Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421630 | sp|F4HW17|TMN5_ARATH | 52.105 | 570 | 262 | 5 | 74 | 633 | 21 | 589 | 0.0 | 615 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421630 | G7JIE2 | 91.171 | 589 | 44 | 1 | 53 | 633 | 1 | 589 | 0.0 | 1022 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa1421630 | -0.816827 | 4.524008e-52 | -8.615850e-47 |
| Msa0006480 | Msa1421630 | 0.806406 | 8.353194e-50 | -8.615850e-47 |
| Msa0007810 | Msa1421630 | -0.825660 | 4.153532e-54 | -8.615850e-47 |
| Msa0011060 | Msa1421630 | -0.803206 | 3.894113e-49 | -8.615850e-47 |
| Msa0011410 | Msa1421630 | -0.816757 | 4.691860e-52 | -8.615850e-47 |
| Msa0011440 | Msa1421630 | -0.828951 | 6.758023e-55 | -8.615850e-47 |
| Msa0013270 | Msa1421630 | 0.814630 | 1.397268e-51 | -8.615850e-47 |
| Msa0017300 | Msa1421630 | -0.805876 | 1.080120e-49 | -8.615850e-47 |
| Msa0025570 | Msa1421630 | 0.803208 | 3.890631e-49 | -8.615850e-47 |
| Msa0034700 | Msa1421630 | -0.827010 | 1.981109e-54 | -8.615850e-47 |
| Msa0044530 | Msa1421630 | -0.846739 | 1.797243e-59 | -8.615850e-47 |
| Msa0045810 | Msa1421630 | 0.829190 | 5.913603e-55 | -8.615850e-47 |
| Msa0056230 | Msa1421630 | -0.824689 | 7.046024e-54 | -8.615850e-47 |
| Msa0060410 | Msa1421630 | 0.811818 | 5.787350e-51 | -8.615850e-47 |
| Msa0063940 | Msa1421630 | 0.806219 | 9.149478e-50 | -8.615850e-47 |
| Msa0065670 | Msa1421630 | -0.810861 | 9.337836e-51 | -8.615850e-47 |
| Msa0073110 | Msa1421630 | 0.801061 | 1.075365e-48 | -8.615850e-47 |
| Msa0091220 | Msa1421630 | -0.842606 | 2.334068e-58 | -8.615850e-47 |
| Msa0091240 | Msa1421630 | -0.850732 | 1.404132e-60 | -8.615850e-47 |
| Msa0095810 | Msa1421630 | -0.816263 | 6.052100e-52 | -8.615850e-47 |
| Msa0100540 | Msa1421630 | 0.818281 | 2.127926e-52 | -8.615850e-47 |
| Msa0105140 | Msa1421630 | -0.815265 | 1.009885e-51 | -8.615850e-47 |
| Msa0106540 | Msa1421630 | 0.812036 | 5.187964e-51 | -8.615850e-47 |
| Msa0119240 | Msa1421630 | 0.807434 | 5.063996e-50 | -8.615850e-47 |
| Msa1361980 | Msa1421630 | 0.809961 | 1.460346e-50 | -8.615850e-47 |
| Msa1366140 | Msa1421630 | -0.817847 | 2.666294e-52 | -8.615850e-47 |
| Msa1387450 | Msa1421630 | -0.808284 | 3.340030e-50 | -8.615850e-47 |
| Msa1387570 | Msa1421630 | 0.810177 | 1.312104e-50 | -8.615850e-47 |
| Msa1396200 | Msa1421630 | -0.807075 | 6.033584e-50 | -8.615850e-47 |
| Msa1402010 | Msa1421630 | 0.825794 | 3.858791e-54 | -8.615850e-47 |
| Msa1405830 | Msa1421630 | 0.812494 | 4.121018e-51 | -8.615850e-47 |
| Msa1407810 | Msa1421630 | 0.827313 | 1.675887e-54 | -8.615850e-47 |
| Msa1413130 | Msa1421630 | 0.821023 | 5.031876e-53 | -8.615850e-47 |
| Msa1421630 | Msa1422860 | 0.808275 | 3.354992e-50 | -8.615850e-47 |
| Msa1421630 | Msa1428230 | -0.840116 | 1.055527e-57 | -8.615850e-47 |
| Msa1421630 | Msa1433360 | 0.835404 | 1.711821e-56 | -8.615850e-47 |
| Msa1421630 | Msa1437780 | 0.826716 | 2.328228e-54 | -8.615850e-47 |
| Msa1421630 | Msa1459130 | -0.806551 | 7.785789e-50 | -8.615850e-47 |
| Msa0606820 | Msa1421630 | 0.820604 | 6.283383e-53 | -8.615850e-47 |
| Msa0630440 | Msa1421630 | 0.808124 | 3.612692e-50 | -8.615850e-47 |
| Msa0661480 | Msa1421630 | 0.829700 | 4.445225e-55 | -8.615850e-47 |
| Msa0676570 | Msa1421630 | -0.822774 | 1.978465e-53 | -8.615850e-47 |
| Msa0680370 | Msa1421630 | 0.828085 | 1.093397e-54 | -8.615850e-47 |
| Msa0680450 | Msa1421630 | 0.820966 | 5.187993e-53 | -8.615850e-47 |
| Msa0685390 | Msa1421630 | -0.815464 | 9.120502e-52 | -8.615850e-47 |
| Msa0701800 | Msa1421630 | -0.806029 | 1.003291e-49 | -8.615850e-47 |
| Msa0707360 | Msa1421630 | 0.805793 | 1.124448e-49 | -8.615850e-47 |
| Msa0719750 | Msa1421630 | 0.816177 | 6.324439e-52 | -8.615850e-47 |
| Msa0726170 | Msa1421630 | -0.820752 | 5.810998e-53 | -8.615850e-47 |
| Msa0742370 | Msa1421630 | -0.822536 | 2.247521e-53 | -8.615850e-47 |
| Msa0758780 | Msa1421630 | -0.807940 | 3.953398e-50 | -8.615850e-47 |
| Msa0758810 | Msa1421630 | -0.804629 | 1.970599e-49 | -8.615850e-47 |
| Msa0768700 | Msa1421630 | 0.803639 | 3.166488e-49 | -8.615850e-47 |
| Msa0773960 | Msa1421630 | 0.803709 | 3.063393e-49 | -8.615850e-47 |
| Msa0779450 | Msa1421630 | -0.804498 | 2.098554e-49 | -8.615850e-47 |
| Msa0786600 | Msa1421630 | -0.807386 | 5.184923e-50 | -8.615850e-47 |
| Msa0795750 | Msa1421630 | 0.802855 | 4.602654e-49 | -8.615850e-47 |
| Msa0802760 | Msa1421630 | 0.814487 | 1.502992e-51 | -8.615850e-47 |
| Msa0813160 | Msa1421630 | 0.803291 | 3.739047e-49 | -8.615850e-47 |
| Msa0823480 | Msa1421630 | -0.819265 | 1.271487e-52 | -8.615850e-47 |
| Msa0838620 | Msa1421630 | -0.829845 | 4.098540e-55 | -8.615850e-47 |
| Msa0841050 | Msa1421630 | 0.834301 | 3.243831e-56 | -8.615850e-47 |
| Msa0129930 | Msa1421630 | -0.834830 | 2.389021e-56 | -8.615850e-47 |
| Msa0136180 | Msa1421630 | -0.815728 | 7.968912e-52 | -8.615850e-47 |
| Msa0139500 | Msa1421630 | 0.809913 | 1.495643e-50 | -8.615850e-47 |
| Msa0148960 | Msa1421630 | 0.812862 | 3.423618e-51 | -8.615850e-47 |
| Msa0151380 | Msa1421630 | -0.816345 | 5.802248e-52 | -8.615850e-47 |
| Msa0151510 | Msa1421630 | -0.809657 | 1.697944e-50 | -8.615850e-47 |
| Msa0154880 | Msa1421630 | -0.802552 | 5.313572e-49 | -8.615850e-47 |
| Msa0154890 | Msa1421630 | -0.814851 | 1.248096e-51 | -8.615850e-47 |
| Msa0173250 | Msa1421630 | 0.827318 | 1.671235e-54 | -8.615850e-47 |
| Msa0183310 | Msa1421630 | -0.844531 | 7.135136e-59 | -8.615850e-47 |
| Msa0184500 | Msa1421630 | 0.800098 | 1.690070e-48 | -8.615850e-47 |
| Msa0203080 | Msa1421630 | 0.808661 | 2.775791e-50 | -8.615850e-47 |
| Msa0216150 | Msa1421630 | -0.807107 | 5.941694e-50 | -8.615850e-47 |
| Msa0224110 | Msa1421630 | 0.804032 | 2.623952e-49 | -8.615850e-47 |
| Msa0229750 | Msa1421630 | -0.803278 | 3.762673e-49 | -8.615850e-47 |
| Msa1266120 | Msa1421630 | -0.821976 | 3.032204e-53 | -8.615850e-47 |
| Msa1273320 | Msa1421630 | 0.811993 | 5.302998e-51 | -8.615850e-47 |
| Msa1295210 | Msa1421630 | -0.801199 | 1.007598e-48 | -8.615850e-47 |
| Msa1332340 | Msa1421630 | -0.815499 | 8.958883e-52 | -8.615850e-47 |
| Msa1334560 | Msa1421630 | 0.800731 | 1.255856e-48 | -8.615850e-47 |
| Msa0364910 | Msa1421630 | -0.812451 | 4.211128e-51 | -8.615850e-47 |
| Msa0365210 | Msa1421630 | 0.810980 | 8.802103e-51 | -8.615850e-47 |
| Msa0371350 | Msa1421630 | -0.807587 | 4.700003e-50 | -8.615850e-47 |
| Msa0375930 | Msa1421630 | -0.825581 | 4.334633e-54 | -8.615850e-47 |
| Msa0387740 | Msa1421630 | -0.806372 | 8.492224e-50 | -8.615850e-47 |
| Msa0412580 | Msa1421630 | -0.820660 | 6.099265e-53 | -8.615850e-47 |
| Msa0424570 | Msa1421630 | -0.826421 | 2.737776e-54 | -8.615850e-47 |
| Msa0437440 | Msa1421630 | -0.813277 | 2.777199e-51 | -8.615850e-47 |
| Msa0438680 | Msa1421630 | -0.814386 | 1.581730e-51 | -8.615850e-47 |
| Msa0447870 | Msa1421630 | 0.811993 | 5.301776e-51 | -8.615850e-47 |
| Msa0457070 | Msa1421630 | -0.820876 | 5.440376e-53 | -8.615850e-47 |
| Msa1014550 | Msa1421630 | -0.827415 | 1.584604e-54 | -8.615850e-47 |
| Msa1015360 | Msa1421630 | 0.852525 | 4.359240e-61 | -8.615850e-47 |
| Msa1022420 | Msa1421630 | 0.835028 | 2.129263e-56 | -8.615850e-47 |
| Msa1041060 | Msa1421630 | 0.815539 | 8.776466e-52 | -8.615850e-47 |
| Msa1042300 | Msa1421630 | 0.804423 | 2.176214e-49 | -8.615850e-47 |
| Msa1044250 | Msa1421630 | 0.840982 | 6.262755e-58 | -8.615850e-47 |
| Msa1055520 | Msa1421630 | -0.811398 | 7.142937e-51 | -8.615850e-47 |
| Msa1056890 | Msa1421630 | 0.802460 | 5.551237e-49 | -8.615850e-47 |
| Msa1093190 | Msa1421630 | -0.813327 | 2.707660e-51 | -8.615850e-47 |
| Msa1101610 | Msa1421630 | -0.802347 | 5.857202e-49 | -8.615850e-47 |
| Msa0267450 | Msa1421630 | -0.817058 | 4.015806e-52 | -8.615850e-47 |
| Msa0267510 | Msa1421630 | -0.819883 | 9.193499e-53 | -8.615850e-47 |
| Msa0269220 | Msa1421630 | -0.805416 | 1.348857e-49 | -8.615850e-47 |
| Msa0276850 | Msa1421630 | 0.800882 | 1.169734e-48 | -8.615850e-47 |
| Msa0276860 | Msa1421630 | 0.831020 | 2.114899e-55 | -8.615850e-47 |
| Msa0313900 | Msa1421630 | 0.802725 | 4.894307e-49 | -8.615850e-47 |
| Msa0318490 | Msa1421630 | 0.807430 | 5.073666e-50 | -8.615850e-47 |
| Msa0326170 | Msa1421630 | -0.815138 | 1.077786e-51 | -8.615850e-47 |
| Msa0331070 | Msa1421630 | -0.820578 | 6.370638e-53 | -8.615850e-47 |
| Msa1149910 | Msa1421630 | 0.813447 | 2.548212e-51 | -8.615850e-47 |
| Msa1165460 | Msa1421630 | 0.857408 | 1.665688e-62 | -8.615850e-47 |
| Msa1169590 | Msa1421630 | -0.801977 | 6.980180e-49 | -8.615850e-47 |
| Msa1184680 | Msa1421630 | 0.838304 | 3.114391e-57 | -8.615850e-47 |
| Msa0484210 | Msa1421630 | -0.824235 | 9.008070e-54 | -8.615850e-47 |
| Msa0501080 | Msa1421630 | 0.801325 | 9.495406e-49 | -8.615850e-47 |
| Msa0506750 | Msa1421630 | 0.847063 | 1.465635e-59 | -8.615850e-47 |
| Msa0516000 | Msa1421630 | -0.829660 | 4.545524e-55 | -8.615850e-47 |
| Msa0521610 | Msa1421630 | 0.814163 | 1.771661e-51 | -8.615850e-47 |
| Msa0525180 | Msa1421630 | -0.805221 | 1.481966e-49 | -8.615850e-47 |
| Msa0565700 | Msa1421630 | 0.801687 | 8.006149e-49 | -8.615850e-47 |
| Msa0567330 | Msa1421630 | 0.834594 | 2.738192e-56 | -8.615850e-47 |
| Msa0567570 | Msa1421630 | 0.821740 | 3.437751e-53 | -8.615850e-47 |
| Msa0576320 | Msa1421630 | 0.827592 | 1.437098e-54 | -8.615850e-47 |
| Msa0601380 | Msa1421630 | 0.931474 | 3.579677e-94 | -8.615850e-47 |
| Msa0853590 | Msa1421630 | 0.809895 | 1.509098e-50 | -8.615850e-47 |
| Msa0862480 | Msa1421630 | -0.824482 | 7.881054e-54 | -8.615850e-47 |
| Msa0865420 | Msa1421630 | 0.802091 | 6.613268e-49 | -8.615850e-47 |
| Msa0880910 | Msa1421630 | 0.807727 | 4.389267e-50 | -8.615850e-47 |
| Msa0903340 | Msa1421630 | 0.800019 | 1.753851e-48 | -8.615850e-47 |
| Msa0921390 | Msa1421630 | 0.820604 | 6.282912e-53 | -8.615850e-47 |
| Msa0930770 | Msa1421630 | 0.812522 | 4.063474e-51 | -8.615850e-47 |
| Msa0964400 | Msa1421630 | -0.801695 | 7.976228e-49 | -8.615850e-47 |
| Msa0967780 | Msa1421630 | 0.813270 | 2.787096e-51 | -8.615850e-47 |
| Msa0979530 | Msa1421630 | 0.812458 | 4.197603e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421630 | MtrunA17_Chr4g0026371 | 91.171 | 589 | 44 | 1 | 53 | 633 | 1 | 589 | 0.0 | 1022 |
| Msa1421630 | MtrunA17_Chr5g0434001 | 46.555 | 595 | 304 | 5 | 51 | 633 | 15 | 607 | 0.0 | 558 |
| Msa1421630 | MtrunA17_Chr8g0375501 | 46.610 | 590 | 296 | 7 | 59 | 633 | 6 | 591 | 0.0 | 557 |
| Msa1421630 | MtrunA17_Chr6g0480551 | 45.377 | 584 | 305 | 4 | 62 | 633 | 7 | 588 | 0.0 | 540 |
| Msa1421630 | MtrunA17_Chr2g0277491 | 33.735 | 581 | 355 | 9 | 72 | 633 | 14 | 583 | 1.57e-96 | 307 |
| Msa1421630 | MtrunA17_Chr8g0342031 | 30.836 | 574 | 337 | 9 | 111 | 631 | 80 | 646 | 5.10e-94 | 303 |
| Msa1421630 | MtrunA17_Chr8g0380651 | 32.933 | 583 | 351 | 12 | 76 | 633 | 22 | 589 | 6.85e-94 | 301 |
| Msa1421630 | MtrunA17_Chr1g0150181 | 29.412 | 629 | 381 | 11 | 61 | 631 | 12 | 635 | 1.94e-89 | 290 |
| Msa1421630 | MtrunA17_Chr3g0136881 | 31.023 | 577 | 338 | 10 | 110 | 631 | 63 | 634 | 4.80e-87 | 284 |
| Msa1421630 | MtrunA17_Chr4g0065301 | 27.628 | 666 | 388 | 15 | 51 | 633 | 2 | 656 | 5.08e-74 | 250 |
| Msa1421630 | MtrunA17_Chr5g0448371 | 26.582 | 632 | 373 | 14 | 81 | 631 | 42 | 663 | 8.71e-58 | 206 |
| Msa1421630 | MtrunA17_Chr3g0120461 | 26.424 | 632 | 374 | 15 | 81 | 631 | 36 | 657 | 5.35e-56 | 201 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421630 | AT1G08350.3 | 52.105 | 570 | 262 | 5 | 74 | 633 | 21 | 589 | 0.0 | 615 |
| Msa1421630 | AT1G08350.2 | 52.105 | 570 | 262 | 5 | 74 | 633 | 21 | 589 | 0.0 | 615 |
| Msa1421630 | AT1G08350.1 | 52.071 | 507 | 241 | 2 | 129 | 633 | 2 | 508 | 0.0 | 556 |
| Msa1421630 | AT1G14670.1 | 46.206 | 593 | 306 | 5 | 53 | 633 | 1 | 592 | 0.0 | 549 |
| Msa1421630 | AT5G37310.1 | 46.441 | 590 | 303 | 4 | 56 | 633 | 5 | 593 | 0.0 | 548 |
| Msa1421630 | AT5G37310.2 | 46.441 | 590 | 303 | 4 | 56 | 633 | 5 | 593 | 0.0 | 548 |
| Msa1421630 | AT2G01970.1 | 45.363 | 593 | 311 | 5 | 53 | 633 | 1 | 592 | 0.0 | 548 |
| Msa1421630 | AT1G08350.4 | 49.709 | 515 | 244 | 6 | 60 | 564 | 11 | 520 | 1.45e-177 | 515 |
| Msa1421630 | AT3G13772.1 | 31.142 | 578 | 330 | 9 | 111 | 631 | 73 | 639 | 4.76e-96 | 308 |
| Msa1421630 | AT1G10950.1 | 32.582 | 577 | 359 | 8 | 76 | 633 | 24 | 589 | 8.24e-96 | 306 |
| Msa1421630 | AT2G24170.1 | 30.781 | 640 | 377 | 12 | 53 | 631 | 1 | 635 | 2.82e-95 | 306 |
| Msa1421630 | AT1G55130.1 | 28.616 | 636 | 379 | 11 | 60 | 631 | 11 | 635 | 6.34e-90 | 292 |
| Msa1421630 | AT5G25100.1 | 28.956 | 632 | 383 | 11 | 61 | 631 | 16 | 642 | 2.90e-83 | 275 |
| Msa1421630 | AT5G25100.2 | 29.112 | 608 | 365 | 11 | 85 | 631 | 47 | 649 | 4.46e-83 | 274 |
| Msa1421630 | AT5G10840.1 | 29.430 | 632 | 382 | 12 | 59 | 631 | 20 | 646 | 7.49e-83 | 274 |
| Msa1421630 | AT5G35160.2 | 26.646 | 638 | 372 | 14 | 81 | 633 | 32 | 658 | 5.97e-63 | 220 |
| Msa1421630 | AT5G35160.3 | 26.646 | 638 | 372 | 14 | 81 | 633 | 32 | 658 | 5.97e-63 | 220 |
| Msa1421630 | AT5G35160.4 | 26.646 | 638 | 372 | 14 | 81 | 633 | 32 | 658 | 5.97e-63 | 220 |
| Msa1421630 | AT5G35160.1 | 27.059 | 595 | 346 | 13 | 116 | 633 | 47 | 630 | 3.36e-61 | 215 |
| Msa1421630 | AT4G12650.1 | 27.330 | 633 | 367 | 14 | 81 | 631 | 29 | 650 | 2.74e-59 | 210 |
| Msa1421630 | AT2G24170.2 | 28.125 | 448 | 258 | 10 | 53 | 440 | 1 | 444 | 5.41e-49 | 177 |
Find 175 sgRNAs with CRISPR-Local
Find 448 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTGATGATCTTCCATTT+TGG | 0.104752 | tig0025281:+8343 | Msa1421630:CDS |
| AGCAAGTTAAACGATAATTT+TGG | 0.129845 | tig0025281:+12910 | Msa1421630:three_prime_UTR |
| TTACAACTATCCTTCTTTAT+TGG | 0.166873 | tig0025281:+12299 | Msa1421630:CDS |
| TCGGTTTAGGTCCAAGTTTC+AGG | 0.182537 | tig0025281:+11212 | Msa1421630:CDS |
| TATGCTTTCTTCCTGATATT+TGG | 0.187363 | tig0025281:+12341 | Msa1421630:CDS |
| ATCGTGATTATTAGTTTATT+TGG | 0.195282 | tig0025281:+11144 | Msa1421630:CDS |
| ACACCATTTCAAATGTTTAT+TGG | 0.207200 | tig0025281:+11294 | Msa1421630:CDS |
| ATACACTCTTCCTGGCATTT+TGG | 0.207826 | tig0025281:+11389 | Msa1421630:CDS |
| GACCACTCCAAAGTGTAATT+TGG | 0.216068 | tig0025281:+12776 | Msa1421630:three_prime_UTR |
| AATTCACTTATTCGGTTATC+TGG | 0.221535 | tig0025281:+8547 | Msa1421630:CDS |
| AAGCTTACAATTGATGAAAT+TGG | 0.229144 | tig0025281:+8276 | Msa1421630:CDS |
| ACATTATTGCAATATCTTAC+AGG | 0.260840 | tig0025281:+11091 | Msa1421630:CDS |
| CCCATCCATTCTCAGCAAAT+TGG | 0.263581 | tig0025281:-10910 | None:intergenic |
| GATTCTATCTTCTTCACTAT+TGG | 0.267322 | tig0025281:-8159 | None:intergenic |
| TAGCGTACACCTGGTGTAAT+TGG | 0.283426 | tig0025281:-11347 | None:intergenic |
| ATGATTGATACTCTTCTCTT+TGG | 0.294726 | tig0025281:+12473 | Msa1421630:three_prime_UTR |
| ATTCTATCTTCTTCACTATT+GGG | 0.298051 | tig0025281:-8158 | None:intergenic |
| AGAGGGTAGGTTGTTAGAAT+TGG | 0.300458 | tig0025281:+12662 | Msa1421630:three_prime_UTR |
| CAAACTGAACATGTGTAAAA+AGG | 0.301015 | tig0025281:-8428 | None:intergenic |
| TGATGTTAAATTCACTTATT+CGG | 0.301127 | tig0025281:+8539 | Msa1421630:CDS |
| CACAGTTTGGAAGAGCTTTA+CGG | 0.324619 | tig0025281:+12619 | Msa1421630:three_prime_UTR |
| CGATCCCATTACTTGCATTC+GGG | 0.330440 | tig0025281:+11175 | Msa1421630:CDS |
| GAGTAATTGGATATCGGTTT+AGG | 0.339176 | tig0025281:+11199 | Msa1421630:CDS |
| AGAAAGGAGTGGAATTATAG+AGG | 0.344095 | tig0025281:+12644 | Msa1421630:three_prime_UTR |
| TTAGAAGAAAACACAATCTA+TGG | 0.345770 | tig0025281:+7584 | Msa1421630:intron |
| GTTATATCTACAGCGCGATT+TGG | 0.345977 | tig0025281:-8501 | None:intergenic |
| GTTTGTATGAGTTCAAATTC+AGG | 0.346786 | tig0025281:+8220 | Msa1421630:CDS |
| TCGATCCCATTACTTGCATT+CGG | 0.351439 | tig0025281:+11174 | Msa1421630:CDS |
| AACTGATGGCACCAAATATC+AGG | 0.360427 | tig0025281:-12352 | None:intergenic |
| CTTCTGTTCCTAGCAATTAT+CGG | 0.376000 | tig0025281:+10785 | Msa1421630:CDS |
| GAGAAGAGTGTTAGTCTAGC+TGG | 0.385735 | tig0025281:+11024 | Msa1421630:CDS |
| ACCGTAACCAAACATGAAAA+TGG | 0.387429 | tig0025281:-12240 | None:intergenic |
| CATACCTCCACCACCATTCA+TGG | 0.389249 | tig0025281:-11491 | None:intergenic |
| CTAGCGCAAATGAAGAAGAT+AGG | 0.390988 | tig0025281:+8848 | Msa1421630:CDS |
| GAAGATGAAAATTTGATTCA+TGG | 0.394649 | tig0025281:+8384 | Msa1421630:CDS |
| GGAAGCTGTTGAATCTCTTT+CGG | 0.396624 | tig0025281:-11258 | None:intergenic |
| AAATCCATGGCTGCACAGTT+TGG | 0.401672 | tig0025281:+12606 | Msa1421630:three_prime_UTR |
| TACAAAATATACACTCTTCC+TGG | 0.403164 | tig0025281:+11381 | Msa1421630:CDS |
| TCTGGAATGCCACAGAATTA+CGG | 0.407619 | tig0025281:+8565 | Msa1421630:CDS |
| ACAGTTTGGAAGAGCTTTAC+GGG | 0.409540 | tig0025281:+12620 | Msa1421630:three_prime_UTR |
| CCATGGATTTAGTCTTGATT+CGG | 0.410770 | tig0025281:-12593 | None:intergenic |
| GTCACAGCTGGACTCCCATT+GGG | 0.412663 | tig0025281:+11114 | Msa1421630:CDS |
| GTCCAAGTTTCAGGTCCCCT+TGG | 0.415276 | tig0025281:+11221 | Msa1421630:CDS |
| CATGGCCAATTTGCTGAGAA+TGG | 0.430352 | tig0025281:+10905 | Msa1421630:CDS |
| TCCAAGTTTCAGGTCCCCTT+GGG | 0.431667 | tig0025281:+11222 | Msa1421630:CDS |
| GAGTGAAGAAGAGGAGAAGA+AGG | 0.432388 | tig0025281:-7629 | None:intergenic |
| AACATCAATGCCAACATCCT+TGG | 0.435136 | tig0025281:-8523 | None:intergenic |
| ACTCACATTTAACTAACATC+AGG | 0.435532 | tig0025281:-12847 | None:intergenic |
| CAGATGAAAGAGCGAATAGA+AGG | 0.436318 | tig0025281:-10853 | None:intergenic |
| TCAAATATCTCGTATAAAGC+AGG | 0.441728 | tig0025281:-8707 | None:intergenic |
| TATTACATTCAAAGAGTTGA+AGG | 0.441822 | tig0025281:+6810 | Msa1421630:CDS |
| GAAGAAGGAGAATGAGGTGA+TGG | 0.443169 | tig0025281:-7614 | None:intergenic |
| AAGAGATTCAACAGCTTCCT+TGG | 0.444008 | tig0025281:+11262 | Msa1421630:CDS |
| GGTTGTTAGAATTGGAGATC+AGG | 0.446325 | tig0025281:+12670 | Msa1421630:three_prime_UTR |
| ACCCAAGGGGACCTGAAACT+TGG | 0.452480 | tig0025281:-11223 | None:intergenic |
| TTTGATAACAGTTTATTCCT+TGG | 0.452715 | tig0025281:+12514 | Msa1421630:three_prime_UTR |
| GTCGTAGAAGTGAAAGCATT+TGG | 0.455452 | tig0025281:+8474 | Msa1421630:CDS |
| TGGGATTCTTTACATTGGTC+CGG | 0.456365 | tig0025281:+11044 | Msa1421630:CDS |
| AGTTTGATGTTCTTTACAAC+GGG | 0.456822 | tig0025281:+8445 | Msa1421630:CDS |
| CCAGGTGTACGCTAGTTTGT+GGG | 0.458018 | tig0025281:+11356 | Msa1421630:CDS |
| AGCTTACAAGATTAGCAGTT+GGG | 0.461088 | tig0025281:-8956 | None:intergenic |
| CACCATGACTGTATGGATAG+AGG | 0.461983 | tig0025281:-10811 | None:intergenic |
| ACCAGGTGTACGCTAGTTTG+TGG | 0.462770 | tig0025281:+11355 | Msa1421630:CDS |
| TTGTGTATCGTAAAGTTCAT+TGG | 0.462873 | tig0025281:+8631 | Msa1421630:CDS |
| TTCAACAGCTTCCTTGGTAC+AGG | 0.467031 | tig0025281:+11268 | Msa1421630:CDS |
| GAAGAGCTTTACGGGAAGAA+AGG | 0.469317 | tig0025281:+12628 | Msa1421630:three_prime_UTR |
| CCTCCAATAAACATTTGAAA+TGG | 0.469524 | tig0025281:-11297 | None:intergenic |
| ATTACGGTTTGAGAATAGAA+TGG | 0.470012 | tig0025281:+8581 | Msa1421630:CDS |
| GGTCACAGCTGGACTCCCAT+TGG | 0.470714 | tig0025281:+11113 | Msa1421630:CDS |
| AAGAAGGAGAATGAGGTGAT+GGG | 0.473388 | tig0025281:-7613 | None:intergenic |
| ATGAAAATTTGATTCATGGT+GGG | 0.477845 | tig0025281:+8388 | Msa1421630:CDS |
| GAATAGAAGGACAAGCCAAC+TGG | 0.478682 | tig0025281:-10840 | None:intergenic |
| GCCAATTTGCTGAGAATGGA+TGG | 0.479155 | tig0025281:+10909 | Msa1421630:CDS |
| TGATGAAATTGGTATCTTGA+AGG | 0.481322 | tig0025281:+8287 | Msa1421630:CDS |
| GTGAAGAAGATAGAATCTCT+TGG | 0.482913 | tig0025281:+8165 | Msa1421630:CDS |
| CGGATATCTCTTTGTACCCA+AGG | 0.484114 | tig0025281:-11238 | None:intergenic |
| CCATTTCAAATGTTTATTGG+AGG | 0.484636 | tig0025281:+11297 | Msa1421630:CDS |
| AGAGGAGAAGAAGGAGAATG+AGG | 0.484850 | tig0025281:-7620 | None:intergenic |
| AGCAAAACCAAATTACACTT+TGG | 0.485747 | tig0025281:-12783 | None:intergenic |
| AAGAAGATAGGGAGGTTGGT+TGG | 0.486649 | tig0025281:+8860 | Msa1421630:CDS |
| TGGATGAAAATTGCACCAAA+AGG | 0.486946 | tig0025281:-11327 | None:intergenic |
| TGAAAATTTGATTCATGGTG+GGG | 0.492528 | tig0025281:+8389 | Msa1421630:CDS |
| TTTGTATGAGTTCAAATTCA+GGG | 0.499515 | tig0025281:+8221 | Msa1421630:CDS |
| GAGAGTCCACCATGACTGTA+TGG | 0.501120 | tig0025281:-10818 | None:intergenic |
| AAGATTGTAGAGTGAAGAAG+AGG | 0.501525 | tig0025281:-7638 | None:intergenic |
| AATAAGGACGGGTGCGGAGG+AGG | 0.503888 | tig0025281:-8910 | None:intergenic |
| TCACGATAATAGAGCCCAAT+GGG | 0.504953 | tig0025281:-11128 | None:intergenic |
| GAAAGGAGTGGAATTATAGA+GGG | 0.514988 | tig0025281:+12645 | Msa1421630:three_prime_UTR |
| AATGGTGATCGTTTGAGCAA+TGG | 0.518346 | tig0025281:+8198 | Msa1421630:CDS |
| TGTTGACCTGGGATTGTTGA+GGG | 0.520533 | tig0025281:-7739 | None:intergenic |
| CATTATTGCAATATCTTACA+GGG | 0.521402 | tig0025281:+11092 | Msa1421630:CDS |
| ATATCTTACAGGGTCACAGC+TGG | 0.526781 | tig0025281:+11102 | Msa1421630:CDS |
| CTAGCTGGGATTCTTTACAT+TGG | 0.529641 | tig0025281:+11039 | Msa1421630:CDS |
| ATCTTGAAGGAAGCTATAAA+CGG | 0.530516 | tig0025281:+8300 | Msa1421630:CDS |
| CGCACTGTAGCCAATAAAGA+AGG | 0.533327 | tig0025281:-12309 | None:intergenic |
| GACGAGAAGATATCATTGAC+AGG | 0.535592 | tig0025281:+6648 | Msa1421630:CDS |
| TTTCCTTGAGACTGCGGTGT+CGG | 0.539986 | tig0025281:-6612 | None:intergenic |
| CCTCCGACACCGCAGTCTCA+AGG | 0.541195 | tig0025281:+6609 | Msa1421630:CDS |
| AGAAGAGTGTTAGTCTAGCT+GGG | 0.542187 | tig0025281:+11025 | Msa1421630:CDS |
| CTCAGCAAATTGGCCATGGA+AGG | 0.542407 | tig0025281:-10900 | None:intergenic |
| CTCACATTTAACTAACATCA+GGG | 0.545109 | tig0025281:-12846 | None:intergenic |
| TAGCGCAAATGAAGAAGATA+GGG | 0.545410 | tig0025281:+8849 | Msa1421630:CDS |
| CAGTTTGATGTTCTTTACAA+CGG | 0.550867 | tig0025281:+8444 | Msa1421630:CDS |
| AATGAAGAAGATAGGGAGGT+TGG | 0.554718 | tig0025281:+8856 | Msa1421630:CDS |
| TCTTCCAAACTGTGCAGCCA+TGG | 0.557389 | tig0025281:-12610 | None:intergenic |
| ACCATGACTGTATGGATAGA+GGG | 0.558598 | tig0025281:-10810 | None:intergenic |
| CAATTTGCAATCAAACATGT+TGG | 0.559250 | tig0025281:-12729 | None:intergenic |
| CATTCTCAGCAAATTGGCCA+TGG | 0.562379 | tig0025281:-10904 | None:intergenic |
| AGAAGGAGAATGAGGTGATG+GGG | 0.562448 | tig0025281:-7612 | None:intergenic |
| GGATATCTCTTTGTACCCAA+GGG | 0.562534 | tig0025281:-11237 | None:intergenic |
| CCCACAAACTAGCGTACACC+TGG | 0.564764 | tig0025281:-11356 | None:intergenic |
| TAGCTTACAAGATTAGCAGT+TGG | 0.564792 | tig0025281:-8957 | None:intergenic |
| TAGGTCCCCTCAACAATCCC+AGG | 0.566359 | tig0025281:+7733 | Msa1421630:CDS |
| AGTGTCGCAGCCAAAATGCC+AGG | 0.566462 | tig0025281:-11399 | None:intergenic |
| CCTTGAGACTGCGGTGTCGG+AGG | 0.571134 | tig0025281:-6609 | None:intergenic |
| TACTCAACAGCATCCTTCCA+TGG | 0.574888 | tig0025281:+10887 | Msa1421630:CDS |
| TCTCTTGGAGAAGTTCTCAA+TGG | 0.576224 | tig0025281:+8180 | Msa1421630:CDS |
| GGAGTGGAATTATAGAGGGT+AGG | 0.577279 | tig0025281:+12649 | Msa1421630:three_prime_UTR |
| CAAAGAAACTCTGAAACTGA+TGG | 0.577705 | tig0025281:-12366 | None:intergenic |
| ATTGTTGCGCTCGTAAATGT+TGG | 0.577891 | tig0025281:+11438 | Msa1421630:CDS |
| CAAATATCTCGTATAAAGCA+GGG | 0.578014 | tig0025281:-8706 | None:intergenic |
| GACATATGTTCAACTATCTG+TGG | 0.579107 | tig0025281:+11464 | Msa1421630:CDS |
| TCAAATCACATCTACAACGT+TGG | 0.580133 | tig0025281:+7681 | Msa1421630:CDS |
| AGACTGCGGTGTCGGAGGAG+AGG | 0.580473 | tig0025281:-6604 | None:intergenic |
| GAAAATTTGATTCATGGTGG+GGG | 0.580878 | tig0025281:+8390 | Msa1421630:CDS |
| AACGTTGTAGATGTGATTTG+AGG | 0.581878 | tig0025281:-7679 | None:intergenic |
| GTAGATATAACCAAGGATGT+TGG | 0.585401 | tig0025281:+8513 | Msa1421630:CDS |
| CGATAATTGCTAGGAACAGA+AGG | 0.585429 | tig0025281:-10784 | None:intergenic |
| CTTGGTTGAATTCTTCAACA+AGG | 0.585822 | tig0025281:+12532 | Msa1421630:three_prime_UTR |
| ATTTGAGGTTGATGCGGTAA+CGG | 0.588242 | tig0025281:-7664 | None:intergenic |
| CCGAATCAAGACTAAATCCA+TGG | 0.588570 | tig0025281:+12593 | Msa1421630:three_prime_UTR |
| GATGAAAATTTGATTCATGG+TGG | 0.589754 | tig0025281:+8387 | Msa1421630:CDS |
| AGAGGGTACCGATAATTGCT+AGG | 0.591090 | tig0025281:-10793 | None:intergenic |
| GTCATGGTGGACTCTCCAGT+TGG | 0.591186 | tig0025281:+10825 | Msa1421630:CDS |
| TTTATACGAGATATTTGAAG+AGG | 0.593080 | tig0025281:+8712 | Msa1421630:CDS |
| TGCAGATCTGTGCTGTGTGG+TGG | 0.593952 | tig0025281:+12209 | Msa1421630:intron |
| TGGCAACCTCATAAACAACC+AGG | 0.593967 | tig0025281:-12709 | None:intergenic |
| TGGAAGACCATGAATGGTGG+TGG | 0.594903 | tig0025281:+11484 | Msa1421630:CDS |
| TCTCAAGCACAAAGTAACAT+TGG | 0.601261 | tig0025281:+12441 | Msa1421630:three_prime_UTR |
| TCATCGTTTCCTTGAGACTG+CGG | 0.603762 | tig0025281:-6618 | None:intergenic |
| ATCACGATAATAGAGCCCAA+TGG | 0.607721 | tig0025281:-11129 | None:intergenic |
| TTATACGAGATATTTGAAGA+GGG | 0.612050 | tig0025281:+8713 | Msa1421630:CDS |
| AAGATATTGCAATAATGTTG+AGG | 0.614798 | tig0025281:-11086 | None:intergenic |
| ATTCTCAAACCGTAATTCTG+TGG | 0.615995 | tig0025281:-8574 | None:intergenic |
| TTGTTGACCTGGGATTGTTG+AGG | 0.616921 | tig0025281:-7740 | None:intergenic |
| GGTCATTAGACACACGATTG+AGG | 0.618324 | tig0025281:-12757 | None:intergenic |
| GTTGGTTGGAAGTCAATCCA+TGG | 0.623172 | tig0025281:+8874 | Msa1421630:CDS |
| ACCCTCTATCCATACAGTCA+TGG | 0.624597 | tig0025281:+10809 | Msa1421630:CDS |
| CTTGTTGAAGAATTCAACCA+AGG | 0.628061 | tig0025281:-12531 | None:intergenic |
| TATCTGTGGAAGACCATGAA+TGG | 0.629462 | tig0025281:+11478 | Msa1421630:CDS |
| AACCAAATTACACTTTGGAG+TGG | 0.632487 | tig0025281:-12778 | None:intergenic |
| ATAGAGAATGCAACAAACAC+CGG | 0.633680 | tig0025281:-11063 | None:intergenic |
| ATCCCATTACTTGCATTCGG+GGG | 0.634423 | tig0025281:+11177 | Msa1421630:CDS |
| CGCAAATGAAGAAGATAGGG+AGG | 0.637904 | tig0025281:+8852 | Msa1421630:CDS |
| GATCCCATTACTTGCATTCG+GGG | 0.641089 | tig0025281:+11176 | Msa1421630:CDS |
| CTCTATCCATACAGTCATGG+TGG | 0.644933 | tig0025281:+10812 | Msa1421630:CDS |
| GTTGACCTGGGATTGTTGAG+GGG | 0.648949 | tig0025281:-7738 | None:intergenic |
| AAGACCATGAATGGTGGTGG+AGG | 0.651799 | tig0025281:+11487 | Msa1421630:CDS |
| GGCAACCTCATAAACAACCA+GGG | 0.655525 | tig0025281:-12708 | None:intergenic |
| CAAAAGCAAAATGATGACGA+AGG | 0.660240 | tig0025281:-8670 | None:intergenic |
| CAGGTGTACGCTAGTTTGTG+GGG | 0.666363 | tig0025281:+11357 | Msa1421630:CDS |
| CCAATTTGCTGAGAATGGAT+GGG | 0.667467 | tig0025281:+10910 | Msa1421630:CDS |
| TATGCAAGATCAAGAATGAG+CGG | 0.669114 | tig0025281:+12272 | Msa1421630:CDS |
| GAGCGCAACAATCACAATGA+CGG | 0.674592 | tig0025281:-11427 | None:intergenic |
| GTGTGCAGATCTGTGCTGTG+TGG | 0.676378 | tig0025281:+12206 | Msa1421630:intron |
| GATATCTCTTTGTACCCAAG+GGG | 0.684564 | tig0025281:-11236 | None:intergenic |
| GCTTTACGGGAAGAAAGGAG+TGG | 0.689124 | tig0025281:+12633 | Msa1421630:three_prime_UTR |
| GCAACCTCATAAACAACCAG+GGG | 0.692045 | tig0025281:-12707 | None:intergenic |
| GAGGCTTGAATACATCACCA+TGG | 0.694814 | tig0025281:-8891 | None:intergenic |
| TCGCGCTGTAGATATAACCA+AGG | 0.701856 | tig0025281:+8506 | Msa1421630:CDS |
| GATGTGATTTGAGGTTGATG+CGG | 0.702090 | tig0025281:-7670 | None:intergenic |
| AATGGTGTTCTCCTGTACCA+AGG | 0.705648 | tig0025281:-11279 | None:intergenic |
| CTGTGGAAGACCATGAATGG+TGG | 0.732393 | tig0025281:+11481 | Msa1421630:CDS |
| GCAGTCTCAAGGAAACGATG+AGG | 0.734571 | tig0025281:+6620 | Msa1421630:CDS |
| CAACCTCATAAACAACCAGG+GGG | 0.765718 | tig0025281:-12706 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTGACTATATTTTTTA+GGG | + | tig0025281:6982-7001 | Msa1421630:intron | 10.0% |
| !! | AAATGAAAATCAAATAATTA+AGG | + | tig0025281:8078-8097 | Msa1421630:intron | 10.0% |
| !! | AATGAAAATCAAATAATTAA+GGG | + | tig0025281:8079-8098 | Msa1421630:intron | 10.0% |
| !!! | GTTTTCTTATTTTAATTTTC+AGG | + | tig0025281:6742-6761 | Msa1421630:intron | 15.0% |
| !!! | AATATAGTCAATTTTGTTTT+TGG | - | tig0025281:6977-6996 | None:intergenic | 15.0% |
| !!! | CAAAATTGACTATATTTTTT+AGG | + | tig0025281:6981-7000 | Msa1421630:intron | 15.0% |
| !! | AAAAAAAAAAACTAGAAAGT+AGG | + | tig0025281:7438-7457 | Msa1421630:intron | 15.0% |
| !! | AAATGAAAATAGAATGAAAA+TGG | - | tig0025281:7778-7797 | None:intergenic | 15.0% |
| !! | ATAGAAAAATTGAATGAAAA+TGG | - | tig0025281:7819-7838 | None:intergenic | 15.0% |
| !! | ATGAAAATCAAATAATTAAG+GGG | + | tig0025281:8080-8099 | Msa1421630:intron | 15.0% |
| !! | ATTGTAAAATGAATATAGTT+AGG | - | tig0025281:8819-8838 | None:intergenic | 15.0% |
| !!! | CTATATTCATTTTACAATTT+AGG | + | tig0025281:8821-8840 | Msa1421630:intron | 15.0% |
| !! | TTAAATATTTCTTGATTGTT+TGG | - | tig0025281:9420-9439 | None:intergenic | 15.0% |
| !!! | CTTTTAATATTCTATATTCA+AGG | - | tig0025281:10464-10483 | None:intergenic | 15.0% |
| !! | AGAAATTAAATTGAAAAGAA+AGG | - | tig0025281:10688-10707 | None:intergenic | 15.0% |
| !!! | TTCTTTTCAATTTAATTTCT+TGG | + | tig0025281:10688-10707 | Msa1421630:intron | 15.0% |
| !! | GGTTAAAAATGAAATAAAAA+TGG | - | tig0025281:10973-10992 | None:intergenic | 15.0% |
| !!! | ACTTTGAAACTAAAATTTAT+CGG | - | tig0025281:11911-11930 | None:intergenic | 15.0% |
| !!! | ACAATTAATAATTTTTCCCT+TGG | - | tig0025281:7045-7064 | None:intergenic | 20.0% |
| !!! | TGATTTTCTCAAATTATTAC+CGG | - | tig0025281:7942-7961 | None:intergenic | 20.0% |
| !! | AAATAATTAAGGGGTTTAAT+TGG | + | tig0025281:8089-8108 | Msa1421630:intron | 20.0% |
| !! | TGATGTTAAATTCACTTATT+CGG | + | tig0025281:8539-8558 | Msa1421630:CDS | 20.0% |
| !!! | AAGGATTTTATTACAAACAT+AGG | - | tig0025281:9130-9149 | None:intergenic | 20.0% |
| !!! | CCTCAAGTTTTTTTTTTTTT+TGG | - | tig0025281:9397-9416 | None:intergenic | 20.0% |
| !! | CCAAAAAAAAAAAAAACTTG+AGG | + | tig0025281:9394-9413 | Msa1421630:intron | 20.0% |
| !! | GATATGATTTATAGTAAGTT+TGG | + | tig0025281:9460-9479 | Msa1421630:intron | 20.0% |
| !! | TTCTAATATAGAAATCAAAG+AGG | + | tig0025281:9832-9851 | Msa1421630:intron | 20.0% |
| !! | AGAGGAATATTTATGTAAAT+AGG | + | tig0025281:10108-10127 | Msa1421630:intron | 20.0% |
| !!! | AAAAACCCAAATTTTGAATT+GGG | - | tig0025281:10310-10329 | None:intergenic | 20.0% |
| !!! | ATCGTGATTATTAGTTTATT+TGG | + | tig0025281:11144-11163 | Msa1421630:CDS | 20.0% |
| !! | AGAAAAAACATTAAAAGTGA+TGG | - | tig0025281:11553-11572 | None:intergenic | 20.0% |
| !! | AATACATTTAATTGCTTCAA+AGG | + | tig0025281:11977-11996 | Msa1421630:intron | 20.0% |
| !!! | TTTTAATAAGTACAGGAATA+GGG | + | tig0025281:12000-12019 | Msa1421630:intron | 20.0% |
| !!! | TTTTGACATTATGGTATATA+TGG | - | tig0025281:12403-12422 | None:intergenic | 20.0% |
| !!! | TTCAGGTTTAAGATTTTTGT+TGG | + | tig0025281:6759-6778 | Msa1421630:intron | 25.0% |
| ! | TATTACATTCAAAGAGTTGA+AGG | + | tig0025281:6810-6829 | Msa1421630:CDS | 25.0% |
| !! | GATATTTTGTTGATATGTAG+TGG | + | tig0025281:6841-6860 | Msa1421630:intron | 25.0% |
| ! | CTTCAATTAATCAAGCAATA+TGG | - | tig0025281:6911-6930 | None:intergenic | 25.0% |
| !!! | GGTTTGTTACTTTTTTTATG+AGG | + | tig0025281:6950-6969 | Msa1421630:intron | 25.0% |
| ! | TTCTGGGTTAAATAAATGTT+CGG | - | tig0025281:7009-7028 | None:intergenic | 25.0% |
| !!! | TGGAACATATTCATTTTTCT+GGG | - | tig0025281:7025-7044 | None:intergenic | 25.0% |
| !!! | TTGGAACATATTCATTTTTC+TGG | - | tig0025281:7026-7045 | None:intergenic | 25.0% |
| ! | AGAAAAATGAATATGTTCCA+AGG | + | tig0025281:7025-7044 | Msa1421630:intron | 25.0% |
| ! | GAAAAATGAATATGTTCCAA+GGG | + | tig0025281:7026-7045 | Msa1421630:intron | 25.0% |
| !! | AGTAAGTTGAATAAACTTGA+TGG | + | tig0025281:7364-7383 | Msa1421630:intron | 25.0% |
| !! | AGTAAGTTGAATAAACTTGA+TGG | + | tig0025281:7364-7383 | Msa1421630:intron | 25.0% |
| ! | TTAGAAGAAAACACAATCTA+TGG | + | tig0025281:7584-7603 | Msa1421630:intron | 25.0% |
| ! | CTACTTTGTTGACAAAAAAT+GGG | - | tig0025281:7716-7735 | None:intergenic | 25.0% |
| ! | TGAAAATAGAATGAAAATGG+AGG | - | tig0025281:7775-7794 | None:intergenic | 25.0% |
| ! | TGGTAATTCATAGTATTCAT+AGG | - | tig0025281:7864-7883 | None:intergenic | 25.0% |
| !!! | TTTCATTTTTCTACATCATG+AGG | - | tig0025281:8066-8085 | None:intergenic | 25.0% |
| ! | ATTCTATCTTCTTCACTATT+GGG | - | tig0025281:8161-8180 | None:intergenic | 25.0% |
| ! | TTTGTATGAGTTCAAATTCA+GGG | + | tig0025281:8221-8240 | Msa1421630:CDS | 25.0% |
| ! | AAGCTTACAATTGATGAAAT+TGG | + | tig0025281:8276-8295 | Msa1421630:CDS | 25.0% |
| ! | GAAGATGAAAATTTGATTCA+TGG | + | tig0025281:8384-8403 | Msa1421630:CDS | 25.0% |
| ! | ATGAAAATTTGATTCATGGT+GGG | + | tig0025281:8388-8407 | Msa1421630:CDS | 25.0% |
| ! | TTTATACGAGATATTTGAAG+AGG | + | tig0025281:8712-8731 | Msa1421630:CDS | 25.0% |
| ! | TTATACGAGATATTTGAAGA+GGG | + | tig0025281:8713-8732 | Msa1421630:CDS | 25.0% |
| !!! | TACAAGAGAAGATTTTTAGT+AGG | + | tig0025281:8776-8795 | Msa1421630:intron | 25.0% |
| ! | ACACTTCATATATTGTTATG+AGG | - | tig0025281:9075-9094 | None:intergenic | 25.0% |
| !! | ATTTTGTACAAGATAAGAGT+GGG | + | tig0025281:9267-9286 | Msa1421630:intron | 25.0% |
| ! | GTCAATAAATTCATCTTTGA+AGG | + | tig0025281:9566-9585 | Msa1421630:intron | 25.0% |
| ! | TACAGAAGTTGAAAGAATTA+GGG | - | tig0025281:9639-9658 | None:intergenic | 25.0% |
| ! | TAGAAAGATATCATATTCCA+TGG | - | tig0025281:9678-9697 | None:intergenic | 25.0% |
| !! | TTTTCTCATGTTACACAAAT+GGG | - | tig0025281:9900-9919 | None:intergenic | 25.0% |
| ! | CAATTTACAAGTAAACTGTT+AGG | + | tig0025281:10022-10041 | Msa1421630:intron | 25.0% |
| ! | ACTGTTAGGATATAGAATAA+AGG | + | tig0025281:10036-10055 | Msa1421630:intron | 25.0% |
| ! | CTGTTAGGATATAGAATAAA+GGG | + | tig0025281:10037-10056 | Msa1421630:intron | 25.0% |
| ! | TGTTAGGATATAGAATAAAG+GGG | + | tig0025281:10038-10057 | Msa1421630:intron | 25.0% |
| ! | TTAAGAGTAATTAGAGTAGT+TGG | + | tig0025281:10071-10090 | Msa1421630:intron | 25.0% |
| ! | GGAATATTTATGTAAATAGG+AGG | + | tig0025281:10111-10130 | Msa1421630:intron | 25.0% |
| !! | CAAAAACCCAAATTTTGAAT+TGG | - | tig0025281:10311-10330 | None:intergenic | 25.0% |
| ! | AAAGAATATTAAAGGATCGA+GGG | + | tig0025281:10402-10421 | Msa1421630:intron | 25.0% |
| ! | ATATTAAAAGTAGTTAGAGC+AGG | + | tig0025281:10474-10493 | Msa1421630:intron | 25.0% |
| !! | GAAAGGACTATTTTATTGAA+AGG | - | tig0025281:10671-10690 | None:intergenic | 25.0% |
| ! | AAAGTTAACGACTTTATGTT+AGG | - | tig0025281:10716-10735 | None:intergenic | 25.0% |
| ! | AATTCTATATGCATTTCTCA+AGG | + | tig0025281:10934-10953 | Msa1421630:intron | 25.0% |
| ! | AAGATATTGCAATAATGTTG+AGG | - | tig0025281:11089-11108 | None:intergenic | 25.0% |
| ! | ACATTATTGCAATATCTTAC+AGG | + | tig0025281:11091-11110 | Msa1421630:CDS | 25.0% |
| ! | CATTATTGCAATATCTTACA+GGG | + | tig0025281:11092-11111 | Msa1421630:CDS | 25.0% |
| ! | ACACCATTTCAAATGTTTAT+TGG | + | tig0025281:11294-11313 | Msa1421630:CDS | 25.0% |
| !! | TGATTTTACTTAAGATGTCA+TGG | - | tig0025281:11633-11652 | None:intergenic | 25.0% |
| ! | ACATGCATATCTATCTATTT+GGG | - | tig0025281:11740-11759 | None:intergenic | 25.0% |
| ! | TACATGCATATCTATCTATT+TGG | - | tig0025281:11741-11760 | None:intergenic | 25.0% |
| ! | TAAGAATTGTGATATCAATG+TGG | - | tig0025281:11856-11875 | None:intergenic | 25.0% |
| !! | TATCTCTATCTTTGTTTACT+AGG | - | tig0025281:11884-11903 | None:intergenic | 25.0% |
| ! | TAGTTTCAAAGTTTGTACAT+AGG | + | tig0025281:11919-11938 | Msa1421630:intron | 25.0% |
| !!! | TCAAAGGTTTTAATAAGTAC+AGG | + | tig0025281:11993-12012 | Msa1421630:intron | 25.0% |
| !!! | GTTTTAATAAGTACAGGAAT+AGG | + | tig0025281:11999-12018 | Msa1421630:intron | 25.0% |
| !! | TGTTCTCTTTTCTTTAATTC+TGG | + | tig0025281:12046-12065 | Msa1421630:intron | 25.0% |
| !! | TTACAAAGCTTTATACTGAA+GGG | - | tig0025281:12163-12182 | None:intergenic | 25.0% |
| !! | ATTACAAAGCTTTATACTGA+AGG | - | tig0025281:12164-12183 | None:intergenic | 25.0% |
| ! | TTACAACTATCCTTCTTTAT+TGG | + | tig0025281:12299-12318 | Msa1421630:CDS | 25.0% |
| !! | TTTGATAACAGTTTATTCCT+TGG | + | tig0025281:12514-12533 | Msa1421630:three_prime_UTR | 25.0% |
| !! | AGCAAGTTAAACGATAATTT+TGG | + | tig0025281:12910-12929 | Msa1421630:three_prime_UTR | 25.0% |
| !! | GCAAGTTAAACGATAATTTT+GGG | + | tig0025281:12911-12930 | Msa1421630:three_prime_UTR | 25.0% |
| CAATTAATCAAGCAATATGG+CGG | - | tig0025281:6908-6927 | None:intergenic | 30.0% | |
| AGAACATCGCAATTAATTGT+TGG | + | tig0025281:6929-6948 | Msa1421630:intron | 30.0% | |
| ATCATGTGTCATGTAGAATA+TGG | + | tig0025281:7217-7236 | Msa1421630:intron | 30.0% | |
| ACCTAGAACTAGAACTAATT+AGG | + | tig0025281:7341-7360 | Msa1421630:intron | 30.0% | |
| !! | TCCTAATTAGTTCTAGTTCT+AGG | - | tig0025281:7345-7364 | None:intergenic | 30.0% |
| ACCTAGAACTAGAACTAATT+AGG | + | tig0025281:7341-7360 | Msa1421630:intron | 30.0% | |
| !! | TCCTAATTAGTTCTAGTTCT+AGG | - | tig0025281:7345-7364 | None:intergenic | 30.0% |
| CCTACTTTGTTGACAAAAAA+TGG | - | tig0025281:7717-7736 | None:intergenic | 30.0% | |
| !!! | CCATTTTTTGTCAACAAAGT+AGG | + | tig0025281:7714-7733 | Msa1421630:CDS | 30.0% |
| TAAGGGGTTTAATTGGAATT+TGG | + | tig0025281:8096-8115 | Msa1421630:intron | 30.0% | |
| ! | AATTGGAATTTGGAACTACT+TGG | + | tig0025281:8106-8125 | Msa1421630:intron | 30.0% |
| GAACTACTTGGATTTGAAAA+AGG | + | tig0025281:8118-8137 | Msa1421630:intron | 30.0% | |
| GATTCTATCTTCTTCACTAT+TGG | - | tig0025281:8162-8181 | None:intergenic | 30.0% | |
| GTTTGTATGAGTTCAAATTC+AGG | + | tig0025281:8220-8239 | Msa1421630:CDS | 30.0% | |
| TGATGAAATTGGTATCTTGA+AGG | + | tig0025281:8287-8306 | Msa1421630:CDS | 30.0% | |
| ATCTTGAAGGAAGCTATAAA+CGG | + | tig0025281:8300-8319 | Msa1421630:CDS | 30.0% | |
| !! | ATCTTGATGATCTTCCATTT+TGG | + | tig0025281:8343-8362 | Msa1421630:CDS | 30.0% |
| !! | TCTTGATGATCTTCCATTTT+GGG | + | tig0025281:8344-8363 | Msa1421630:CDS | 30.0% |
| GATGAAAATTTGATTCATGG+TGG | + | tig0025281:8387-8406 | Msa1421630:CDS | 30.0% | |
| TGAAAATTTGATTCATGGTG+GGG | + | tig0025281:8389-8408 | Msa1421630:CDS | 30.0% | |
| CAAACTGAACATGTGTAAAA+AGG | - | tig0025281:8431-8450 | None:intergenic | 30.0% | |
| CAGTTTGATGTTCTTTACAA+CGG | + | tig0025281:8444-8463 | Msa1421630:CDS | 30.0% | |
| AGTTTGATGTTCTTTACAAC+GGG | + | tig0025281:8445-8464 | Msa1421630:CDS | 30.0% | |
| AATTCACTTATTCGGTTATC+TGG | + | tig0025281:8547-8566 | Msa1421630:CDS | 30.0% | |
| ATTACGGTTTGAGAATAGAA+TGG | + | tig0025281:8581-8600 | Msa1421630:CDS | 30.0% | |
| TTGTGTATCGTAAAGTTCAT+TGG | + | tig0025281:8631-8650 | Msa1421630:CDS | 30.0% | |
| CAAATATCTCGTATAAAGCA+GGG | - | tig0025281:8709-8728 | None:intergenic | 30.0% | |
| TCAAATATCTCGTATAAAGC+AGG | - | tig0025281:8710-8729 | None:intergenic | 30.0% | |
| ACAACAGCAAAAAATAAGGA+CGG | - | tig0025281:8925-8944 | None:intergenic | 30.0% | |
| !!! | TCCTTATTTTTTGCTGTTGT+GGG | + | tig0025281:8925-8944 | Msa1421630:CDS | 30.0% |
| AAAACTAGAGGCTGAATATT+TGG | - | tig0025281:9039-9058 | None:intergenic | 30.0% | |
| GTCTAGATTTAGATTGGTAA+AGG | - | tig0025281:9149-9168 | None:intergenic | 30.0% | |
| ! | TTGGTAGTCTAGATTTAGAT+TGG | - | tig0025281:9155-9174 | None:intergenic | 30.0% |
| !! | AAGAGAAAAAAGAGTACTTC+TGG | - | tig0025281:9191-9210 | None:intergenic | 30.0% |
| ! | GATTTTGTACAAGATAAGAG+TGG | + | tig0025281:9266-9285 | Msa1421630:intron | 30.0% |
| ! | GATTTTTGCATAAGGTGATT+CGG | + | tig0025281:9296-9315 | Msa1421630:intron | 30.0% |
| ! | ATTTTTGCATAAGGTGATTC+GGG | + | tig0025281:9297-9316 | Msa1421630:intron | 30.0% |
| AAGAGTAGCATAAATGTTAG+AGG | + | tig0025281:9361-9380 | Msa1421630:intron | 30.0% | |
| AAGCATTTACCTATTAGACA+GGG | - | tig0025281:9504-9523 | None:intergenic | 30.0% | |
| GTACAGAAGTTGAAAGAATT+AGG | - | tig0025281:9640-9659 | None:intergenic | 30.0% | |
| CAAACACAACATTTAGTCAA+GGG | - | tig0025281:9754-9773 | None:intergenic | 30.0% | |
| ACAAACACAACATTTAGTCA+AGG | - | tig0025281:9755-9774 | None:intergenic | 30.0% | |
| CATGCATTGTATGTGTTTAA+GGG | - | tig0025281:9801-9820 | None:intergenic | 30.0% | |
| ACATGCATTGTATGTGTTTA+AGG | - | tig0025281:9802-9821 | None:intergenic | 30.0% | |
| ! | CTTTTCTCATGTTACACAAA+TGG | - | tig0025281:9901-9920 | None:intergenic | 30.0% |
| TATGTAAATAGGAGGATACA+AGG | + | tig0025281:10119-10138 | Msa1421630:intron | 30.0% | |
| ! | GGATTTTACGTTCCTAATTT+GGG | + | tig0025281:10247-10266 | Msa1421630:intron | 30.0% |
| ! | GATTTTACGTTCCTAATTTG+GGG | + | tig0025281:10248-10267 | Msa1421630:intron | 30.0% |
| ATCTAGCCCAATTCAAAATT+TGG | + | tig0025281:10301-10320 | Msa1421630:intron | 30.0% | |
| TCTAGCCCAATTCAAAATTT+GGG | + | tig0025281:10302-10321 | Msa1421630:intron | 30.0% | |
| CGATCCTTTAATATTCTTTC+TGG | - | tig0025281:10401-10420 | None:intergenic | 30.0% | |
| GAAAGAATATTAAAGGATCG+AGG | + | tig0025281:10401-10420 | Msa1421630:intron | 30.0% | |
| ! | TAGAAAAGTGCATGTTAGTA+AGG | - | tig0025281:10752-10771 | None:intergenic | 30.0% |
| CCTCCAATAAACATTTGAAA+TGG | - | tig0025281:11300-11319 | None:intergenic | 30.0% | |
| CCATTTCAAATGTTTATTGG+AGG | + | tig0025281:11297-11316 | Msa1421630:CDS | 30.0% | |
| ! | AATTTTCATCCAATTACACC+AGG | + | tig0025281:11338-11357 | Msa1421630:CDS | 30.0% |
| TACAAAATATACACTCTTCC+TGG | + | tig0025281:11381-11400 | Msa1421630:CDS | 30.0% | |
| TCAAGTACACAATCAAAAGA+AGG | - | tig0025281:11588-11607 | None:intergenic | 30.0% | |
| TTAAGATGTCATGGCTATTA+AGG | - | tig0025281:11624-11643 | None:intergenic | 30.0% | |
| ! | CTATCTTTGTTTACTAGGAT+GGG | - | tig0025281:11879-11898 | None:intergenic | 30.0% |
| ! | TCTATCTTTGTTTACTAGGA+TGG | - | tig0025281:11880-11899 | None:intergenic | 30.0% |
| TTTCAAAGTTTGTACATAGG+AGG | + | tig0025281:11922-11941 | Msa1421630:intron | 30.0% | |
| TATGCTTTCTTCCTGATATT+TGG | + | tig0025281:12341-12360 | Msa1421630:CDS | 30.0% | |
| ATGATTGATACTCTTCTCTT+TGG | + | tig0025281:12473-12492 | Msa1421630:three_prime_UTR | 30.0% | |
| CAATTTGCAATCAAACATGT+TGG | - | tig0025281:12732-12751 | None:intergenic | 30.0% | |
| AGCAAAACCAAATTACACTT+TGG | - | tig0025281:12786-12805 | None:intergenic | 30.0% | |
| CTCACATTTAACTAACATCA+GGG | - | tig0025281:12849-12868 | None:intergenic | 30.0% | |
| ACTCACATTTAACTAACATC+AGG | - | tig0025281:12850-12869 | None:intergenic | 30.0% | |
| TTCAGTATGTAGCCTATTGT+CGG | + | tig0025281:7167-7186 | Msa1421630:intron | 35.0% | |
| AAGATTGTAGAGTGAAGAAG+AGG | - | tig0025281:7641-7660 | None:intergenic | 35.0% | |
| AACGTTGTAGATGTGATTTG+AGG | - | tig0025281:7682-7701 | None:intergenic | 35.0% | |
| TCAAATCACATCTACAACGT+TGG | + | tig0025281:7681-7700 | Msa1421630:CDS | 35.0% | |
| ACAATAACACTGACATGTGT+CGG | + | tig0025281:8006-8025 | Msa1421630:intron | 35.0% | |
| ! | TTTTTCTACATCATGAGGCA+CGG | - | tig0025281:8061-8080 | None:intergenic | 35.0% |
| GTGAAGAAGATAGAATCTCT+TGG | + | tig0025281:8165-8184 | Msa1421630:CDS | 35.0% | |
| !! | CTTGATGATCTTCCATTTTG+GGG | + | tig0025281:8345-8364 | Msa1421630:CDS | 35.0% |
| !! | TTGATGATCTTCCATTTTGG+GGG | + | tig0025281:8346-8365 | Msa1421630:CDS | 35.0% |
| GAAAATTTGATTCATGGTGG+GGG | + | tig0025281:8390-8409 | Msa1421630:CDS | 35.0% | |
| GTAGATATAACCAAGGATGT+TGG | + | tig0025281:8513-8532 | Msa1421630:CDS | 35.0% | |
| ATTCTCAAACCGTAATTCTG+TGG | - | tig0025281:8577-8596 | None:intergenic | 35.0% | |
| ! | CAAAAGCAAAATGATGACGA+AGG | - | tig0025281:8673-8692 | None:intergenic | 35.0% |
| ! | CTTCGTCATCATTTTGCTTT+TGG | + | tig0025281:8671-8690 | Msa1421630:CDS | 35.0% |
| TAGCGCAAATGAAGAAGATA+GGG | + | tig0025281:8849-8868 | Msa1421630:CDS | 35.0% | |
| CAACAGCAAAAAATAAGGAC+GGG | - | tig0025281:8924-8943 | None:intergenic | 35.0% | |
| !!! | GTCCTTATTTTTTGCTGTTG+TGG | + | tig0025281:8924-8943 | Msa1421630:CDS | 35.0% |
| TCCCACAACAGCAAAAAATA+AGG | - | tig0025281:8929-8948 | None:intergenic | 35.0% | |
| !!! | ATTTTTTGCTGTTGTGGGAA+TGG | + | tig0025281:8930-8949 | Msa1421630:CDS | 35.0% |
| !!! | TTTTTTGCTGTTGTGGGAAT+GGG | + | tig0025281:8931-8950 | Msa1421630:CDS | 35.0% |
| AGCTTACAAGATTAGCAGTT+GGG | - | tig0025281:8959-8978 | None:intergenic | 35.0% | |
| TAGCTTACAAGATTAGCAGT+TGG | - | tig0025281:8960-8979 | None:intergenic | 35.0% | |
| !!! | TTCAGCCTCTAGTTTTTACA+TGG | + | tig0025281:9043-9062 | Msa1421630:intron | 35.0% |
| CAATGCCATGTAAAAACTAG+AGG | - | tig0025281:9051-9070 | None:intergenic | 35.0% | |
| AGACTACCAAGTGATAGTAA+AGG | + | tig0025281:9165-9184 | Msa1421630:intron | 35.0% | |
| ! | CTCTTGATTTTTGCTTTCAC+TGG | + | tig0025281:9206-9225 | Msa1421630:intron | 35.0% |
| TTACCTATTAGACAGGGTAT+TGG | - | tig0025281:9498-9517 | None:intergenic | 35.0% | |
| ! | GAAGCATTTACCTATTAGAC+AGG | - | tig0025281:9505-9524 | None:intergenic | 35.0% |
| TTCTCACAAGTAACAAAGTC+TGG | - | tig0025281:9545-9564 | None:intergenic | 35.0% | |
| GAAGTTGAAAGAATTAGGGT+TGG | - | tig0025281:9635-9654 | None:intergenic | 35.0% | |
| !! | TTGTTTTTCTCATGTCCCTT+GGG | - | tig0025281:10005-10024 | None:intergenic | 35.0% |
| !! | ATTGTTTTTCTCATGTCCCT+TGG | - | tig0025281:10006-10025 | None:intergenic | 35.0% |
| GAGTAATTAGAGTAGTTGGT+TGG | + | tig0025281:10075-10094 | Msa1421630:intron | 35.0% | |
| ! | GGGATTTTACGTTCCTAATT+TGG | + | tig0025281:10246-10265 | Msa1421630:intron | 35.0% |
| GGGTCCAGAAAGAATATTAA+AGG | + | tig0025281:10394-10413 | Msa1421630:intron | 35.0% | |
| AATATTAAAGGATCGAGGGA+AGG | + | tig0025281:10406-10425 | Msa1421630:intron | 35.0% | |
| AAGGAAGATACAAGGATAGA+GGG | + | tig0025281:10434-10453 | Msa1421630:intron | 35.0% | |
| TTAAAAGTAGTTAGAGCAGG+TGG | + | tig0025281:10477-10496 | Msa1421630:intron | 35.0% | |
| ACAGGAATCTTTGCAGAAAT+AGG | + | tig0025281:10506-10525 | Msa1421630:intron | 35.0% | |
| ! | ACTAACATGCACTTTTCTAC+AGG | + | tig0025281:10753-10772 | Msa1421630:intron | 35.0% |
| CTTCTGTTCCTAGCAATTAT+CGG | + | tig0025281:10785-10804 | Msa1421630:CDS | 35.0% | |
| !!! | CTCTTTCATCTGTTTTTGCT+GGG | + | tig0025281:10864-10883 | Msa1421630:CDS | 35.0% |
| AGTCAAGACAGAGAAATAGT+TGG | - | tig0025281:10994-11013 | None:intergenic | 35.0% | |
| ATAGAGAATGCAACAAACAC+CGG | - | tig0025281:11066-11085 | None:intergenic | 35.0% | |
| !! | GAGTAATTGGATATCGGTTT+AGG | + | tig0025281:11199-11218 | Msa1421630:CDS | 35.0% |
| !!! | ATTGGAGGTTTTGTTCCTTT+TGG | + | tig0025281:11312-11331 | Msa1421630:CDS | 35.0% |
| TGGATGAAAATTGCACCAAA+AGG | - | tig0025281:11330-11349 | None:intergenic | 35.0% | |
| GACATATGTTCAACTATCTG+TGG | + | tig0025281:11464-11483 | Msa1421630:CDS | 35.0% | |
| ACAATCAAAAGAAGGAAGCT+AGG | - | tig0025281:11580-11599 | None:intergenic | 35.0% | |
| TATGCATGTAACTGATCTTG+TGG | + | tig0025281:11751-11770 | Msa1421630:intron | 35.0% | |
| ! | TGATCTTGTGGTTTTCTGTA+GGG | + | tig0025281:11763-11782 | Msa1421630:intron | 35.0% |
| AATGTGGATATTAAGCCATG+AGG | - | tig0025281:11840-11859 | None:intergenic | 35.0% | |
| !! | TCAACAGCCATTTTCATGTT+TGG | + | tig0025281:12233-12252 | Msa1421630:CDS | 35.0% |
| !! | GCCATTTTCATGTTTGGTTA+CGG | + | tig0025281:12239-12258 | Msa1421630:CDS | 35.0% |
| ACCGTAACCAAACATGAAAA+TGG | - | tig0025281:12243-12262 | None:intergenic | 35.0% | |
| TATGCAAGATCAAGAATGAG+CGG | + | tig0025281:12272-12291 | Msa1421630:CDS | 35.0% | |
| !! | CAAAGAAACTCTGAAACTGA+TGG | - | tig0025281:12369-12388 | None:intergenic | 35.0% |
| ! | CTCACTCTCTTTTGACATTA+TGG | - | tig0025281:12412-12431 | None:intergenic | 35.0% |
| TCTCAAGCACAAAGTAACAT+TGG | + | tig0025281:12441-12460 | Msa1421630:three_prime_UTR | 35.0% | |
| CTTGTTGAAGAATTCAACCA+AGG | - | tig0025281:12534-12553 | None:intergenic | 35.0% | |
| CTTGGTTGAATTCTTCAACA+AGG | + | tig0025281:12532-12551 | Msa1421630:three_prime_UTR | 35.0% | |
| !! | CCATGGATTTAGTCTTGATT+CGG | - | tig0025281:12596-12615 | None:intergenic | 35.0% |
| AGAAAGGAGTGGAATTATAG+AGG | + | tig0025281:12644-12663 | Msa1421630:three_prime_UTR | 35.0% | |
| GAAAGGAGTGGAATTATAGA+GGG | + | tig0025281:12645-12664 | Msa1421630:three_prime_UTR | 35.0% | |
| ! | AACCAAATTACACTTTGGAG+TGG | - | tig0025281:12781-12800 | None:intergenic | 35.0% |
| GACGAGAAGATATCATTGAC+AGG | + | tig0025281:6648-6667 | Msa1421630:CDS | 40.0% | |
| GTTGGAGTTGCTGCAAAAAA+TGG | + | tig0025281:6777-6796 | Msa1421630:CDS | 40.0% | |
| AAGAAGGAGAATGAGGTGAT+GGG | - | tig0025281:7616-7635 | None:intergenic | 40.0% | |
| !! | ATTTGAGGTTGATGCGGTAA+CGG | - | tig0025281:7667-7686 | None:intergenic | 40.0% |
| !! | GATGTGATTTGAGGTTGATG+CGG | - | tig0025281:7673-7692 | None:intergenic | 40.0% |
| GTGAAGAGAATTGTTGACCT+GGG | - | tig0025281:7753-7772 | None:intergenic | 40.0% | |
| GAATTACCATTCTGCAAACC+AGG | + | tig0025281:7875-7894 | Msa1421630:intron | 40.0% | |
| ATGATGAGATCTAACTGACC+TGG | - | tig0025281:7896-7915 | None:intergenic | 40.0% | |
| TCTCTTGGAGAAGTTCTCAA+TGG | + | tig0025281:8180-8199 | Msa1421630:CDS | 40.0% | |
| AATGGTGATCGTTTGAGCAA+TGG | + | tig0025281:8198-8217 | Msa1421630:CDS | 40.0% | |
| !! | GTCGTAGAAGTGAAAGCATT+TGG | + | tig0025281:8474-8493 | Msa1421630:CDS | 40.0% |
| GTTATATCTACAGCGCGATT+TGG | - | tig0025281:8504-8523 | None:intergenic | 40.0% | |
| AACATCAATGCCAACATCCT+TGG | - | tig0025281:8526-8545 | None:intergenic | 40.0% | |
| ! | TCTGGAATGCCACAGAATTA+CGG | + | tig0025281:8565-8584 | Msa1421630:CDS | 40.0% |
| CTAGCGCAAATGAAGAAGAT+AGG | + | tig0025281:8848-8867 | Msa1421630:CDS | 40.0% | |
| AATGAAGAAGATAGGGAGGT+TGG | + | tig0025281:8856-8875 | Msa1421630:CDS | 40.0% | |
| ! | TTCTGGCCTTTACTATCACT+TGG | - | tig0025281:9174-9193 | None:intergenic | 40.0% |
| ! | CACTGGTCTGTTCTTATGTA+TGG | + | tig0025281:9223-9242 | Msa1421630:intron | 40.0% |
| GTCTGTTCTTATGTATGGTG+TGG | + | tig0025281:9228-9247 | Msa1421630:intron | 40.0% | |
| TTGTACAAGATAAGAGTGGG+TGG | + | tig0025281:9270-9289 | Msa1421630:intron | 40.0% | |
| ! | GGTGGTAGGATTTTTGCATA+AGG | + | tig0025281:9288-9307 | Msa1421630:intron | 40.0% |
| !! | TTAGACAGGGTATTGGCTTA+TGG | - | tig0025281:9491-9510 | None:intergenic | 40.0% |
| AAGCCAATACCCTGTCTAAT+AGG | + | tig0025281:9492-9511 | Msa1421630:intron | 40.0% | |
| TATTCCATGGCAAAGATACC+AGG | - | tig0025281:9665-9684 | None:intergenic | 40.0% | |
| TGGGGGACATCTGATAAAAT+TGG | - | tig0025281:9986-10005 | None:intergenic | 40.0% | |
| ! | ATTTTATCAGATGTCCCCCA+AGG | + | tig0025281:9986-10005 | Msa1421630:intron | 40.0% |
| ! | TTTTATCAGATGTCCCCCAA+GGG | + | tig0025281:9987-10006 | Msa1421630:intron | 40.0% |
| ! | TGTTTTTCTCATGTCCCTTG+GGG | - | tig0025281:10004-10023 | None:intergenic | 40.0% |
| ! | AGAGTAGTTGGTTGGTTAGT+CGG | + | tig0025281:10083-10102 | Msa1421630:intron | 40.0% |
| ATGAACTTTGGCCCCAAATT+AGG | - | tig0025281:10262-10281 | None:intergenic | 40.0% | |
| ! | AATTTGGGGCCAAAGTTCAT+TGG | + | tig0025281:10262-10281 | Msa1421630:intron | 40.0% |
| ! | ATTTGGGGCCAAAGTTCATT+GGG | + | tig0025281:10263-10282 | Msa1421630:intron | 40.0% |
| ! | AATTGGGCTAGATGTACCTT+GGG | - | tig0025281:10294-10313 | None:intergenic | 40.0% |
| !! | AGGCATTGAAGGAAGATACA+AGG | + | tig0025281:10426-10445 | Msa1421630:intron | 40.0% |
| GAAGGAAGATACAAGGATAG+AGG | + | tig0025281:10433-10452 | Msa1421630:intron | 40.0% | |
| AAGATACAAGGATAGAGGGA+AGG | + | tig0025281:10438-10457 | Msa1421630:intron | 40.0% | |
| GGAATCTTTGCAGAAATAGG+AGG | + | tig0025281:10509-10528 | Msa1421630:intron | 40.0% | |
| TGCAGAAATAGGAGGATACA+AGG | + | tig0025281:10517-10536 | Msa1421630:intron | 40.0% | |
| ATAGGAGGATACAAGGATAG+AGG | + | tig0025281:10524-10543 | Msa1421630:intron | 40.0% | |
| TAGGAGGATACAAGGATAGA+GGG | + | tig0025281:10525-10544 | Msa1421630:intron | 40.0% | |
| CGATAATTGCTAGGAACAGA+AGG | - | tig0025281:10787-10806 | None:intergenic | 40.0% | |
| ACCATGACTGTATGGATAGA+GGG | - | tig0025281:10813-10832 | None:intergenic | 40.0% | |
| CAGATGAAAGAGCGAATAGA+AGG | - | tig0025281:10856-10875 | None:intergenic | 40.0% | |
| !!! | GCTCTTTCATCTGTTTTTGC+TGG | + | tig0025281:10863-10882 | Msa1421630:CDS | 40.0% |
| !! | CCAATTTGCTGAGAATGGAT+GGG | + | tig0025281:10910-10929 | Msa1421630:CDS | 40.0% |
| !! | AGAAGAGTGTTAGTCTAGCT+GGG | + | tig0025281:11025-11044 | Msa1421630:CDS | 40.0% |
| CTAGCTGGGATTCTTTACAT+TGG | + | tig0025281:11039-11058 | Msa1421630:CDS | 40.0% | |
| TGGGATTCTTTACATTGGTC+CGG | + | tig0025281:11044-11063 | Msa1421630:CDS | 40.0% | |
| TCACGATAATAGAGCCCAAT+GGG | - | tig0025281:11131-11150 | None:intergenic | 40.0% | |
| ATCACGATAATAGAGCCCAA+TGG | - | tig0025281:11132-11151 | None:intergenic | 40.0% | |
| TCGATCCCATTACTTGCATT+CGG | + | tig0025281:11174-11193 | Msa1421630:CDS | 40.0% | |
| GATATCTCTTTGTACCCAAG+GGG | - | tig0025281:11239-11258 | None:intergenic | 40.0% | |
| GGATATCTCTTTGTACCCAA+GGG | - | tig0025281:11240-11259 | None:intergenic | 40.0% | |
| GGAAGCTGTTGAATCTCTTT+CGG | - | tig0025281:11261-11280 | None:intergenic | 40.0% | |
| AAGAGATTCAACAGCTTCCT+TGG | + | tig0025281:11262-11281 | Msa1421630:CDS | 40.0% | |
| ! | ATACACTCTTCCTGGCATTT+TGG | + | tig0025281:11389-11408 | Msa1421630:CDS | 40.0% |
| ATTGTTGCGCTCGTAAATGT+TGG | + | tig0025281:11438-11457 | Msa1421630:CDS | 40.0% | |
| TATCTGTGGAAGACCATGAA+TGG | + | tig0025281:11478-11497 | Msa1421630:CDS | 40.0% | |
| GATGTCAGATACTACACTAG+AGG | - | tig0025281:11706-11725 | None:intergenic | 40.0% | |
| ! | CTGATCTTGTGGTTTTCTGT+AGG | + | tig0025281:11762-11781 | Msa1421630:intron | 40.0% |
| ! | GATCTTGTGGTTTTCTGTAG+GGG | + | tig0025281:11764-11783 | Msa1421630:intron | 40.0% |
| GAGGATGAATCAGATTACCA+GGG | - | tig0025281:11821-11840 | None:intergenic | 40.0% | |
| TGAGGATGAATCAGATTACC+AGG | - | tig0025281:11822-11841 | None:intergenic | 40.0% | |
| GGTAATCTGATTCATCCTCA+TGG | + | tig0025281:11822-11841 | Msa1421630:intron | 40.0% | |
| AACTGATGGCACCAAATATC+AGG | - | tig0025281:12355-12374 | None:intergenic | 40.0% | |
| CCGAATCAAGACTAAATCCA+TGG | + | tig0025281:12593-12612 | Msa1421630:three_prime_UTR | 40.0% | |
| CACAGTTTGGAAGAGCTTTA+CGG | + | tig0025281:12619-12638 | Msa1421630:three_prime_UTR | 40.0% | |
| ACAGTTTGGAAGAGCTTTAC+GGG | + | tig0025281:12620-12639 | Msa1421630:three_prime_UTR | 40.0% | |
| AGAGGGTAGGTTGTTAGAAT+TGG | + | tig0025281:12662-12681 | Msa1421630:three_prime_UTR | 40.0% | |
| GGTTGTTAGAATTGGAGATC+AGG | + | tig0025281:12670-12689 | Msa1421630:three_prime_UTR | 40.0% | |
| GACCACTCCAAAGTGTAATT+TGG | + | tig0025281:12776-12795 | Msa1421630:three_prime_UTR | 40.0% | |
| TCATCGTTTCCTTGAGACTG+CGG | - | tig0025281:6621-6640 | None:intergenic | 45.0% | |
| GGAGTTGCTGCAAAAAATGG+TGG | + | tig0025281:6780-6799 | Msa1421630:CDS | 45.0% | |
| TTCTACACTTTGTGTCCGTG+TGG | + | tig0025281:7133-7152 | Msa1421630:intron | 45.0% | |
| TGAACGATGTGCATACCACA+CGG | - | tig0025281:7151-7170 | None:intergenic | 45.0% | |
| AGAAGGAGAATGAGGTGATG+GGG | - | tig0025281:7615-7634 | None:intergenic | 45.0% | |
| GAAGAAGGAGAATGAGGTGA+TGG | - | tig0025281:7617-7636 | None:intergenic | 45.0% | |
| AGAGGAGAAGAAGGAGAATG+AGG | - | tig0025281:7623-7642 | None:intergenic | 45.0% | |
| GAGTGAAGAAGAGGAGAAGA+AGG | - | tig0025281:7632-7651 | None:intergenic | 45.0% | |
| TGTTGACCTGGGATTGTTGA+GGG | - | tig0025281:7742-7761 | None:intergenic | 45.0% | |
| TTGTTGACCTGGGATTGTTG+AGG | - | tig0025281:7743-7762 | None:intergenic | 45.0% | |
| GGTGAAGAGAATTGTTGACC+TGG | - | tig0025281:7754-7773 | None:intergenic | 45.0% | |
| ! | AACTGACCTGGTTTGCAGAA+TGG | - | tig0025281:7884-7903 | None:intergenic | 45.0% |
| GAAACACAACACTGACACAC+CGG | + | tig0025281:7920-7939 | Msa1421630:intron | 45.0% | |
| !! | CTTCCATTTTGGGGGTTTGT+TGG | + | tig0025281:8354-8373 | Msa1421630:CDS | 45.0% |
| TTGCCAACAAACCCCCAAAA+TGG | - | tig0025281:8360-8379 | None:intergenic | 45.0% | |
| ! | AATTTGATTCATGGTGGGGG+AGG | + | tig0025281:8393-8412 | Msa1421630:CDS | 45.0% |
| TCGCGCTGTAGATATAACCA+AGG | + | tig0025281:8506-8525 | Msa1421630:CDS | 45.0% | |
| CGCAAATGAAGAAGATAGGG+AGG | + | tig0025281:8852-8871 | Msa1421630:CDS | 45.0% | |
| ! | AAGAAGATAGGGAGGTTGGT+TGG | + | tig0025281:8860-8879 | Msa1421630:CDS | 45.0% |
| GTTGGTTGGAAGTCAATCCA+TGG | + | tig0025281:8874-8893 | Msa1421630:CDS | 45.0% | |
| GAGGCTTGAATACATCACCA+TGG | - | tig0025281:8894-8913 | None:intergenic | 45.0% | |
| GCAAAAAATAAGGACGGGTG+CGG | - | tig0025281:8919-8938 | None:intergenic | 45.0% | |
| ACAAGATAAGAGTGGGTGGT+AGG | + | tig0025281:9274-9293 | Msa1421630:intron | 45.0% | |
| CAAGTAACAAAGTCTGGCAC+TGG | - | tig0025281:9539-9558 | None:intergenic | 45.0% | |
| CTTTCAACTTCTGTACTGCC+TGG | + | tig0025281:9644-9663 | Msa1421630:intron | 45.0% | |
| TTATCATTGCCCCCTAGACA+AGG | - | tig0025281:9947-9966 | None:intergenic | 45.0% | |
| ! | GTTTTTCTCATGTCCCTTGG+GGG | - | tig0025281:10003-10022 | None:intergenic | 45.0% |
| ATAGGAGGATACAAGGACTG+AGG | + | tig0025281:10126-10145 | Msa1421630:intron | 45.0% | |
| TAGGAGGATACAAGGACTGA+GGG | + | tig0025281:10127-10146 | Msa1421630:intron | 45.0% | |
| AGCAGTGACTCTGTTGTAGA+AGG | + | tig0025281:10183-10202 | Msa1421630:intron | 45.0% | |
| GCAGTGACTCTGTTGTAGAA+GGG | + | tig0025281:10184-10203 | Msa1421630:intron | 45.0% | |
| CAGTGACTCTGTTGTAGAAG+GGG | + | tig0025281:10185-10204 | Msa1421630:intron | 45.0% | |
| GTTGTAGAAGGGGAAATCCT+TGG | + | tig0025281:10195-10214 | Msa1421630:intron | 45.0% | |
| ! | GAATTGGGCTAGATGTACCT+TGG | - | tig0025281:10295-10314 | None:intergenic | 45.0% |
| !! | AAGTGCTGTGGAAAAGTGCT+GGG | + | tig0025281:10334-10353 | Msa1421630:intron | 45.0% |
| !!! | GTGGAAAAGTGCTGGGTTTT+TGG | + | tig0025281:10341-10360 | Msa1421630:intron | 45.0% |
| ! | AGCAGAAAAGTGCAGATCGA+AGG | + | tig0025281:10371-10390 | Msa1421630:intron | 45.0% |
| ! | GCAGAAAAGTGCAGATCGAA+GGG | + | tig0025281:10372-10391 | Msa1421630:intron | 45.0% |
| ! | CAGAAAAGTGCAGATCGAAG+GGG | + | tig0025281:10373-10392 | Msa1421630:intron | 45.0% |
| ! | AGAAAAGTGCAGATCGAAGG+GGG | + | tig0025281:10374-10393 | Msa1421630:intron | 45.0% |
| ! | TAGAGCAGGTGGTTAGTTAC+AGG | + | tig0025281:10488-10507 | Msa1421630:intron | 45.0% |
| AGGATACAAGGATAGAGGGA+AGG | + | tig0025281:10529-10548 | Msa1421630:intron | 45.0% | |
| TGTAGAGGAGGAAACTCTTG+GGG | + | tig0025281:10597-10616 | Msa1421630:intron | 45.0% | |
| !! | AGAGGGTACCGATAATTGCT+AGG | - | tig0025281:10796-10815 | None:intergenic | 45.0% |
| ACCCTCTATCCATACAGTCA+TGG | + | tig0025281:10809-10828 | Msa1421630:CDS | 45.0% | |
| CACCATGACTGTATGGATAG+AGG | - | tig0025281:10814-10833 | None:intergenic | 45.0% | |
| CTCTATCCATACAGTCATGG+TGG | + | tig0025281:10812-10831 | Msa1421630:CDS | 45.0% | |
| GAATAGAAGGACAAGCCAAC+TGG | - | tig0025281:10843-10862 | None:intergenic | 45.0% | |
| TACTCAACAGCATCCTTCCA+TGG | + | tig0025281:10887-10906 | Msa1421630:CDS | 45.0% | |
| CATTCTCAGCAAATTGGCCA+TGG | - | tig0025281:10907-10926 | None:intergenic | 45.0% | |
| !! | CATGGCCAATTTGCTGAGAA+TGG | + | tig0025281:10905-10924 | Msa1421630:CDS | 45.0% |
| !! | GCCAATTTGCTGAGAATGGA+TGG | + | tig0025281:10909-10928 | Msa1421630:CDS | 45.0% |
| CCCATCCATTCTCAGCAAAT+TGG | - | tig0025281:10913-10932 | None:intergenic | 45.0% | |
| TCTGTCTTGACTATGACTCC+AGG | + | tig0025281:11002-11021 | Msa1421630:intron | 45.0% | |
| CTAGACTAACACTCTTCTCC+TGG | - | tig0025281:11023-11042 | None:intergenic | 45.0% | |
| !! | GAGAAGAGTGTTAGTCTAGC+TGG | + | tig0025281:11024-11043 | Msa1421630:CDS | 45.0% |
| ATATCTTACAGGGTCACAGC+TGG | + | tig0025281:11102-11121 | Msa1421630:CDS | 45.0% | |
| CGATCCCATTACTTGCATTC+GGG | + | tig0025281:11175-11194 | Msa1421630:CDS | 45.0% | |
| GATCCCATTACTTGCATTCG+GGG | + | tig0025281:11176-11195 | Msa1421630:CDS | 45.0% | |
| ATCCCATTACTTGCATTCGG+GGG | + | tig0025281:11177-11196 | Msa1421630:CDS | 45.0% | |
| TCGGGGGAGTAATTGGATAT+CGG | + | tig0025281:11193-11212 | Msa1421630:CDS | 45.0% | |
| TCGGTTTAGGTCCAAGTTTC+AGG | + | tig0025281:11212-11231 | Msa1421630:CDS | 45.0% | |
| CGGATATCTCTTTGTACCCA+AGG | - | tig0025281:11241-11260 | None:intergenic | 45.0% | |
| TTCAACAGCTTCCTTGGTAC+AGG | + | tig0025281:11268-11287 | Msa1421630:CDS | 45.0% | |
| AATGGTGTTCTCCTGTACCA+AGG | - | tig0025281:11282-11301 | None:intergenic | 45.0% | |
| TAGCGTACACCTGGTGTAAT+TGG | - | tig0025281:11350-11369 | None:intergenic | 45.0% | |
| GAGCGCAACAATCACAATGA+CGG | - | tig0025281:11430-11449 | None:intergenic | 45.0% | |
| TACTTCTCCTGAGATCAGGA+GGG | - | tig0025281:11796-11815 | None:intergenic | 45.0% | |
| TTACTTCTCCTGAGATCAGG+AGG | - | tig0025281:11797-11816 | None:intergenic | 45.0% | |
| GAAAAGAGAACACAGTGCAG+AGG | - | tig0025281:12038-12057 | None:intergenic | 45.0% | |
| CGCACTGTAGCCAATAAAGA+AGG | - | tig0025281:12312-12331 | None:intergenic | 45.0% | |
| AAATCCATGGCTGCACAGTT+TGG | + | tig0025281:12606-12625 | Msa1421630:three_prime_UTR | 45.0% | |
| GAAGAGCTTTACGGGAAGAA+AGG | + | tig0025281:12628-12647 | Msa1421630:three_prime_UTR | 45.0% | |
| GGAGTGGAATTATAGAGGGT+AGG | + | tig0025281:12649-12668 | Msa1421630:three_prime_UTR | 45.0% | |
| GGTGAATTAATTAAGCCCCC+TGG | + | tig0025281:12691-12710 | Msa1421630:three_prime_UTR | 45.0% | |
| CAACCTCATAAACAACCAGG+GGG | - | tig0025281:12709-12728 | None:intergenic | 45.0% | |
| GCAACCTCATAAACAACCAG+GGG | - | tig0025281:12710-12729 | None:intergenic | 45.0% | |
| GGCAACCTCATAAACAACCA+GGG | - | tig0025281:12711-12730 | None:intergenic | 45.0% | |
| TGGCAACCTCATAAACAACC+AGG | - | tig0025281:12712-12731 | None:intergenic | 45.0% | |
| GGTCATTAGACACACGATTG+AGG | - | tig0025281:12760-12779 | None:intergenic | 45.0% | |
| !! | TTAATATTAGTATTAATTAT+TGG | + | tig0025281:6692-6711 | Msa1421630:intron | 5.0% |
| TTTCCTTGAGACTGCGGTGT+CGG | - | tig0025281:6615-6634 | None:intergenic | 50.0% | |
| GCAGTCTCAAGGAAACGATG+AGG | + | tig0025281:6620-6639 | Msa1421630:CDS | 50.0% | |
| TGTGAGCTACAGCCGACAAT+AGG | - | tig0025281:7182-7201 | None:intergenic | 50.0% | |
| GTTGACCTGGGATTGTTGAG+GGG | - | tig0025281:7741-7760 | None:intergenic | 50.0% | |
| AAAAATAAGGACGGGTGCGG+AGG | - | tig0025281:8916-8935 | None:intergenic | 50.0% | |
| ACTGCCTGGTATCTTTGCCA+TGG | + | tig0025281:9658-9677 | Msa1421630:intron | 50.0% | |
| GACAAGGACGACACGCAATT+GGG | - | tig0025281:9931-9950 | None:intergenic | 50.0% | |
| AGACAAGGACGACACGCAAT+TGG | - | tig0025281:9932-9951 | None:intergenic | 50.0% | |
| ATTGCGTGTCGTCCTTGTCT+AGG | + | tig0025281:9932-9951 | Msa1421630:intron | 50.0% | |
| TTGCGTGTCGTCCTTGTCTA+GGG | + | tig0025281:9933-9952 | Msa1421630:intron | 50.0% | |
| ! | TTGGTTGGTTAGTCGGTCAG+AGG | + | tig0025281:10090-10109 | Msa1421630:intron | 50.0% |
| GAAGGGGAAATCCTTGGAGT+TGG | + | tig0025281:10201-10220 | Msa1421630:intron | 50.0% | |
| !! | TCCTTGGAGTTGGTATCTGC+TGG | + | tig0025281:10211-10230 | Msa1421630:intron | 50.0% |
| TCCAGCAGATACCAACTCCA+AGG | - | tig0025281:10215-10234 | None:intergenic | 50.0% | |
| ATCTGCTGGAGTCGAGAACA+AGG | + | tig0025281:10225-10244 | Msa1421630:intron | 50.0% | |
| TCTGCTGGAGTCGAGAACAA+GGG | + | tig0025281:10226-10245 | Msa1421630:intron | 50.0% | |
| GGGTTAGGCCCAATGAACTT+TGG | - | tig0025281:10274-10293 | None:intergenic | 50.0% | |
| AGTTCATTGGGCCTAACCCA+AGG | + | tig0025281:10275-10294 | Msa1421630:intron | 50.0% | |
| GGCTAGATGTACCTTGGGTT+AGG | - | tig0025281:10289-10308 | None:intergenic | 50.0% | |
| !! | GGGTTTTTGCTCAAGTGCTG+TGG | + | tig0025281:10322-10341 | Msa1421630:intron | 50.0% |
| ! | CAAGTGCTGTGGAAAAGTGC+TGG | + | tig0025281:10333-10352 | Msa1421630:intron | 50.0% |
| GAGAGTCCACCATGACTGTA+TGG | - | tig0025281:10821-10840 | None:intergenic | 50.0% | |
| CTCAGCAAATTGGCCATGGA+AGG | - | tig0025281:10903-10922 | None:intergenic | 50.0% | |
| CTCCCCCGAATGCAAGTAAT+GGG | - | tig0025281:11182-11201 | None:intergenic | 50.0% | |
| ACTCCCCCGAATGCAAGTAA+TGG | - | tig0025281:11183-11202 | None:intergenic | 50.0% | |
| CTTGCATTCGGGGGAGTAAT+TGG | + | tig0025281:11186-11205 | Msa1421630:CDS | 50.0% | |
| ! | TCCAAGTTTCAGGTCCCCTT+GGG | + | tig0025281:11222-11241 | Msa1421630:CDS | 50.0% |
| ! | ACCAGGTGTACGCTAGTTTG+TGG | + | tig0025281:11355-11374 | Msa1421630:CDS | 50.0% |
| ! | CCAGGTGTACGCTAGTTTGT+GGG | + | tig0025281:11356-11375 | Msa1421630:CDS | 50.0% |
| ! | CAGGTGTACGCTAGTTTGTG+GGG | + | tig0025281:11357-11376 | Msa1421630:CDS | 50.0% |
| CTGTGGAAGACCATGAATGG+TGG | + | tig0025281:11481-11500 | Msa1421630:CDS | 50.0% | |
| TGGAAGACCATGAATGGTGG+TGG | + | tig0025281:11484-11503 | Msa1421630:CDS | 50.0% | |
| !! | AAGACCATGAATGGTGGTGG+AGG | + | tig0025281:11487-11506 | Msa1421630:CDS | 50.0% |
| CATACCTCCACCACCATTCA+TGG | - | tig0025281:11494-11513 | None:intergenic | 50.0% | |
| GTCTTAACCCTCCTGATCTC+AGG | + | tig0025281:11786-11805 | Msa1421630:intron | 50.0% | |
| GGCTTACTTCTCCTGAGATC+AGG | - | tig0025281:11800-11819 | None:intergenic | 50.0% | |
| ATCTCAGGAGAAGTAAGCCC+TGG | + | tig0025281:11801-11820 | Msa1421630:intron | 50.0% | |
| ACACAGTGCAGAGGTCAACA+AGG | - | tig0025281:12029-12048 | None:intergenic | 50.0% | |
| TCTTCCAAACTGTGCAGCCA+TGG | - | tig0025281:12613-12632 | None:intergenic | 50.0% | |
| GCTTTACGGGAAGAAAGGAG+TGG | + | tig0025281:12633-12652 | Msa1421630:three_prime_UTR | 50.0% | |
| AAGCCCCCTGGTTGTTTATG+AGG | + | tig0025281:12703-12722 | Msa1421630:three_prime_UTR | 50.0% | |
| TAGGTCCCCTCAACAATCCC+AGG | + | tig0025281:7733-7752 | Msa1421630:CDS | 55.0% | |
| TGCGTGTCGTCCTTGTCTAG+GGG | + | tig0025281:9934-9953 | Msa1421630:intron | 55.0% | |
| !! | GGATCGAGGGAAGGCATTGA+AGG | + | tig0025281:10415-10434 | Msa1421630:intron | 55.0% |
| GAGGAGGAAACTCTTGGGGT+TGG | + | tig0025281:10601-10620 | Msa1421630:intron | 55.0% | |
| GAGGAAACTCTTGGGGTTGG+AGG | + | tig0025281:10604-10623 | Msa1421630:intron | 55.0% | |
| !! | GTCATGGTGGACTCTCCAGT+TGG | + | tig0025281:10825-10844 | Msa1421630:CDS | 55.0% |
| GTCACAGCTGGACTCCCATT+GGG | + | tig0025281:11114-11133 | Msa1421630:CDS | 55.0% | |
| ! | GTCCAAGTTTCAGGTCCCCT+TGG | + | tig0025281:11221-11240 | Msa1421630:CDS | 55.0% |
| ACCCAAGGGGACCTGAAACT+TGG | - | tig0025281:11226-11245 | None:intergenic | 55.0% | |
| CCCACAAACTAGCGTACACC+TGG | - | tig0025281:11359-11378 | None:intergenic | 55.0% | |
| AGTGTCGCAGCCAAAATGCC+AGG | - | tig0025281:11402-11421 | None:intergenic | 55.0% | |
| GTGTGCAGATCTGTGCTGTG+TGG | + | tig0025281:12206-12225 | Msa1421630:intron | 55.0% | |
| TGCAGATCTGTGCTGTGTGG+TGG | + | tig0025281:12209-12228 | Msa1421630:intron | 55.0% | |
| GGGTGGAAAACGGTCGACAC+TGG | - | tig0025281:7255-7274 | None:intergenic | 60.0% | |
| TGCGTCGCACGGGTGGAAAA+CGG | - | tig0025281:7265-7284 | None:intergenic | 60.0% | |
| ! | TTTTCCACCCGTGCGACGCA+CGG | + | tig0025281:7265-7284 | Msa1421630:intron | 60.0% |
| AATAAGGACGGGTGCGGAGG+AGG | - | tig0025281:8913-8932 | None:intergenic | 60.0% | |
| GCGTGTCGTCCTTGTCTAGG+GGG | + | tig0025281:9935-9954 | Msa1421630:intron | 60.0% | |
| GGTCACAGCTGGACTCCCAT+TGG | + | tig0025281:11113-11132 | Msa1421630:CDS | 60.0% | |
| ! | AGACTGCGGTGTCGGAGGAG+AGG | - | tig0025281:6607-6626 | None:intergenic | 65.0% |
| ! | CCTTGAGACTGCGGTGTCGG+AGG | - | tig0025281:6612-6631 | None:intergenic | 65.0% |
| CCTCCGACACCGCAGTCTCA+AGG | + | tig0025281:6609-6628 | Msa1421630:CDS | 65.0% | |
| TTTCCACCCGTGCGACGCAC+GGG | + | tig0025281:7266-7285 | Msa1421630:intron | 65.0% | |
| TGTGCTGCCCGTGCGTCGCA+CGG | - | tig0025281:7276-7295 | None:intergenic | 70.0% | |
| GTGCTGCCCGTGCGTCGCAC+GGG | - | tig0025281:7275-7294 | None:intergenic | 75.0% | |
| ! | CTGCCCGTGCGTCGCACGGG+TGG | - | tig0025281:7272-7291 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025281 | gene | 6597 | 12951 | 6597 | ID=Msa1421630;Name=Msa1421630 |
| tig0025281 | mRNA | 6597 | 12951 | 6597 | ID=Msa1421630-mRNA-1;Parent=Msa1421630;Name=Msa1421630-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.57|0.5|0.75|0.85|0.87|8|521|633 |
| tig0025281 | exon | 6597 | 6669 | 6597 | ID=Msa1421630-mRNA-1:exon:2183;Parent=Msa1421630-mRNA-1 |
| tig0025281 | exon | 6764 | 6831 | 6764 | ID=Msa1421630-mRNA-1:exon:2184;Parent=Msa1421630-mRNA-1 |
| tig0025281 | exon | 7588 | 7754 | 7588 | ID=Msa1421630-mRNA-1:exon:2185;Parent=Msa1421630-mRNA-1 |
| tig0025281 | exon | 8140 | 8745 | 8140 | ID=Msa1421630-mRNA-1:exon:2186;Parent=Msa1421630-mRNA-1 |
| tig0025281 | exon | 8843 | 8971 | 8843 | ID=Msa1421630-mRNA-1:exon:2187;Parent=Msa1421630-mRNA-1 |
| tig0025281 | exon | 10775 | 10931 | 10775 | ID=Msa1421630-mRNA-1:exon:2188;Parent=Msa1421630-mRNA-1 |
| tig0025281 | exon | 11024 | 11508 | 11024 | ID=Msa1421630-mRNA-1:exon:2189;Parent=Msa1421630-mRNA-1 |
| tig0025281 | exon | 12214 | 12951 | 12214 | ID=Msa1421630-mRNA-1:exon:2190;Parent=Msa1421630-mRNA-1 |
| tig0025281 | CDS | 6597 | 6669 | 6597 | ID=Msa1421630-mRNA-1:cds;Parent=Msa1421630-mRNA-1 |
| tig0025281 | CDS | 6764 | 6831 | 6764 | ID=Msa1421630-mRNA-1:cds;Parent=Msa1421630-mRNA-1 |
| tig0025281 | CDS | 7588 | 7754 | 7588 | ID=Msa1421630-mRNA-1:cds;Parent=Msa1421630-mRNA-1 |
| tig0025281 | CDS | 8140 | 8745 | 8140 | ID=Msa1421630-mRNA-1:cds;Parent=Msa1421630-mRNA-1 |
| tig0025281 | CDS | 8843 | 8971 | 8843 | ID=Msa1421630-mRNA-1:cds;Parent=Msa1421630-mRNA-1 |
| tig0025281 | CDS | 10775 | 10931 | 10775 | ID=Msa1421630-mRNA-1:cds;Parent=Msa1421630-mRNA-1 |
| tig0025281 | CDS | 11024 | 11508 | 11024 | ID=Msa1421630-mRNA-1:cds;Parent=Msa1421630-mRNA-1 |
| tig0025281 | CDS | 12214 | 12430 | 12214 | ID=Msa1421630-mRNA-1:cds;Parent=Msa1421630-mRNA-1 |
| tig0025281 | three_prime_UTR | 12431 | 12951 | 12431 | ID=Msa1421630-mRNA-1:three_prime_utr;Parent=Msa1421630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
