AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0924470


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0924470 MtrunA17_Chr6g0483631 92.055 365 15 4 1 356 1 360 0.0 625
Msa0924470 MtrunA17_Chr8g0392341 60.615 358 114 12 7 355 14 353 1.54e-133 385
Msa0924470 MtrunA17_Chr1g0153211 50.000 102 50 1 248 349 602 702 8.03e-29 117
Msa0924470 MtrunA17_Chr3g0138951 49.107 112 51 2 248 353 422 533 8.85e-29 117
Msa0924470 MtrunA17_Chr2g0316591 49.057 106 50 3 248 353 197 298 3.76e-27 109
Msa0924470 MtrunA17_Chr7g0263911 44.275 131 68 3 225 353 509 636 3.88e-27 112
Msa0924470 MtrunA17_Chr1g0147951 46.789 109 52 2 248 350 362 470 8.58e-27 110
Msa0924470 MtrunA17_Chr2g0316601 43.860 114 57 2 248 354 404 517 8.73e-27 110
Msa0924470 MtrunA17_Chr4g0044601 48.598 107 54 1 248 354 593 698 1.81e-25 107
Msa0924470 MtrunA17_Chr1g0181401 45.872 109 54 3 247 354 426 530 1.76e-24 104
Msa0924470 MtrunA17_Chr2g0315711 41.228 114 58 3 248 353 217 329 4.30e-22 95.5
Msa0924470 MtrunA17_Chr3g0124751 44.211 95 50 2 258 352 139 230 1.11e-18 84.3
Msa0924470 MtrunA17_Chr3g0086891 39.583 96 57 1 255 350 348 442 3.84e-18 85.5
Msa0924470 MtrunA17_Chr8g0352131 37.755 98 60 1 255 352 144 240 6.76e-17 79.3
Msa0924470 MtrunA17_Chr5g0401961 40.404 99 57 2 256 353 499 596 1.19e-16 81.3
Msa0924470 MtrunA17_Chr1g0211831 39.130 115 55 3 243 352 228 332 6.35e-16 77.8
Msa0924470 MtrunA17_Chr4g0032561 34.711 121 76 2 236 354 123 242 2.23e-15 75.1
Msa0924470 MtrunA17_Chr2g0315681 40.909 88 45 3 248 328 89 176 1.07e-13 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0924470 AT1G73760.1 41.534 378 157 14 4 349 15 360 3.27e-73 231
Msa0924470 AT1G17970.1 36.220 381 197 11 4 356 6 368 4.64e-59 195
Msa0924470 AT1G73760.2 37.671 292 121 13 4 263 15 277 5.96e-36 132
Msa0924470 AT4G31450.1 42.135 178 70 6 202 349 315 489 2.88e-34 132
Msa0924470 AT4G31450.2 42.135 178 70 6 202 349 315 489 2.88e-34 132
Msa0924470 AT2G15530.5 51.786 112 52 1 247 356 593 704 1.24e-30 123
Msa0924470 AT2G15530.3 51.786 112 52 1 247 356 593 704 1.24e-30 123
Msa0924470 AT2G15530.2 51.786 112 52 1 247 356 593 704 1.24e-30 123
Msa0924470 AT2G15530.1 51.786 112 52 1 247 356 593 704 1.24e-30 123
Msa0924470 AT2G15530.7 51.786 112 52 1 247 356 593 704 1.24e-30 123
Msa0924470 AT2G15530.6 51.786 112 52 1 247 356 571 682 1.36e-30 123
Msa0924470 AT4G34040.1 53.922 102 46 1 248 349 560 660 2.97e-30 122
Msa0924470 AT5G10650.1 46.226 106 53 1 248 349 411 516 1.05e-29 119
Msa0924470 AT5G10650.2 46.226 106 53 1 248 349 411 516 1.05e-29 119
Msa0924470 AT5G24870.3 47.368 114 54 2 248 356 404 516 1.79e-28 116
Msa0924470 AT5G24870.1 47.368 114 54 2 248 356 404 516 1.79e-28 116
Msa0924470 AT5G24870.2 47.368 114 54 2 248 356 404 516 1.79e-28 116
Msa0924470 AT5G42940.2 43.802 121 65 2 230 349 560 678 8.12e-28 115
Msa0924470 AT5G42940.1 43.802 121 65 2 230 349 560 678 8.12e-28 115
Msa0924470 AT2G15530.4 51.923 104 48 1 248 349 594 697 3.74e-27 113
Msa0924470 AT1G53190.2 38.346 133 72 2 232 354 356 488 9.74e-27 110
Msa0924470 AT1G53190.1 38.346 133 72 2 232 354 356 488 9.74e-27 110
Msa0924470 AT1G45180.2 47.107 121 61 2 230 349 467 585 4.12e-26 109
Msa0924470 AT3G15070.1 42.727 110 60 1 248 354 365 474 4.87e-26 108
Msa0924470 AT3G15070.2 42.727 110 60 1 248 354 365 474 4.87e-26 108
Msa0924470 AT1G45180.1 47.107 121 61 2 230 349 515 633 5.65e-26 109
Msa0924470 AT1G45180.3 47.107 121 61 2 230 349 515 633 5.65e-26 109
Msa0924470 AT1G45180.4 47.107 121 61 2 230 349 515 633 5.65e-26 109
Msa0924470 AT2G37150.10 44.167 120 59 3 235 353 426 538 2.55e-20 92.4
Msa0924470 AT2G37150.11 44.167 120 59 3 235 353 426 538 2.55e-20 92.4
Msa0924470 AT2G37150.9 44.167 120 59 3 235 353 426 538 2.55e-20 92.4
Msa0924470 AT2G37150.12 44.167 120 59 3 235 353 426 538 2.55e-20 92.4
Msa0924470 AT2G37150.5 44.167 120 59 3 235 353 426 538 2.55e-20 92.4
Msa0924470 AT2G37150.4 44.167 120 59 3 235 353 426 538 2.55e-20 92.4
Msa0924470 AT2G37150.2 44.167 120 59 3 235 353 426 538 2.55e-20 92.4
Msa0924470 AT2G37150.8 44.167 120 59 3 235 353 426 538 2.55e-20 92.4
Msa0924470 AT2G37150.7 44.167 120 59 3 235 353 426 538 2.55e-20 92.4
Msa0924470 AT2G37150.6 44.167 120 59 3 235 353 426 538 2.55e-20 92.4
Msa0924470 AT2G37150.1 44.167 120 59 3 235 353 426 538 2.55e-20 92.4
Msa0924470 AT2G37150.14 44.167 120 59 3 235 353 442 554 3.20e-20 92.4
Msa0924470 AT2G37150.13 44.167 120 59 3 235 353 442 554 3.20e-20 92.4
Msa0924470 AT2G37150.15 44.167 120 59 3 235 353 442 554 3.20e-20 92.4
Msa0924470 AT2G37150.3 44.167 120 59 3 235 353 479 591 5.30e-20 91.7
Msa0924470 AT3G63530.2 36.275 102 64 1 255 356 145 245 1.74e-16 78.6
Msa0924470 AT3G63530.1 36.275 102 64 1 255 356 145 245 1.74e-16 78.6
Msa0924470 AT5G67120.1 37.500 96 56 1 258 353 181 272 1.55e-15 76.3
Msa0924470 AT3G19910.1 36.364 99 60 1 254 352 237 332 2.66e-15 76.6
Msa0924470 AT1G36950.1 34.286 105 61 2 248 350 24 122 5.24e-14 70.9
Msa0924470 AT4G00070.1 35.052 97 55 2 248 342 88 178 1.36e-13 68.9
Msa0924470 AT3G47180.1 37.755 98 57 3 258 354 115 209 4.19e-13 68.2
Msa0924470 AT1G17970.2 30.172 232 122 9 4 209 6 223 4.04e-12 66.2
Msa0924470 AT5G52140.1 33.333 111 53 2 256 352 175 278 1.17e-11 65.1
Msa0924470 AT5G10650.3 35.556 90 51 2 248 330 411 500 4.35e-11 64.3

Find 80 sgRNAs with CRISPR-Local

Find 247 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGTAATGGTCTCTAAAT+TGG 0.154595 6_2:+66421736 Msa0924470:three_prime_UTR
AATTGGAAACATGTTATATT+TGG 0.157095 6_2:+66421718 Msa0924470:three_prime_UTR
GGGGTGCCTTAATTTGTTTC+TGG 0.163296 6_2:-66417556 None:intergenic
ATGACAAACTTTCTTGATTT+AGG 0.185666 6_2:-66419567 None:intergenic
TTGAAGATAATGAAATTTAA+AGG 0.218139 6_2:+66420625 Msa0924470:intron
GGGTGCCTTAATTTGTTTCT+GGG 0.291994 6_2:-66417555 None:intergenic
GCAGGAAGTGGATTGGATTA+AGG 0.294256 6_2:-66417613 None:intergenic
GGAAAAGAGAGTGGAGATAC+TGG 0.302656 6_2:-66417640 None:intergenic
CGTCGTGGATTAGAGTCTTT+TGG 0.304434 6_2:+66419622 Msa0924470:CDS
TGGCAGCGTTCATCTTATTT+TGG 0.312818 6_2:+66419529 Msa0924470:intron
TCAAGAGGAAAACTTGATAA+TGG 0.337233 6_2:+66418005 Msa0924470:CDS
AGTGGAGATACTGGATTTGC+AGG 0.347220 6_2:-66417631 None:intergenic
TGGCTTTCTAAGTGAAGAAT+TGG 0.350099 6_2:+66421701 Msa0924470:three_prime_UTR
AGAATTGGTTATGTGAAAAC+TGG 0.371746 6_2:+66421228 Msa0924470:CDS
TTTAAAGGAGCTAGACTAAT+GGG 0.372266 6_2:+66420640 Msa0924470:CDS
GTATGAATCAGATGATGAAT+TGG 0.374695 6_2:+66421472 Msa0924470:CDS
TTCATGTGTCCTGTGATAAC+AGG 0.376347 6_2:-66417522 None:intergenic
GTTTGGTGTGGACCTGGAAC+TGG 0.389369 6_2:+66417918 Msa0924470:CDS
CTTGAGCTGGGAGAAAGAAT+TGG 0.407176 6_2:+66421213 Msa0924470:CDS
CAGGATGTTTGGTGTGGACC+TGG 0.408347 6_2:+66417912 Msa0924470:CDS
AGTTTGATCAGTTTCTGAAA+TGG 0.416654 6_2:-66417577 None:intergenic
ACTATCATGTGTGGTTTCAT+TGG 0.416786 6_2:-66417682 None:intergenic
GTTTGATCAGTTTCTGAAAT+GGG 0.427276 6_2:-66417576 None:intergenic
GGATGTGTTGTTTGAGAAAG+TGG 0.430164 6_2:-66417661 None:intergenic
GATACTGGATTTGCAGGAAG+TGG 0.432978 6_2:-66417625 None:intergenic
TTGCAAACTCACTTGACAAA+TGG 0.433202 6_2:-66421343 None:intergenic
AAACATGTTATATTTGGTAA+TGG 0.434361 6_2:+66421724 Msa0924470:three_prime_UTR
TCATGAAATTGGTGTTTGAA+TGG 0.437198 6_2:+66421836 Msa0924470:three_prime_UTR
TCAGATAAGAATCCAGTTCC+AGG 0.441033 6_2:-66417930 None:intergenic
TGAAACATGATATGAAACTT+TGG 0.442477 6_2:-66417416 None:intergenic
GCTTCGAATGTTTCTTCTGA+TGG 0.448426 6_2:+66419667 Msa0924470:CDS
ATTTAAAGGAGCTAGACTAA+TGG 0.453341 6_2:+66420639 Msa0924470:CDS
CACTGCCGGTACATCACAAC+AGG 0.454642 6_2:+66417776 Msa0924470:CDS
TGGATTTGCAGGAAGTGGAT+TGG 0.454878 6_2:-66417620 None:intergenic
TATGAATCAGATGATGAATT+GGG 0.460080 6_2:+66421473 Msa0924470:CDS
GAAGTCCCAGAAACAAATTA+AGG 0.472152 6_2:+66417550 Msa0924470:CDS
ATTGGCAAGGGAAGAAGAAC+AGG 0.472226 6_2:+66417832 Msa0924470:CDS
AGAAAGAATGTTTCTTCAAG+AGG 0.472459 6_2:+66417990 Msa0924470:CDS
CGACTTCTTGCTTACAGACT+GGG 0.478209 6_2:-66421565 None:intergenic
TTATCACAGGACACATGAAA+TGG 0.480387 6_2:+66417526 Msa0924470:CDS
AGAGGACTCGGTTGCACTGC+CGG 0.486568 6_2:+66417762 Msa0924470:CDS
ACGACTTCTTGCTTACAGAC+TGG 0.490694 6_2:-66421566 None:intergenic
CACGTGATCAATTTAGAGAC+TGG 0.496333 6_2:+66420671 Msa0924470:CDS
CTATACATCATATTAAAATG+AGG 0.518502 6_2:-66421631 None:intergenic
CTTCCCTTGCCAATCTGCAG+AGG 0.521246 6_2:-66417823 None:intergenic
ATTTATAAGAAGATATTGAA+AGG 0.535284 6_2:-66417446 None:intergenic
TGAGAAAGTGGAAAAGAGAG+TGG 0.536359 6_2:-66417649 None:intergenic
TGCTGCTGCTGATGTTTCTG+TGG 0.541957 6_2:+66417953 Msa0924470:CDS
GTAACAGCAATTGCTTGAGC+TGG 0.542807 6_2:+66421200 Msa0924470:intron
TGATTCGATCCTCTGCAGAT+TGG 0.544628 6_2:+66417814 Msa0924470:CDS
ATCACAACAGGTGTCTGTAC+CGG 0.545837 6_2:+66417788 Msa0924470:CDS
TATACATCATATTAAAATGA+GGG 0.547407 6_2:-66421630 None:intergenic
TTCTTCTGATGGTATTGCTG+AGG 0.549937 6_2:+66419678 Msa0924470:CDS
AGACACCTGTTGTGATGTAC+CGG 0.555643 6_2:-66417781 None:intergenic
GGGTTACGCCACTCGAGTCA+AGG 0.559378 6_2:-66421596 None:intergenic
TGTAAATTATACTCAAGAGT+GGG 0.560300 6_2:+66421769 Msa0924470:three_prime_UTR
CGATCCTCTGCAGATTGGCA+AGG 0.563656 6_2:+66417819 Msa0924470:CDS
TTTACTGCATCAACCTTCAG+AGG 0.568041 6_2:+66417744 Msa0924470:CDS
TTGTAAATTATACTCAAGAG+TGG 0.569349 6_2:+66421768 Msa0924470:three_prime_UTR
TGTTGATAATATGTCATATG+AGG 0.570977 6_2:+66420702 Msa0924470:CDS
GAAAACTTGATAATGGTGAA+AGG 0.574739 6_2:+66418012 Msa0924470:CDS
TAAACCATGCCTGTTATCAC+AGG 0.578283 6_2:+66417513 Msa0924470:exon
GATCCTCTGCAGATTGGCAA+GGG 0.591294 6_2:+66417820 Msa0924470:CDS
ATGTCATGGTGTTGATGATG+TGG 0.591462 6_2:+66417884 Msa0924470:CDS
TTTGATCAGTTTCTGAAATG+GGG 0.598291 6_2:-66417575 None:intergenic
AGGAACAACAAAACATGTCA+TGG 0.600676 6_2:+66417870 Msa0924470:CDS
TAAAGGAGCTAGACTAATGG+GGG 0.604237 6_2:+66420642 Msa0924470:CDS
ACTTTCAGTGTATAAAACAA+TGG 0.605990 6_2:+66421522 Msa0924470:CDS
AGTGCAACCGAGTCCTCTGA+AGG 0.607271 6_2:-66417757 None:intergenic
GCATCAACCTTCAGAGGACT+CGG 0.610375 6_2:+66417750 Msa0924470:CDS
ATTCAAACACCAATTTCATG+AGG 0.618025 6_2:-66421834 None:intergenic
TTAAAGGAGCTAGACTAATG+GGG 0.619391 6_2:+66420641 Msa0924470:CDS
TAACAGCAATTGCTTGAGCT+GGG 0.635760 6_2:+66421201 Msa0924470:intron
GCAGAGGATCGAATCACTGC+CGG 0.636222 6_2:-66417807 None:intergenic
TGAAAGGATAACACATAGAG+AGG 0.638029 6_2:+66418028 Msa0924470:CDS
TGGTTCGACCTTGACTCGAG+TGG 0.639867 6_2:+66421588 Msa0924470:exon
ATACATCATATTAAAATGAG+GGG 0.646167 6_2:-66421629 None:intergenic
GTGTCCTGTGATAACAGGCA+TGG 0.666826 6_2:-66417517 None:intergenic
AGTCTGTAAGCAAGAAGTCG+TGG 0.680527 6_2:+66421568 Msa0924470:CDS
AAAGGAGCTAGACTAATGGG+GGG 0.733126 6_2:+66420643 Msa0924470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATAAAATTTTATATGTGT+TGG + chr6_2:66419509-66419528 Msa0924470:intron 10.0%
!!! ACTAAAGATATTATAATTTT+TGG - chr6_2:66420349-66420368 None:intergenic 10.0%
!! TTAAATATGAAACTTTAATT+TGG - chr6_2:66421372-66421391 None:intergenic 10.0%
!! ATTTATAAGAAGATATTGAA+AGG - chr6_2:66417449-66417468 None:intergenic 15.0%
!! ATCAATTAATCAAATAATCA+TGG - chr6_2:66418158-66418177 None:intergenic 15.0%
!!! ATTGATTTTTATGCATTATA+TGG + chr6_2:66418172-66418191 Msa0924470:intron 15.0%
!! AAACTAATAATCAAAATCAA+AGG - chr6_2:66418265-66418284 None:intergenic 15.0%
!!! ATTTTGATTATTAGTTTTGT+AGG + chr6_2:66418268-66418287 Msa0924470:intron 15.0%
!!! TTTTCTTTATTGATTTATTG+TGG + chr6_2:66419298-66419317 Msa0924470:intron 15.0%
!! AAATAAAAAACTTAACATCT+AGG - chr6_2:66419814-66419833 None:intergenic 15.0%
!!! AAAATACGAAATTTGAAATA+TGG + chr6_2:66419842-66419861 Msa0924470:intron 15.0%
!!! ATTTGAATACTTCTTTTTTT+TGG + chr6_2:66420372-66420391 Msa0924470:intron 15.0%
!!! TTTTATTTTCTCTCTATTTT+TGG + chr6_2:66420424-66420443 Msa0924470:intron 15.0%
!! AAGTAAGGTTTATTATATAA+TGG + chr6_2:66420483-66420502 Msa0924470:intron 15.0%
!! TTGAAGATAATGAAATTTAA+AGG + chr6_2:66420625-66420644 Msa0924470:intron 15.0%
!! TATACATCATATTAAAATGA+GGG - chr6_2:66421633-66421652 None:intergenic 15.0%
!!! TTCTATTCTTTTAAAACTTT+TGG + chr6_2:66421681-66421700 Msa0924470:three_prime_UTR 15.0%
!!! ATACGGTTAACATTATTTTT+TGG + chr6_2:66418212-66418231 Msa0924470:intron 20.0%
!!! GTCTTTTATTAATTCCATTT+TGG + chr6_2:66418318-66418337 Msa0924470:intron 20.0%
!! AAAAATGTCATTATTGCAAA+GGG - chr6_2:66418629-66418648 None:intergenic 20.0%
!! TAAAAATGTCATTATTGCAA+AGG - chr6_2:66418630-66418649 None:intergenic 20.0%
!! TAATATTGTAATCTTCACTA+TGG + chr6_2:66419011-66419030 Msa0924470:intron 20.0%
!! ATGTAAAATGTAACGAAATT+CGG - chr6_2:66419132-66419151 None:intergenic 20.0%
!!! ATTATAGGTTATTTGTTGTT+TGG + chr6_2:66420057-66420076 Msa0924470:intron 20.0%
!!! ATTTTTATCTTTAGTGATGT+AGG + chr6_2:66420133-66420152 Msa0924470:intron 20.0%
!!! ATTTGAAATTCATCAATATG+TGG + chr6_2:66420159-66420178 Msa0924470:intron 20.0%
!! AATTCTAGTAGATTAGTATA+TGG + chr6_2:66420313-66420332 Msa0924470:intron 20.0%
!!! TAAAAATAGAGAGCATTATT+GGG - chr6_2:66420739-66420758 None:intergenic 20.0%
!!! ATAAAAATAGAGAGCATTAT+TGG - chr6_2:66420740-66420759 None:intergenic 20.0%
!! ATACATCATATTAAAATGAG+GGG - chr6_2:66421632-66421651 None:intergenic 20.0%
!! CTATACATCATATTAAAATG+AGG - chr6_2:66421634-66421653 None:intergenic 20.0%
!! AATTGGAAACATGTTATATT+TGG + chr6_2:66421718-66421737 Msa0924470:three_prime_UTR 20.0%
!! AAACATGTTATATTTGGTAA+TGG + chr6_2:66421724-66421743 Msa0924470:three_prime_UTR 20.0%
!! TGAAATTTGAATACAAAAAG+AGG + chr6_2:66421898-66421917 Msa0924470:three_prime_UTR 20.0%
!!! TGTTCTTTTTTGTTCTGTTT+TGG - chr6_2:66417710-66417729 None:intergenic 25.0%
! TAAAAGACCATAATCTATCA+AGG - chr6_2:66418306-66418325 None:intergenic 25.0%
! TTTGTTCAATTTAAGCTAGT+AGG + chr6_2:66418586-66418605 Msa0924470:intron 25.0%
!! TAGCTTTTGAATATAGCTTA+TGG - chr6_2:66418700-66418719 None:intergenic 25.0%
! TAAGCTATATTCAAAAGCTA+AGG + chr6_2:66418700-66418719 Msa0924470:intron 25.0%
! AAGCTATATTCAAAAGCTAA+GGG + chr6_2:66418701-66418720 Msa0924470:intron 25.0%
! TCCTTGATTCATTATAATAG+AGG + chr6_2:66418820-66418839 Msa0924470:intron 25.0%
! CCTTGATTCATTATAATAGA+GGG + chr6_2:66418821-66418840 Msa0924470:intron 25.0%
! TTTCCGATATAAAAATGTCA+GGG + chr6_2:66418853-66418872 Msa0924470:intron 25.0%
!! TATCCCTGACATTTTTATAT+CGG - chr6_2:66418859-66418878 None:intergenic 25.0%
! TAAATTTACATCGTACAAGT+TGG + chr6_2:66418985-66419004 Msa0924470:intron 25.0%
! AAATTTACATCGTACAAGTT+GGG + chr6_2:66418986-66419005 Msa0924470:intron 25.0%
! CACTATGGTATATAAATACA+AGG + chr6_2:66419026-66419045 Msa0924470:intron 25.0%
! TTGTTATGAGTGATAGATTA+GGG - chr6_2:66419065-66419084 None:intergenic 25.0%
!! TTTGTTATGAGTGATAGATT+AGG - chr6_2:66419066-66419085 None:intergenic 25.0%
! ATCTATCACTCATAACAAAA+AGG + chr6_2:66419067-66419086 Msa0924470:intron 25.0%
!!! TACGTATGACTTTTAGAAAT+TGG - chr6_2:66419272-66419291 None:intergenic 25.0%
!!! ATCACTAGACTTATTTTCAA+GGG - chr6_2:66419326-66419345 None:intergenic 25.0%
! ATGACATACATGTTAATGAT+TGG + chr6_2:66419412-66419431 Msa0924470:intron 25.0%
! ATGACAAACTTTCTTGATTT+AGG - chr6_2:66419570-66419589 None:intergenic 25.0%
!!! TCAAGAAAGTTTGTCATTTT+TGG + chr6_2:66419573-66419592 Msa0924470:CDS 25.0%
!! TATCCTCTTTTCTTTGAATT+CGG + chr6_2:66419715-66419734 Msa0924470:intron 25.0%
! CGAGTTATTCATATCATTAT+AGG + chr6_2:66420042-66420061 Msa0924470:intron 25.0%
!!! GTTATTTGTTGTTTGGAATT+TGG + chr6_2:66420064-66420083 Msa0924470:intron 25.0%
!!! ACCATTCTAGCTTATTTTTT+TGG + chr6_2:66420288-66420307 Msa0924470:intron 25.0%
!!! CCATTCTAGCTTATTTTTTT+GGG + chr6_2:66420289-66420308 Msa0924470:intron 25.0%
!!! TTCTCTCTATTTTTGGATTA+TGG + chr6_2:66420431-66420450 Msa0924470:intron 25.0%
! ATACATAATACATCATGTCT+AGG + chr6_2:66420541-66420560 Msa0924470:intron 25.0%
!!! TGTTGATAATATGTCATATG+AGG + chr6_2:66420702-66420721 Msa0924470:CDS 25.0%
!! AAATTCTGGAAACAATCTAT+TGG + chr6_2:66420841-66420860 Msa0924470:intron 25.0%
! ATGAGATGAAAAACAACATA+AGG + chr6_2:66421262-66421281 Msa0924470:CDS 25.0%
! TATGAATCAGATGATGAATT+GGG + chr6_2:66421473-66421492 Msa0924470:CDS 25.0%
! ACTTTCAGTGTATAAAACAA+TGG + chr6_2:66421522-66421541 Msa0924470:CDS 25.0%
! TTGTAAATTATACTCAAGAG+TGG + chr6_2:66421768-66421787 Msa0924470:three_prime_UTR 25.0%
! TGTAAATTATACTCAAGAGT+GGG + chr6_2:66421769-66421788 Msa0924470:three_prime_UTR 25.0%
!! TTTTACTTTCCTCATGAAAT+TGG + chr6_2:66421825-66421844 Msa0924470:three_prime_UTR 25.0%
!! TTTGATCAGTTTCTGAAATG+GGG - chr6_2:66417578-66417597 None:intergenic 30.0%
!! GTTTGATCAGTTTCTGAAAT+GGG - chr6_2:66417579-66417598 None:intergenic 30.0%
! AGTTTGATCAGTTTCTGAAA+TGG - chr6_2:66417580-66417599 None:intergenic 30.0%
AGAAAGAATGTTTCTTCAAG+AGG + chr6_2:66417990-66418009 Msa0924470:CDS 30.0%
TCAAGAGGAAAACTTGATAA+TGG + chr6_2:66418005-66418024 Msa0924470:CDS 30.0%
!! GAAAACTTGATAATGGTGAA+AGG + chr6_2:66418012-66418031 Msa0924470:CDS 30.0%
CTTATGCTGGAATTGTAATA+CGG + chr6_2:66418195-66418214 Msa0924470:intron 30.0%
TTCTCTTTAACAAGCCAAAA+TGG - chr6_2:66418335-66418354 None:intergenic 30.0%
AAAAAATGCATTCACACACA+CGG + chr6_2:66418355-66418374 Msa0924470:intron 30.0%
TCATGTCTTAGTGTCATATT+CGG - chr6_2:66418384-66418403 None:intergenic 30.0%
AAAGTCTAATGTTGATGTGA+TGG + chr6_2:66418518-66418537 Msa0924470:intron 30.0%
!!! TAGTAGGACCGATTTTTTTT+TGG + chr6_2:66418602-66418621 Msa0924470:intron 30.0%
!!! AGTAGGACCGATTTTTTTTT+GGG + chr6_2:66418603-66418622 Msa0924470:intron 30.0%
! TGAGATGACATTTTCATACT+AGG + chr6_2:66418787-66418806 Msa0924470:intron 30.0%
! GAGATGACATTTTCATACTA+GGG + chr6_2:66418788-66418807 Msa0924470:intron 30.0%
CCCTCTATTATAATGAATCA+AGG - chr6_2:66418824-66418843 None:intergenic 30.0%
GTTTCCGATATAAAAATGTC+AGG + chr6_2:66418852-66418871 Msa0924470:intron 30.0%
TGAGCAGTCAAAAAATTATG+AGG + chr6_2:66418911-66418930 Msa0924470:intron 30.0%
GAGCAGTCAAAAAATTATGA+GGG + chr6_2:66418912-66418931 Msa0924470:intron 30.0%
AAAATTATGAGGGACCAAAA+TGG + chr6_2:66418922-66418941 Msa0924470:intron 30.0%
AATTTACATCGTACAAGTTG+GGG + chr6_2:66418987-66419006 Msa0924470:intron 30.0%
!! TCACTAGACTTATTTTCAAG+GGG - chr6_2:66419325-66419344 None:intergenic 30.0%
!! GATCACTAGACTTATTTTCA+AGG - chr6_2:66419327-66419346 None:intergenic 30.0%
!! TTTTTGTTTCGTGGTTGTTT+TGG + chr6_2:66419464-66419483 Msa0924470:intron 30.0%
!! TTAGAGTCTTTTGGAAATAG+TGG + chr6_2:66419631-66419650 Msa0924470:CDS 30.0%
AATCCGAATTCAAAGAAAAG+AGG - chr6_2:66419721-66419740 None:intergenic 30.0%
! CATTGTTGTTGTTGACAAAA+TGG + chr6_2:66419994-66420013 Msa0924470:intron 30.0%
CCCAAAAAAATAAGCTAGAA+TGG - chr6_2:66420292-66420311 None:intergenic 30.0%
!!! TCTCTATTTTTGGATTATGG+AGG + chr6_2:66420434-66420453 Msa0924470:intron 30.0%
ATTTAAAGGAGCTAGACTAA+TGG + chr6_2:66420639-66420658 Msa0924470:CDS 30.0%
TTTAAAGGAGCTAGACTAAT+GGG + chr6_2:66420640-66420659 Msa0924470:CDS 30.0%
TAATATTGTCATGATTACCG+AGG + chr6_2:66420763-66420782 Msa0924470:intron 30.0%
AATATTGTCATGATTACCGA+GGG + chr6_2:66420764-66420783 Msa0924470:intron 30.0%
!! AACAATCTATTGGCTTTCTA+AGG + chr6_2:66420851-66420870 Msa0924470:intron 30.0%
AACACAGTAGTATATGTATC+TGG + chr6_2:66420875-66420894 Msa0924470:intron 30.0%
AAACTATATTGCAGAGAATC+CGG - chr6_2:66420903-66420922 None:intergenic 30.0%
GATATAACAATCGTCACAAA+GGG - chr6_2:66421118-66421137 None:intergenic 30.0%
! AAAAGGTATGTCAATAGCTA+GGG - chr6_2:66421140-66421159 None:intergenic 30.0%
CATATGTTCATCGAAATTTG+TGG + chr6_2:66421171-66421190 Msa0924470:intron 30.0%
AGAATTGGTTATGTGAAAAC+TGG + chr6_2:66421228-66421247 Msa0924470:CDS 30.0%
GTATGAATCAGATGATGAAT+TGG + chr6_2:66421472-66421491 Msa0924470:CDS 30.0%
AAATGAGGGGAAAAACATTA+GGG - chr6_2:66421619-66421638 None:intergenic 30.0%
AAAATGAGGGGAAAAACATT+AGG - chr6_2:66421620-66421639 None:intergenic 30.0%
!! TTTGGTAATGGTCTCTAAAT+TGG + chr6_2:66421736-66421755 Msa0924470:three_prime_UTR 30.0%
ATTCAAACACCAATTTCATG+AGG - chr6_2:66421837-66421856 None:intergenic 30.0%
! TCATGAAATTGGTGTTTGAA+TGG + chr6_2:66421836-66421855 Msa0924470:three_prime_UTR 30.0%
TTGAATACAAAAAGAGGTGA+TGG + chr6_2:66421904-66421923 Msa0924470:three_prime_UTR 30.0%
TTATCACAGGACACATGAAA+TGG + chr6_2:66417526-66417545 Msa0924470:CDS 35.0%
GAAGTCCCAGAAACAAATTA+AGG + chr6_2:66417550-66417569 Msa0924470:CDS 35.0%
ACTATCATGTGTGGTTTCAT+TGG - chr6_2:66417685-66417704 None:intergenic 35.0%
!!! GTTTTGGTTACTATCATGTG+TGG - chr6_2:66417694-66417713 None:intergenic 35.0%
ACAGGAAAAAGAAGAACAGA+AGG + chr6_2:66417850-66417869 Msa0924470:CDS 35.0%
AGGAACAACAAAACATGTCA+TGG + chr6_2:66417870-66417889 Msa0924470:CDS 35.0%
!!! TGTTGATGATGTGGATTTTC+AGG + chr6_2:66417893-66417912 Msa0924470:CDS 35.0%
!! ATGTGGATTTTCAGGATGTT+TGG + chr6_2:66417901-66417920 Msa0924470:CDS 35.0%
TGAAAGGATAACACATAGAG+AGG + chr6_2:66418028-66418047 Msa0924470:CDS 35.0%
ATGCATTATATGGCTTATGC+TGG + chr6_2:66418182-66418201 Msa0924470:intron 35.0%
TCCTTGTCCTTGATAGATTA+TGG + chr6_2:66418296-66418315 Msa0924470:intron 35.0%
ACCATAATCTATCAAGGACA+AGG - chr6_2:66418300-66418319 None:intergenic 35.0%
TGACACTAAGACATGAACAT+TGG + chr6_2:66418388-66418407 Msa0924470:intron 35.0%
CAAAGGGCCCAAAAAAAAAT+CGG - chr6_2:66418613-66418632 None:intergenic 35.0%
! TTGTGAGTGAAGAACCATTT+TGG - chr6_2:66418939-66418958 None:intergenic 35.0%
! ATTTACATCGTACAAGTTGG+GGG + chr6_2:66418988-66419007 Msa0924470:intron 35.0%
AATTGTGTCTACTTCTCCAA+CGG - chr6_2:66419107-66419126 None:intergenic 35.0%
!! GTGTTTGTGTTTTTGTTTCG+TGG + chr6_2:66419455-66419474 Msa0924470:intron 35.0%
!!! AGCGTTCATCTTATTTTGGA+AGG + chr6_2:66419533-66419552 Msa0924470:intron 35.0%
TTTGTTGGATCAAGACCATA+TGG + chr6_2:66419788-66419807 Msa0924470:intron 35.0%
AACTTAACATCTAGGCCATA+TGG - chr6_2:66419806-66419825 None:intergenic 35.0%
! TATGGAGGTACGATTAACTA+AGG + chr6_2:66420449-66420468 Msa0924470:intron 35.0%
!! GATTAACTAAGGCTTGTTAG+TGG + chr6_2:66420460-66420479 Msa0924470:intron 35.0%
TTAAAGGAGCTAGACTAATG+GGG + chr6_2:66420641-66420660 Msa0924470:CDS 35.0%
AATTTGAACTCGTGATCTTC+AGG - chr6_2:66420826-66420845 None:intergenic 35.0%
AAGATCACGAGTTCAAATTC+TGG + chr6_2:66420827-66420846 Msa0924470:intron 35.0%
AACTATATTGCAGAGAATCC+GGG - chr6_2:66420902-66420921 None:intergenic 35.0%
AATATAGTTTCCACGCAGTA+AGG + chr6_2:66420913-66420932 Msa0924470:intron 35.0%
!! GACCATTGATTTAGATCATG+TGG + chr6_2:66421006-66421025 Msa0924470:intron 35.0%
GACCACATGATCTAAATCAA+TGG - chr6_2:66421011-66421030 None:intergenic 35.0%
GAGAGTAGATGTATGAAGAT+GGG - chr6_2:66421056-66421075 None:intergenic 35.0%
GGATATAACAATCGTCACAA+AGG - chr6_2:66421119-66421138 None:intergenic 35.0%
! CAAAAGGTATGTCAATAGCT+AGG - chr6_2:66421141-66421160 None:intergenic 35.0%
TTGCAAACTCACTTGACAAA+TGG - chr6_2:66421346-66421365 None:intergenic 35.0%
TGTATCTTTCTTGTGTGTTC+AGG + chr6_2:66421445-66421464 Msa0924470:intron 35.0%
TGGCTTTCTAAGTGAAGAAT+TGG + chr6_2:66421701-66421720 Msa0924470:three_prime_UTR 35.0%
TAAACCATGCCTGTTATCAC+AGG + chr6_2:66417513-66417532 Msa0924470:exon 40.0%
TTCATGTGTCCTGTGATAAC+AGG - chr6_2:66417525-66417544 None:intergenic 40.0%
!! GGGTGCCTTAATTTGTTTCT+GGG - chr6_2:66417558-66417577 None:intergenic 40.0%
TGAGAAAGTGGAAAAGAGAG+TGG - chr6_2:66417652-66417671 None:intergenic 40.0%
!! GGATGTGTTGTTTGAGAAAG+TGG - chr6_2:66417664-66417683 None:intergenic 40.0%
TTTACTGCATCAACCTTCAG+AGG + chr6_2:66417744-66417763 Msa0924470:CDS 40.0%
!! ATGTCATGGTGTTGATGATG+TGG + chr6_2:66417884-66417903 Msa0924470:CDS 40.0%
!! GATTTTCAGGATGTTTGGTG+TGG + chr6_2:66417906-66417925 Msa0924470:CDS 40.0%
TCAGATAAGAATCCAGTTCC+AGG - chr6_2:66417933-66417952 None:intergenic 40.0%
GCAACACAACAACATACATG+TGG - chr6_2:66418446-66418465 None:intergenic 40.0%
GTTGTGTTGCACACACATAT+CGG + chr6_2:66418456-66418475 Msa0924470:intron 40.0%
TGACTGCTCAATTCAATCTC+TGG - chr6_2:66418901-66418920 None:intergenic 40.0%
GTTGGAGAAGTAGACACAAT+TGG + chr6_2:66419106-66419125 Msa0924470:intron 40.0%
! ATTGGAAGCGTGTACGTATA+TGG - chr6_2:66419254-66419273 None:intergenic 40.0%
!! TGGCAGCGTTCATCTTATTT+TGG + chr6_2:66419529-66419548 Msa0924470:intron 40.0%
! GAAATTTTCACAACACGTCG+TGG + chr6_2:66419607-66419626 Msa0924470:CDS 40.0%
GCTTCGAATGTTTCTTCTGA+TGG + chr6_2:66419667-66419686 Msa0924470:CDS 40.0%
TTCTTCTGATGGTATTGCTG+AGG + chr6_2:66419678-66419697 Msa0924470:CDS 40.0%
GTCGTTGGATCAAAATTGCA+TGG - chr6_2:66419869-66419888 None:intergenic 40.0%
ATGTGGCTAATACGGAATGT+GGG + chr6_2:66419894-66419913 Msa0924470:intron 40.0%
GAATTCAGATTGTCTGTGGT+CGG - chr6_2:66419925-66419944 None:intergenic 40.0%
ACACGAATTCAGATTGTCTG+TGG - chr6_2:66419929-66419948 None:intergenic 40.0%
GAGACATTCATGATCATGCA+TGG + chr6_2:66419959-66419978 Msa0924470:intron 40.0%
!! AAGGCTTGTTAGTGGAAGTA+AGG + chr6_2:66420468-66420487 Msa0924470:intron 40.0%
TAAAGGAGCTAGACTAATGG+GGG + chr6_2:66420642-66420661 Msa0924470:CDS 40.0%
CACGTGATCAATTTAGAGAC+TGG + chr6_2:66420671-66420690 Msa0924470:CDS 40.0%
GTAGTATATGTATCTGGACC+CGG + chr6_2:66420881-66420900 Msa0924470:intron 40.0%
GGAGAGTAGATGTATGAAGA+TGG - chr6_2:66421057-66421076 None:intergenic 40.0%
CATATGAATCGCGATGCAAA+AGG - chr6_2:66421157-66421176 None:intergenic 40.0%
TAACAGCAATTGCTTGAGCT+GGG + chr6_2:66421201-66421220 Msa0924470:intron 40.0%
ATCTTTCTTGTGTGTTCAGG+AGG + chr6_2:66421448-66421467 Msa0924470:intron 40.0%
!! GGGGTGCCTTAATTTGTTTC+TGG - chr6_2:66417559-66417578 None:intergenic 45.0%
!! GCAGGAAGTGGATTGGATTA+AGG - chr6_2:66417616-66417635 None:intergenic 45.0%
TGGATTTGCAGGAAGTGGAT+TGG - chr6_2:66417623-66417642 None:intergenic 45.0%
GATACTGGATTTGCAGGAAG+TGG - chr6_2:66417628-66417647 None:intergenic 45.0%
AGTGGAGATACTGGATTTGC+AGG - chr6_2:66417634-66417653 None:intergenic 45.0%
GGAAAAGAGAGTGGAGATAC+TGG - chr6_2:66417643-66417662 None:intergenic 45.0%
AGACACCTGTTGTGATGTAC+CGG - chr6_2:66417784-66417803 None:intergenic 45.0%
ATCACAACAGGTGTCTGTAC+CGG + chr6_2:66417788-66417807 Msa0924470:CDS 45.0%
TGATTCGATCCTCTGCAGAT+TGG + chr6_2:66417814-66417833 Msa0924470:CDS 45.0%
ATTGGCAAGGGAAGAAGAAC+AGG + chr6_2:66417832-66417851 Msa0924470:CDS 45.0%
!! TACCGACTCTTAAGACCTGA+AGG - chr6_2:66418494-66418513 None:intergenic 45.0%
!!! CGTCGTGGATTAGAGTCTTT+TGG + chr6_2:66419622-66419641 Msa0924470:CDS 45.0%
TCTGATGGTATTGCTGAGGT+TGG + chr6_2:66419682-66419701 Msa0924470:intron 45.0%
GAATTCGGATTGTCTGCAGT+CGG + chr6_2:66419730-66419749 Msa0924470:intron 45.0%
TGCCAACCACAGAAATGCAA+GGG - chr6_2:66419760-66419779 None:intergenic 45.0%
GACCATCGATGTGGCTAATA+CGG + chr6_2:66419886-66419905 Msa0924470:intron 45.0%
TTCCGTATTAGCCACATCGA+TGG - chr6_2:66419891-66419910 None:intergenic 45.0%
GATGTGGCTAATACGGAATG+TGG + chr6_2:66419893-66419912 Msa0924470:intron 45.0%
TGTGGCTAATACGGAATGTG+GGG + chr6_2:66419895-66419914 Msa0924470:intron 45.0%
AAAGGAGCTAGACTAATGGG+GGG + chr6_2:66420643-66420662 Msa0924470:CDS 45.0%
AGCTAAGATTCCTTACTGCG+TGG - chr6_2:66420926-66420945 None:intergenic 45.0%
GTCGAGATCTGTAACTACGT+GGG + chr6_2:66421028-66421047 Msa0924470:intron 45.0%
GTAACAGCAATTGCTTGAGC+TGG + chr6_2:66421200-66421219 Msa0924470:intron 45.0%
CTTGAGCTGGGAGAAAGAAT+TGG + chr6_2:66421213-66421232 Msa0924470:CDS 45.0%
CGACTTCTTGCTTACAGACT+GGG - chr6_2:66421568-66421587 None:intergenic 45.0%
ACGACTTCTTGCTTACAGAC+TGG - chr6_2:66421569-66421588 None:intergenic 45.0%
AGTCTGTAAGCAAGAAGTCG+TGG + chr6_2:66421568-66421587 Msa0924470:CDS 45.0%
GTGTCCTGTGATAACAGGCA+TGG - chr6_2:66417520-66417539 None:intergenic 50.0%
GCATCAACCTTCAGAGGACT+CGG + chr6_2:66417750-66417769 Msa0924470:CDS 50.0%
GATCCTCTGCAGATTGGCAA+GGG + chr6_2:66417820-66417839 Msa0924470:CDS 50.0%
! TGCTGCTGCTGATGTTTCTG+TGG + chr6_2:66417953-66417972 Msa0924470:CDS 50.0%
CGCCTTCAGGTCTTAAGAGT+CGG + chr6_2:66418489-66418508 Msa0924470:intron 50.0%
TCTACTTCTCCAACGGCAGA+GGG - chr6_2:66419100-66419119 None:intergenic 50.0%
GGTAACCCCTTGCATTTCTG+TGG + chr6_2:66419751-66419770 Msa0924470:intron 50.0%
ACCCCTTGCATTTCTGTGGT+TGG + chr6_2:66419755-66419774 Msa0924470:intron 50.0%
GCCAACCACAGAAATGCAAG+GGG - chr6_2:66419759-66419778 None:intergenic 50.0%
GTGCCAACCACAGAAATGCA+AGG - chr6_2:66419761-66419780 None:intergenic 50.0%
TGATCCAACGACCATCGATG+TGG + chr6_2:66419877-66419896 Msa0924470:intron 50.0%
TTAGCCACATCGATGGTCGT+TGG - chr6_2:66419884-66419903 None:intergenic 50.0%
GTGGCTAATACGGAATGTGG+GGG + chr6_2:66419896-66419915 Msa0924470:intron 50.0%
AGCAACTTTAGCGTGTGTCG+AGG - chr6_2:66420794-66420813 None:intergenic 50.0%
CTCGTGATCTTCAGGTCACA+AGG - chr6_2:66420818-66420837 None:intergenic 50.0%
GGTCGAGATCTGTAACTACG+TGG + chr6_2:66421027-66421046 Msa0924470:intron 50.0%
TCTCCTCACATCCTACCTTG+TGG + chr6_2:66421072-66421091 Msa0924470:intron 50.0%
CTCCTCACATCCTACCTTGT+GGG + chr6_2:66421073-66421092 Msa0924470:intron 50.0%
AGTGCAACCGAGTCCTCTGA+AGG - chr6_2:66417760-66417779 None:intergenic 55.0%
CACTGCCGGTACATCACAAC+AGG + chr6_2:66417776-66417795 Msa0924470:CDS 55.0%
GCAGAGGATCGAATCACTGC+CGG - chr6_2:66417810-66417829 None:intergenic 55.0%
CGATCCTCTGCAGATTGGCA+AGG + chr6_2:66417819-66417838 Msa0924470:CDS 55.0%
CTTCCCTTGCCAATCTGCAG+AGG - chr6_2:66417826-66417845 None:intergenic 55.0%
!! CAGGATGTTTGGTGTGGACC+TGG + chr6_2:66417912-66417931 Msa0924470:CDS 55.0%
!! GTTTGGTGTGGACCTGGAAC+TGG + chr6_2:66417918-66417937 Msa0924470:CDS 55.0%
CGGACATCAAACACGCCTTC+AGG + chr6_2:66418476-66418495 Msa0924470:intron 55.0%
GTCTACTTCTCCAACGGCAG+AGG - chr6_2:66419101-66419120 None:intergenic 55.0%
GTTGGCACGTCAGCGTTTGT+TGG + chr6_2:66419773-66419792 Msa0924470:intron 55.0%
CTCCCACAAGGTAGGATGTG+AGG - chr6_2:66421078-66421097 None:intergenic 55.0%
GCACAATGCTCCCACAAGGT+AGG - chr6_2:66421086-66421105 None:intergenic 55.0%
GAGTGCACAATGCTCCCACA+AGG - chr6_2:66421090-66421109 None:intergenic 55.0%
! TGGTTCGACCTTGACTCGAG+TGG + chr6_2:66421588-66421607 Msa0924470:exon 55.0%
! AGAGGACTCGGTTGCACTGC+CGG + chr6_2:66417762-66417781 Msa0924470:CDS 60.0%
GGGTTACGCCACTCGAGTCA+AGG - chr6_2:66421599-66421618 None:intergenic 60.0%
GGAACTGCTCCCTCTGCCGT+TGG + chr6_2:66419088-66419107 Msa0924470:intron 65.0%
CGTGTGTCGAGGCTCGCCCT+CGG - chr6_2:66420783-66420802 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 66417417 66421964 66417417 ID=Msa0924470;Name=Msa0924470
chr6_2 mRNA 66417417 66421964 66417417 ID=Msa0924470-mRNA-1;Parent=Msa0924470;Name=Msa0924470-mRNA-1;_AED=0.17;_eAED=0.17;_QI=102|1|1|1|1|1|5|363|356
chr6_2 exon 66417417 66418049 66417417 ID=Msa0924470-mRNA-1:exon:10528;Parent=Msa0924470-mRNA-1
chr6_2 exon 66419535 66419699 66419535 ID=Msa0924470-mRNA-1:exon:10529;Parent=Msa0924470-mRNA-1
chr6_2 exon 66420631 66420723 66420631 ID=Msa0924470-mRNA-1:exon:10530;Parent=Msa0924470-mRNA-1
chr6_2 exon 66421207 66421353 66421207 ID=Msa0924470-mRNA-1:exon:10531;Parent=Msa0924470-mRNA-1
chr6_2 exon 66421467 66421964 66421467 ID=Msa0924470-mRNA-1:exon:10532;Parent=Msa0924470-mRNA-1
chr6_2 five_prime_UTR 66417417 66417518 66417417 ID=Msa0924470-mRNA-1:five_prime_utr;Parent=Msa0924470-mRNA-1
chr6_2 CDS 66417519 66418049 66417519 ID=Msa0924470-mRNA-1:cds;Parent=Msa0924470-mRNA-1
chr6_2 CDS 66419535 66419699 66419535 ID=Msa0924470-mRNA-1:cds;Parent=Msa0924470-mRNA-1
chr6_2 CDS 66420631 66420723 66420631 ID=Msa0924470-mRNA-1:cds;Parent=Msa0924470-mRNA-1
chr6_2 CDS 66421207 66421353 66421207 ID=Msa0924470-mRNA-1:cds;Parent=Msa0924470-mRNA-1
chr6_2 CDS 66421467 66421601 66421467 ID=Msa0924470-mRNA-1:cds;Parent=Msa0924470-mRNA-1
chr6_2 three_prime_UTR 66421602 66421964 66421602 ID=Msa0924470-mRNA-1:three_prime_utr;Parent=Msa0924470-mRNA-1
Gene Sequence

>Msa0924470

ATGCCTGTTATCACAGGACACATGAAATGGAGAAGTCCCAGAAACAAATTAAGGCACCCCATTTCAGAAACTGATCAAACTTCACAACTTTCTTCCTTAATCCAATCCACTTCCTGCAAATCCAGTATCTCCACTCTCTTTTCCACTTTCTCAAACAACACATCCAATGAAACCACACATGATAGTAACCAAAACAGAACAAAAAAGAACAACAACAATAGCAACTTTACTGCATCAACCTTCAGAGGACTCGGTTGCACTGCCGGTACATCACAACAGGTGTCTGTACCGGCAGTGATTCGATCCTCTGCAGATTGGCAAGGGAAGAAGAACAGGAAAAAGAAGAACAGAAGGAACAACAAAACATGTCATGGTGTTGATGATGTGGATTTTCAGGATGTTTGGTGTGGACCTGGAACTGGATTCTTATCTGATGCTGCTGCTGATGTTTCTGTGGATTGTGTTGTTGCAAGAAAGAATGTTTCTTCAAGAGGAAAACTTGATAATGGTGAAAGGATAACACATAGAGAGCGTTCATCTTATTTTGGAAGGCGCAGTGTAAACCTAAATCAAGAAAGTTTGTCATTTTTGGAAGATAATTCTGAAATTTTCACAACACGTCGTGGATTAGAGTCTTTTGGAAATAGTGGATTTTGTCGTAATGCTTCGAATGTTTCTTCTGATGGTATTGCTGAGATAATGAAATTTAAAGGAGCTAGACTAATGGGGGGACGATCACGTGATCAATTTAGAGACTGGAGACTTGATGTTGATAATATGTCATATGAGCAATTGCTTGAGCTGGGAGAAAGAATTGGTTATGTGAAAACTGGACTTAAAGAAGATGAGATGAAAAACAACATAAGGAAAATTAAGCTTTTGATTTCAAATGATTCATCAAAGCATCAAATAGACAAAAAGTGCACCATTTGTCAAGAGGAGTATGAATCAGATGATGAATTGGGTAGATTACACTGTGAACACTGCTATCACTTTCAGTGTATAAAACAATGGCTTGTGCTTAAAAACTTCTGCCCAGTCTGTAAGCAAGAAGTCGTGGTTCGACCTTGA

Protein sequence

>Msa0924470

MPVITGHMKWRSPRNKLRHPISETDQTSQLSSLIQSTSCKSSISTLFSTFSNNTSNETTHDSNQNRTKKNNNNSNFTASTFRGLGCTAGTSQQVSVPAVIRSSADWQGKKNRKKKNRRNNKTCHGVDDVDFQDVWCGPGTGFLSDAAADVSVDCVVARKNVSSRGKLDNGERITHRERSSYFGRRSVNLNQESLSFLEDNSEIFTTRRGLESFGNSGFCRNASNVSSDGIAEIMKFKGARLMGGRSRDQFRDWRLDVDNMSYEQLLELGERIGYVKTGLKEDEMKNNIRKIKLLISNDSSKHQIDKKCTICQEEYESDDELGRLHCEHCYHFQCIKQWLVLKNFCPVCKQEVVVRP*