Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979530 | XP_003618859.1 | 93.609 | 266 | 16 | 1 | 13 | 277 | 1 | 266 | 0.0 | 509 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979530 | sp|A0A3Q8GYY4|NEPS2_NEPRA | 56.522 | 253 | 107 | 2 | 25 | 274 | 7 | 259 | 2.89e-93 | 279 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979530 | G7KNQ4 | 93.609 | 266 | 16 | 1 | 13 | 277 | 1 | 266 | 0.0 | 509 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025570 | Msa0979530 | 0.807851 | 4.131062e-50 | -8.615850e-47 |
| Msa0044780 | Msa0979530 | -0.817595 | 3.039419e-52 | -8.615850e-47 |
| Msa0045810 | Msa0979530 | 0.811887 | 5.591405e-51 | -8.615850e-47 |
| Msa0046200 | Msa0979530 | 0.802733 | 4.876200e-49 | -8.615850e-47 |
| Msa0106540 | Msa0979530 | 0.802506 | 5.430763e-49 | -8.615850e-47 |
| Msa0758780 | Msa0979530 | -0.802259 | 6.108360e-49 | -8.615850e-47 |
| Msa0790650 | Msa0979530 | -0.804789 | 1.824541e-49 | -8.615850e-47 |
| Msa0838620 | Msa0979530 | -0.807553 | 4.777458e-50 | -8.615850e-47 |
| Msa0136180 | Msa0979530 | -0.810214 | 1.288283e-50 | -8.615850e-47 |
| Msa0371350 | Msa0979530 | -0.803221 | 3.865701e-49 | -8.615850e-47 |
| Msa0412580 | Msa0979530 | -0.800635 | 1.313710e-48 | -8.615850e-47 |
| Msa0437480 | Msa0979530 | 0.803222 | 3.864733e-49 | -8.615850e-47 |
| Msa0354840 | Msa0979530 | 0.818984 | 1.473427e-52 | -8.615850e-47 |
| Msa0484210 | Msa0979530 | -0.803407 | 3.537114e-49 | -8.615850e-47 |
| Msa0567330 | Msa0979530 | 0.810916 | 9.086577e-51 | -8.615850e-47 |
| Msa0567570 | Msa0979530 | 0.805101 | 1.570738e-49 | -8.615850e-47 |
| Msa0880850 | Msa0979530 | 0.805026 | 1.628366e-49 | -8.615850e-47 |
| Msa0880910 | Msa0979530 | 0.810617 | 1.054248e-50 | -8.615850e-47 |
| Msa0967780 | Msa0979530 | 0.810413 | 1.166957e-50 | -8.615850e-47 |
| Msa0979530 | Msa1022420 | 0.817781 | 2.759180e-52 | -8.615850e-47 |
| Msa0979530 | Msa1029820 | 0.800856 | 1.184568e-48 | -8.615850e-47 |
| Msa0979530 | Msa1041060 | 0.801139 | 1.036804e-48 | -8.615850e-47 |
| Msa0979530 | Msa1042300 | 0.814597 | 1.420762e-51 | -8.615850e-47 |
| Msa0979530 | Msa1044250 | 0.828105 | 1.081592e-54 | -8.615850e-47 |
| Msa0979530 | Msa1127200 | 0.807699 | 4.450020e-50 | -8.615850e-47 |
| Msa0979530 | Msa1133440 | -0.802412 | 5.679033e-49 | -8.615850e-47 |
| Msa0979530 | Msa1149910 | 0.811893 | 5.575224e-51 | -8.615850e-47 |
| Msa0979530 | Msa1165460 | 0.814102 | 1.827467e-51 | -8.615850e-47 |
| Msa0979530 | Msa1192360 | 0.824476 | 7.906834e-54 | -8.615850e-47 |
| Msa0979530 | Msa1217890 | 0.806218 | 9.152593e-50 | -8.615850e-47 |
| Msa0979530 | Msa1246830 | 0.826721 | 2.322316e-54 | -8.615850e-47 |
| Msa0979530 | Msa1288070 | 0.812467 | 4.179019e-51 | -8.615850e-47 |
| Msa0979530 | Msa1405830 | 0.802221 | 6.218188e-49 | -8.615850e-47 |
| Msa0979530 | Msa1407810 | 0.807017 | 6.207669e-50 | -8.615850e-47 |
| Msa0979530 | Msa1421630 | 0.812458 | 4.197603e-51 | -8.615850e-47 |
| Msa0979530 | Msa1433360 | 0.807821 | 4.191625e-50 | -8.615850e-47 |
| Msa0979530 | Msa1437780 | 0.808394 | 3.165215e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979530 | MtrunA17_Chr6g0459301 | 93.609 | 266 | 16 | 1 | 13 | 277 | 1 | 266 | 0.0 | 509 |
| Msa0979530 | MtrunA17_Chr6g0459261 | 84.074 | 270 | 43 | 0 | 8 | 277 | 8 | 277 | 3.47e-168 | 466 |
| Msa0979530 | MtrunA17_Chr6g0459271 | 85.660 | 265 | 38 | 0 | 13 | 277 | 1 | 265 | 1.86e-159 | 444 |
| Msa0979530 | MtrunA17_Chr6g0459331 | 85.441 | 261 | 38 | 0 | 13 | 273 | 1 | 261 | 4.53e-157 | 437 |
| Msa0979530 | MtrunA17_Chr6g0459281 | 72.453 | 265 | 73 | 0 | 13 | 277 | 1 | 265 | 1.60e-142 | 401 |
| Msa0979530 | MtrunA17_Chr6g0459351 | 72.453 | 265 | 73 | 0 | 13 | 277 | 1 | 265 | 2.30e-138 | 390 |
| Msa0979530 | MtrunA17_Chr7g0270441 | 50.593 | 253 | 124 | 1 | 21 | 273 | 2 | 253 | 3.88e-83 | 250 |
| Msa0979530 | MtrunA17_Chr7g0266981 | 49.425 | 261 | 130 | 2 | 13 | 273 | 1 | 259 | 7.45e-80 | 242 |
| Msa0979530 | MtrunA17_Chr4g0044111 | 49.042 | 261 | 131 | 2 | 13 | 273 | 1 | 259 | 5.76e-79 | 240 |
| Msa0979530 | MtrunA17_Chr7g0270451 | 48.800 | 250 | 126 | 2 | 24 | 273 | 5 | 252 | 2.84e-78 | 238 |
| Msa0979530 | MtrunA17_Chr2g0324021 | 47.036 | 253 | 132 | 2 | 21 | 273 | 2 | 252 | 4.58e-78 | 237 |
| Msa0979530 | MtrunA17_Chr7g0266891 | 49.398 | 249 | 124 | 2 | 25 | 273 | 7 | 253 | 1.35e-75 | 231 |
| Msa0979530 | MtrunA17_Chr4g0026001 | 47.036 | 253 | 129 | 3 | 24 | 276 | 13 | 260 | 1.77e-72 | 223 |
| Msa0979530 | MtrunA17_Chr4g0025971 | 46.094 | 256 | 133 | 3 | 17 | 272 | 6 | 256 | 1.93e-72 | 223 |
| Msa0979530 | MtrunA17_Chr4g0025981 | 46.939 | 245 | 125 | 3 | 27 | 271 | 43 | 282 | 1.86e-70 | 220 |
| Msa0979530 | MtrunA17_Chr7g0244061 | 44.118 | 272 | 130 | 5 | 21 | 273 | 25 | 293 | 1.92e-68 | 214 |
| Msa0979530 | MtrunA17_Chr4g0040371 | 42.701 | 274 | 144 | 4 | 9 | 273 | 1 | 270 | 1.61e-63 | 201 |
| Msa0979530 | MtrunA17_Chr7g0268591 | 38.889 | 288 | 161 | 6 | 2 | 277 | 3 | 287 | 4.18e-62 | 197 |
| Msa0979530 | MtrunA17_Chr4g0044131 | 41.200 | 250 | 145 | 2 | 24 | 273 | 7 | 254 | 6.67e-62 | 196 |
| Msa0979530 | MtrunA17_Chr7g0252031 | 42.969 | 256 | 137 | 6 | 24 | 273 | 34 | 286 | 3.62e-61 | 195 |
| Msa0979530 | MtrunA17_Chr3g0084871 | 41.328 | 271 | 138 | 6 | 16 | 273 | 7 | 269 | 1.17e-55 | 181 |
| Msa0979530 | MtrunA17_Chr7g0267011 | 44.974 | 189 | 102 | 2 | 24 | 212 | 7 | 193 | 1.36e-51 | 167 |
| Msa0979530 | MtrunA17_Chr7g0267001 | 37.600 | 250 | 136 | 3 | 24 | 273 | 7 | 236 | 1.15e-49 | 164 |
| Msa0979530 | MtrunA17_Chr6g0463951 | 50.299 | 167 | 82 | 1 | 107 | 273 | 1 | 166 | 5.61e-48 | 157 |
| Msa0979530 | MtrunA17_Chr7g0266991 | 42.424 | 231 | 114 | 3 | 24 | 254 | 24 | 235 | 1.57e-47 | 158 |
| Msa0979530 | MtrunA17_Chr7g0270471 | 46.809 | 141 | 75 | 0 | 133 | 273 | 1 | 141 | 3.12e-40 | 137 |
| Msa0979530 | MtrunA17_Chr4g0044121 | 43.114 | 167 | 94 | 1 | 107 | 273 | 1 | 166 | 2.34e-36 | 127 |
| Msa0979530 | MtrunA17_Chr7g0272961 | 33.333 | 264 | 151 | 8 | 24 | 274 | 39 | 290 | 2.79e-31 | 117 |
| Msa0979530 | MtrunA17_Chr1g0191751 | 34.457 | 267 | 150 | 10 | 21 | 274 | 97 | 351 | 1.19e-30 | 117 |
| Msa0979530 | MtrunA17_Chr7g0270461 | 54.369 | 103 | 46 | 1 | 24 | 126 | 45 | 146 | 5.59e-28 | 105 |
| Msa0979530 | MtrunA17_Chr4g0074511 | 31.111 | 270 | 158 | 8 | 20 | 274 | 35 | 291 | 3.73e-27 | 107 |
| Msa0979530 | MtrunA17_Chr4g0075531 | 31.621 | 253 | 160 | 6 | 24 | 273 | 6 | 248 | 1.81e-26 | 103 |
| Msa0979530 | MtrunA17_Chr3g0122901 | 29.151 | 271 | 168 | 9 | 13 | 274 | 64 | 319 | 8.59e-26 | 103 |
| Msa0979530 | MtrunA17_Chr7g0259521 | 30.916 | 262 | 167 | 6 | 21 | 275 | 2 | 256 | 1.90e-25 | 101 |
| Msa0979530 | MtrunA17_Chr3g0142651 | 42.202 | 109 | 62 | 1 | 107 | 215 | 1 | 108 | 2.49e-24 | 95.1 |
| Msa0979530 | MtrunA17_Chr0c30g0494101 | 30.627 | 271 | 156 | 9 | 20 | 274 | 35 | 289 | 1.50e-23 | 97.1 |
| Msa0979530 | MtrunA17_Chr7g0259531 | 31.801 | 261 | 160 | 8 | 22 | 273 | 8 | 259 | 4.28e-22 | 92.8 |
| Msa0979530 | MtrunA17_Chr1g0182511 | 29.845 | 258 | 170 | 5 | 23 | 274 | 12 | 264 | 5.24e-18 | 81.6 |
| Msa0979530 | MtrunA17_Chr7g0239481 | 28.846 | 260 | 177 | 6 | 19 | 274 | 9 | 264 | 7.79e-18 | 80.9 |
| Msa0979530 | MtrunA17_Chr4g0028911 | 25.984 | 254 | 179 | 6 | 25 | 272 | 11 | 261 | 9.93e-17 | 78.2 |
| Msa0979530 | MtrunA17_Chr7g0239501 | 27.376 | 263 | 175 | 7 | 19 | 273 | 10 | 264 | 2.04e-16 | 77.0 |
| Msa0979530 | MtrunA17_Chr4g0028921 | 26.255 | 259 | 172 | 7 | 25 | 272 | 11 | 261 | 2.73e-16 | 77.0 |
| Msa0979530 | MtrunA17_Chr7g0239491 | 26.641 | 259 | 181 | 7 | 19 | 273 | 9 | 262 | 8.99e-16 | 75.1 |
| Msa0979530 | MtrunA17_Chr4g0032181 | 28.351 | 194 | 130 | 5 | 82 | 273 | 59 | 245 | 2.47e-15 | 73.9 |
| Msa0979530 | MtrunA17_Chr6g0459341 | 67.308 | 52 | 17 | 0 | 13 | 64 | 1 | 52 | 3.37e-15 | 70.1 |
| Msa0979530 | MtrunA17_Chr3g0112261 | 28.727 | 275 | 177 | 10 | 13 | 276 | 1 | 267 | 3.97e-15 | 73.6 |
| Msa0979530 | MtrunA17_Chr3g0112141 | 28.409 | 264 | 155 | 10 | 25 | 273 | 17 | 261 | 6.55e-15 | 73.2 |
| Msa0979530 | MtrunA17_Chr7g0239511 | 26.616 | 263 | 177 | 7 | 19 | 273 | 10 | 264 | 1.09e-14 | 72.4 |
| Msa0979530 | MtrunA17_Chr3g0112171 | 28.364 | 275 | 163 | 10 | 14 | 273 | 4 | 259 | 1.12e-14 | 72.4 |
| Msa0979530 | MtrunA17_Chr3g0112271 | 27.612 | 268 | 160 | 9 | 21 | 273 | 13 | 261 | 8.69e-14 | 69.7 |
| Msa0979530 | MtrunA17_Chr4g0045041 | 28.365 | 208 | 129 | 6 | 26 | 218 | 5 | 207 | 1.47e-13 | 70.5 |
| Msa0979530 | MtrunA17_Chr1g0171831 | 24.303 | 251 | 176 | 6 | 24 | 263 | 13 | 260 | 1.40e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979530 | AT2G47140.1 | 49.407 | 253 | 126 | 2 | 21 | 273 | 2 | 252 | 5.74e-81 | 245 |
| Msa0979530 | AT3G29260.1 | 50.000 | 256 | 119 | 5 | 21 | 273 | 2 | 251 | 1.03e-73 | 226 |
| Msa0979530 | AT3G29250.2 | 47.826 | 253 | 130 | 2 | 21 | 273 | 2 | 252 | 1.26e-73 | 226 |
| Msa0979530 | AT3G29250.3 | 47.826 | 253 | 130 | 2 | 21 | 273 | 38 | 288 | 2.55e-73 | 226 |
| Msa0979530 | AT2G47120.1 | 46.124 | 258 | 125 | 5 | 21 | 273 | 2 | 250 | 5.92e-72 | 222 |
| Msa0979530 | AT2G47130.1 | 47.656 | 256 | 125 | 4 | 21 | 273 | 2 | 251 | 1.10e-71 | 221 |
| Msa0979530 | AT3G29250.1 | 47.451 | 255 | 130 | 3 | 21 | 273 | 38 | 290 | 3.03e-71 | 221 |
| Msa0979530 | AT2G47120.2 | 45.882 | 255 | 124 | 5 | 24 | 273 | 6 | 251 | 7.43e-71 | 219 |
| Msa0979530 | AT3G26770.1 | 44.574 | 258 | 134 | 5 | 22 | 273 | 38 | 292 | 1.67e-66 | 209 |
| Msa0979530 | AT3G26760.1 | 39.636 | 275 | 155 | 5 | 7 | 273 | 18 | 289 | 5.90e-61 | 195 |
| Msa0979530 | AT4G03140.1 | 41.176 | 255 | 142 | 4 | 24 | 273 | 77 | 328 | 8.81e-60 | 193 |
| Msa0979530 | AT3G51680.1 | 40.288 | 278 | 150 | 5 | 10 | 272 | 17 | 293 | 1.01e-56 | 184 |
| Msa0979530 | AT1G52340.1 | 42.529 | 261 | 136 | 5 | 24 | 273 | 17 | 274 | 2.24e-56 | 183 |
| Msa0979530 | AT3G42960.1 | 42.586 | 263 | 137 | 7 | 20 | 273 | 3 | 260 | 6.80e-52 | 171 |
| Msa0979530 | AT2G47150.1 | 33.858 | 254 | 103 | 8 | 25 | 273 | 1 | 194 | 6.48e-30 | 112 |
| Msa0979530 | AT1G54870.1 | 32.824 | 262 | 159 | 8 | 22 | 274 | 79 | 332 | 2.63e-28 | 111 |
| Msa0979530 | AT1G54870.2 | 32.824 | 262 | 159 | 8 | 22 | 274 | 81 | 334 | 2.77e-28 | 111 |
| Msa0979530 | AT3G05260.1 | 30.303 | 264 | 166 | 8 | 20 | 274 | 32 | 286 | 4.79e-25 | 101 |
| Msa0979530 | AT5G18210.1 | 30.651 | 261 | 162 | 7 | 25 | 274 | 8 | 260 | 7.72e-25 | 100 |
| Msa0979530 | AT4G13180.1 | 30.000 | 270 | 159 | 10 | 20 | 274 | 8 | 262 | 9.99e-23 | 94.7 |
| Msa0979530 | AT4G05530.1 | 31.395 | 258 | 168 | 5 | 17 | 273 | 1 | 250 | 3.56e-22 | 93.2 |
| Msa0979530 | AT5G18210.2 | 30.769 | 260 | 148 | 8 | 25 | 273 | 8 | 246 | 1.76e-21 | 91.7 |
| Msa0979530 | AT3G03980.1 | 28.996 | 269 | 170 | 6 | 20 | 274 | 9 | 270 | 9.04e-21 | 89.4 |
| Msa0979530 | AT3G04000.1 | 28.571 | 280 | 169 | 8 | 13 | 272 | 1 | 269 | 8.78e-20 | 87.0 |
| Msa0979530 | AT2G29340.2 | 29.779 | 272 | 155 | 10 | 17 | 273 | 1 | 251 | 1.13e-19 | 86.3 |
| Msa0979530 | AT1G24360.1 | 27.626 | 257 | 167 | 8 | 24 | 273 | 73 | 317 | 1.37e-19 | 87.0 |
| Msa0979530 | AT2G29340.1 | 29.924 | 264 | 151 | 9 | 25 | 273 | 7 | 251 | 1.53e-19 | 86.7 |
| Msa0979530 | AT2G29310.1 | 30.258 | 271 | 141 | 10 | 25 | 273 | 7 | 251 | 5.66e-19 | 84.3 |
| Msa0979530 | AT5G06060.1 | 28.044 | 271 | 163 | 8 | 17 | 273 | 1 | 253 | 1.02e-17 | 80.9 |
| Msa0979530 | AT1G63380.3 | 26.953 | 256 | 175 | 7 | 25 | 272 | 15 | 266 | 1.35e-17 | 80.9 |
| Msa0979530 | AT2G29350.1 | 29.588 | 267 | 157 | 10 | 19 | 272 | 9 | 257 | 1.49e-17 | 80.5 |
| Msa0979530 | AT1G63380.2 | 26.953 | 256 | 175 | 7 | 25 | 272 | 22 | 273 | 1.59e-17 | 80.9 |
| Msa0979530 | AT1G63380.1 | 26.953 | 256 | 175 | 7 | 25 | 272 | 17 | 268 | 1.64e-17 | 80.9 |
| Msa0979530 | AT1G63380.4 | 26.953 | 256 | 175 | 7 | 25 | 272 | 19 | 270 | 1.65e-17 | 80.9 |
| Msa0979530 | AT2G30670.1 | 26.718 | 262 | 162 | 8 | 25 | 273 | 7 | 251 | 2.86e-17 | 79.7 |
| Msa0979530 | AT2G29330.1 | 27.652 | 264 | 157 | 8 | 25 | 273 | 7 | 251 | 3.94e-17 | 79.3 |
| Msa0979530 | AT1G62610.4 | 26.562 | 256 | 176 | 7 | 25 | 272 | 19 | 270 | 4.82e-17 | 79.3 |
| Msa0979530 | AT1G62610.2 | 26.562 | 256 | 176 | 7 | 25 | 272 | 13 | 264 | 4.82e-17 | 79.3 |
| Msa0979530 | AT1G62610.1 | 26.562 | 256 | 176 | 7 | 25 | 272 | 14 | 265 | 5.09e-17 | 79.3 |
| Msa0979530 | AT1G62610.3 | 26.562 | 256 | 176 | 7 | 25 | 272 | 15 | 266 | 5.10e-17 | 79.3 |
| Msa0979530 | AT2G29370.1 | 27.536 | 276 | 162 | 10 | 15 | 273 | 6 | 260 | 6.45e-17 | 79.0 |
| Msa0979530 | AT2G29360.1 | 29.818 | 275 | 157 | 11 | 15 | 273 | 6 | 260 | 8.88e-17 | 78.6 |
| Msa0979530 | AT3G46170.1 | 25.287 | 261 | 174 | 8 | 24 | 272 | 25 | 276 | 2.70e-15 | 74.7 |
| Msa0979530 | AT2G29290.2 | 28.571 | 266 | 152 | 9 | 25 | 273 | 7 | 251 | 5.02e-15 | 73.6 |
| Msa0979530 | AT2G29260.1 | 26.820 | 261 | 179 | 7 | 16 | 272 | 59 | 311 | 5.37e-15 | 74.3 |
| Msa0979530 | AT3G55290.2 | 25.385 | 260 | 173 | 7 | 25 | 272 | 17 | 267 | 5.62e-15 | 73.6 |
| Msa0979530 | AT3G55290.1 | 25.385 | 260 | 173 | 7 | 25 | 272 | 18 | 268 | 6.03e-15 | 73.6 |
| Msa0979530 | AT2G29300.2 | 28.938 | 273 | 147 | 13 | 25 | 275 | 7 | 254 | 2.31e-14 | 72.0 |
| Msa0979530 | AT2G29300.1 | 29.091 | 275 | 147 | 13 | 25 | 276 | 7 | 256 | 5.53e-14 | 70.5 |
| Msa0979530 | AT2G29310.2 | 29.148 | 223 | 122 | 8 | 62 | 273 | 52 | 249 | 6.95e-14 | 70.1 |
| Msa0979530 | AT2G29340.3 | 28.641 | 206 | 118 | 7 | 25 | 216 | 7 | 197 | 1.14e-13 | 68.6 |
| Msa0979530 | AT2G29340.4 | 28.641 | 206 | 118 | 7 | 25 | 216 | 7 | 197 | 1.14e-13 | 68.6 |
| Msa0979530 | AT1G07440.1 | 26.336 | 262 | 174 | 7 | 19 | 273 | 6 | 255 | 1.16e-13 | 69.7 |
| Msa0979530 | AT3G55310.1 | 25.095 | 263 | 172 | 8 | 24 | 272 | 16 | 267 | 2.30e-13 | 68.9 |
| Msa0979530 | AT3G47350.1 | 23.247 | 271 | 183 | 8 | 3 | 257 | 22 | 283 | 5.62e-13 | 68.2 |
| Msa0979530 | AT3G47360.1 | 25.455 | 220 | 151 | 6 | 3 | 216 | 22 | 234 | 8.54e-13 | 67.8 |
| Msa0979530 | AT2G29350.2 | 29.524 | 210 | 121 | 8 | 20 | 216 | 10 | 205 | 9.75e-13 | 66.6 |
| Msa0979530 | AT2G29310.3 | 29.858 | 211 | 109 | 8 | 25 | 216 | 7 | 197 | 2.43e-12 | 65.1 |
| Msa0979530 | AT3G47350.2 | 23.744 | 219 | 155 | 5 | 3 | 216 | 22 | 233 | 5.49e-12 | 65.5 |
| Msa0979530 | AT5G50770.1 | 29.648 | 199 | 131 | 6 | 14 | 208 | 33 | 226 | 8.49e-12 | 65.1 |
| Msa0979530 | AT5G50590.2 | 28.571 | 182 | 115 | 6 | 22 | 196 | 42 | 215 | 1.12e-11 | 63.9 |
| Msa0979530 | AT5G50690.2 | 28.571 | 182 | 115 | 6 | 22 | 196 | 42 | 215 | 1.12e-11 | 63.9 |
| Msa0979530 | AT2G29350.3 | 28.436 | 211 | 130 | 7 | 65 | 272 | 27 | 219 | 1.88e-11 | 62.8 |
Find 72 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCGACGGTGGATTTGTTTA+TGG | 0.161997 | 6_4:-16772302 | Msa0979530:CDS |
| TAATCTTAGACTAGAGTTTC+TGG | 0.222230 | 6_4:+16773178 | None:intergenic |
| CAATGGTGGAGGGGCGCGTT+AGG | 0.251861 | 6_4:-16772658 | Msa0979530:CDS |
| CAGTCAACGGTTAATACTTA+TGG | 0.257506 | 6_4:-16772948 | Msa0979530:CDS |
| GTTGTGCACTAAACTATATT+TGG | 0.261324 | 6_4:-16773225 | Msa0979530:CDS |
| GTCATAGCTTCTGCCATGTT+TGG | 0.290440 | 6_4:+16773200 | None:intergenic |
| ATGTCAAAGCACGCAGTATT+GGG | 0.309736 | 6_4:-16772569 | Msa0979530:CDS |
| AACTCTAGTCTAAGATTATC+AGG | 0.316109 | 6_4:-16773173 | Msa0979530:CDS |
| GCGTGCAGCCAGCGTGCAAC+TGG | 0.336790 | 6_4:-16772540 | Msa0979530:CDS |
| AATGGTGGAGGGGCGCGTTA+GGG | 0.343850 | 6_4:-16772657 | Msa0979530:CDS |
| ATGGTGGAGGGGCGCGTTAG+GGG | 0.370385 | 6_4:-16772656 | Msa0979530:CDS |
| ATCGGTTGGACTAAAGATTC+CGG | 0.377217 | 6_4:+16772775 | None:intergenic |
| GATGTCAAAGCACGCAGTAT+TGG | 0.423772 | 6_4:-16772570 | Msa0979530:CDS |
| CTTGAATGCCAAGTTCATCT+TGG | 0.426148 | 6_4:+16773051 | None:intergenic |
| AGTGGATGTAGGTGCACCTT+TGG | 0.435399 | 6_4:+16773009 | None:intergenic |
| GAACATTGATTGTGAATAAA+CGG | 0.441133 | 6_4:+16772717 | None:intergenic |
| CGCGCCCCTCCACCATTGCA+CGG | 0.441858 | 6_4:+16772663 | None:intergenic |
| TGGTGGAGGGGCGCGTTAGG+GGG | 0.443091 | 6_4:-16772655 | Msa0979530:CDS |
| TGGACTAAAGATTCCGGCAT+TGG | 0.443211 | 6_4:+16772781 | None:intergenic |
| AAAGGATATGCAAGACTTGA+AGG | 0.443745 | 6_4:-16772413 | Msa0979530:CDS |
| TGCAGCCCGTGCAATGGTGG+AGG | 0.459063 | 6_4:-16772669 | Msa0979530:CDS |
| AAGGCACAAGAGACTTATAA+AGG | 0.461345 | 6_4:-16772431 | Msa0979530:CDS |
| TCCAACACAGTTTGATCGGT+TGG | 0.467057 | 6_4:+16772761 | None:intergenic |
| ACAGCATCTGCCACATGCTT+AGG | 0.471667 | 6_4:+16772377 | None:intergenic |
| TTATTCACAATCAATGTTCG+AGG | 0.474144 | 6_4:-16772713 | Msa0979530:CDS |
| GATATAATGTTCACCAATGC+CGG | 0.479834 | 6_4:-16772794 | Msa0979530:CDS |
| GTGTGCACGGGGAGTGTTCA+CGG | 0.484890 | 6_4:-16772626 | Msa0979530:CDS |
| TGATTGTGAATAAACGGTCT+AGG | 0.499386 | 6_4:+16772723 | None:intergenic |
| AAAGGTGTCGCGAGTCCATT+CGG | 0.500418 | 6_4:+16772485 | None:intergenic |
| ACTAGCACCACCCGTGATGA+TGG | 0.502192 | 6_4:+16773142 | None:intergenic |
| CACAATCAATGTTCGAGGAA+TGG | 0.504145 | 6_4:-16772708 | Msa0979530:CDS |
| ACGGGTGGTGCTAGTGGCAT+CGG | 0.517674 | 6_4:-16773134 | Msa0979530:CDS |
| GCAGCCCGTGCAATGGTGGA+GGG | 0.522760 | 6_4:-16772668 | Msa0979530:CDS |
| GGCAAAATAGCCATCATCAC+GGG | 0.526330 | 6_4:-16773152 | Msa0979530:CDS |
| CACCGTCGACACTAAGATCA+AGG | 0.530151 | 6_4:+16772315 | None:intergenic |
| AATGATGCTGAGTTTGTCAC+TGG | 0.531303 | 6_4:-16772338 | Msa0979530:CDS |
| TTTAGGGGTGAGTGAGGAGA+AGG | 0.535551 | 6_4:-16772450 | Msa0979530:CDS |
| GCGCCCCTCCACCATTGCAC+GGG | 0.541845 | 6_4:+16772664 | None:intergenic |
| GAGTTCCAACACAGTTTGAT+CGG | 0.542405 | 6_4:+16772757 | None:intergenic |
| AACGGTTAATACTTATGGAC+AGG | 0.544859 | 6_4:-16772943 | Msa0979530:intron |
| GGGAGTGTTCACGGTAGTCA+TGG | 0.546162 | 6_4:-16772617 | Msa0979530:CDS |
| GCTGACATCCAAGATGAACT+TGG | 0.551641 | 6_4:-16773059 | Msa0979530:CDS |
| ATCATCACGGGTGGTGCTAG+TGG | 0.552992 | 6_4:-16773140 | Msa0979530:CDS |
| GGCCTTGATCTTAGTGTCGA+CGG | 0.553227 | 6_4:-16772317 | Msa0979530:CDS |
| TGTGAATAAACGGTCTAGGT+TGG | 0.553958 | 6_4:+16772727 | None:intergenic |
| GTGAACTGTGTCTCGCCGAA+TGG | 0.562393 | 6_4:-16772500 | Msa0979530:CDS |
| AGCGTGCAACTGGCCGCACA+CGG | 0.572901 | 6_4:-16772530 | Msa0979530:CDS |
| TAGTGGCATCGGTGAAGCCA+CGG | 0.573146 | 6_4:-16773123 | Msa0979530:CDS |
| CAGCCCGTGCAATGGTGGAG+GGG | 0.580685 | 6_4:-16772667 | Msa0979530:CDS |
| GTCTTTGCTAACGAAGGCGT+CGG | 0.585405 | 6_4:-16773095 | Msa0979530:CDS |
| TCCAACCGATCAAACTGTGT+TGG | 0.590298 | 6_4:-16772762 | Msa0979530:CDS |
| ACATGCAGCCCGTGCAATGG+TGG | 0.591192 | 6_4:-16772672 | Msa0979530:CDS |
| TCATGGATTCTTGAGGTCAA+CGG | 0.591437 | 6_4:-16772600 | Msa0979530:CDS |
| ATTCAAGTAGCTGCGTCCAT+CGG | 0.592404 | 6_4:-16773035 | Msa0979530:CDS |
| GGTGCACCTTTGGTTGCCGA+TGG | 0.593029 | 6_4:+16773019 | None:intergenic |
| TGTCAAAGCACGCAGTATTG+GGG | 0.601212 | 6_4:-16772568 | Msa0979530:CDS |
| CTGCGTCCATCGGCAACCAA+AGG | 0.606542 | 6_4:-16773025 | Msa0979530:CDS |
| ACTATATTTGGATCCAAACA+TGG | 0.620968 | 6_4:-16773213 | Msa0979530:CDS |
| GTTCACTCTTATTCCGTGTG+CGG | 0.626381 | 6_4:+16772517 | None:intergenic |
| GAAACATGCAGCCCGTGCAA+TGG | 0.638047 | 6_4:-16772675 | Msa0979530:CDS |
| AGGCAAAATAGCCATCATCA+CGG | 0.640770 | 6_4:-16773153 | Msa0979530:CDS |
| GGATGTCAGCAATCACAACA+TGG | 0.642460 | 6_4:+16773072 | None:intergenic |
| TGCCACATCACAGTGGATGT+AGG | 0.644985 | 6_4:+16772998 | None:intergenic |
| CACCTACATCCACTGTGATG+TGG | 0.646592 | 6_4:-16773000 | Msa0979530:CDS |
| GCGCGTGTCTTTGCTAACGA+AGG | 0.654619 | 6_4:-16773101 | Msa0979530:CDS |
| ATATGCAAGACTTGAAGGAG+TGG | 0.664008 | 6_4:-16772408 | Msa0979530:CDS |
| CTTGATCTTAGTGTCGACGG+TGG | 0.664645 | 6_4:-16772314 | Msa0979530:CDS |
| ACGGTAGTCATGGATTCTTG+AGG | 0.671995 | 6_4:-16772607 | Msa0979530:CDS |
| GGTGCTCACACCTAAGCATG+TGG | 0.673012 | 6_4:-16772387 | Msa0979530:CDS |
| AAAATAGCCATCATCACGGG+TGG | 0.677019 | 6_4:-16773149 | Msa0979530:CDS |
| CTTCGTCTGCCACATCACAG+TGG | 0.713218 | 6_4:+16772991 | None:intergenic |
| GTTAGCAAAGACACGCGCCG+TGG | 0.733448 | 6_4:+16773106 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATTTCAATGTTTAAA+AGG | - | chr6_4:16773217-16773236 | Msa0979530:CDS | 10.0% |
| !!! | TTTTAATTTCAATGTTTAAA+AGG | - | chr6_4:16773217-16773236 | Msa0979530:CDS | 10.0% |
| !!! | CTTTGACTTGTAAATTTTTA+GGG | - | chr6_4:16772934-16772953 | Msa0979530:intron | 20.0% |
| !!! | TTTGACTTGTAAATTTTTAG+GGG | - | chr6_4:16772935-16772954 | Msa0979530:intron | 20.0% |
| !!! | CTTTGACTTGTAAATTTTTA+GGG | - | chr6_4:16772934-16772953 | Msa0979530:intron | 20.0% |
| !!! | TTTGACTTGTAAATTTTTAG+GGG | - | chr6_4:16772935-16772954 | Msa0979530:intron | 20.0% |
| !! | GAACATTGATTGTGAATAAA+CGG | + | chr6_4:16772686-16772705 | None:intergenic | 25.0% |
| ! | CCTAAAAATTTACAAGTCAA+AGG | + | chr6_4:16772936-16772955 | None:intergenic | 25.0% |
| !!! | CCTTTGACTTGTAAATTTTT+AGG | - | chr6_4:16772933-16772952 | Msa0979530:intron | 25.0% |
| ! | TATGCAACAAAAAAAAACGA+AGG | - | chr6_4:16773133-16773152 | Msa0979530:CDS | 25.0% |
| !! | GAACATTGATTGTGAATAAA+CGG | + | chr6_4:16772686-16772705 | None:intergenic | 25.0% |
| ! | CCTAAAAATTTACAAGTCAA+AGG | + | chr6_4:16772936-16772955 | None:intergenic | 25.0% |
| !!! | CCTTTGACTTGTAAATTTTT+AGG | - | chr6_4:16772933-16772952 | Msa0979530:intron | 25.0% |
| ! | TATGCAACAAAAAAAAACGA+AGG | - | chr6_4:16773133-16773152 | Msa0979530:CDS | 25.0% |
| GTTGTGCACTAAACTATATT+TGG | - | chr6_4:16772175-16772194 | Msa0979530:three_prime_UTR | 30.0% | |
| ACTATATTTGGATCCAAACA+TGG | - | chr6_4:16772187-16772206 | Msa0979530:three_prime_UTR | 30.0% | |
| TAATCTTAGACTAGAGTTTC+TGG | + | chr6_4:16772225-16772244 | None:intergenic | 30.0% | |
| ! | AACTCTAGTCTAAGATTATC+AGG | - | chr6_4:16772227-16772246 | Msa0979530:three_prime_UTR | 30.0% |
| ! | ATTTCCTATCTTAGCTTTCA+AGG | - | chr6_4:16772487-16772506 | Msa0979530:CDS | 30.0% |
| ! | TTTCCTATCTTAGCTTTCAA+GGG | - | chr6_4:16772488-16772507 | Msa0979530:CDS | 30.0% |
| TTATTCACAATCAATGTTCG+AGG | - | chr6_4:16772687-16772706 | Msa0979530:CDS | 30.0% | |
| GTTGTGCACTAAACTATATT+TGG | - | chr6_4:16772175-16772194 | Msa0979530:three_prime_UTR | 30.0% | |
| ACTATATTTGGATCCAAACA+TGG | - | chr6_4:16772187-16772206 | Msa0979530:three_prime_UTR | 30.0% | |
| TAATCTTAGACTAGAGTTTC+TGG | + | chr6_4:16772225-16772244 | None:intergenic | 30.0% | |
| ! | AACTCTAGTCTAAGATTATC+AGG | - | chr6_4:16772227-16772246 | Msa0979530:three_prime_UTR | 30.0% |
| ! | ATTTCCTATCTTAGCTTTCA+AGG | - | chr6_4:16772487-16772506 | Msa0979530:CDS | 30.0% |
| ! | TTTCCTATCTTAGCTTTCAA+GGG | - | chr6_4:16772488-16772507 | Msa0979530:CDS | 30.0% |
| TTATTCACAATCAATGTTCG+AGG | - | chr6_4:16772687-16772706 | Msa0979530:CDS | 30.0% | |
| CAAAAATCTCGTTCAGTCAA+CGG | - | chr6_4:16772439-16772458 | Msa0979530:CDS | 35.0% | |
| CAGTCAACGGTTAATACTTA+TGG | - | chr6_4:16772452-16772471 | Msa0979530:CDS | 35.0% | |
| AACGGTTAATACTTATGGAC+AGG | - | chr6_4:16772457-16772476 | Msa0979530:CDS | 35.0% | |
| GATTATGTTATTCTCACACC+AGG | - | chr6_4:16772581-16772600 | Msa0979530:CDS | 35.0% | |
| TGGTGAACATTATATCTACC+TGG | + | chr6_4:16772602-16772621 | None:intergenic | 35.0% | |
| GATATAATGTTCACCAATGC+CGG | - | chr6_4:16772606-16772625 | Msa0979530:CDS | 35.0% | |
| TGATTGTGAATAAACGGTCT+AGG | + | chr6_4:16772680-16772699 | None:intergenic | 35.0% | |
| !! | TAAATTTTTAGGGGTGAGTG+AGG | - | chr6_4:16772944-16772963 | Msa0979530:CDS | 35.0% |
| AAGGCACAAGAGACTTATAA+AGG | - | chr6_4:16772969-16772988 | Msa0979530:CDS | 35.0% | |
| AAAGGATATGCAAGACTTGA+AGG | - | chr6_4:16772987-16773006 | Msa0979530:CDS | 35.0% | |
| CAAAAATCTCGTTCAGTCAA+CGG | - | chr6_4:16772439-16772458 | Msa0979530:CDS | 35.0% | |
| CAGTCAACGGTTAATACTTA+TGG | - | chr6_4:16772452-16772471 | Msa0979530:CDS | 35.0% | |
| AACGGTTAATACTTATGGAC+AGG | - | chr6_4:16772457-16772476 | Msa0979530:CDS | 35.0% | |
| GATTATGTTATTCTCACACC+AGG | - | chr6_4:16772581-16772600 | Msa0979530:CDS | 35.0% | |
| TGGTGAACATTATATCTACC+TGG | + | chr6_4:16772602-16772621 | None:intergenic | 35.0% | |
| GATATAATGTTCACCAATGC+CGG | - | chr6_4:16772606-16772625 | Msa0979530:CDS | 35.0% | |
| TGATTGTGAATAAACGGTCT+AGG | + | chr6_4:16772680-16772699 | None:intergenic | 35.0% | |
| !! | TAAATTTTTAGGGGTGAGTG+AGG | - | chr6_4:16772944-16772963 | Msa0979530:CDS | 35.0% |
| AAGGCACAAGAGACTTATAA+AGG | - | chr6_4:16772969-16772988 | Msa0979530:CDS | 35.0% | |
| AAAGGATATGCAAGACTTGA+AGG | - | chr6_4:16772987-16773006 | Msa0979530:CDS | 35.0% | |
| AGGCAAAATAGCCATCATCA+CGG | - | chr6_4:16772247-16772266 | Msa0979530:three_prime_UTR | 40.0% | |
| CTTGAATGCCAAGTTCATCT+TGG | + | chr6_4:16772352-16772371 | None:intergenic | 40.0% | |
| ACACCCTTGAAAGCTAAGAT+AGG | + | chr6_4:16772494-16772513 | None:intergenic | 40.0% | |
| ATCGGTTGGACTAAAGATTC+CGG | + | chr6_4:16772628-16772647 | None:intergenic | 40.0% | |
| GAGTTCCAACACAGTTTGAT+CGG | + | chr6_4:16772646-16772665 | None:intergenic | 40.0% | |
| TGTGAATAAACGGTCTAGGT+TGG | + | chr6_4:16772676-16772695 | None:intergenic | 40.0% | |
| CACAATCAATGTTCGAGGAA+TGG | - | chr6_4:16772692-16772711 | Msa0979530:CDS | 40.0% | |
| TCATGGATTCTTGAGGTCAA+CGG | - | chr6_4:16772800-16772819 | Msa0979530:CDS | 40.0% | |
| ATGTCAAAGCACGCAGTATT+GGG | - | chr6_4:16772831-16772850 | Msa0979530:intron | 40.0% | |
| ATATGCAAGACTTGAAGGAG+TGG | - | chr6_4:16772992-16773011 | Msa0979530:CDS | 40.0% | |
| AATGATGCTGAGTTTGTCAC+TGG | - | chr6_4:16773062-16773081 | Msa0979530:CDS | 40.0% | |
| AGGCAAAATAGCCATCATCA+CGG | - | chr6_4:16772247-16772266 | Msa0979530:three_prime_UTR | 40.0% | |
| CTTGAATGCCAAGTTCATCT+TGG | + | chr6_4:16772352-16772371 | None:intergenic | 40.0% | |
| ACACCCTTGAAAGCTAAGAT+AGG | + | chr6_4:16772494-16772513 | None:intergenic | 40.0% | |
| ATCGGTTGGACTAAAGATTC+CGG | + | chr6_4:16772628-16772647 | None:intergenic | 40.0% | |
| GAGTTCCAACACAGTTTGAT+CGG | + | chr6_4:16772646-16772665 | None:intergenic | 40.0% | |
| TGTGAATAAACGGTCTAGGT+TGG | + | chr6_4:16772676-16772695 | None:intergenic | 40.0% | |
| CACAATCAATGTTCGAGGAA+TGG | - | chr6_4:16772692-16772711 | Msa0979530:CDS | 40.0% | |
| TCATGGATTCTTGAGGTCAA+CGG | - | chr6_4:16772800-16772819 | Msa0979530:CDS | 40.0% | |
| ATGTCAAAGCACGCAGTATT+GGG | - | chr6_4:16772831-16772850 | Msa0979530:intron | 40.0% | |
| ATATGCAAGACTTGAAGGAG+TGG | - | chr6_4:16772992-16773011 | Msa0979530:CDS | 40.0% | |
| AATGATGCTGAGTTTGTCAC+TGG | - | chr6_4:16773062-16773081 | Msa0979530:CDS | 40.0% | |
| GTCATAGCTTCTGCCATGTT+TGG | + | chr6_4:16772203-16772222 | None:intergenic | 45.0% | |
| GGCAAAATAGCCATCATCAC+GGG | - | chr6_4:16772248-16772267 | Msa0979530:three_prime_UTR | 45.0% | |
| AAAATAGCCATCATCACGGG+TGG | - | chr6_4:16772251-16772270 | Msa0979530:three_prime_UTR | 45.0% | |
| GGATGTCAGCAATCACAACA+TGG | + | chr6_4:16772331-16772350 | None:intergenic | 45.0% | |
| GCTGACATCCAAGATGAACT+TGG | - | chr6_4:16772341-16772360 | Msa0979530:CDS | 45.0% | |
| ATTCAAGTAGCTGCGTCCAT+CGG | - | chr6_4:16772365-16772384 | Msa0979530:CDS | 45.0% | |
| TGGACTAAAGATTCCGGCAT+TGG | + | chr6_4:16772622-16772641 | None:intergenic | 45.0% | |
| TCCAACCGATCAAACTGTGT+TGG | - | chr6_4:16772638-16772657 | Msa0979530:CDS | 45.0% | |
| TCCAACACAGTTTGATCGGT+TGG | + | chr6_4:16772642-16772661 | None:intergenic | 45.0% | |
| ACGGTAGTCATGGATTCTTG+AGG | - | chr6_4:16772793-16772812 | Msa0979530:CDS | 45.0% | |
| GATGTCAAAGCACGCAGTAT+TGG | - | chr6_4:16772830-16772849 | Msa0979530:intron | 45.0% | |
| TGTCAAAGCACGCAGTATTG+GGG | - | chr6_4:16772832-16772851 | Msa0979530:intron | 45.0% | |
| GTTCACTCTTATTCCGTGTG+CGG | + | chr6_4:16772886-16772905 | None:intergenic | 45.0% | |
| ! | GTCGACGGTGGATTTGTTTA+TGG | - | chr6_4:16773098-16773117 | Msa0979530:CDS | 45.0% |
| GTCATAGCTTCTGCCATGTT+TGG | + | chr6_4:16772203-16772222 | None:intergenic | 45.0% | |
| GGCAAAATAGCCATCATCAC+GGG | - | chr6_4:16772248-16772267 | Msa0979530:three_prime_UTR | 45.0% | |
| AAAATAGCCATCATCACGGG+TGG | - | chr6_4:16772251-16772270 | Msa0979530:three_prime_UTR | 45.0% | |
| GGATGTCAGCAATCACAACA+TGG | + | chr6_4:16772331-16772350 | None:intergenic | 45.0% | |
| GCTGACATCCAAGATGAACT+TGG | - | chr6_4:16772341-16772360 | Msa0979530:CDS | 45.0% | |
| ATTCAAGTAGCTGCGTCCAT+CGG | - | chr6_4:16772365-16772384 | Msa0979530:CDS | 45.0% | |
| TGGACTAAAGATTCCGGCAT+TGG | + | chr6_4:16772622-16772641 | None:intergenic | 45.0% | |
| TCCAACCGATCAAACTGTGT+TGG | - | chr6_4:16772638-16772657 | Msa0979530:CDS | 45.0% | |
| TCCAACACAGTTTGATCGGT+TGG | + | chr6_4:16772642-16772661 | None:intergenic | 45.0% | |
| ACGGTAGTCATGGATTCTTG+AGG | - | chr6_4:16772793-16772812 | Msa0979530:CDS | 45.0% | |
| GATGTCAAAGCACGCAGTAT+TGG | - | chr6_4:16772830-16772849 | Msa0979530:intron | 45.0% | |
| TGTCAAAGCACGCAGTATTG+GGG | - | chr6_4:16772832-16772851 | Msa0979530:intron | 45.0% | |
| GTTCACTCTTATTCCGTGTG+CGG | + | chr6_4:16772886-16772905 | None:intergenic | 45.0% | |
| ! | GTCGACGGTGGATTTGTTTA+TGG | - | chr6_4:16773098-16773117 | Msa0979530:CDS | 45.0% |
| ! | GTCTTTGCTAACGAAGGCGT+CGG | - | chr6_4:16772305-16772324 | Msa0979530:CDS | 50.0% |
| AGTGGATGTAGGTGCACCTT+TGG | + | chr6_4:16772394-16772413 | None:intergenic | 50.0% | |
| CACCTACATCCACTGTGATG+TGG | - | chr6_4:16772400-16772419 | Msa0979530:CDS | 50.0% | |
| TGCCACATCACAGTGGATGT+AGG | + | chr6_4:16772405-16772424 | None:intergenic | 50.0% | |
| !! | TAGGGGGAGTATTGTGTGCA+CGG | - | chr6_4:16772761-16772780 | Msa0979530:CDS | 50.0% |
| !! | AAAGGTGTCGCGAGTCCATT+CGG | + | chr6_4:16772918-16772937 | None:intergenic | 50.0% |
| TTTAGGGGTGAGTGAGGAGA+AGG | - | chr6_4:16772950-16772969 | Msa0979530:CDS | 50.0% | |
| ACAGCATCTGCCACATGCTT+AGG | + | chr6_4:16773026-16773045 | None:intergenic | 50.0% | |
| ! | GGCCTTGATCTTAGTGTCGA+CGG | - | chr6_4:16773083-16773102 | Msa0979530:CDS | 50.0% |
| CACCGTCGACACTAAGATCA+AGG | + | chr6_4:16773088-16773107 | None:intergenic | 50.0% | |
| !! | CTTGATCTTAGTGTCGACGG+TGG | - | chr6_4:16773086-16773105 | Msa0979530:CDS | 50.0% |
| ! | GTCTTTGCTAACGAAGGCGT+CGG | - | chr6_4:16772305-16772324 | Msa0979530:CDS | 50.0% |
| AGTGGATGTAGGTGCACCTT+TGG | + | chr6_4:16772394-16772413 | None:intergenic | 50.0% | |
| CACCTACATCCACTGTGATG+TGG | - | chr6_4:16772400-16772419 | Msa0979530:CDS | 50.0% | |
| TGCCACATCACAGTGGATGT+AGG | + | chr6_4:16772405-16772424 | None:intergenic | 50.0% | |
| !! | TAGGGGGAGTATTGTGTGCA+CGG | - | chr6_4:16772761-16772780 | Msa0979530:CDS | 50.0% |
| !! | AAAGGTGTCGCGAGTCCATT+CGG | + | chr6_4:16772918-16772937 | None:intergenic | 50.0% |
| TTTAGGGGTGAGTGAGGAGA+AGG | - | chr6_4:16772950-16772969 | Msa0979530:CDS | 50.0% | |
| ACAGCATCTGCCACATGCTT+AGG | + | chr6_4:16773026-16773045 | None:intergenic | 50.0% | |
| ! | GGCCTTGATCTTAGTGTCGA+CGG | - | chr6_4:16773083-16773102 | Msa0979530:CDS | 50.0% |
| CACCGTCGACACTAAGATCA+AGG | + | chr6_4:16773088-16773107 | None:intergenic | 50.0% | |
| !! | CTTGATCTTAGTGTCGACGG+TGG | - | chr6_4:16773086-16773105 | Msa0979530:CDS | 50.0% |
| ACTAGCACCACCCGTGATGA+TGG | + | chr6_4:16772261-16772280 | None:intergenic | 55.0% | |
| ! | ATCATCACGGGTGGTGCTAG+TGG | - | chr6_4:16772260-16772279 | Msa0979530:three_prime_UTR | 55.0% |
| !! | TAGTGGCATCGGTGAAGCCA+CGG | - | chr6_4:16772277-16772296 | Msa0979530:exon | 55.0% |
| GCGCGTGTCTTTGCTAACGA+AGG | - | chr6_4:16772299-16772318 | Msa0979530:CDS | 55.0% | |
| CTTCGTCTGCCACATCACAG+TGG | + | chr6_4:16772412-16772431 | None:intergenic | 55.0% | |
| GAAACATGCAGCCCGTGCAA+TGG | - | chr6_4:16772725-16772744 | Msa0979530:CDS | 55.0% | |
| !! | AGGGGGAGTATTGTGTGCAC+GGG | - | chr6_4:16772762-16772781 | Msa0979530:CDS | 55.0% |
| !! | GGGAGTGTTCACGGTAGTCA+TGG | - | chr6_4:16772783-16772802 | Msa0979530:CDS | 55.0% |
| GTGAACTGTGTCTCGCCGAA+TGG | - | chr6_4:16772900-16772919 | Msa0979530:intron | 55.0% | |
| GGTGCTCACACCTAAGCATG+TGG | - | chr6_4:16773013-16773032 | Msa0979530:CDS | 55.0% | |
| ACTAGCACCACCCGTGATGA+TGG | + | chr6_4:16772261-16772280 | None:intergenic | 55.0% | |
| ! | ATCATCACGGGTGGTGCTAG+TGG | - | chr6_4:16772260-16772279 | Msa0979530:three_prime_UTR | 55.0% |
| !! | TAGTGGCATCGGTGAAGCCA+CGG | - | chr6_4:16772277-16772296 | Msa0979530:exon | 55.0% |
| GCGCGTGTCTTTGCTAACGA+AGG | - | chr6_4:16772299-16772318 | Msa0979530:CDS | 55.0% | |
| CTTCGTCTGCCACATCACAG+TGG | + | chr6_4:16772412-16772431 | None:intergenic | 55.0% | |
| GAAACATGCAGCCCGTGCAA+TGG | - | chr6_4:16772725-16772744 | Msa0979530:CDS | 55.0% | |
| !! | AGGGGGAGTATTGTGTGCAC+GGG | - | chr6_4:16772762-16772781 | Msa0979530:CDS | 55.0% |
| !! | GGGAGTGTTCACGGTAGTCA+TGG | - | chr6_4:16772783-16772802 | Msa0979530:CDS | 55.0% |
| GTGAACTGTGTCTCGCCGAA+TGG | - | chr6_4:16772900-16772919 | Msa0979530:intron | 55.0% | |
| GGTGCTCACACCTAAGCATG+TGG | - | chr6_4:16773013-16773032 | Msa0979530:CDS | 55.0% | |
| ! | ACGGGTGGTGCTAGTGGCAT+CGG | - | chr6_4:16772266-16772285 | Msa0979530:three_prime_UTR | 60.0% |
| GTTAGCAAAGACACGCGCCG+TGG | + | chr6_4:16772297-16772316 | None:intergenic | 60.0% | |
| CTGCGTCCATCGGCAACCAA+AGG | - | chr6_4:16772375-16772394 | Msa0979530:CDS | 60.0% | |
| GGTGCACCTTTGGTTGCCGA+TGG | + | chr6_4:16772384-16772403 | None:intergenic | 60.0% | |
| ACATGCAGCCCGTGCAATGG+TGG | - | chr6_4:16772728-16772747 | Msa0979530:CDS | 60.0% | |
| ! | AATGGTGGAGGGGCGCGTTA+GGG | - | chr6_4:16772743-16772762 | Msa0979530:CDS | 60.0% |
| !! | GGGGGAGTATTGTGTGCACG+GGG | - | chr6_4:16772763-16772782 | Msa0979530:CDS | 60.0% |
| !! | GTGTGCACGGGGAGTGTTCA+CGG | - | chr6_4:16772774-16772793 | Msa0979530:CDS | 60.0% |
| ! | ACGGGTGGTGCTAGTGGCAT+CGG | - | chr6_4:16772266-16772285 | Msa0979530:three_prime_UTR | 60.0% |
| GTTAGCAAAGACACGCGCCG+TGG | + | chr6_4:16772297-16772316 | None:intergenic | 60.0% | |
| CTGCGTCCATCGGCAACCAA+AGG | - | chr6_4:16772375-16772394 | Msa0979530:CDS | 60.0% | |
| GGTGCACCTTTGGTTGCCGA+TGG | + | chr6_4:16772384-16772403 | None:intergenic | 60.0% | |
| ACATGCAGCCCGTGCAATGG+TGG | - | chr6_4:16772728-16772747 | Msa0979530:CDS | 60.0% | |
| ! | AATGGTGGAGGGGCGCGTTA+GGG | - | chr6_4:16772743-16772762 | Msa0979530:CDS | 60.0% |
| !! | GGGGGAGTATTGTGTGCACG+GGG | - | chr6_4:16772763-16772782 | Msa0979530:CDS | 60.0% |
| !! | GTGTGCACGGGGAGTGTTCA+CGG | - | chr6_4:16772774-16772793 | Msa0979530:CDS | 60.0% |
| TGCAGCCCGTGCAATGGTGG+AGG | - | chr6_4:16772731-16772750 | Msa0979530:CDS | 65.0% | |
| ! | GCAGCCCGTGCAATGGTGGA+GGG | - | chr6_4:16772732-16772751 | Msa0979530:CDS | 65.0% |
| ! | CAGCCCGTGCAATGGTGGAG+GGG | - | chr6_4:16772733-16772752 | Msa0979530:CDS | 65.0% |
| ! | CAATGGTGGAGGGGCGCGTT+AGG | - | chr6_4:16772742-16772761 | Msa0979530:CDS | 65.0% |
| ! | ATGGTGGAGGGGCGCGTTAG+GGG | - | chr6_4:16772744-16772763 | Msa0979530:CDS | 65.0% |
| AGCGTGCAACTGGCCGCACA+CGG | - | chr6_4:16772870-16772889 | Msa0979530:intron | 65.0% | |
| TGCAGCCCGTGCAATGGTGG+AGG | - | chr6_4:16772731-16772750 | Msa0979530:CDS | 65.0% | |
| ! | GCAGCCCGTGCAATGGTGGA+GGG | - | chr6_4:16772732-16772751 | Msa0979530:CDS | 65.0% |
| ! | CAGCCCGTGCAATGGTGGAG+GGG | - | chr6_4:16772733-16772752 | Msa0979530:CDS | 65.0% |
| ! | CAATGGTGGAGGGGCGCGTT+AGG | - | chr6_4:16772742-16772761 | Msa0979530:CDS | 65.0% |
| ! | ATGGTGGAGGGGCGCGTTAG+GGG | - | chr6_4:16772744-16772763 | Msa0979530:CDS | 65.0% |
| AGCGTGCAACTGGCCGCACA+CGG | - | chr6_4:16772870-16772889 | Msa0979530:intron | 65.0% | |
| GCGCCCCTCCACCATTGCAC+GGG | + | chr6_4:16772739-16772758 | None:intergenic | 70.0% | |
| CGCGCCCCTCCACCATTGCA+CGG | + | chr6_4:16772740-16772759 | None:intergenic | 70.0% | |
| ! | TGGTGGAGGGGCGCGTTAGG+GGG | - | chr6_4:16772745-16772764 | Msa0979530:CDS | 70.0% |
| GCGTGCAGCCAGCGTGCAAC+TGG | - | chr6_4:16772860-16772879 | Msa0979530:intron | 70.0% | |
| GTGTGCGGCCAGTTGCACGC+TGG | + | chr6_4:16772871-16772890 | None:intergenic | 70.0% | |
| GCGCCCCTCCACCATTGCAC+GGG | + | chr6_4:16772739-16772758 | None:intergenic | 70.0% | |
| CGCGCCCCTCCACCATTGCA+CGG | + | chr6_4:16772740-16772759 | None:intergenic | 70.0% | |
| ! | TGGTGGAGGGGCGCGTTAGG+GGG | - | chr6_4:16772745-16772764 | Msa0979530:CDS | 70.0% |
| GCGTGCAGCCAGCGTGCAAC+TGG | - | chr6_4:16772860-16772879 | Msa0979530:intron | 70.0% | |
| GTGTGCGGCCAGTTGCACGC+TGG | + | chr6_4:16772871-16772890 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 16772170 | 16773252 | 16772170 | ID=Msa0979530;Name=Msa0979530 |
| chr6_4 | mRNA | 16772170 | 16773252 | 16772170 | ID=Msa0979530-mRNA-1;Parent=Msa0979530;Name=Msa0979530-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|1|1|1|1|1|2|125|277 |
| chr6_4 | exon | 16772170 | 16772819 | 16772170 | ID=Msa0979530-mRNA-1:exon:5273;Parent=Msa0979530-mRNA-1 |
| chr6_4 | exon | 16772944 | 16773252 | 16772944 | ID=Msa0979530-mRNA-1:exon:5272;Parent=Msa0979530-mRNA-1 |
| chr6_4 | CDS | 16772944 | 16773252 | 16772944 | ID=Msa0979530-mRNA-1:cds;Parent=Msa0979530-mRNA-1 |
| chr6_4 | CDS | 16772295 | 16772819 | 16772295 | ID=Msa0979530-mRNA-1:cds;Parent=Msa0979530-mRNA-1 |
| chr6_4 | three_prime_UTR | 16772170 | 16772294 | 16772170 | ID=Msa0979530-mRNA-1:three_prime_utr;Parent=Msa0979530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
