Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012790 | XP_013447912.1 | 90.231 | 389 | 1 | 1 | 1 | 352 | 1 | 389 | 0.0 | 710 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012790 | sp|Q9LSD6|ARP2_ARATH | 84.576 | 389 | 23 | 1 | 1 | 352 | 1 | 389 | 0.0 | 670 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012790 | A0A072TWS4 | 90.231 | 389 | 1 | 1 | 1 | 352 | 1 | 389 | 0.0 | 710 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003700 | Msa1012790 | 0.810221 | 1.283703e-50 | -8.615850e-47 |
| Msa0094120 | Msa1012790 | 0.815931 | 7.178922e-52 | -8.615850e-47 |
| Msa0112790 | Msa1012790 | 0.801940 | 7.103931e-49 | -8.615850e-47 |
| Msa0657580 | Msa1012790 | 0.808783 | 2.614335e-50 | -8.615850e-47 |
| Msa0669520 | Msa1012790 | 0.817811 | 2.717401e-52 | -8.615850e-47 |
| Msa0713820 | Msa1012790 | 0.820419 | 6.927956e-53 | -8.615850e-47 |
| Msa0729720 | Msa1012790 | 0.808046 | 3.753750e-50 | -8.615850e-47 |
| Msa0756060 | Msa1012790 | 0.820282 | 7.448763e-53 | -8.615850e-47 |
| Msa0821760 | Msa1012790 | 0.804846 | 1.775805e-49 | -8.615850e-47 |
| Msa0144300 | Msa1012790 | 0.826544 | 2.560074e-54 | -8.615850e-47 |
| Msa0195630 | Msa1012790 | 0.828732 | 7.634689e-55 | -8.615850e-47 |
| Msa0195980 | Msa1012790 | 0.817648 | 2.956969e-52 | -8.615850e-47 |
| Msa0225740 | Msa1012790 | 0.823652 | 1.234617e-53 | -8.615850e-47 |
| Msa0237410 | Msa1012790 | 0.824117 | 9.603701e-54 | -8.615850e-47 |
| Msa0376300 | Msa1012790 | 0.800002 | 1.767794e-48 | -8.615850e-47 |
| Msa0376310 | Msa1012790 | 0.803557 | 3.292753e-49 | -8.615850e-47 |
| Msa0405570 | Msa1012790 | 0.809661 | 1.694455e-50 | -8.615850e-47 |
| Msa0475790 | Msa1012790 | 0.808354 | 3.226741e-50 | -8.615850e-47 |
| Msa1012720 | Msa1012790 | 0.906174 | 1.965852e-80 | -8.615850e-47 |
| Msa1012790 | Msa1040400 | 0.811547 | 6.629542e-51 | -8.615850e-47 |
| Msa1012790 | Msa1074810 | 0.810192 | 1.302297e-50 | -8.615850e-47 |
| Msa1012790 | Msa1115770 | 0.802987 | 4.321557e-49 | -8.615850e-47 |
| Msa1012790 | Msa1124110 | 0.823191 | 1.582144e-53 | -8.615850e-47 |
| Msa1012790 | Msa1126510 | 0.807882 | 4.067131e-50 | -8.615850e-47 |
| Msa1012790 | Msa1134110 | 0.807865 | 4.102448e-50 | -8.615850e-47 |
| Msa1012790 | Msa1147970 | 0.806418 | 8.306911e-50 | -8.615850e-47 |
| Msa1012790 | Msa1165870 | 0.811716 | 6.090620e-51 | -8.615850e-47 |
| Msa1012790 | Msa1166860 | 0.800027 | 1.747079e-48 | -8.615850e-47 |
| Msa1012790 | Msa1168950 | 0.807569 | 4.741023e-50 | -8.615850e-47 |
| Msa1012790 | Msa1189070 | 0.802958 | 4.382446e-49 | -8.615850e-47 |
| Msa1012790 | Msa1207270 | 0.801590 | 8.382381e-49 | -8.615850e-47 |
| Msa1012790 | Msa1284550 | 0.815966 | 7.049212e-52 | -8.615850e-47 |
| Msa1012790 | Msa1321630 | 0.801044 | 1.084168e-48 | -8.615850e-47 |
| Msa1012790 | Msa1367590 | 0.821304 | 4.334428e-53 | -8.615850e-47 |
| Msa1012790 | Msa1375560 | 0.808359 | 3.219975e-50 | -8.615850e-47 |
| Msa1012790 | Msa1394500 | 0.814797 | 1.282919e-51 | -8.615850e-47 |
| Msa1012790 | Msa1422580 | 0.831093 | 2.029337e-55 | -8.615850e-47 |
| Msa0523270 | Msa1012790 | 0.801954 | 7.056718e-49 | -8.615850e-47 |
| Msa0552810 | Msa1012790 | 0.801334 | 9.458744e-49 | -8.615850e-47 |
| Msa0898670 | Msa1012790 | 0.801715 | 7.898359e-49 | -8.615850e-47 |
| Msa0924470 | Msa1012790 | 0.800542 | 1.372604e-48 | -8.615850e-47 |
| Msa0925440 | Msa1012790 | 0.814673 | 1.366456e-51 | -8.615850e-47 |
| Msa0963270 | Msa1012790 | 0.803690 | 3.091142e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012790 | MtrunA17_Chr7g0224401 | 90.231 | 389 | 1 | 1 | 1 | 352 | 1 | 389 | 0.0 | 710 |
| Msa1012790 | MtrunA17_Chr2g0278591 | 42.398 | 342 | 185 | 2 | 7 | 348 | 45 | 374 | 2.25e-106 | 316 |
| Msa1012790 | MtrunA17_Chr3g0129641 | 42.105 | 342 | 186 | 2 | 7 | 348 | 45 | 374 | 2.74e-104 | 311 |
| Msa1012790 | MtrunA17_Chr7g0258721 | 42.105 | 342 | 186 | 2 | 7 | 348 | 45 | 374 | 1.04e-103 | 310 |
| Msa1012790 | MtrunA17_Chr7g0223901 | 41.520 | 342 | 188 | 2 | 7 | 348 | 45 | 374 | 1.43e-103 | 309 |
| Msa1012790 | MtrunA17_Chr6g0448881 | 40.936 | 342 | 190 | 2 | 7 | 348 | 45 | 374 | 2.38e-103 | 308 |
| Msa1012790 | MtrunA17_Chr1g0175391 | 41.520 | 342 | 188 | 2 | 7 | 348 | 45 | 374 | 4.38e-103 | 308 |
| Msa1012790 | MtrunA17_Chr2g0328091 | 40.643 | 342 | 191 | 2 | 7 | 348 | 45 | 374 | 6.76e-102 | 305 |
| Msa1012790 | MtrunA17_Chr8g0381261 | 33.134 | 335 | 200 | 8 | 30 | 344 | 86 | 416 | 1.29e-53 | 182 |
| Msa1012790 | MtrunA17_Chr8g0361001 | 29.315 | 365 | 204 | 6 | 26 | 348 | 89 | 441 | 2.08e-47 | 166 |
| Msa1012790 | MtrunA17_Chr5g0427591 | 29.315 | 365 | 204 | 6 | 26 | 348 | 89 | 441 | 6.30e-47 | 165 |
| Msa1012790 | MtrunA17_Chr3g0089031 | 28.818 | 347 | 212 | 8 | 10 | 348 | 41 | 360 | 2.01e-41 | 148 |
| Msa1012790 | MtrunA17_Chr2g0305361 | 25.393 | 382 | 202 | 10 | 31 | 349 | 71 | 432 | 2.26e-30 | 120 |
| Msa1012790 | MtrunA17_Chr3g0080021 | 26.351 | 296 | 178 | 11 | 55 | 332 | 181 | 454 | 7.81e-22 | 96.3 |
| Msa1012790 | MtrunA17_Chr8g0369101 | 27.184 | 309 | 178 | 14 | 55 | 342 | 189 | 471 | 7.13e-21 | 93.6 |
| Msa1012790 | MtrunA17_Chr8g0336071 | 39.175 | 97 | 59 | 0 | 67 | 163 | 1 | 97 | 1.19e-15 | 72.0 |
| Msa1012790 | MtrunA17_Chr8g0336061 | 34.694 | 98 | 51 | 1 | 197 | 281 | 6 | 103 | 3.10e-13 | 65.5 |
| Msa1012790 | MtrunA17_Chr3g0111971 | 32.026 | 153 | 95 | 3 | 64 | 207 | 116 | 268 | 9.89e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012790 | AT3G27000.1 | 84.576 | 389 | 23 | 1 | 1 | 352 | 1 | 389 | 0.0 | 670 |
| Msa1012790 | AT2G42100.1 | 40.052 | 382 | 182 | 3 | 2 | 348 | 6 | 375 | 1.35e-104 | 312 |
| Msa1012790 | AT3G53750.1 | 42.398 | 342 | 185 | 2 | 7 | 348 | 45 | 374 | 1.42e-104 | 312 |
| Msa1012790 | AT3G53750.2 | 42.398 | 342 | 185 | 2 | 7 | 348 | 45 | 374 | 1.42e-104 | 312 |
| Msa1012790 | AT2G37620.1 | 42.398 | 342 | 185 | 2 | 7 | 348 | 45 | 374 | 1.42e-104 | 312 |
| Msa1012790 | AT2G37620.3 | 42.398 | 342 | 185 | 2 | 7 | 348 | 45 | 374 | 1.42e-104 | 312 |
| Msa1012790 | AT2G37620.2 | 42.398 | 342 | 185 | 2 | 7 | 348 | 45 | 374 | 1.42e-104 | 312 |
| Msa1012790 | AT2G37620.4 | 42.398 | 342 | 185 | 2 | 7 | 348 | 45 | 374 | 1.42e-104 | 312 |
| Msa1012790 | AT5G09810.1 | 42.398 | 342 | 185 | 2 | 7 | 348 | 45 | 374 | 1.69e-104 | 312 |
| Msa1012790 | AT3G12110.1 | 41.813 | 342 | 187 | 2 | 7 | 348 | 45 | 374 | 1.18e-103 | 310 |
| Msa1012790 | AT1G49240.1 | 41.617 | 334 | 183 | 2 | 15 | 348 | 53 | 374 | 2.30e-101 | 304 |
| Msa1012790 | AT3G18780.2 | 41.617 | 334 | 183 | 2 | 15 | 348 | 53 | 374 | 2.65e-101 | 304 |
| Msa1012790 | AT3G18780.3 | 41.617 | 334 | 183 | 2 | 15 | 348 | 53 | 374 | 2.65e-101 | 304 |
| Msa1012790 | AT3G46520.2 | 40.936 | 342 | 190 | 2 | 7 | 348 | 45 | 374 | 3.54e-100 | 301 |
| Msa1012790 | AT3G46520.1 | 40.936 | 342 | 190 | 2 | 7 | 348 | 45 | 374 | 3.54e-100 | 301 |
| Msa1012790 | AT5G59370.2 | 40.643 | 342 | 191 | 2 | 7 | 348 | 45 | 374 | 1.12e-99 | 300 |
| Msa1012790 | AT5G59370.1 | 40.643 | 342 | 191 | 2 | 7 | 348 | 45 | 374 | 1.12e-99 | 300 |
| Msa1012790 | AT3G18780.1 | 42.903 | 310 | 166 | 1 | 15 | 324 | 53 | 351 | 2.43e-98 | 296 |
| Msa1012790 | AT2G42170.1 | 39.881 | 336 | 186 | 4 | 15 | 349 | 8 | 328 | 5.37e-93 | 281 |
| Msa1012790 | AT2G42170.3 | 39.881 | 336 | 186 | 4 | 15 | 349 | 8 | 328 | 5.37e-93 | 281 |
| Msa1012790 | AT2G42170.4 | 40.968 | 310 | 169 | 2 | 15 | 324 | 8 | 303 | 9.46e-90 | 272 |
| Msa1012790 | AT2G42170.2 | 40.968 | 310 | 169 | 2 | 15 | 324 | 8 | 303 | 9.46e-90 | 272 |
| Msa1012790 | AT2G42090.1 | 36.858 | 331 | 197 | 2 | 18 | 348 | 45 | 363 | 5.83e-83 | 256 |
| Msa1012790 | AT2G42170.5 | 38.750 | 240 | 131 | 4 | 111 | 349 | 6 | 230 | 6.45e-57 | 185 |
| Msa1012790 | AT1G13180.1 | 31.339 | 351 | 215 | 8 | 14 | 344 | 71 | 415 | 1.42e-53 | 182 |
| Msa1012790 | AT1G18450.1 | 28.150 | 373 | 198 | 7 | 26 | 348 | 86 | 438 | 7.27e-48 | 167 |
| Msa1012790 | AT3G60830.1 | 28.483 | 323 | 204 | 6 | 34 | 348 | 57 | 360 | 4.58e-39 | 142 |
| Msa1012790 | AT3G33520.1 | 26.498 | 434 | 211 | 12 | 4 | 349 | 2 | 415 | 3.08e-33 | 128 |
| Msa1012790 | AT5G56180.3 | 27.092 | 251 | 144 | 8 | 101 | 338 | 107 | 331 | 3.03e-17 | 82.0 |
| Msa1012790 | AT5G56180.1 | 24.793 | 242 | 161 | 5 | 101 | 338 | 239 | 463 | 3.52e-17 | 82.8 |
| Msa1012790 | AT3G12380.1 | 31.138 | 167 | 107 | 3 | 34 | 193 | 85 | 250 | 9.03e-16 | 79.0 |
| Msa1012790 | AT3G12380.2 | 31.176 | 170 | 109 | 3 | 34 | 196 | 91 | 259 | 9.24e-16 | 79.0 |
| Msa1012790 | AT1G73910.1 | 46.032 | 63 | 34 | 0 | 26 | 88 | 80 | 142 | 4.32e-12 | 63.5 |
| Msa1012790 | AT1G73910.2 | 46.032 | 63 | 34 | 0 | 26 | 88 | 80 | 142 | 4.32e-12 | 63.5 |
Find 110 sgRNAs with CRISPR-Local
Find 608 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTACTTACACTAAAGTTAA+TGG | 0.230356 | 7_1:+18229030 | Msa1012790:three_prime_UTR |
| CACAGGATGCACCAGAGTTT+TGG | 0.248455 | 7_1:+18228662 | Msa1012790:intron |
| ATCTTGTTGATTTGCTTTCT+AGG | 0.255963 | 7_1:+18224590 | Msa1012790:CDS |
| CTTGGTGGCGCTGTGCTTGC+AGG | 0.260996 | 7_1:+18228179 | Msa1012790:CDS |
| GTATTACCTCACACTTGTTT+TGG | 0.262546 | 7_1:-18229111 | None:intergenic |
| CACGGTTGGGTGGGTGGGTG+GGG | 0.301249 | 7_1:-18219714 | None:intergenic |
| CACACGGTTGGGTGGGTGGG+TGG | 0.321887 | 7_1:-18219716 | None:intergenic |
| ATTTCGTTGCATTCAAGAAA+TGG | 0.335946 | 7_1:+18226041 | Msa1012790:CDS |
| ATGTTAGAACAGCTTGGATT+TGG | 0.336073 | 7_1:-18222930 | None:intergenic |
| ACAATGGAATCGTTCAAAAC+TGG | 0.336694 | 7_1:+18222550 | Msa1012790:CDS |
| AGAAATACATGATCGTTATC+TGG | 0.351629 | 7_1:+18227471 | Msa1012790:CDS |
| GTTGTCTCAGGTTTGCTGAC+TGG | 0.353911 | 7_1:+18223272 | Msa1012790:intron |
| ATCCAGGTTCCAGTTGTTGA+TGG | 0.378370 | 7_1:+18224508 | Msa1012790:intron |
| AAGAGAAGCTGTGCTATATA+AGG | 0.381184 | 7_1:+18224769 | Msa1012790:CDS |
| AGTGGGCACCGAAAGGTTCC+AGG | 0.414167 | 7_1:+18225736 | Msa1012790:CDS |
| CAAGCACACGGTTGGGTGGG+TGG | 0.416327 | 7_1:-18219720 | None:intergenic |
| AGAAAGCAAATCAACAAGAT+AGG | 0.417134 | 7_1:-18224587 | None:intergenic |
| CAGGAACTTATTGATGTTGA+AGG | 0.425052 | 7_1:+18225997 | Msa1012790:intron |
| ACCGGAGTGAAAAGAGCCTT+GGG | 0.425433 | 7_1:-18225761 | None:intergenic |
| TGAGCTGCGATCGGTGGAAT+TGG | 0.427059 | 7_1:-18219777 | None:intergenic |
| GTCGTTTGCGACAACGGAAC+CGG | 0.429652 | 7_1:+18219820 | Msa1012790:CDS |
| TGTTTAATGCAAGCTGTTGA+AGG | 0.434297 | 7_1:-18228855 | None:intergenic |
| ACACGGTTGGGTGGGTGGGT+GGG | 0.434717 | 7_1:-18219715 | None:intergenic |
| CGATTCTTTGAGGGGTTAAG+AGG | 0.451286 | 7_1:-18222772 | None:intergenic |
| AATGAATAGCCATCAACAAC+TGG | 0.452353 | 7_1:-18224517 | None:intergenic |
| AACGTCGTCGTTTGCGACAA+CGG | 0.458806 | 7_1:+18219814 | Msa1012790:CDS |
| TACAAGAGGGAATATCAGTT+GGG | 0.462095 | 7_1:+18224878 | Msa1012790:CDS |
| ACTTTAATAACCCTTCCATC+TGG | 0.465099 | 7_1:-18225716 | None:intergenic |
| TGTTGATTTGCTTTCTAGGA+GGG | 0.465135 | 7_1:+18224594 | Msa1012790:CDS |
| GTAGAATCTTACAGTCTTGA+GGG | 0.475224 | 7_1:-18222738 | None:intergenic |
| CTTATTGATGTTGAAGGTGA+TGG | 0.477120 | 7_1:+18226003 | Msa1012790:CDS |
| AATTACCGGCTTGGTAATCC+AGG | 0.478482 | 7_1:-18226477 | None:intergenic |
| GGAGGGAGCACCATGTATCC+TGG | 0.478525 | 7_1:+18226459 | Msa1012790:CDS |
| TTGATTTGCTTTCTAGGAGG+GGG | 0.478917 | 7_1:+18224596 | Msa1012790:CDS |
| CAATGGAATCGTTCAAAACT+GGG | 0.480589 | 7_1:+18222551 | Msa1012790:CDS |
| GAAATTACGATTGAGAATTG+AGG | 0.487542 | 7_1:+18228127 | Msa1012790:intron |
| GAAATAAACAATTACCGGCT+TGG | 0.489984 | 7_1:-18226486 | None:intergenic |
| AAGCACACGGTTGGGTGGGT+GGG | 0.493728 | 7_1:-18219719 | None:intergenic |
| CATATAATGTTAGAACAGCT+TGG | 0.499158 | 7_1:-18222936 | None:intergenic |
| GACTGGATTAGTTATTGACT+CGG | 0.501957 | 7_1:+18223289 | Msa1012790:CDS |
| TACCGGAGTGAAAAGAGCCT+TGG | 0.502530 | 7_1:-18225762 | None:intergenic |
| AAGAAATGGATATTGACAAC+CGG | 0.510185 | 7_1:+18226055 | Msa1012790:CDS |
| GTTGATTTGCTTTCTAGGAG+GGG | 0.511197 | 7_1:+18224595 | Msa1012790:CDS |
| TTCTTTGAGGGGTTAAGAGG+TGG | 0.515769 | 7_1:-18222769 | None:intergenic |
| TGAACGATTCCATTGTTCAC+AGG | 0.516894 | 7_1:-18222543 | None:intergenic |
| AGATGGAAGGGTTATTAAAG+TGG | 0.518056 | 7_1:+18225718 | Msa1012790:CDS |
| TGAGCAGCAAGCACACGGTT+GGG | 0.519695 | 7_1:-18219727 | None:intergenic |
| TAGGATATTGTTGTTGGCGA+AGG | 0.522697 | 7_1:+18222483 | Msa1012790:intron |
| GGGCAACAAAGATGGATTGA+AGG | 0.522946 | 7_1:+18227507 | Msa1012790:CDS |
| ACAAAACGAATGAATGTAGC+TGG | 0.527868 | 7_1:+18224550 | Msa1012790:CDS |
| AGTAGAATCTTACAGTCTTG+AGG | 0.534001 | 7_1:-18222739 | None:intergenic |
| GTGAGCAGCAAGCACACGGT+TGG | 0.535161 | 7_1:-18219728 | None:intergenic |
| TTAGTTATTGACTCGGGCGA+TGG | 0.537671 | 7_1:+18223296 | Msa1012790:CDS |
| GGATATTGACAACCGGATGA+TGG | 0.543048 | 7_1:+18226062 | Msa1012790:CDS |
| AGGGAAGATTATCTAGAAGA+AGG | 0.543390 | 7_1:+18228691 | Msa1012790:CDS |
| TAAATCAGCTTCCAGATGGA+AGG | 0.543900 | 7_1:+18225705 | Msa1012790:intron |
| TGTGCTTGCAGGAATAATGA+AGG | 0.545334 | 7_1:+18228190 | Msa1012790:CDS |
| AAGCTTGGCCACACCTACTC+AGG | 0.547179 | 7_1:-18228723 | None:intergenic |
| TGGAGCATCATACCATCATC+CGG | 0.548244 | 7_1:-18226074 | None:intergenic |
| CAGCTTGCATTAAACACTGT+TGG | 0.548609 | 7_1:+18228862 | Msa1012790:three_prime_UTR |
| GCAGCAAGCACACGGTTGGG+TGG | 0.549621 | 7_1:-18219724 | None:intergenic |
| TTGTTGATTTGCTTTCTAGG+AGG | 0.550696 | 7_1:+18224593 | Msa1012790:CDS |
| CTACAAGAGGGAATATCAGT+TGG | 0.554095 | 7_1:+18224877 | Msa1012790:CDS |
| CTTGCAGTTATGACTACAAG+AGG | 0.554959 | 7_1:+18224864 | Msa1012790:intron |
| CAGCAAGCACACGGTTGGGT+GGG | 0.557480 | 7_1:-18219723 | None:intergenic |
| AAACACATGGTGTACCTTGG+TGG | 0.562101 | 7_1:+18228164 | Msa1012790:CDS |
| CCACCGATCGCAGCTCATCA+TGG | 0.564023 | 7_1:+18219783 | Msa1012790:exon |
| AAGGAATTGCTTGCCTGAGT+AGG | 0.564050 | 7_1:+18228710 | Msa1012790:CDS |
| GGAACTCGATAAGTCAAGCT+TGG | 0.564932 | 7_1:-18228738 | None:intergenic |
| GCTTGGTAATCCAGGATACA+TGG | 0.565351 | 7_1:-18226469 | None:intergenic |
| ATATATCAAGCTGATGCCGC+AGG | 0.572538 | 7_1:-18222515 | None:intergenic |
| ATATCTTATCCTGTGAACAA+TGG | 0.575935 | 7_1:+18222534 | Msa1012790:CDS |
| TCTCTAAATCAGCTTCCAGA+TGG | 0.584070 | 7_1:+18225701 | Msa1012790:intron |
| AACTAGCCTTCAGCTATACA+AGG | 0.586402 | 7_1:-18228885 | None:intergenic |
| AACAAGTGTGAGGTAATACA+AGG | 0.590256 | 7_1:+18229115 | Msa1012790:three_prime_UTR |
| TTATTAAAGTGGGCACCGAA+AGG | 0.590914 | 7_1:+18225729 | Msa1012790:CDS |
| AGATGTGAGCAGCAAGCACA+CGG | 0.592780 | 7_1:-18219732 | None:intergenic |
| GATGGAAGGGTTATTAAAGT+GGG | 0.593893 | 7_1:+18225719 | Msa1012790:CDS |
| AGGAAACACATGGTGTACCT+TGG | 0.598032 | 7_1:+18228161 | Msa1012790:CDS |
| TGTATCCTGGATTACCAAGC+CGG | 0.598645 | 7_1:+18226472 | Msa1012790:CDS |
| AAATCAGCTTCCAGATGGAA+GGG | 0.598757 | 7_1:+18225706 | Msa1012790:intron |
| TGATGTTGAAGGTGATGGAA+TGG | 0.599926 | 7_1:+18226008 | Msa1012790:CDS |
| TCCCTGTTAATCCAAAACTC+TGG | 0.600563 | 7_1:-18228673 | None:intergenic |
| TGTGAACACAATCACATCAG+AGG | 0.602553 | 7_1:+18228791 | Msa1012790:three_prime_UTR |
| ACTGGATTAGTTATTGACTC+GGG | 0.607042 | 7_1:+18223290 | Msa1012790:CDS |
| GTTCTAACATTATATGCCCA+AGG | 0.610362 | 7_1:+18222943 | Msa1012790:CDS |
| CCATGATGAGCTGCGATCGG+TGG | 0.612357 | 7_1:-18219783 | None:intergenic |
| ATAGTTCTTAACAAGGATTG+TGG | 0.618919 | 7_1:-18224909 | None:intergenic |
| CGGAGTGAAAAGAGCCTTGG+GGG | 0.619229 | 7_1:-18225759 | None:intergenic |
| CAAGATAGGAAGTTATATGT+CGG | 0.623473 | 7_1:-18224573 | None:intergenic |
| GGATGACATGTGTCATGTGT+GGG | 0.624936 | 7_1:+18222572 | Msa1012790:CDS |
| CTGACTAGACATTCTAACAA+AGG | 0.627924 | 7_1:+18219688 | None:intergenic |
| CTGCAAGCACAGCGCCACCA+AGG | 0.630295 | 7_1:-18228178 | None:intergenic |
| GGGCGATGGTGTCACTCATG+TGG | 0.630641 | 7_1:+18223310 | Msa1012790:CDS |
| ACCATGTGTTTCCTACGTGG+TGG | 0.631600 | 7_1:-18228152 | None:intergenic |
| AGGTGATGGAATGGCTGACA+TGG | 0.632586 | 7_1:+18226017 | Msa1012790:CDS |
| TGTCCATGATGAGCTGCGAT+CGG | 0.633067 | 7_1:-18219786 | None:intergenic |
| TGTTGGCCTTGTATAGCTGA+AGG | 0.635847 | 7_1:+18228879 | Msa1012790:three_prime_UTR |
| TTGCAGTTATGACTACAAGA+GGG | 0.639403 | 7_1:+18224865 | Msa1012790:intron |
| TTACAGTATAGTTCTTAACA+AGG | 0.644900 | 7_1:-18224916 | None:intergenic |
| AAACTCTCAACAAAGTAACA+TGG | 0.646889 | 7_1:-18229008 | None:intergenic |
| GATTTCAGTTTGAGTTCGCG+CGG | 0.666989 | 7_1:-18219755 | None:intergenic |
| TATGAGCCAAAACAAGTGTG+AGG | 0.667849 | 7_1:+18229105 | Msa1012790:three_prime_UTR |
| ATTGCTTGCCTGAGTAGGTG+TGG | 0.674098 | 7_1:+18228715 | Msa1012790:CDS |
| ACAAGAGGGAATATCAGTTG+GGG | 0.674160 | 7_1:+18224879 | Msa1012790:CDS |
| TACACCATGTGTTTCCTACG+TGG | 0.676507 | 7_1:-18228155 | None:intergenic |
| GGGATGACATGTGTCATGTG+TGG | 0.678733 | 7_1:+18222571 | Msa1012790:CDS |
| TCCACCACGTAGGAAACACA+TGG | 0.706370 | 7_1:+18228151 | Msa1012790:CDS |
| CCGGAGTGAAAAGAGCCTTG+GGG | 0.732789 | 7_1:-18225760 | None:intergenic |
| GAATTGAGGATCCACCACGT+AGG | 0.762224 | 7_1:+18228141 | Msa1012790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATAAAAATATAAGAGAT+AGG | - | chr7_1:18223401-18223420 | None:intergenic | 10.0% |
| !!! | TATTATCATTTTTATTGTTA+TGG | + | chr7_1:18225151-18225170 | Msa1012790:intron | 10.0% |
| !! | TTCTAATATATTTCAAAAAT+TGG | - | chr7_1:18225256-18225275 | None:intergenic | 10.0% |
| !!! | TTTTTGAAATATATTAGAAT+TGG | + | chr7_1:18225257-18225276 | Msa1012790:intron | 10.0% |
| !! | AAAAAAAAACTTATATTGTA+GGG | - | chr7_1:18225304-18225323 | None:intergenic | 10.0% |
| !! | AAAAAAAAAACTTATATTGT+AGG | - | chr7_1:18225305-18225324 | None:intergenic | 10.0% |
| !!! | AATAGTTTTCAAAAAAATTA+TGG | - | chr7_1:18226156-18226175 | None:intergenic | 10.0% |
| !!! | TTCTATTATAAACCATATTT+TGG | - | chr7_1:18220459-18220478 | None:intergenic | 15.0% |
| !!! | TGTTTATAAATTAGTTTTGT+GGG | + | chr7_1:18221126-18221145 | Msa1012790:intron | 15.0% |
| !! | GTTATTCTAGATTTATTATT+GGG | + | chr7_1:18221168-18221187 | Msa1012790:intron | 15.0% |
| !!! | TTACTATCATTTTAGAATTT+GGG | - | chr7_1:18221993-18222012 | None:intergenic | 15.0% |
| !!! | TTTACTATCATTTTAGAATT+TGG | - | chr7_1:18221994-18222013 | None:intergenic | 15.0% |
| !! | GAGAAAGAAAAAAAAAAAAA+AGG | - | chr7_1:18222640-18222659 | None:intergenic | 15.0% |
| !! | AACTCTAATTATTAACATAT+AGG | + | chr7_1:18223069-18223088 | Msa1012790:intron | 15.0% |
| !! | AATACATTATAAAATATCCA+AGG | - | chr7_1:18223105-18223124 | None:intergenic | 15.0% |
| !!! | AAATGATTATTGATTTTAGT+TGG | + | chr7_1:18224986-18225005 | Msa1012790:intron | 15.0% |
| !! | TAATATATTTCAAAAATTGG+AGG | - | chr7_1:18225253-18225272 | None:intergenic | 15.0% |
| !!! | AAAGATACTTTTTAAACTTT+AGG | + | chr7_1:18225481-18225500 | Msa1012790:intron | 15.0% |
| !!! | AAGATACTTTTTAAACTTTA+GGG | + | chr7_1:18225482-18225501 | Msa1012790:intron | 15.0% |
| !! | AAAAAAAAAAAAAACACCTA+TGG | - | chr7_1:18225587-18225606 | None:intergenic | 15.0% |
| !! | ATTAAAGTATAGAATGATTA+TGG | + | chr7_1:18225848-18225867 | Msa1012790:intron | 15.0% |
| !!! | TATTTTTTCTACAATAACAA+TGG | - | chr7_1:18225925-18225944 | None:intergenic | 15.0% |
| !! | TGAAGTATATAGATTTAAAA+TGG | - | chr7_1:18226097-18226116 | None:intergenic | 15.0% |
| !! | TATAAATAAAACAACTAACA+CGG | - | chr7_1:18226234-18226253 | None:intergenic | 15.0% |
| !! | ACTTAATAAACAATTTATGA+TGG | + | chr7_1:18227304-18227323 | Msa1012790:intron | 15.0% |
| !!! | TTTAATATATTTTTGTCTGT+TGG | + | chr7_1:18227342-18227361 | Msa1012790:intron | 15.0% |
| !! | AAAAATGTTAACAAGTTAAA+AGG | - | chr7_1:18228090-18228109 | None:intergenic | 15.0% |
| !! | TAAACTATTAAGTATCTATT+TGG | - | chr7_1:18228518-18228537 | None:intergenic | 15.0% |
| !!! | TTTAGAGTATTCAAATAATT+TGG | + | chr7_1:18228581-18228600 | Msa1012790:intron | 15.0% |
| !!! | TTAGAGTATTCAAATAATTT+GGG | + | chr7_1:18228582-18228601 | Msa1012790:intron | 15.0% |
| !!! | ATTTGAGATTAGTGATTTAT+TGG | - | chr7_1:18219920-18219939 | None:intergenic | 20.0% |
| !! | AAATTCAATAATCCAAACAA+CGG | - | chr7_1:18220021-18220040 | None:intergenic | 20.0% |
| !! | ATCTGAGAAATTATTAGTAA+AGG | + | chr7_1:18220412-18220431 | Msa1012790:intron | 20.0% |
| !! | AGAAATTATTAGTAAAGGTT+TGG | + | chr7_1:18220417-18220436 | Msa1012790:intron | 20.0% |
| !! | TCTATGTTGGAAAATAAAAA+AGG | + | chr7_1:18220878-18220897 | Msa1012790:intron | 20.0% |
| !!! | GTGTTTATAAATTAGTTTTG+TGG | + | chr7_1:18221125-18221144 | Msa1012790:intron | 20.0% |
| !! | GGTTATTCTAGATTTATTAT+TGG | + | chr7_1:18221167-18221186 | Msa1012790:intron | 20.0% |
| !! | AAATGCATATGGAAAAAATT+TGG | - | chr7_1:18221493-18221512 | None:intergenic | 20.0% |
| !! | AAGCATTATAAACACTATAT+GGG | - | chr7_1:18222308-18222327 | None:intergenic | 20.0% |
| !! | ATATAGTGTTTATAATGCTT+GGG | + | chr7_1:18222308-18222327 | Msa1012790:intron | 20.0% |
| !! | TTATTATGATAACTAGACTT+GGG | - | chr7_1:18222375-18222394 | None:intergenic | 20.0% |
| !! | ATTATTATGATAACTAGACT+TGG | - | chr7_1:18222376-18222395 | None:intergenic | 20.0% |
| !! | ATATAGGTATTTATAAACCT+TGG | + | chr7_1:18223085-18223104 | Msa1012790:intron | 20.0% |
| !! | ATGCTTCTTAATTATAATTC+TGG | + | chr7_1:18223349-18223368 | Msa1012790:intron | 20.0% |
| !! | ATGTTAATCTTAAGAAATAC+TGG | + | chr7_1:18223481-18223500 | Msa1012790:intron | 20.0% |
| !!! | CTAAAATATCTTGTTTTTCT+AGG | - | chr7_1:18223805-18223824 | None:intergenic | 20.0% |
| !!! | TGTTCATAACTTCATTTTTA+TGG | + | chr7_1:18223937-18223956 | Msa1012790:intron | 20.0% |
| !!! | ATTCATCTATTTTTTTTTGG+TGG | - | chr7_1:18224108-18224127 | None:intergenic | 20.0% |
| !!! | TGCATTCATCTATTTTTTTT+TGG | - | chr7_1:18224111-18224130 | None:intergenic | 20.0% |
| !!! | TTATATAGATCCATGTTTTA+AGG | + | chr7_1:18224392-18224411 | Msa1012790:intron | 20.0% |
| !! | ACAAATCTCAATTCAAATAT+TGG | + | chr7_1:18224798-18224817 | Msa1012790:intron | 20.0% |
| !! | ATATTTACAGACATACATTA+AGG | - | chr7_1:18225111-18225130 | None:intergenic | 20.0% |
| !! | ATTGAAAGTCAAATATTACA+GGG | - | chr7_1:18225347-18225366 | None:intergenic | 20.0% |
| !! | AATTGAAAGTCAAATATTAC+AGG | - | chr7_1:18225348-18225367 | None:intergenic | 20.0% |
| !! | TGGAAAAAGAAATTTATTAG+AGG | + | chr7_1:18225402-18225421 | Msa1012790:intron | 20.0% |
| !! | GGAAAAAGAAATTTATTAGA+GGG | + | chr7_1:18225403-18225422 | Msa1012790:intron | 20.0% |
| !!! | ATATAGCATGTATAATTTTC+TGG | + | chr7_1:18225942-18225961 | Msa1012790:intron | 20.0% |
| !! | AGTGTAAATTCTTCAATTTA+AGG | - | chr7_1:18226350-18226369 | None:intergenic | 20.0% |
| !!! | TTGATGATATTAAAAAACTG+AGG | - | chr7_1:18226552-18226571 | None:intergenic | 20.0% |
| !! | GAAAATTAAACTAATGAATG+AGG | - | chr7_1:18226612-18226631 | None:intergenic | 20.0% |
| !! | AGAATAAAATATCATAACCA+TGG | - | chr7_1:18226643-18226662 | None:intergenic | 20.0% |
| !! | ATTATCCTTCATTATTTGTA+TGG | + | chr7_1:18227186-18227205 | Msa1012790:intron | 20.0% |
| !! | TTATCCTTCATTATTTGTAT+GGG | + | chr7_1:18227187-18227206 | Msa1012790:intron | 20.0% |
| !! | GAAAGAGAAATTAAAAGAAT+AGG | + | chr7_1:18227209-18227228 | Msa1012790:intron | 20.0% |
| !! | GAAAATAAACAATGTTTCAT+TGG | + | chr7_1:18227269-18227288 | Msa1012790:intron | 20.0% |
| !! | TAATAAACAATTTATGATGG+AGG | + | chr7_1:18227307-18227326 | Msa1012790:intron | 20.0% |
| !!! | AATAAACAATTTATGATGGA+GGG | + | chr7_1:18227308-18227327 | Msa1012790:intron | 20.0% |
| !! | TGTTACATAAATTCTTTCAA+TGG | - | chr7_1:18227591-18227610 | None:intergenic | 20.0% |
| !!! | CAGTTTCAATTATTTTCATT+CGG | - | chr7_1:18227736-18227755 | None:intergenic | 20.0% |
| !! | TTATTAGTGATTATTTAGGT+GGG | - | chr7_1:18227816-18227835 | None:intergenic | 20.0% |
| !!! | TGTGTTATTAGTGATTATTT+AGG | - | chr7_1:18227820-18227839 | None:intergenic | 20.0% |
| !! | ATATTGTCAATAATAGACAT+AGG | - | chr7_1:18227920-18227939 | None:intergenic | 20.0% |
| !! | AATTACACAATATACAGTAA+GGG | - | chr7_1:18228005-18228024 | None:intergenic | 20.0% |
| !!! | GTTAACATTTTTCTTGTTAT+TGG | + | chr7_1:18228098-18228117 | Msa1012790:intron | 20.0% |
| ! | AGAATCAAACTACATTTCAA+TGG | + | chr7_1:18219892-18219911 | Msa1012790:intron | 25.0% |
| ! | AAAATCTTCAAAGTCATGTT+TGG | - | chr7_1:18220194-18220213 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTGTTCGAACCT+CGG | + | chr7_1:18220245-18220264 | Msa1012790:intron | 25.0% |
| !! | AGAGATGATATTTTCTATGT+TGG | + | chr7_1:18220865-18220884 | Msa1012790:intron | 25.0% |
| ! | ATTTAGAAACTAGTCATGAT+GGG | - | chr7_1:18220952-18220971 | None:intergenic | 25.0% |
| !! | ACTAGTTTCTAAATCAAACA+TGG | + | chr7_1:18220958-18220977 | Msa1012790:intron | 25.0% |
| !!! | TTTGATTTGCTAAAAAACAG+AGG | - | chr7_1:18221004-18221023 | None:intergenic | 25.0% |
| !! | TTTTCGGTAAACAAAAGTTT+AGG | - | chr7_1:18221083-18221102 | None:intergenic | 25.0% |
| ! | TTGTTTACCGAAAAAAAAAG+AGG | + | chr7_1:18221089-18221108 | Msa1012790:intron | 25.0% |
| ! | CTAATTTATAAACACTACCT+TGG | - | chr7_1:18221120-18221139 | None:intergenic | 25.0% |
| !!! | ATTTCAAATGTCGGTTTTAT+GGG | + | chr7_1:18221226-18221245 | Msa1012790:intron | 25.0% |
| ! | AACAACACTATCTTAGAATT+TGG | - | chr7_1:18221271-18221290 | None:intergenic | 25.0% |
| ! | TTGTCAATAGTAGAAAATAG+AGG | - | chr7_1:18221426-18221445 | None:intergenic | 25.0% |
| ! | TTAACAACACTAAATGCATA+TGG | - | chr7_1:18221504-18221523 | None:intergenic | 25.0% |
| !! | TATGCATTTAGTGTTGTTAA+AGG | + | chr7_1:18221504-18221523 | Msa1012790:intron | 25.0% |
| ! | ACATCAGAAATTCTAAATTG+TGG | - | chr7_1:18221717-18221736 | None:intergenic | 25.0% |
| !! | ATGTCCATTTCTGAAAATAA+GGG | + | chr7_1:18221733-18221752 | Msa1012790:intron | 25.0% |
| ! | CTTATTCCGTATTTGTAATT+GGG | + | chr7_1:18222015-18222034 | Msa1012790:intron | 25.0% |
| !!! | CTTACTTCAGATTTGTTATT+GGG | + | chr7_1:18222115-18222134 | Msa1012790:intron | 25.0% |
| !! | TCTAAAGTGTGGATTAATAT+GGG | - | chr7_1:18222220-18222239 | None:intergenic | 25.0% |
| !!! | TTCTAAAGTGTGGATTAATA+TGG | - | chr7_1:18222221-18222240 | None:intergenic | 25.0% |
| ! | CAAGCATTATAAACACTATA+TGG | - | chr7_1:18222309-18222328 | None:intergenic | 25.0% |
| ! | CATATAGTGTTTATAATGCT+TGG | + | chr7_1:18222307-18222326 | Msa1012790:intron | 25.0% |
| !! | TTGAAGTTATGTTCCATTTT+AGG | + | chr7_1:18222464-18222483 | Msa1012790:intron | 25.0% |
| ! | AAAAAAAAAGGACTATCAGA+AGG | - | chr7_1:18222628-18222647 | None:intergenic | 25.0% |
| ! | ACAACTAAGAATTAGCAAAA+GGG | - | chr7_1:18222830-18222849 | None:intergenic | 25.0% |
| ! | AACAACTAAGAATTAGCAAA+AGG | - | chr7_1:18222831-18222850 | None:intergenic | 25.0% |
| !!! | TTTATTTTTGAGACCATATG+TGG | + | chr7_1:18223130-18223149 | Msa1012790:intron | 25.0% |
| ! | ATATATGATGTATCCACATA+TGG | - | chr7_1:18223146-18223165 | None:intergenic | 25.0% |
| ! | ATTTCAAAGCATAGCAAATT+AGG | - | chr7_1:18223169-18223188 | None:intergenic | 25.0% |
| !!! | AATTTGCTATGCTTTGAAAT+AGG | + | chr7_1:18223169-18223188 | Msa1012790:intron | 25.0% |
| ! | GAGAAATTATATTGCAAAGT+TGG | + | chr7_1:18223529-18223548 | Msa1012790:intron | 25.0% |
| !! | TTATATTGCAAAGTTGGTTA+TGG | + | chr7_1:18223535-18223554 | Msa1012790:intron | 25.0% |
| ! | TATTCATACTACAATCACAA+AGG | + | chr7_1:18223760-18223779 | Msa1012790:intron | 25.0% |
| ! | ATTCATACTACAATCACAAA+GGG | + | chr7_1:18223761-18223780 | Msa1012790:intron | 25.0% |
| ! | ATATCATAACATATCCTTAG+CGG | + | chr7_1:18224149-18224168 | Msa1012790:intron | 25.0% |
| ! | ACATTTCACCATTTCAAATT+TGG | - | chr7_1:18224277-18224296 | None:intergenic | 25.0% |
| ! | TGAAGCACAATTTATGAATA+TGG | + | chr7_1:18224320-18224339 | Msa1012790:intron | 25.0% |
| ! | TTAGAGTTGAAGCATAAAAA+GGG | - | chr7_1:18224676-18224695 | None:intergenic | 25.0% |
| !!! | ATTCAAATATTGGTTTTGTG+TGG | + | chr7_1:18224808-18224827 | Msa1012790:intron | 25.0% |
| ! | TTACAGTATAGTTCTTAACA+AGG | - | chr7_1:18224919-18224938 | None:intergenic | 25.0% |
| !!! | TTGATTTTAGTTGGAAATTC+TGG | + | chr7_1:18224995-18225014 | Msa1012790:intron | 25.0% |
| !!! | ATTTTTAGTTCCCTAACTTA+AGG | + | chr7_1:18225182-18225201 | Msa1012790:intron | 25.0% |
| ! | GAAAGTTTAGAGACTAAAAT+CGG | - | chr7_1:18225214-18225233 | None:intergenic | 25.0% |
| !! | AGTTTGAAAAACTGATTTAG+AGG | - | chr7_1:18225817-18225836 | None:intergenic | 25.0% |
| ! | CATTACAAATATCTAAAAGC+AGG | - | chr7_1:18226268-18226287 | None:intergenic | 25.0% |
| !!! | CTGCTTTTAGATATTTGTAA+TGG | + | chr7_1:18226266-18226285 | Msa1012790:intron | 25.0% |
| ! | ATGATACTCATTTAGAAAGA+TGG | - | chr7_1:18226318-18226337 | None:intergenic | 25.0% |
| !! | GAATAAGTTGTATGACATTT+TGG | - | chr7_1:18226385-18226404 | None:intergenic | 25.0% |
| ! | CAAAAGATCAGAAAATAATG+TGG | - | chr7_1:18226407-18226426 | None:intergenic | 25.0% |
| !!! | TATCAACACATAGTTTTAAG+TGG | + | chr7_1:18226438-18226457 | Msa1012790:CDS | 25.0% |
| ! | AAGGAGAAATAAACAATTAC+CGG | - | chr7_1:18226494-18226513 | None:intergenic | 25.0% |
| ! | TGAGGAACACAAAAAATTAA+GGG | - | chr7_1:18226534-18226553 | None:intergenic | 25.0% |
| !! | TTAATTTTCAGCTAAATCCA+TGG | + | chr7_1:18226623-18226642 | Msa1012790:intron | 25.0% |
| ! | CTATATACTAACGAGTTAAA+AGG | + | chr7_1:18226661-18226680 | Msa1012790:intron | 25.0% |
| !!! | CTTGTACATGTATTTTGAAA+TGG | - | chr7_1:18226765-18226784 | None:intergenic | 25.0% |
| ! | CATTATTGTTAGTGTAGAAT+TGG | + | chr7_1:18226816-18226835 | Msa1012790:intron | 25.0% |
| !!! | ACATATAATAGAGTTCTAGA+TGG | - | chr7_1:18226965-18226984 | None:intergenic | 25.0% |
| !! | TCTAGAACTCTATTATATGT+TGG | + | chr7_1:18226965-18226984 | Msa1012790:intron | 25.0% |
| ! | TTCTATATATATTGCAAGCA+AGG | + | chr7_1:18227044-18227063 | Msa1012790:intron | 25.0% |
| !!! | GAAATGTAGTTAGTTTTGTA+TGG | + | chr7_1:18227136-18227155 | Msa1012790:intron | 25.0% |
| ! | AGAGAGTAATAAATAGCAAA+GGG | + | chr7_1:18227238-18227257 | Msa1012790:intron | 25.0% |
| !!! | TGGTTCTTCTAAAATTGTTA+GGG | + | chr7_1:18227375-18227394 | Msa1012790:intron | 25.0% |
| !! | TCTTTTTCCAATCTGAAAAT+GGG | - | chr7_1:18227454-18227473 | None:intergenic | 25.0% |
| !! | TTCTTTTTCCAATCTGAAAA+TGG | - | chr7_1:18227455-18227474 | None:intergenic | 25.0% |
| ! | AAGTTTATTGATGAATTCTC+TGG | + | chr7_1:18227616-18227635 | Msa1012790:intron | 25.0% |
| ! | GAAAACAATAGAAACTAAAC+TGG | + | chr7_1:18227691-18227710 | Msa1012790:intron | 25.0% |
| ! | GTTATTAGTGATTATTTAGG+TGG | - | chr7_1:18227817-18227836 | None:intergenic | 25.0% |
| ! | CAATTACACAATATACAGTA+AGG | - | chr7_1:18228006-18228025 | None:intergenic | 25.0% |
| !!! | AGCTTATATTTTAGTAGCTT+TGG | + | chr7_1:18228252-18228271 | Msa1012790:intron | 25.0% |
| ! | CTGTTGTTAAAAAAAGTTGT+TGG | + | chr7_1:18228315-18228334 | Msa1012790:intron | 25.0% |
| !!! | ATACTCTAAAGTGAATAATG+TGG | - | chr7_1:18228571-18228590 | None:intergenic | 25.0% |
| ! | TGTACTTACACTAAAGTTAA+TGG | + | chr7_1:18229030-18229049 | Msa1012790:three_prime_UTR | 25.0% |
| !! | GCAACAATATTTTCAACAAA+TGG | - | chr7_1:18229066-18229085 | None:intergenic | 25.0% |
| CAGAAACTCAAATATCGAAT+TGG | - | chr7_1:18219980-18219999 | None:intergenic | 30.0% | |
| AAAATTCAGTATGTGAAGTG+TGG | + | chr7_1:18220063-18220082 | Msa1012790:intron | 30.0% | |
| TTGATCTATGAGATCATATG+TGG | + | chr7_1:18220330-18220349 | Msa1012790:intron | 30.0% | |
| ! | ATTTCTCAGATAGTTTGTCT+AGG | - | chr7_1:18220403-18220422 | None:intergenic | 30.0% |
| AGGTTTGGAAATTAATGAGT+TGG | + | chr7_1:18220432-18220451 | Msa1012790:intron | 30.0% | |
| ! | TAATGAGTTGGACCAAAATA+TGG | + | chr7_1:18220444-18220463 | Msa1012790:intron | 30.0% |
| AATCACATAATTCAGTGTGT+CGG | + | chr7_1:18220601-18220620 | Msa1012790:intron | 30.0% | |
| ATTCGCAAAACATTAAGTTC+TGG | + | chr7_1:18220807-18220826 | Msa1012790:intron | 30.0% | |
| TAGAAAATATCATCTCTCTC+TGG | - | chr7_1:18220862-18220881 | None:intergenic | 30.0% | |
| AGAAATAGGAATTCTGTCTA+GGG | - | chr7_1:18220922-18220941 | None:intergenic | 30.0% | |
| GATTTAGAAACTAGTCATGA+TGG | - | chr7_1:18220953-18220972 | None:intergenic | 30.0% | |
| AAACAAAAGTTTAGGTGAGT+GGG | - | chr7_1:18221075-18221094 | None:intergenic | 30.0% | |
| TAAACAAAAGTTTAGGTGAG+TGG | - | chr7_1:18221076-18221095 | None:intergenic | 30.0% | |
| !!! | GGACATACCTCTTTTTTTTT+CGG | - | chr7_1:18221099-18221118 | None:intergenic | 30.0% |
| ! | AAAAAAAAGAGGTATGTCCA+AGG | + | chr7_1:18221100-18221119 | Msa1012790:intron | 30.0% |
| ! | ATTTGAAATGTGGACAAATG+CGG | - | chr7_1:18221215-18221234 | None:intergenic | 30.0% |
| TTTGTCCACATTTCAAATGT+CGG | + | chr7_1:18221217-18221236 | Msa1012790:intron | 30.0% | |
| ! | TAAAACCGACATTTGAAATG+TGG | - | chr7_1:18221225-18221244 | None:intergenic | 30.0% |
| !!! | CATTTCAAATGTCGGTTTTA+TGG | + | chr7_1:18221225-18221244 | Msa1012790:intron | 30.0% |
| !!! | TTTCAAATGTCGGTTTTATG+GGG | + | chr7_1:18221227-18221246 | Msa1012790:intron | 30.0% |
| TGTTTGTCAAAAAAAAGCCA+CGG | - | chr7_1:18221530-18221549 | None:intergenic | 30.0% | |
| ! | TCTAAATTGTGGACTAATGT+GGG | - | chr7_1:18221706-18221725 | None:intergenic | 30.0% |
| ! | TTCTAAATTGTGGACTAATG+TGG | - | chr7_1:18221707-18221726 | None:intergenic | 30.0% |
| ! | GATGTCCATTTCTGAAAATA+AGG | + | chr7_1:18221732-18221751 | Msa1012790:intron | 30.0% |
| !! | TGCTTATAAACCAGTTTTGT+GGG | + | chr7_1:18221950-18221969 | Msa1012790:intron | 30.0% |
| !!! | CATTTTAGAATTTGGGCTTA+AGG | - | chr7_1:18221986-18222005 | None:intergenic | 30.0% |
| GCTTATTCCGTATTTGTAAT+TGG | + | chr7_1:18222014-18222033 | Msa1012790:intron | 30.0% | |
| !! | ACTTCAAATGTCAGTTTTGT+GGG | + | chr7_1:18222062-18222081 | Msa1012790:intron | 30.0% |
| ! | TCTGAAGTAAGCTAGAATTA+GGG | - | chr7_1:18222106-18222125 | None:intergenic | 30.0% |
| ! | ATCTGAAGTAAGCTAGAATT+AGG | - | chr7_1:18222107-18222126 | None:intergenic | 30.0% |
| !! | GCTTACTTCAGATTTGTTAT+TGG | + | chr7_1:18222114-18222133 | Msa1012790:intron | 30.0% |
| TTGAAAGCAGGAAATTAAAG+TGG | - | chr7_1:18222405-18222424 | None:intergenic | 30.0% | |
| CCAACAACAATATCCTAAAA+TGG | - | chr7_1:18222480-18222499 | None:intergenic | 30.0% | |
| !!! | CCATTTTAGGATATTGTTGT+TGG | + | chr7_1:18222477-18222496 | Msa1012790:intron | 30.0% |
| ATATCTTATCCTGTGAACAA+TGG | + | chr7_1:18222534-18222553 | Msa1012790:CDS | 30.0% | |
| !! | TTTGATTTTGTACCTAACTC+TGG | + | chr7_1:18222690-18222709 | Msa1012790:intron | 30.0% |
| !!! | ATTTTTTCGCGATTCTTTGA+GGG | - | chr7_1:18222784-18222803 | None:intergenic | 30.0% |
| TTTACATGATTTGACCTTGT+AGG | + | chr7_1:18222864-18222883 | Msa1012790:intron | 30.0% | |
| !! | TTTGAGAAGTACAATTTTGC+TGG | + | chr7_1:18222898-18222917 | Msa1012790:CDS | 30.0% |
| CATATAATGTTAGAACAGCT+TGG | - | chr7_1:18222939-18222958 | None:intergenic | 30.0% | |
| TATGGGTGTAAACTCTAATT+AGG | - | chr7_1:18223020-18223039 | None:intergenic | 30.0% | |
| GAATGAGTAACAGTAAGTAT+GGG | - | chr7_1:18223037-18223056 | None:intergenic | 30.0% | |
| AGAATGAGTAACAGTAAGTA+TGG | - | chr7_1:18223038-18223057 | None:intergenic | 30.0% | |
| TACTTACTGTTACTCATTCT+TGG | + | chr7_1:18223038-18223057 | Msa1012790:intron | 30.0% | |
| TTCACGCTTCCTTTATTATT+AGG | + | chr7_1:18223197-18223216 | Msa1012790:intron | 30.0% | |
| TCCTTTATTATTAGGTCTCT+TGG | + | chr7_1:18223205-18223224 | Msa1012790:intron | 30.0% | |
| CCTTTATTATTAGGTCTCTT+GGG | + | chr7_1:18223206-18223225 | Msa1012790:intron | 30.0% | |
| TGTTATGAATGCACAGATAA+AGG | - | chr7_1:18223244-18223263 | None:intergenic | 30.0% | |
| GTGCATTCATAACATTTCTT+TGG | + | chr7_1:18223250-18223269 | Msa1012790:intron | 30.0% | |
| TATAATTCTGGTCACTACAA+TGG | + | chr7_1:18223361-18223380 | Msa1012790:intron | 30.0% | |
| ! | CACATATTGTATTTCTGTGT+CGG | - | chr7_1:18223507-18223526 | None:intergenic | 30.0% |
| TTAATCCATCCAACTCATAT+AGG | - | chr7_1:18223612-18223631 | None:intergenic | 30.0% | |
| ! | ATCTAGAAATGATTTGCAAC+AGG | - | chr7_1:18223637-18223656 | None:intergenic | 30.0% |
| ! | CAAATCATTTCTAGATGAGT+TGG | + | chr7_1:18223641-18223660 | Msa1012790:intron | 30.0% |
| !!! | AGTTGTTTTTCTAAACCTGT+TGG | + | chr7_1:18223701-18223720 | Msa1012790:intron | 30.0% |
| !!! | GTTGTTTTTCTAAACCTGTT+GGG | + | chr7_1:18223702-18223721 | Msa1012790:intron | 30.0% |
| TTCATACTACAATCACAAAG+GGG | + | chr7_1:18223762-18223781 | Msa1012790:intron | 30.0% | |
| AGTTGTGTGAGTAAGTAAAA+AGG | - | chr7_1:18223851-18223870 | None:intergenic | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | + | chr7_1:18224060-18224079 | Msa1012790:intron | 30.0% | |
| !!! | CATCTATTTTTTTTTGGTGG+TGG | - | chr7_1:18224105-18224124 | None:intergenic | 30.0% |
| !!! | TACTTTTTCTGCATTGCTTT+TGG | + | chr7_1:18224246-18224265 | Msa1012790:intron | 30.0% |
| TGGTTGAACCAAATTTGAAA+TGG | + | chr7_1:18224266-18224285 | Msa1012790:intron | 30.0% | |
| ! | CCAAGATTATATTTGGTGAA+CGG | - | chr7_1:18224362-18224381 | None:intergenic | 30.0% |
| TTGTGCACCAAGATTATATT+TGG | - | chr7_1:18224369-18224388 | None:intergenic | 30.0% | |
| !!! | AAAGTTTTGAACTTTGATCC+AGG | + | chr7_1:18224492-18224511 | Msa1012790:intron | 30.0% |
| CAAGATAGGAAGTTATATGT+CGG | - | chr7_1:18224576-18224595 | None:intergenic | 30.0% | |
| AGAAAGCAAATCAACAAGAT+AGG | - | chr7_1:18224590-18224609 | None:intergenic | 30.0% | |
| !! | ATCTTGTTGATTTGCTTTCT+AGG | + | chr7_1:18224590-18224609 | Msa1012790:CDS | 30.0% |
| GTTAGAGTTGAAGCATAAAA+AGG | - | chr7_1:18224677-18224696 | None:intergenic | 30.0% | |
| !!! | ATTCTGATTTTGAGACTGTA+AGG | + | chr7_1:18224739-18224758 | Msa1012790:CDS | 30.0% |
| !!! | TTCTGATTTTGAGACTGTAA+GGG | + | chr7_1:18224740-18224759 | Msa1012790:CDS | 30.0% |
| ATAGTTCTTAACAAGGATTG+TGG | - | chr7_1:18224912-18224931 | None:intergenic | 30.0% | |
| AATAATCATTTACGCAGAAC+TGG | - | chr7_1:18224977-18224996 | None:intergenic | 30.0% | |
| !!! | ATTTTAGTTGGAAATTCTGG+TGG | + | chr7_1:18224998-18225017 | Msa1012790:intron | 30.0% |
| AAGGCACAAAAACAATGAAT+TGG | - | chr7_1:18225092-18225111 | None:intergenic | 30.0% | |
| AGGGACTAAAATAAAACAAC+TGG | + | chr7_1:18225422-18225441 | Msa1012790:intron | 30.0% | |
| !!! | GTTTTGAAATGTGCTACAAT+TGG | - | chr7_1:18225450-18225469 | None:intergenic | 30.0% |
| GTAGCACATTTCAAAACATT+CGG | + | chr7_1:18225453-18225472 | Msa1012790:intron | 30.0% | |
| TAATAGTCCTCCATTCATTT+GGG | - | chr7_1:18225525-18225544 | None:intergenic | 30.0% | |
| ATAATAGTCCTCCATTCATT+TGG | - | chr7_1:18225526-18225545 | None:intergenic | 30.0% | |
| AAAAAAAACACCTATGGAAG+TGG | - | chr7_1:18225581-18225600 | None:intergenic | 30.0% | |
| ATTTCGTTGCATTCAAGAAA+TGG | + | chr7_1:18226041-18226060 | Msa1012790:CDS | 30.0% | |
| AAGAAATGGATATTGACAAC+CGG | + | chr7_1:18226055-18226074 | Msa1012790:CDS | 30.0% | |
| AATCTCATTATCTCAAGACA+TGG | + | chr7_1:18226116-18226135 | Msa1012790:intron | 30.0% | |
| ACAAATATCTAAAAGCAGGT+GGG | - | chr7_1:18226264-18226283 | None:intergenic | 30.0% | |
| TACAAATATCTAAAAGCAGG+TGG | - | chr7_1:18226265-18226284 | None:intergenic | 30.0% | |
| !!! | AACACATAGTTTTAAGTGGA+GGG | + | chr7_1:18226442-18226461 | Msa1012790:CDS | 30.0% |
| CTGAGGAACACAAAAAATTA+AGG | - | chr7_1:18226535-18226554 | None:intergenic | 30.0% | |
| TTGAAATGGACAGTATAAAG+CGG | - | chr7_1:18226751-18226770 | None:intergenic | 30.0% | |
| TCAAAATACATGTACAAGAG+TGG | + | chr7_1:18226767-18226786 | Msa1012790:intron | 30.0% | |
| CAAAATACATGTACAAGAGT+GGG | + | chr7_1:18226768-18226787 | Msa1012790:intron | 30.0% | |
| CATGTTAAGTACTAGACAAT+AGG | - | chr7_1:18226905-18226924 | None:intergenic | 30.0% | |
| ! | TGTACCTCCATATTTTTCTT+TGG | + | chr7_1:18226930-18226949 | Msa1012790:intron | 30.0% |
| ! | CTTTTGGCCAAAGAAAAATA+TGG | - | chr7_1:18226940-18226959 | None:intergenic | 30.0% |
| ATCATTTAGCTGAGATGAAA+GGG | - | chr7_1:18227018-18227037 | None:intergenic | 30.0% | |
| TATCATTTAGCTGAGATGAA+AGG | - | chr7_1:18227019-18227038 | None:intergenic | 30.0% | |
| AAGTGACTTATAATTTGGGA+CGG | - | chr7_1:18227095-18227114 | None:intergenic | 30.0% | |
| TCCCAAATTATAAGTCACTT+TGG | + | chr7_1:18227095-18227114 | Msa1012790:intron | 30.0% | |
| GCCAAAGTGACTTATAATTT+GGG | - | chr7_1:18227099-18227118 | None:intergenic | 30.0% | |
| TGCCAAAGTGACTTATAATT+TGG | - | chr7_1:18227100-18227119 | None:intergenic | 30.0% | |
| CTTTCCCATACAAATAATGA+AGG | - | chr7_1:18227194-18227213 | None:intergenic | 30.0% | |
| GAGAGAGTAATAAATAGCAA+AGG | + | chr7_1:18227237-18227256 | Msa1012790:intron | 30.0% | |
| !! | ATATTTTTGTCTGTTGGACA+TGG | + | chr7_1:18227348-18227367 | Msa1012790:intron | 30.0% |
| !! | CTGGTTCTTCTAAAATTGTT+AGG | + | chr7_1:18227374-18227393 | Msa1012790:intron | 30.0% |
| GTCTGTTTCCAAAATAAAGT+TGG | + | chr7_1:18227404-18227423 | Msa1012790:intron | 30.0% | |
| !! | CAGACTTACCAACTTTATTT+TGG | - | chr7_1:18227415-18227434 | None:intergenic | 30.0% |
| ! | TTTTTCCAATCTGAAAATGG+GGG | - | chr7_1:18227452-18227471 | None:intergenic | 30.0% |
| ! | CTTTTTCCAATCTGAAAATG+GGG | - | chr7_1:18227453-18227472 | None:intergenic | 30.0% |
| AGAAATACATGATCGTTATC+TGG | + | chr7_1:18227471-18227490 | Msa1012790:CDS | 30.0% | |
| !!! | TTATCTGGATGTTGTTTTGA+AGG | + | chr7_1:18227486-18227505 | Msa1012790:CDS | 30.0% |
| !!! | TATCTGGATGTTGTTTTGAA+GGG | + | chr7_1:18227487-18227506 | Msa1012790:CDS | 30.0% |
| ATACACATGCAGAAAAAAGA+GGG | - | chr7_1:18227549-18227568 | None:intergenic | 30.0% | |
| !! | TTTTGTGATAGTGTTACTGT+TGG | - | chr7_1:18227670-18227689 | None:intergenic | 30.0% |
| ACTAATAACACATGCACAAT+TGG | + | chr7_1:18227828-18227847 | Msa1012790:intron | 30.0% | |
| TTATAGTCATTGAGAGAATG+AGG | + | chr7_1:18228039-18228058 | Msa1012790:intron | 30.0% | |
| TATAGTCATTGAGAGAATGA+GGG | + | chr7_1:18228040-18228059 | Msa1012790:intron | 30.0% | |
| GAAATTACGATTGAGAATTG+AGG | + | chr7_1:18228127-18228146 | Msa1012790:intron | 30.0% | |
| !! | TTAGTAGCTTTGGATGTTAT+TGG | + | chr7_1:18228262-18228281 | Msa1012790:intron | 30.0% |
| TTAGCATAGAAGCTAGTATT+TGG | - | chr7_1:18228445-18228464 | None:intergenic | 30.0% | |
| GTTTAGAGAGTAATTACATG+CGG | - | chr7_1:18228549-18228568 | None:intergenic | 30.0% | |
| !! | ATGACACTTGTTTTCAAACT+AGG | - | chr7_1:18228613-18228632 | None:intergenic | 30.0% |
| !! | CTTATTTTCAGTGTGATTAC+TGG | - | chr7_1:18228762-18228781 | None:intergenic | 30.0% |
| AAACTCTCAACAAAGTAACA+TGG | - | chr7_1:18229011-18229030 | None:intergenic | 30.0% | |
| CTACTTCTAATACCGTTGTT+TGG | + | chr7_1:18220006-18220025 | Msa1012790:intron | 35.0% | |
| CACAAGGAAAAACAGAAGTT+GGG | - | chr7_1:18220107-18220126 | None:intergenic | 35.0% | |
| ACACAAGGAAAAACAGAAGT+TGG | - | chr7_1:18220108-18220127 | None:intergenic | 35.0% | |
| !! | AACTTCTGTTTTTCCTTGTG+TGG | + | chr7_1:18220107-18220126 | Msa1012790:intron | 35.0% |
| !! | TAATACCTTTAGCTCTTGCT+CGG | - | chr7_1:18220169-18220188 | None:intergenic | 35.0% |
| TGTTATTAGATCACTAGAGC+CGG | + | chr7_1:18220372-18220391 | Msa1012790:intron | 35.0% | |
| ! | ATAGTTTGTCTAGGTCTATC+CGG | - | chr7_1:18220394-18220413 | None:intergenic | 35.0% |
| TCTCAAATACTTAGCAGTGT+CGG | - | chr7_1:18220580-18220599 | None:intergenic | 35.0% | |
| CAGAAATAGGAATTCTGTCT+AGG | - | chr7_1:18220923-18220942 | None:intergenic | 35.0% | |
| ! | TTTGAAATGTGGACAAATGC+GGG | - | chr7_1:18221214-18221233 | None:intergenic | 35.0% |
| AAATAGCAGCTATAGTGTAG+CGG | + | chr7_1:18221291-18221310 | Msa1012790:intron | 35.0% | |
| AACACCAAAACAGTTTGTGT+AGG | + | chr7_1:18221546-18221565 | Msa1012790:intron | 35.0% | |
| ! | CATTCCTACACAAACTGTTT+TGG | - | chr7_1:18221553-18221572 | None:intergenic | 35.0% |
| !!! | TGACAAGAATGGTGGATTTT+TGG | + | chr7_1:18221595-18221614 | Msa1012790:intron | 35.0% |
| !!! | GACAAGAATGGTGGATTTTT+GGG | + | chr7_1:18221596-18221615 | Msa1012790:intron | 35.0% |
| !!! | CACACCCTTATTTTCAGAAA+TGG | - | chr7_1:18221740-18221759 | None:intergenic | 35.0% |
| ! | GTGCTTATAAACCAGTTTTG+TGG | + | chr7_1:18221949-18221968 | Msa1012790:intron | 35.0% |
| TCTCAGCCCAATTACAAATA+CGG | - | chr7_1:18222024-18222043 | None:intergenic | 35.0% | |
| ! | CAAAACTGACATTTGAAGTG+CGG | - | chr7_1:18222061-18222080 | None:intergenic | 35.0% |
| ! | CACTTCAAATGTCAGTTTTG+TGG | + | chr7_1:18222061-18222080 | Msa1012790:intron | 35.0% |
| !! | CTTCAAATGTCAGTTTTGTG+GGG | + | chr7_1:18222063-18222082 | Msa1012790:intron | 35.0% |
| GTAAGCTAGAATTAGGGATT+AGG | - | chr7_1:18222100-18222119 | None:intergenic | 35.0% | |
| ! | ATGCTCTAAATGTTTCGTCA+TGG | + | chr7_1:18222165-18222184 | Msa1012790:intron | 35.0% |
| TTAATATGGGTGGAGTAACA+AGG | - | chr7_1:18222207-18222226 | None:intergenic | 35.0% | |
| ! | AAAGTGTGGATTAATATGGG+TGG | - | chr7_1:18222217-18222236 | None:intergenic | 35.0% |
| !! | GATGTCTGAATTCTAAAGTG+TGG | - | chr7_1:18222231-18222250 | None:intergenic | 35.0% |
| ATATGGGACATATCTCTAGT+TGG | - | chr7_1:18222292-18222311 | None:intergenic | 35.0% | |
| !! | ATCTTACAAGGCAGTTTTGT+TGG | + | chr7_1:18222339-18222358 | Msa1012790:intron | 35.0% |
| !! | CTAAGCAACATTTTGAAAGC+AGG | - | chr7_1:18222417-18222436 | None:intergenic | 35.0% |
| ! | CTGCTTTCAAAATGTTGCTT+AGG | + | chr7_1:18222415-18222434 | Msa1012790:intron | 35.0% |
| ACAATGGAATCGTTCAAAAC+TGG | + | chr7_1:18222550-18222569 | Msa1012790:CDS | 35.0% | |
| CAATGGAATCGTTCAAAACT+GGG | + | chr7_1:18222551-18222570 | Msa1012790:CDS | 35.0% | |
| GTAGAATCTTACAGTCTTGA+GGG | - | chr7_1:18222741-18222760 | None:intergenic | 35.0% | |
| AGTAGAATCTTACAGTCTTG+AGG | - | chr7_1:18222742-18222761 | None:intergenic | 35.0% | |
| !!! | TTTTTTCGCGATTCTTTGAG+GGG | - | chr7_1:18222783-18222802 | None:intergenic | 35.0% |
| !!! | CATTTTTTCGCGATTCTTTG+AGG | - | chr7_1:18222785-18222804 | None:intergenic | 35.0% |
| CTCAAAGAATCGCGAAAAAA+TGG | + | chr7_1:18222783-18222802 | Msa1012790:CDS | 35.0% | |
| AAACATTGTCTCAACCTACA+AGG | - | chr7_1:18222881-18222900 | None:intergenic | 35.0% | |
| ATGTTAGAACAGCTTGGATT+TGG | - | chr7_1:18222933-18222952 | None:intergenic | 35.0% | |
| GTTCTAACATTATATGCCCA+AGG | + | chr7_1:18222943-18222962 | Msa1012790:CDS | 35.0% | |
| CCCAAGAGACCTAATAATAA+AGG | - | chr7_1:18223209-18223228 | None:intergenic | 35.0% | |
| AACATTTCTTTGGTTGTCTC+AGG | + | chr7_1:18223260-18223279 | Msa1012790:intron | 35.0% | |
| !! | GACTGGATTAGTTATTGACT+CGG | + | chr7_1:18223289-18223308 | Msa1012790:CDS | 35.0% |
| !! | ACTGGATTAGTTATTGACTC+GGG | + | chr7_1:18223290-18223309 | Msa1012790:CDS | 35.0% |
| ! | TATTGCAAAGTTGGTTATGG+AGG | + | chr7_1:18223538-18223557 | Msa1012790:intron | 35.0% |
| GTAAAACAGCCTATATGAGT+TGG | + | chr7_1:18223600-18223619 | Msa1012790:intron | 35.0% | |
| ! | AGATGAGTTGGATGTAACTT+CGG | + | chr7_1:18223653-18223672 | Msa1012790:intron | 35.0% |
| AACTCATCCATATCCAACTT+GGG | - | chr7_1:18223685-18223704 | None:intergenic | 35.0% | |
| TCATACTACAATCACAAAGG+GGG | + | chr7_1:18223763-18223782 | Msa1012790:intron | 35.0% | |
| TTTACTTACTCACACAACTC+TGG | + | chr7_1:18223852-18223871 | Msa1012790:intron | 35.0% | |
| CATAAAATATGCAAGGTCCA+GGG | + | chr7_1:18224067-18224086 | Msa1012790:intron | 35.0% | |
| !!! | TATTTTTTTTTGGTGGTGGC+CGG | - | chr7_1:18224101-18224120 | None:intergenic | 35.0% |
| TTGCATATCTCCAAACTTCA+TGG | - | chr7_1:18224177-18224196 | None:intergenic | 35.0% | |
| CCGTTCACCAAATATAATCT+TGG | + | chr7_1:18224359-18224378 | Msa1012790:intron | 35.0% | |
| AATGAATAGCCATCAACAAC+TGG | - | chr7_1:18224520-18224539 | None:intergenic | 35.0% | |
| ! | TCATTCGTTTTGTCAGATGA+GGG | - | chr7_1:18224543-18224562 | None:intergenic | 35.0% |
| ! | TTCATTCGTTTTGTCAGATG+AGG | - | chr7_1:18224544-18224563 | None:intergenic | 35.0% |
| ACAAAACGAATGAATGTAGC+TGG | + | chr7_1:18224550-18224569 | Msa1012790:CDS | 35.0% | |
| !! | TTGTTGATTTGCTTTCTAGG+AGG | + | chr7_1:18224593-18224612 | Msa1012790:CDS | 35.0% |
| !! | TGTTGATTTGCTTTCTAGGA+GGG | + | chr7_1:18224594-18224613 | Msa1012790:CDS | 35.0% |
| GAGGAAAGAAAATTGTGTTC+TGG | - | chr7_1:18224699-18224718 | None:intergenic | 35.0% | |
| CTTATTCACTGCATATCTTG+AGG | - | chr7_1:18224718-18224737 | None:intergenic | 35.0% | |
| AAGAGAAGCTGTGCTATATA+AGG | + | chr7_1:18224769-18224788 | Msa1012790:CDS | 35.0% | |
| TTGCAGTTATGACTACAAGA+GGG | + | chr7_1:18224865-18224884 | Msa1012790:intron | 35.0% | |
| TACAAGAGGGAATATCAGTT+GGG | + | chr7_1:18224878-18224897 | Msa1012790:CDS | 35.0% | |
| CTGTAATTACCCCAAATGAA+TGG | + | chr7_1:18225512-18225531 | Msa1012790:intron | 35.0% | |
| TAATTACCCCAAATGAATGG+AGG | + | chr7_1:18225515-18225534 | Msa1012790:intron | 35.0% | |
| AATAGTCCTCCATTCATTTG+GGG | - | chr7_1:18225524-18225543 | None:intergenic | 35.0% | |
| ! | TTTTGAATGGTCACTTCCAT+AGG | + | chr7_1:18225606-18225625 | Msa1012790:intron | 35.0% |
| TTTGAATGGTCACTTCCATA+GGG | + | chr7_1:18225607-18225626 | Msa1012790:intron | 35.0% | |
| ACTTTAATAACCCTTCCATC+TGG | - | chr7_1:18225719-18225738 | None:intergenic | 35.0% | |
| AGATGGAAGGGTTATTAAAG+TGG | + | chr7_1:18225718-18225737 | Msa1012790:CDS | 35.0% | |
| GATGGAAGGGTTATTAAAGT+GGG | + | chr7_1:18225719-18225738 | Msa1012790:CDS | 35.0% | |
| ! | AAAACTGATTTAGAGGAAGC+AGG | - | chr7_1:18225810-18225829 | None:intergenic | 35.0% |
| !!! | TTTTCTGGCTTATGATTGCT+TGG | + | chr7_1:18225957-18225976 | Msa1012790:intron | 35.0% |
| TCAATAAGTTCCTGCAAGAA+GGG | - | chr7_1:18225991-18226010 | None:intergenic | 35.0% | |
| ATCAATAAGTTCCTGCAAGA+AGG | - | chr7_1:18225992-18226011 | None:intergenic | 35.0% | |
| CAGGAACTTATTGATGTTGA+AGG | + | chr7_1:18225997-18226016 | Msa1012790:intron | 35.0% | |
| CTTATTGATGTTGAAGGTGA+TGG | + | chr7_1:18226003-18226022 | Msa1012790:CDS | 35.0% | |
| CAAGACATGGTATTTCACTT+TGG | + | chr7_1:18226129-18226148 | Msa1012790:intron | 35.0% | |
| AGGTGAAAAAGGATAAACTG+AGG | - | chr7_1:18226188-18226207 | None:intergenic | 35.0% | |
| TTTGGTCAAGTAGGTGAAAA+AGG | - | chr7_1:18226199-18226218 | None:intergenic | 35.0% | |
| GAGGATTTATTTGGTCAAGT+AGG | - | chr7_1:18226208-18226227 | None:intergenic | 35.0% | |
| CAAATATCTAAAAGCAGGTG+GGG | - | chr7_1:18226263-18226282 | None:intergenic | 35.0% | |
| !!! | CAACACATAGTTTTAAGTGG+AGG | + | chr7_1:18226441-18226460 | Msa1012790:CDS | 35.0% |
| ! | GAAATAAACAATTACCGGCT+TGG | - | chr7_1:18226489-18226508 | None:intergenic | 35.0% |
| GGCAATTAGAGCTAATGTAA+AGG | - | chr7_1:18226513-18226532 | None:intergenic | 35.0% | |
| AGAGTCATGCAATACATGTT+CGG | - | chr7_1:18226587-18226606 | None:intergenic | 35.0% | |
| GTAGTGAAGTGAGTTCTTAT+TGG | - | chr7_1:18226724-18226743 | None:intergenic | 35.0% | |
| TTGGCCAAAGAAAAATATGG+AGG | - | chr7_1:18226937-18226956 | None:intergenic | 35.0% | |
| ! | TTTTCCAATCTGAAAATGGG+GGG | - | chr7_1:18227451-18227470 | None:intergenic | 35.0% |
| AAAAAGAGGGAAAAGAACAG+TGG | - | chr7_1:18227536-18227555 | None:intergenic | 35.0% | |
| GATACACATGCAGAAAAAAG+AGG | - | chr7_1:18227550-18227569 | None:intergenic | 35.0% | |
| ! | AAACTGACTGAAGTCAGTTT+TGG | + | chr7_1:18227888-18227907 | Msa1012790:intron | 35.0% |
| TTAGCTACTTAGTGTGTGTT+TGG | + | chr7_1:18228346-18228365 | Msa1012790:intron | 35.0% | |
| ! | TGATTTTGTGTGTTGCAAAC+GGG | - | chr7_1:18228375-18228394 | None:intergenic | 35.0% |
| ! | GTGATTTTGTGTGTTGCAAA+CGG | - | chr7_1:18228376-18228395 | None:intergenic | 35.0% |
| !!! | AATCACGTTTGCACGTTTTT+TGG | + | chr7_1:18228390-18228409 | Msa1012790:intron | 35.0% |
| ACGAAGTTTGATGGAAATCA+CGG | - | chr7_1:18228480-18228499 | None:intergenic | 35.0% | |
| GTTTGCAAAACGAAGTTTGA+TGG | - | chr7_1:18228489-18228508 | None:intergenic | 35.0% | |
| ! | CCAGCAAAGACAAATTTTCT+TGG | - | chr7_1:18228636-18228655 | None:intergenic | 35.0% |
| CCAAGAAAATTTGTCTTTGC+TGG | + | chr7_1:18228633-18228652 | Msa1012790:intron | 35.0% | |
| !!! | ACCAGAGTTTTGGATTAACA+GGG | + | chr7_1:18228672-18228691 | Msa1012790:CDS | 35.0% |
| AGGGAAGATTATCTAGAAGA+AGG | + | chr7_1:18228691-18228710 | Msa1012790:CDS | 35.0% | |
| TGTTTAATGCAAGCTGTTGA+AGG | - | chr7_1:18228858-18228877 | None:intergenic | 35.0% | |
| ! | GTATTACCTCACACTTGTTT+TGG | - | chr7_1:18229114-18229133 | None:intergenic | 35.0% |
| !! | TATGTGAAGTGTGGTTTTGC+CGG | + | chr7_1:18220072-18220091 | Msa1012790:intron | 40.0% |
| !! | TTCTGTTTTTCCTTGTGTGG+TGG | + | chr7_1:18220110-18220129 | Msa1012790:intron | 40.0% |
| !! | TCTGTTTTTCCTTGTGTGGT+GGG | + | chr7_1:18220111-18220130 | Msa1012790:intron | 40.0% |
| CACAATATATGCATGATCCG+AGG | - | chr7_1:18220265-18220284 | None:intergenic | 40.0% | |
| ! | TGAGCTTAGCTTAGTTGGTA+AGG | - | chr7_1:18220294-18220313 | None:intergenic | 40.0% |
| TACCAACTAAGCTAAGCTCA+CGG | + | chr7_1:18220294-18220313 | Msa1012790:intron | 40.0% | |
| ! | TCATAGCTTTTCCCACTAAG+TGG | - | chr7_1:18220515-18220534 | None:intergenic | 40.0% |
| GTTAGTGTTTGTGTTGTGTC+CGG | - | chr7_1:18220554-18220573 | None:intergenic | 40.0% | |
| CGACTCTGAACAACTAAGAA+TGG | - | chr7_1:18220746-18220765 | None:intergenic | 40.0% | |
| TTGTCAAGTAGCTGCTATAG+TGG | + | chr7_1:18221364-18221383 | Msa1012790:intron | 40.0% | |
| GGCACTATAGCACTATTACT+TGG | + | chr7_1:18221385-18221404 | Msa1012790:intron | 40.0% | |
| ! | TTTAGTGTTGTTAAAGGCCG+TGG | + | chr7_1:18221510-18221529 | Msa1012790:intron | 40.0% |
| CCATTCTTGTCACACCAATA+CGG | - | chr7_1:18221587-18221606 | None:intergenic | 40.0% | |
| TATTGGTGTGACAAGAATGG+TGG | + | chr7_1:18221587-18221606 | Msa1012790:intron | 40.0% | |
| CTAATGTGGGTGGAATAACA+GGG | - | chr7_1:18221693-18221712 | None:intergenic | 40.0% | |
| ACTAATGTGGGTGGAATAAC+AGG | - | chr7_1:18221694-18221713 | None:intergenic | 40.0% | |
| ! | AAATTGTGGACTAATGTGGG+TGG | - | chr7_1:18221703-18221722 | None:intergenic | 40.0% |
| CTGATTTATGAGATGACACG+TGG | + | chr7_1:18221831-18221850 | Msa1012790:intron | 40.0% | |
| !!! | ACTTTTGGCTCTCAACAACT+AGG | - | chr7_1:18221906-18221925 | None:intergenic | 40.0% |
| ! | GTTGAGAGCCAAAAGTTGAT+TGG | + | chr7_1:18221910-18221929 | Msa1012790:intron | 40.0% |
| ! | TCGTGTCTCCAATCAACTTT+TGG | - | chr7_1:18221921-18221940 | None:intergenic | 40.0% |
| TCTAACTCATCCCACAAAAC+TGG | - | chr7_1:18221139-18221158 | None:intergenic | 40.0% | |
| CACTCGCTTAGATTCAGAAA+TGG | - | chr7_1:18222253-18222272 | None:intergenic | 40.0% | |
| ! | TAGGATATTGTTGTTGGCGA+AGG | + | chr7_1:18222483-18222502 | Msa1012790:intron | 40.0% |
| TGAACGATTCCATTGTTCAC+AGG | - | chr7_1:18222546-18222565 | None:intergenic | 40.0% | |
| ! | GAAAAGCATGTACCAGAGTT+AGG | - | chr7_1:18222705-18222724 | None:intergenic | 40.0% |
| CTCATCTCTATAAGCACCTT+GGG | - | chr7_1:18222962-18222981 | None:intergenic | 40.0% | |
| ACTCATCTCTATAAGCACCT+TGG | - | chr7_1:18222963-18222982 | None:intergenic | 40.0% | |
| GTGCTTATAGAGATGAGTGA+AGG | + | chr7_1:18222965-18222984 | Msa1012790:intron | 40.0% | |
| !! | ACTACAATGGTGCTATTGCT+AGG | + | chr7_1:18223374-18223393 | Msa1012790:intron | 40.0% |
| ! | AAAGTTGGTTATGGAGGAGT+TGG | + | chr7_1:18223544-18223563 | Msa1012790:intron | 40.0% |
| !! | ATGGATGGATTAAAGCCTGT+TGG | + | chr7_1:18223567-18223586 | Msa1012790:intron | 40.0% |
| !! | TGGATGGATTAAAGCCTGTT+GGG | + | chr7_1:18223568-18223587 | Msa1012790:intron | 40.0% |
| ! | AACAGCCTATATGAGTTGGA+TGG | + | chr7_1:18223604-18223623 | Msa1012790:intron | 40.0% |
| CAACTCATCCATATCCAACT+TGG | - | chr7_1:18223686-18223705 | None:intergenic | 40.0% | |
| ! | TGTTTTTCTAGGCCTACACA+TGG | - | chr7_1:18223794-18223813 | None:intergenic | 40.0% |
| GCATAAAATATGCAAGGTCC+AGG | + | chr7_1:18224066-18224085 | Msa1012790:intron | 40.0% | |
| !!! | ATTTTTTTTTGGTGGTGGCC+GGG | - | chr7_1:18224100-18224119 | None:intergenic | 40.0% |
| ! | CATGTCGCTTCCTTAAAACA+TGG | - | chr7_1:18224405-18224424 | None:intergenic | 40.0% |
| !!! | TGTTTTAAGGAAGCGACATG+TGG | + | chr7_1:18224405-18224424 | Msa1012790:intron | 40.0% |
| !! | GTTGATTTGCTTTCTAGGAG+GGG | + | chr7_1:18224595-18224614 | Msa1012790:CDS | 40.0% |
| !! | TTGATTTGCTTTCTAGGAGG+GGG | + | chr7_1:18224596-18224615 | Msa1012790:CDS | 40.0% |
| GAAGCTGTGCTATATAAGGT+TGG | + | chr7_1:18224773-18224792 | Msa1012790:intron | 40.0% | |
| CTTGCAGTTATGACTACAAG+AGG | + | chr7_1:18224864-18224883 | Msa1012790:intron | 40.0% | |
| CTACAAGAGGGAATATCAGT+TGG | + | chr7_1:18224877-18224896 | Msa1012790:CDS | 40.0% | |
| ACAAGAGGGAATATCAGTTG+GGG | + | chr7_1:18224879-18224898 | Msa1012790:CDS | 40.0% | |
| TCGGCAGTTACCTTAAGTTA+GGG | - | chr7_1:18225195-18225214 | None:intergenic | 40.0% | |
| ATCGGCAGTTACCTTAAGTT+AGG | - | chr7_1:18225196-18225215 | None:intergenic | 40.0% | |
| TGTGACATACATGAACCCTA+TGG | - | chr7_1:18225625-18225644 | None:intergenic | 40.0% | |
| TAGGGTTCATGTATGTCACA+AGG | + | chr7_1:18225625-18225644 | Msa1012790:intron | 40.0% | |
| TCTCTAAATCAGCTTCCAGA+TGG | + | chr7_1:18225701-18225720 | Msa1012790:intron | 40.0% | |
| TAAATCAGCTTCCAGATGGA+AGG | + | chr7_1:18225705-18225724 | Msa1012790:intron | 40.0% | |
| AAATCAGCTTCCAGATGGAA+GGG | + | chr7_1:18225706-18225725 | Msa1012790:intron | 40.0% | |
| !! | TTATTAAAGTGGGCACCGAA+AGG | + | chr7_1:18225729-18225748 | Msa1012790:CDS | 40.0% |
| TAGAGGAAGCAGGAGAAAAA+TGG | - | chr7_1:18225800-18225819 | None:intergenic | 40.0% | |
| AATAAGTTCCTGCAAGAAGG+GGG | - | chr7_1:18225989-18226008 | None:intergenic | 40.0% | |
| CAATAAGTTCCTGCAAGAAG+GGG | - | chr7_1:18225990-18226009 | None:intergenic | 40.0% | |
| !! | TGATGTTGAAGGTGATGGAA+TGG | + | chr7_1:18226008-18226027 | Msa1012790:CDS | 40.0% |
| ACACGGCTTGAGGATTTATT+TGG | - | chr7_1:18226217-18226236 | None:intergenic | 40.0% | |
| AAAACAACTAACACGGCTTG+AGG | - | chr7_1:18226227-18226246 | None:intergenic | 40.0% | |
| ATGTACAAGAGTGGGATGAT+GGG | + | chr7_1:18226776-18226795 | Msa1012790:intron | 40.0% | |
| !!! | AGAGTTCTAGATGGCACTTT+TGG | - | chr7_1:18226956-18226975 | None:intergenic | 40.0% |
| GACGGATGTAGTATATGCTT+AGG | - | chr7_1:18227077-18227096 | None:intergenic | 40.0% | |
| !!! | GTTTTGAAGGGCAACAAAGA+TGG | + | chr7_1:18227499-18227518 | Msa1012790:CDS | 40.0% |
| TGAAACTGAGCTTGACAAAC+AGG | + | chr7_1:18227748-18227767 | Msa1012790:intron | 40.0% | |
| !! | ACTGACTTCAGTCAGTTTTG+TGG | - | chr7_1:18227886-18227905 | None:intergenic | 40.0% |
| TGTGCTTGCAGGAATAATGA+AGG | + | chr7_1:18228190-18228209 | Msa1012790:CDS | 40.0% | |
| ! | TACTAGCTTCTATGCTAACG+TGG | + | chr7_1:18228447-18228466 | Msa1012790:intron | 40.0% |
| ! | GTCTTTGCTGGTTAAAACAC+AGG | + | chr7_1:18228645-18228664 | Msa1012790:intron | 40.0% |
| !!! | CACCAGAGTTTTGGATTAAC+AGG | + | chr7_1:18228671-18228690 | Msa1012790:CDS | 40.0% |
| TCCCTGTTAATCCAAAACTC+TGG | - | chr7_1:18228676-18228695 | None:intergenic | 40.0% | |
| TGTGAACACAATCACATCAG+AGG | + | chr7_1:18228791-18228810 | Msa1012790:three_prime_UTR | 40.0% | |
| CAGCTTGCATTAAACACTGT+TGG | + | chr7_1:18228862-18228881 | Msa1012790:three_prime_UTR | 40.0% | |
| !! | AACTAGCCTTCAGCTATACA+AGG | - | chr7_1:18228888-18228907 | None:intergenic | 40.0% |
| TATGAGCCAAAACAAGTGTG+AGG | + | chr7_1:18229105-18229124 | Msa1012790:three_prime_UTR | 40.0% | |
| ! | GATTTCAGTTTGAGTTCGCG+CGG | - | chr7_1:18219758-18219777 | None:intergenic | 45.0% |
| !! | ATGTGAAGTGTGGTTTTGCC+GGG | + | chr7_1:18220073-18220092 | Msa1012790:intron | 45.0% |
| AGAAGTTGGGAAATTCTCCC+CGG | - | chr7_1:18220094-18220113 | None:intergenic | 45.0% | |
| !! | CTGTTTTTCCTTGTGTGGTG+GGG | + | chr7_1:18220112-18220131 | Msa1012790:intron | 45.0% |
| GATTCTTCGTATCGGAGCAT+TGG | - | chr7_1:18220141-18220160 | None:intergenic | 45.0% | |
| CGGTAAGCGATTCTTCGTAT+CGG | - | chr7_1:18220149-18220168 | None:intergenic | 45.0% | |
| ACCAACTAAGCTAAGCTCAC+GGG | + | chr7_1:18220295-18220314 | Msa1012790:intron | 45.0% | |
| ! | ATGTAACCGACTCCACTTAG+TGG | + | chr7_1:18220500-18220519 | Msa1012790:intron | 45.0% |
| ! | TGTAACCGACTCCACTTAGT+GGG | + | chr7_1:18220501-18220520 | Msa1012790:intron | 45.0% |
| ! | CTTTTCCCACTAAGTGGAGT+CGG | - | chr7_1:18220509-18220528 | None:intergenic | 45.0% |
| AGTGGGAAAAGCTATGAAGC+AGG | + | chr7_1:18220518-18220537 | Msa1012790:intron | 45.0% | |
| GTGGGAAAAGCTATGAAGCA+GGG | + | chr7_1:18220519-18220538 | Msa1012790:intron | 45.0% | |
| TGATGGGACTGCACAGAAAT+AGG | - | chr7_1:18220936-18220955 | None:intergenic | 45.0% | |
| !! | TGGGTTCTGAGAACTCAACA+CGG | - | chr7_1:18221056-18221075 | None:intergenic | 45.0% |
| GGGATGAGTTAGACACTAAG+AGG | + | chr7_1:18221146-18221165 | Msa1012790:intron | 45.0% | |
| AGCTATAGTGTAGCGGCATT+TGG | + | chr7_1:18221298-18221317 | Msa1012790:intron | 45.0% | |
| ATGCTCTTCATCAGCCGTAT+TGG | + | chr7_1:18221570-18221589 | Msa1012790:intron | 45.0% | |
| ! | CCGTATTGGTGTGACAAGAA+TGG | + | chr7_1:18221584-18221603 | Msa1012790:intron | 45.0% |
| GTTGATTGGAGACACGACTA+AGG | + | chr7_1:18221924-18221943 | Msa1012790:intron | 45.0% | |
| ! | GGACATATCTCTAGTTGGTG+TGG | - | chr7_1:18222287-18222306 | None:intergenic | 45.0% |
| TGGGCAGTCTTCATCTTACA+AGG | + | chr7_1:18222327-18222346 | Msa1012790:intron | 45.0% | |
| ATATATCAAGCTGATGCCGC+AGG | - | chr7_1:18222518-18222537 | None:intergenic | 45.0% | |
| GGATGACATGTGTCATGTGT+GGG | + | chr7_1:18222572-18222591 | Msa1012790:CDS | 45.0% | |
| ! | CTCTGGTACATGCTTTTCCT+CGG | + | chr7_1:18222707-18222726 | Msa1012790:intron | 45.0% |
| ! | TTCTTTGAGGGGTTAAGAGG+TGG | - | chr7_1:18222772-18222791 | None:intergenic | 45.0% |
| ! | CGATTCTTTGAGGGGTTAAG+AGG | - | chr7_1:18222775-18222794 | None:intergenic | 45.0% |
| ! | AGCAAAAGGGAGCACATGTT+TGG | - | chr7_1:18222817-18222836 | None:intergenic | 45.0% |
| !! | TTAGTTATTGACTCGGGCGA+TGG | + | chr7_1:18223296-18223315 | Msa1012790:CDS | 45.0% |
| TTGGTTATGGAGGAGTTGGA+TGG | + | chr7_1:18223548-18223567 | Msa1012790:intron | 45.0% | |
| TTATGGAGGAGTTGGATGGA+TGG | + | chr7_1:18223552-18223571 | Msa1012790:intron | 45.0% | |
| TTTACTAGATGACGCCCAAC+AGG | - | chr7_1:18223585-18223604 | None:intergenic | 45.0% | |
| GAGTTGGATGTAACTTCGGA+CGG | + | chr7_1:18223657-18223676 | Msa1012790:intron | 45.0% | |
| GTCATGATGACACTGTCATC+TGG | + | chr7_1:18223726-18223745 | Msa1012790:intron | 45.0% | |
| ACTGTCATCTGGTACACAGA+AGG | + | chr7_1:18223737-18223756 | Msa1012790:intron | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | + | chr7_1:18224038-18224057 | Msa1012790:intron | 45.0% |
| !!! | TTTTTTTTTGGTGGTGGCCG+GGG | - | chr7_1:18224099-18224118 | None:intergenic | 45.0% |
| ATCCAGGTTCCAGTTGTTGA+TGG | + | chr7_1:18224508-18224527 | Msa1012790:intron | 45.0% | |
| ACTGGTCATGTACAGAGTTC+AGG | - | chr7_1:18224959-18224978 | None:intergenic | 45.0% | |
| TTGTTGTCGTCCACTTCCAT+AGG | + | chr7_1:18225568-18225587 | Msa1012790:intron | 45.0% | |
| GGTTCATGTATGTCACAAGG+TGG | + | chr7_1:18225628-18225647 | Msa1012790:intron | 45.0% | |
| ! | TTTTCACTCCGGTAGGTACT+TGG | + | chr7_1:18225771-18225790 | Msa1012790:intron | 45.0% |
| AATGGACACCAAGTACCTAC+CGG | - | chr7_1:18225782-18225801 | None:intergenic | 45.0% | |
| GGATATTGACAACCGGATGA+TGG | + | chr7_1:18226062-18226081 | Msa1012790:CDS | 45.0% | |
| ! | TGGAGCATCATACCATCATC+CGG | - | chr7_1:18226077-18226096 | None:intergenic | 45.0% |
| ! | GCTTGGTAATCCAGGATACA+TGG | - | chr7_1:18226472-18226491 | None:intergenic | 45.0% |
| TGTATCCTGGATTACCAAGC+CGG | + | chr7_1:18226472-18226491 | Msa1012790:CDS | 45.0% | |
| !! | AATTACCGGCTTGGTAATCC+AGG | - | chr7_1:18226480-18226499 | None:intergenic | 45.0% |
| CATGTACAAGAGTGGGATGA+TGG | + | chr7_1:18226775-18226794 | Msa1012790:intron | 45.0% | |
| TGTACAAGAGTGGGATGATG+GGG | + | chr7_1:18226777-18226796 | Msa1012790:intron | 45.0% | |
| ! | TCTTCCCCCCATTTTCAGAT+TGG | + | chr7_1:18227444-18227463 | Msa1012790:intron | 45.0% |
| !! | GGGCAACAAAGATGGATTGA+AGG | + | chr7_1:18227507-18227526 | Msa1012790:CDS | 45.0% |
| TGAGCTTGACAAACAGGACA+AGG | + | chr7_1:18227754-18227773 | Msa1012790:intron | 45.0% | |
| ATTTAGGTGGGAGAGAAGCA+AGG | - | chr7_1:18227804-18227823 | None:intergenic | 45.0% | |
| TACACCATGTGTTTCCTACG+TGG | - | chr7_1:18228158-18228177 | None:intergenic | 45.0% | |
| AGGAAACACATGGTGTACCT+TGG | + | chr7_1:18228161-18228180 | Msa1012790:CDS | 45.0% | |
| AAACACATGGTGTACCTTGG+TGG | + | chr7_1:18228164-18228183 | Msa1012790:CDS | 45.0% | |
| AAGGAATTGCTTGCCTGAGT+AGG | + | chr7_1:18228710-18228729 | Msa1012790:CDS | 45.0% | |
| GGAACTCGATAAGTCAAGCT+TGG | - | chr7_1:18228741-18228760 | None:intergenic | 45.0% | |
| !! | TGTTGGCCTTGTATAGCTGA+AGG | + | chr7_1:18228879-18228898 | Msa1012790:three_prime_UTR | 45.0% |
| !!! | AGTTTTTTTTTTTTTTTTTT+TGG | + | chr7_1:18225313-18225332 | Msa1012790:intron | 5.0% |
| !!! | GTTTTTTTTTTTTTTTTTTT+GGG | + | chr7_1:18225314-18225333 | Msa1012790:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTGAA+TGG | + | chr7_1:18225593-18225612 | Msa1012790:intron | 5.0% |
| !! | CATAAAAAATAAAATTAAAA+AGG | - | chr7_1:18225897-18225916 | None:intergenic | 5.0% |
| !!! | CTTTTTAATTTTATTTTTTA+TGG | + | chr7_1:18225895-18225914 | Msa1012790:intron | 5.0% |
| !! | ACAAAAATATATTAAAAAAA+TGG | - | chr7_1:18227338-18227357 | None:intergenic | 5.0% |
| AGATGTGAGCAGCAAGCACA+CGG | - | chr7_1:18219735-18219754 | None:intergenic | 50.0% | |
| TGTCCATGATGAGCTGCGAT+CGG | - | chr7_1:18219789-18219808 | None:intergenic | 50.0% | |
| AACGTCGTCGTTTGCGACAA+CGG | + | chr7_1:18219814-18219833 | Msa1012790:CDS | 50.0% | |
| !! | AGAGAGAGAGAGAGGTACTC+CGG | - | chr7_1:18219842-18219861 | None:intergenic | 50.0% |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr7_1:18219848-18219867 | None:intergenic | 50.0% | |
| !! | TGTGAAGTGTGGTTTTGCCG+GGG | + | chr7_1:18220074-18220093 | Msa1012790:intron | 50.0% |
| GCTTACCGAGCAAGAGCTAA+AGG | + | chr7_1:18220161-18220180 | Msa1012790:intron | 50.0% | |
| CCAACTAAGCTAAGCTCACG+GGG | + | chr7_1:18220296-18220315 | Msa1012790:intron | 50.0% | |
| AATTCAGTGTGTCGGACACC+AGG | + | chr7_1:18220609-18220628 | Msa1012790:intron | 50.0% | |
| !! | CAAACGCACTCTGAGACTTG+AGG | + | chr7_1:18221020-18221039 | Msa1012790:intron | 50.0% |
| CTGAGACTTGAGGTTTGCCT+TGG | + | chr7_1:18221030-18221049 | Msa1012790:intron | 50.0% | |
| AATGCAGGCAGTGTTGTCGA+TGG | - | chr7_1:18221628-18221647 | None:intergenic | 50.0% | |
| TCGACAACACTGCCTGCATT+TGG | + | chr7_1:18221628-18221647 | Msa1012790:intron | 50.0% | |
| TTTGGAGAACGGCCAAATGC+AGG | - | chr7_1:18221643-18221662 | None:intergenic | 50.0% | |
| TTGGCCGTTCTCCAAATGTC+CGG | + | chr7_1:18221647-18221666 | Msa1012790:intron | 50.0% | |
| ACGACCGGACATTTGGAGAA+CGG | - | chr7_1:18221654-18221673 | None:intergenic | 50.0% | |
| TTCTCCAAATGTCCGGTCGT+GGG | + | chr7_1:18221654-18221673 | Msa1012790:intron | 50.0% | |
| !! | TACATTCTGAAGCCCACGAC+CGG | - | chr7_1:18221669-18221688 | None:intergenic | 50.0% |
| TGGCTCTCAACAACTAGGCA+TGG | - | chr7_1:18221901-18221920 | None:intergenic | 50.0% | |
| GGGATGACATGTGTCATGTG+TGG | + | chr7_1:18222571-18222590 | Msa1012790:CDS | 50.0% | |
| TCTTGAGGGTTAATCTGCCG+AGG | - | chr7_1:18222727-18222746 | None:intergenic | 50.0% | |
| !! | GTTGTCTCAGGTTTGCTGAC+TGG | + | chr7_1:18223272-18223291 | Msa1012790:intron | 50.0% |
| ! | GACGGATCCCAAGTTGGATA+TGG | + | chr7_1:18223675-18223694 | Msa1012790:intron | 50.0% |
| GTGTCATCATGACACCCAAC+AGG | - | chr7_1:18223719-18223738 | None:intergenic | 50.0% | |
| CAAACTTCATGGAGCCGCTA+AGG | - | chr7_1:18224166-18224185 | None:intergenic | 50.0% | |
| CTTAGCGGCTCCATGAAGTT+TGG | + | chr7_1:18224164-18224183 | Msa1012790:intron | 50.0% | |
| AGCCATCAACAACTGGAACC+TGG | - | chr7_1:18224513-18224532 | None:intergenic | 50.0% | |
| ACCGGAGTGAAAAGAGCCTT+GGG | - | chr7_1:18225764-18225783 | None:intergenic | 50.0% | |
| TACCGGAGTGAAAAGAGCCT+TGG | - | chr7_1:18225765-18225784 | None:intergenic | 50.0% | |
| ! | AAGGCTCTTTTCACTCCGGT+AGG | + | chr7_1:18225764-18225783 | Msa1012790:intron | 50.0% |
| !! | AGGTGATGGAATGGCTGACA+TGG | + | chr7_1:18226017-18226036 | Msa1012790:CDS | 50.0% |
| TGTCTGTTGGACATGGTGTC+TGG | + | chr7_1:18227355-18227374 | Msa1012790:intron | 50.0% | |
| GAATTGAGGATCCACCACGT+AGG | + | chr7_1:18228141-18228160 | Msa1012790:CDS | 50.0% | |
| TCCACCACGTAGGAAACACA+TGG | + | chr7_1:18228151-18228170 | Msa1012790:CDS | 50.0% | |
| ACCATGTGTTTCCTACGTGG+TGG | - | chr7_1:18228155-18228174 | None:intergenic | 50.0% | |
| ! | CACAGGATGCACCAGAGTTT+TGG | + | chr7_1:18228662-18228681 | Msa1012790:intron | 50.0% |
| ATTGCTTGCCTGAGTAGGTG+TGG | + | chr7_1:18228715-18228734 | Msa1012790:CDS | 50.0% | |
| TGAGCAGCAAGCACACGGTT+GGG | - | chr7_1:18219730-18219749 | None:intergenic | 55.0% | |
| TGAGCTGCGATCGGTGGAAT+TGG | - | chr7_1:18219780-18219799 | None:intergenic | 55.0% | |
| GTCGTTTGCGACAACGGAAC+CGG | + | chr7_1:18219820-18219839 | Msa1012790:CDS | 55.0% | |
| ! | ATTGGTCTCCCCACCACACA+AGG | - | chr7_1:18220123-18220142 | None:intergenic | 55.0% |
| CCCCGTGAGCTTAGCTTAGT+TGG | - | chr7_1:18220299-18220318 | None:intergenic | 55.0% | |
| ! | TGAGAAGCACGGACACTCCT+CGG | - | chr7_1:18220646-18220665 | None:intergenic | 55.0% |
| !! | AGGAGTGTCCGTGCTTCTCA+GGG | + | chr7_1:18220646-18220665 | Msa1012790:intron | 55.0% |
| TCCGTGCTTCTCAGGGGAAA+AGG | + | chr7_1:18220653-18220672 | Msa1012790:intron | 55.0% | |
| ! | GCCTTTTCCCCTGAGAAGCA+CGG | - | chr7_1:18220657-18220676 | None:intergenic | 55.0% |
| GCTTCTCAGGGGAAAAGGCT+AGG | + | chr7_1:18220658-18220677 | Msa1012790:intron | 55.0% | |
| CTGAGAACTCAACACGGCCA+AGG | - | chr7_1:18221050-18221069 | None:intergenic | 55.0% | |
| GTTCTCCAAATGTCCGGTCG+TGG | + | chr7_1:18221653-18221672 | Msa1012790:intron | 55.0% | |
| ACTTCGGACGGATCCCAAGT+TGG | + | chr7_1:18223669-18223688 | Msa1012790:intron | 55.0% | |
| !! | AAGGGGGAAGCACCATGTGT+AGG | + | chr7_1:18223779-18223798 | Msa1012790:intron | 55.0% |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr7_1:18224036-18224055 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr7_1:18224033-18224052 | Msa1012790:intron | 55.0% | |
| AAGGTCCAGGGTTCAAACCC+CGG | + | chr7_1:18224079-18224098 | Msa1012790:intron | 55.0% | |
| ! | TTGCTTTCTAGGAGGGGGTG+AGG | + | chr7_1:18224601-18224620 | Msa1012790:intron | 55.0% |
| ! | TGCTTTCTAGGAGGGGGTGA+GGG | + | chr7_1:18224602-18224621 | Msa1012790:intron | 55.0% |
| CGGAGTGAAAAGAGCCTTGG+GGG | - | chr7_1:18225762-18225781 | None:intergenic | 55.0% | |
| CCGGAGTGAAAAGAGCCTTG+GGG | - | chr7_1:18225763-18225782 | None:intergenic | 55.0% | |
| ! | CCCCAAGGCTCTTTTCACTC+CGG | + | chr7_1:18225760-18225779 | Msa1012790:CDS | 55.0% |
| ! | GGTGTTTTCCCCCTTCTTGC+AGG | + | chr7_1:18225978-18225997 | Msa1012790:intron | 55.0% |
| !! | GGAGCTCTCAACGACTTGGT+AGG | - | chr7_1:18227783-18227802 | None:intergenic | 55.0% |
| GCAAGGAGCTCTCAACGACT+TGG | - | chr7_1:18227787-18227806 | None:intergenic | 55.0% | |
| AAGCTTGGCCACACCTACTC+AGG | - | chr7_1:18228726-18228745 | None:intergenic | 55.0% | |
| AAGCACACGGTTGGGTGGGT+GGG | - | chr7_1:18219722-18219741 | None:intergenic | 60.0% | |
| CAGCAAGCACACGGTTGGGT+GGG | - | chr7_1:18219726-18219745 | None:intergenic | 60.0% | |
| GTGAGCAGCAAGCACACGGT+TGG | - | chr7_1:18219731-18219750 | None:intergenic | 60.0% | |
| CCATGATGAGCTGCGATCGG+TGG | - | chr7_1:18219786-18219805 | None:intergenic | 60.0% | |
| CCACCGATCGCAGCTCATCA+TGG | + | chr7_1:18219783-18219802 | Msa1012790:exon | 60.0% | |
| TGAAGCAGGGACACGAACGC+CGG | + | chr7_1:18220532-18220551 | Msa1012790:intron | 60.0% | |
| ACCAGGACACGCCTTATCCG+AGG | + | chr7_1:18220626-18220645 | Msa1012790:intron | 60.0% | |
| TCCTCGGATAAGGCGTGTCC+TGG | - | chr7_1:18220630-18220649 | None:intergenic | 60.0% | |
| GCACGGACACTCCTCGGATA+AGG | - | chr7_1:18220640-18220659 | None:intergenic | 60.0% | |
| !! | GAGGAGTGTCCGTGCTTCTC+AGG | + | chr7_1:18220645-18220664 | Msa1012790:intron | 60.0% |
| ! | GGAGTGTCCGTGCTTCTCAG+GGG | + | chr7_1:18220647-18220666 | Msa1012790:intron | 60.0% |
| GCAGGCAGTGTTGTCGATGG+TGG | - | chr7_1:18221625-18221644 | None:intergenic | 60.0% | |
| GAAGCCCACGACCGGACATT+TGG | - | chr7_1:18221661-18221680 | None:intergenic | 60.0% | |
| GCGAAGGATGTGCAGACCTG+CGG | + | chr7_1:18222499-18222518 | Msa1012790:CDS | 60.0% | |
| !! | GGGCGATGGTGTCACTCATG+TGG | + | chr7_1:18223310-18223329 | Msa1012790:CDS | 60.0% |
| !! | AGTGGGCACCGAAAGGTTCC+AGG | + | chr7_1:18225736-18225755 | Msa1012790:CDS | 60.0% |
| CTTGGGGGCCTGGAACCTTT+CGG | - | chr7_1:18225747-18225766 | None:intergenic | 60.0% | |
| TGAAAAGAGCCTTGGGGGCC+TGG | - | chr7_1:18225757-18225776 | None:intergenic | 60.0% | |
| !! | GGAGGGAGCACCATGTATCC+TGG | + | chr7_1:18226459-18226478 | Msa1012790:CDS | 60.0% |
| ACACGGTTGGGTGGGTGGGT+GGG | - | chr7_1:18219718-18219737 | None:intergenic | 65.0% | |
| CAAGCACACGGTTGGGTGGG+TGG | - | chr7_1:18219723-18219742 | None:intergenic | 65.0% | |
| GCAGCAAGCACACGGTTGGG+TGG | - | chr7_1:18219727-18219746 | None:intergenic | 65.0% | |
| CGAAAGGTTCCAGGCCCCCA+AGG | + | chr7_1:18225745-18225764 | Msa1012790:CDS | 65.0% | |
| CTGCAAGCACAGCGCCACCA+AGG | - | chr7_1:18228181-18228200 | None:intergenic | 65.0% | |
| !! | CTTGGTGGCGCTGTGCTTGC+AGG | + | chr7_1:18228179-18228198 | Msa1012790:CDS | 65.0% |
| CACGGTTGGGTGGGTGGGTG+GGG | - | chr7_1:18219717-18219736 | None:intergenic | 70.0% | |
| CACACGGTTGGGTGGGTGGG+TGG | - | chr7_1:18219719-18219738 | None:intergenic | 70.0% | |
| GGTGGCCGGGGTTTGAACCC+TGG | - | chr7_1:18224087-18224106 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 18219694 | 18229137 | 18219694 | ID=Msa1012790;Name=Msa1012790 |
| chr7_1 | mRNA | 18219694 | 18229137 | 18219694 | ID=Msa1012790-mRNA-1;Parent=Msa1012790;Name=Msa1012790-mRNA-1;_AED=0.14;_eAED=0.14;_QI=108|1|1|1|1|1|14|390|352 |
| chr7_1 | exon | 18219694 | 18219843 | 18219694 | ID=Msa1012790-mRNA-1:exon:4558;Parent=Msa1012790-mRNA-1 |
| chr7_1 | exon | 18222486 | 18222620 | 18222486 | ID=Msa1012790-mRNA-1:exon:4559;Parent=Msa1012790-mRNA-1 |
| chr7_1 | exon | 18222733 | 18222804 | 18222733 | ID=Msa1012790-mRNA-1:exon:4560;Parent=Msa1012790-mRNA-1 |
| chr7_1 | exon | 18222886 | 18222964 | 18222886 | ID=Msa1012790-mRNA-1:exon:4561;Parent=Msa1012790-mRNA-1 |
| chr7_1 | exon | 18223282 | 18223331 | 18223282 | ID=Msa1012790-mRNA-1:exon:4562;Parent=Msa1012790-mRNA-1 |
| chr7_1 | exon | 18224514 | 18224617 | 18224514 | ID=Msa1012790-mRNA-1:exon:4563;Parent=Msa1012790-mRNA-1 |
| chr7_1 | exon | 18224722 | 18224790 | 18224722 | ID=Msa1012790-mRNA-1:exon:4564;Parent=Msa1012790-mRNA-1 |
| chr7_1 | exon | 18224871 | 18224934 | 18224871 | ID=Msa1012790-mRNA-1:exon:4565;Parent=Msa1012790-mRNA-1 |
| chr7_1 | exon | 18225713 | 18225781 | 18225713 | ID=Msa1012790-mRNA-1:exon:4566;Parent=Msa1012790-mRNA-1 |
| chr7_1 | exon | 18226000 | 18226083 | 18226000 | ID=Msa1012790-mRNA-1:exon:4567;Parent=Msa1012790-mRNA-1 |
| chr7_1 | exon | 18226435 | 18226493 | 18226435 | ID=Msa1012790-mRNA-1:exon:4568;Parent=Msa1012790-mRNA-1 |
| chr7_1 | exon | 18227462 | 18227528 | 18227462 | ID=Msa1012790-mRNA-1:exon:4569;Parent=Msa1012790-mRNA-1 |
| chr7_1 | exon | 18228128 | 18228211 | 18228128 | ID=Msa1012790-mRNA-1:exon:4570;Parent=Msa1012790-mRNA-1 |
| chr7_1 | exon | 18228667 | 18229137 | 18228667 | ID=Msa1012790-mRNA-1:exon:4571;Parent=Msa1012790-mRNA-1 |
| chr7_1 | five_prime_UTR | 18219694 | 18219801 | 18219694 | ID=Msa1012790-mRNA-1:five_prime_utr;Parent=Msa1012790-mRNA-1 |
| chr7_1 | CDS | 18219802 | 18219843 | 18219802 | ID=Msa1012790-mRNA-1:cds;Parent=Msa1012790-mRNA-1 |
| chr7_1 | CDS | 18222486 | 18222620 | 18222486 | ID=Msa1012790-mRNA-1:cds;Parent=Msa1012790-mRNA-1 |
| chr7_1 | CDS | 18222733 | 18222804 | 18222733 | ID=Msa1012790-mRNA-1:cds;Parent=Msa1012790-mRNA-1 |
| chr7_1 | CDS | 18222886 | 18222964 | 18222886 | ID=Msa1012790-mRNA-1:cds;Parent=Msa1012790-mRNA-1 |
| chr7_1 | CDS | 18223282 | 18223331 | 18223282 | ID=Msa1012790-mRNA-1:cds;Parent=Msa1012790-mRNA-1 |
| chr7_1 | CDS | 18224514 | 18224617 | 18224514 | ID=Msa1012790-mRNA-1:cds;Parent=Msa1012790-mRNA-1 |
| chr7_1 | CDS | 18224722 | 18224790 | 18224722 | ID=Msa1012790-mRNA-1:cds;Parent=Msa1012790-mRNA-1 |
| chr7_1 | CDS | 18224871 | 18224934 | 18224871 | ID=Msa1012790-mRNA-1:cds;Parent=Msa1012790-mRNA-1 |
| chr7_1 | CDS | 18225713 | 18225781 | 18225713 | ID=Msa1012790-mRNA-1:cds;Parent=Msa1012790-mRNA-1 |
| chr7_1 | CDS | 18226000 | 18226083 | 18226000 | ID=Msa1012790-mRNA-1:cds;Parent=Msa1012790-mRNA-1 |
| chr7_1 | CDS | 18226435 | 18226493 | 18226435 | ID=Msa1012790-mRNA-1:cds;Parent=Msa1012790-mRNA-1 |
| chr7_1 | CDS | 18227462 | 18227528 | 18227462 | ID=Msa1012790-mRNA-1:cds;Parent=Msa1012790-mRNA-1 |
| chr7_1 | CDS | 18228128 | 18228211 | 18228128 | ID=Msa1012790-mRNA-1:cds;Parent=Msa1012790-mRNA-1 |
| chr7_1 | CDS | 18228667 | 18228747 | 18228667 | ID=Msa1012790-mRNA-1:cds;Parent=Msa1012790-mRNA-1 |
| chr7_1 | three_prime_UTR | 18228748 | 18229137 | 18228748 | ID=Msa1012790-mRNA-1:three_prime_utr;Parent=Msa1012790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
