGG | + | chr1_4:19537092-19537111 | None:intergenic | 50.0% |
| GGAGCGACGAAACCAAATAG+AGG | - | chr1_4:19535506-19535525 | Msa0154770:three_prime_UTR | 50.0% | |
| AGGAACGATACACACCTCGT+AGG | - | chr1_4:19535526-19535545 | Msa0154770:three_prime_UTR | 50.0% | |
| GGAACGATACACACCTCGTA+GGG | - | chr1_4:19535527-19535546 | Msa0154770:three_prime_UTR | 50.0% | |
| !! | GATGGAAGGCCATTTTGGGT+CGG | + | chr1_4:19535607-19535626 | None:intergenic | 50.0% |
| GGAAGTTTAGGTCCAGCGAA+AGG | - | chr1_4:19535840-19535859 | Msa0154770:intron | 50.0% | |
| ATTCGAGGGAAAGCTGCTGT+AGG | - | chr1_4:19535963-19535982 | Msa0154770:CDS | 50.0% | |
| !! | GTTTATTTGAGTGGCGGACC+TGG | - | chr1_4:19536835-19536854 | Msa0154770:intron | 50.0% |
| !! | CAAGAGTGCCATCCCTTCAA+TGG | + | chr1_4:19537092-19537111 | None:intergenic | 50.0% |
| ! | GGCGGTCTGAAATCGAAGAG+AGG | - | chr1_4:19535460-19535479 | Msa0154770:three_prime_UTR | 55.0% |
| ACGATACACACCTCGTAGGG+AGG | - | chr1_4:19535530-19535549 | Msa0154770:three_prime_UTR | 55.0% | |
| TACACACCTCGTAGGGAGGA+AGG | - | chr1_4:19535534-19535553 | Msa0154770:three_prime_UTR | 55.0% | |
| ACACACCTCGTAGGGAGGAA+GGG | - | chr1_4:19535535-19535554 | Msa0154770:three_prime_UTR | 55.0% | |
| GGTTGCTCCCATTGAAGGGA+TGG | - | chr1_4:19537081-19537100 | Msa0154770:CDS | 55.0% | |
| ! | GGCGGTCTGAAATCGAAGAG+AGG | - | chr1_4:19535460-19535479 | Msa0154770:three_prime_UTR | 55.0% |
| ACGATACACACCTCGTAGGG+AGG | - | chr1_4:19535530-19535549 | Msa0154770:three_prime_UTR | 55.0% | |
| TACACACCTCGTAGGGAGGA+AGG | - | chr1_4:19535534-19535553 | Msa0154770:three_prime_UTR | 55.0% | |
| ACACACCTCGTAGGGAGGAA+GGG | - | chr1_4:19535535-19535554 | Msa0154770:three_prime_UTR | 55.0% | |
| GGTTGCTCCCATTGAAGGGA+TGG | - | chr1_4:19537081-19537100 | Msa0154770:CDS | 55.0% | |
| ! | GTAGGGAGGAAGGGAGCGTA+AGG | - | chr1_4:19535544-19535563 | Msa0154770:three_prime_UTR | 60.0% |
| ! | GTAGGGAGGAAGGGAGCGTA+AGG | - | chr1_4:19535544-19535563 | Msa0154770:three_prime_UTR | 60.0% |
| ACGCTCCCTTCCTCCCTACG+AGG | + | chr1_4:19535543-19535562 | None:intergenic | 65.0% | |
| ! | GGGAGGAAGGGAGCGTAAGG+AGG | - | chr1_4:19535547-19535566 | Msa0154770:three_prime_UTR | 65.0% |
| ACGCTCCCTTCCTCCCTACG+AGG | + | chr1_4:19535543-19535562 | None:intergenic | 65.0% | |
| ! | GGGAGGAAGGGAGCGTAAGG+AGG | - | chr1_4:19535547-19535566 | Msa0154770:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 19535373 | 19537496 | 19535373 | ID=Msa0154770;Name=Msa0154770 |
| chr1_4 | mRNA | 19535373 | 19537496 | 19535373 | ID=Msa0154770-mRNA-1;Parent=Msa0154770;Name=Msa0154770-mRNA-1;_AED=0.19;_eAED=0.19;_QI=41|1|1|1|1|1|4|292|286 |
| chr1_4 | exon | 19535373 | 19535787 | 19535373 | ID=Msa0154770-mRNA-1:exon:7193;Parent=Msa0154770-mRNA-1 |
| chr1_4 | exon | 19535897 | 19536119 | 19535897 | ID=Msa0154770-mRNA-1:exon:7192;Parent=Msa0154770-mRNA-1 |
| chr1_4 | exon | 19536857 | 19537104 | 19536857 | ID=Msa0154770-mRNA-1:exon:7191;Parent=Msa0154770-mRNA-1 |
| chr1_4 | exon | 19537189 | 19537496 | 19537189 | ID=Msa0154770-mRNA-1:exon:7190;Parent=Msa0154770-mRNA-1 |
| chr1_4 | five_prime_UTR | 19537456 | 19537496 | 19537456 | ID=Msa0154770-mRNA-1:five_prime_utr;Parent=Msa0154770-mRNA-1 |
| chr1_4 | CDS | 19537189 | 19537455 | 19537189 | ID=Msa0154770-mRNA-1:cds;Parent=Msa0154770-mRNA-1 |
| chr1_4 | CDS | 19536857 | 19537104 | 19536857 | ID=Msa0154770-mRNA-1:cds;Parent=Msa0154770-mRNA-1 |
| chr1_4 | CDS | 19535897 | 19536119 | 19535897 | ID=Msa0154770-mRNA-1:cds;Parent=Msa0154770-mRNA-1 |
| chr1_4 | CDS | 19535665 | 19535787 | 19535665 | ID=Msa0154770-mRNA-1:cds;Parent=Msa0154770-mRNA-1 |
| chr1_4 | three_prime_UTR | 19535373 | 19535664 | 19535373 | ID=Msa0154770-mRNA-1:three_prime_utr;Parent=Msa0154770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
