AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0405570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0405570 MtrunA17_Chr5g0420091 96.721 61 2 0 1 61 1 61 1.73e-36 125
Msa0405570 MtrunA17_Chr7g0220111 85.938 64 9 0 1 64 1 64 5.11e-34 119
Msa0405570 MtrunA17_Chr8g0377561 93.103 58 4 0 1 58 1 58 3.61e-33 112
Msa0405570 MtrunA17_Chr7g0246381 86.885 61 8 0 1 61 1 61 3.79e-33 112
Msa0405570 MtrunA17_Chr6g0455511 91.667 60 5 0 1 60 1 60 4.38e-33 117
Msa0405570 MtrunA17_Chr4g0061671 86.885 61 8 0 1 61 1 61 5.83e-33 115
Msa0405570 MtrunA17_Chr3g0122251 84.375 64 10 0 1 64 1 64 8.74e-33 116
Msa0405570 MtrunA17_Chr8g0351051 91.525 59 5 0 1 59 1 59 2.42e-31 112
Msa0405570 MtrunA17_Chr2g0308251 75.000 60 15 0 1 60 1 60 4.94e-29 102
Msa0405570 MtrunA17_Chr3g0077501 77.049 61 14 0 1 61 1 61 8.08e-29 105
Msa0405570 MtrunA17_Chr3g0097101 73.770 61 16 0 1 61 16 76 3.76e-28 104
Msa0405570 MtrunA17_Chr2g0284911 75.410 61 15 0 1 61 16 76 3.78e-28 104
Msa0405570 MtrunA17_Chr8g0380021 73.770 61 16 0 1 61 17 77 1.33e-27 102
Msa0405570 MtrunA17_Chr4g0061691 76.667 60 14 0 1 60 1 60 4.32e-27 101
Msa0405570 MtrunA17_Chr6g0474371 74.603 63 16 0 1 63 1 63 7.02e-27 99.8
Msa0405570 MtrunA17_Chr1g0173161 71.014 69 17 2 1 67 1 68 1.51e-26 95.5
Msa0405570 MtrunA17_Chr7g0246431 76.667 60 14 0 1 60 1 60 1.86e-26 99.0
Msa0405570 MtrunA17_Chr8g0366231 72.131 61 17 0 1 61 1 61 2.01e-26 99.8
Msa0405570 MtrunA17_Chr4g0057151 73.770 61 16 0 1 61 1 61 2.53e-26 98.6
Msa0405570 MtrunA17_Chr8g0351041 72.131 61 17 0 1 61 1 61 3.47e-26 97.1
Msa0405570 MtrunA17_Chr8g0351031 72.131 61 17 0 1 61 1 61 8.85e-26 97.8
Msa0405570 MtrunA17_Chr5g0420081 70.492 61 18 0 1 61 1 61 1.32e-24 94.7
Msa0405570 MtrunA17_Chr1g0204111 74.576 59 15 0 1 59 17 75 1.38e-24 95.1
Msa0405570 MtrunA17_Chr1g0164791 57.333 75 25 1 1 75 1 68 1.88e-24 94.4
Msa0405570 MtrunA17_Chr5g0427921 64.407 59 21 0 1 59 1 59 2.17e-24 89.4
Msa0405570 MtrunA17_Chr4g0018421 58.537 82 26 2 1 74 1 82 7.75e-24 92.0
Msa0405570 MtrunA17_Chr4g0020221 70.000 60 18 0 1 60 1 60 1.15e-23 92.8
Msa0405570 MtrunA17_Chr2g0279821 65.574 61 21 0 1 61 1 61 1.19e-23 92.4
Msa0405570 MtrunA17_Chr3g0125241 64.407 59 21 0 1 59 26 84 6.57e-23 89.7
Msa0405570 MtrunA17_Chr7g0220121 68.333 60 19 0 1 60 1 60 7.18e-23 90.9
Msa0405570 MtrunA17_Chr3g0142191 58.571 70 26 1 1 67 1 70 1.46e-22 89.4
Msa0405570 MtrunA17_Chr4g0044071 38.983 118 52 1 1 118 1 98 2.59e-22 85.9
Msa0405570 MtrunA17_Chr5g0425191 59.375 64 26 0 1 64 1 64 8.17e-22 84.0
Msa0405570 MtrunA17_Chr5g0404951 62.712 59 22 0 1 59 1 59 1.95e-21 86.7
Msa0405570 MtrunA17_Chr4g0049541 60.656 61 24 0 1 61 1 61 5.03e-21 85.1
Msa0405570 MtrunA17_Chr5g0412461 64.407 59 21 0 1 59 1 59 1.51e-20 84.0
Msa0405570 MtrunA17_Chr5g0412271 64.407 59 21 0 1 59 1 59 1.57e-20 84.0
Msa0405570 MtrunA17_Chr5g0427401 43.478 92 50 1 1 90 1 92 1.88e-20 84.0
Msa0405570 MtrunA17_Chr1g0159661 59.322 59 24 0 1 59 1 59 5.55e-20 81.6
Msa0405570 MtrunA17_Chr5g0411691 59.016 61 25 0 1 61 1 61 1.18e-19 82.0
Msa0405570 MtrunA17_Chr3g0134451 36.054 147 73 5 1 147 1 126 2.24e-19 82.4
Msa0405570 MtrunA17_Chr4g0049901 52.459 61 29 0 1 61 27 87 1.11e-17 76.6
Msa0405570 MtrunA17_Chr1g0166611 70.213 47 14 0 13 59 17 63 5.40e-17 72.8
Msa0405570 MtrunA17_Chr2g0292791 57.143 56 24 0 2 57 9 64 5.39e-15 69.7
Msa0405570 MtrunA17_Chr5g0417661 51.613 62 29 1 1 62 56 116 5.80e-15 67.0
Msa0405570 MtrunA17_Chr1g0208581 55.357 56 25 0 2 57 9 64 1.20e-14 68.6
Msa0405570 MtrunA17_Chr1g0208561 53.571 56 26 0 2 57 9 64 3.43e-14 67.4
Msa0405570 MtrunA17_Chr3g0089141 53.571 56 26 0 2 57 9 64 3.96e-14 67.0
Msa0405570 MtrunA17_Chr2g0325971 51.786 56 27 0 2 57 9 64 6.24e-14 66.6
Msa0405570 MtrunA17_Chr3g0099421 57.143 56 24 0 2 57 34 89 7.56e-14 66.6
Msa0405570 MtrunA17_Chr8g0376821 52.632 57 27 0 1 57 1 57 1.14e-13 65.1
Msa0405570 MtrunA17_Chr1g0149391 57.143 56 24 0 2 57 9 64 1.46e-13 65.5
Msa0405570 MtrunA17_Chr3g0099411 53.571 56 26 0 2 57 9 64 2.11e-13 65.1
Msa0405570 MtrunA17_Chr8g0355091 53.571 56 26 0 2 57 9 64 2.73e-13 65.1
Msa0405570 MtrunA17_Chr5g0419601 56.140 57 25 0 1 57 8 64 2.84e-13 64.7
Msa0405570 MtrunA17_Chr1g0175611 50.877 57 28 0 1 57 1 57 3.08e-13 63.5
Msa0405570 MtrunA17_Chr1g0206721 53.571 56 26 0 2 57 9 64 3.18e-13 64.7
Msa0405570 MtrunA17_Chr1g0188671 53.571 56 26 0 2 57 47 102 3.19e-13 65.1
Msa0405570 MtrunA17_Chr8g0379021 51.852 54 26 0 2 55 12 65 3.23e-13 63.5
Msa0405570 MtrunA17_Chr1g0187361 53.571 56 26 0 2 57 9 64 3.28e-13 64.7
Msa0405570 MtrunA17_Chr1g0169761 47.297 74 38 1 1 73 1 74 3.31e-13 63.5
Msa0405570 MtrunA17_Chr1g0206701 53.571 56 26 0 2 57 9 64 3.34e-13 64.7
Msa0405570 MtrunA17_Chr2g0317451 55.357 56 25 0 2 57 9 64 4.83e-13 64.3
Msa0405570 MtrunA17_Chr2g0317481 55.357 56 25 0 2 57 9 64 4.93e-13 64.3
Msa0405570 MtrunA17_Chr2g0333981 52.727 55 26 0 1 55 11 65 5.20e-13 63.2
Msa0405570 MtrunA17_Chr8g0357771 50.877 57 28 0 1 57 1 57 5.84e-13 63.2
Msa0405570 MtrunA17_Chr1g0180591 49.123 57 29 0 1 57 1 57 8.66e-13 62.8
Msa0405570 MtrunA17_Chr4g0052061 49.180 61 31 0 1 61 1 61 9.34e-13 62.0
Msa0405570 MtrunA17_Chr1g0175601 50.877 57 28 0 1 57 1 57 1.05e-12 62.4
Msa0405570 MtrunA17_Chr5g0422941 55.357 56 25 0 2 57 9 64 1.76e-12 62.8
Msa0405570 MtrunA17_Chr4g0060841 50.943 53 26 0 1 53 1 53 1.84e-12 63.5
Msa0405570 MtrunA17_Chr5g0422421 55.357 56 25 0 2 57 9 64 2.73e-12 62.4
Msa0405570 MtrunA17_Chr4g0074101 49.123 57 29 0 1 57 1 57 3.13e-12 61.6
Msa0405570 MtrunA17_Chr1g0206991 50.000 56 28 0 2 57 9 64 5.04e-12 60.8
Msa0405570 MtrunA17_Chr4g0052081 47.458 59 31 0 1 59 1 59 1.34e-11 59.3
Msa0405570 MtrunA17_Chr2g0300421 50.000 56 28 0 2 57 9 64 2.57e-11 58.5
Msa0405570 MtrunA17_Chr2g0300441 50.000 58 27 1 2 57 7 64 5.86e-11 58.5
Msa0405570 MtrunA17_Chr3g0111841 52.000 50 24 0 8 57 2 51 8.91e-11 54.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0405570 AT2G03710.3 63.158 95 31 1 1 91 1 95 3.39e-34 118
Msa0405570 AT1G24260.3 72.500 80 22 0 1 80 1 80 1.71e-33 118
Msa0405570 AT1G24260.1 72.500 80 22 0 1 80 1 80 2.05e-33 118
Msa0405570 AT1G24260.2 72.500 80 22 0 1 80 1 80 2.12e-33 118
Msa0405570 AT5G15800.1 85.938 64 9 0 1 64 1 64 2.41e-33 118
Msa0405570 AT2G03710.2 63.158 95 31 1 1 91 1 95 3.05e-33 118
Msa0405570 AT2G03710.1 90.000 60 6 0 1 60 1 60 3.22e-33 118
Msa0405570 AT5G15800.2 85.938 64 9 0 1 64 1 64 7.23e-33 117
Msa0405570 AT3G02310.2 82.812 64 11 0 1 64 1 64 1.79e-32 114
Msa0405570 AT3G02310.1 82.812 64 11 0 1 64 1 64 4.40e-32 115
Msa0405570 AT2G45650.1 89.831 59 6 0 1 59 1 59 8.75e-31 111
Msa0405570 AT4G09960.2 75.410 61 15 0 1 61 1 61 5.84e-29 105
Msa0405570 AT4G09960.1 75.410 61 15 0 1 61 1 61 7.19e-29 106
Msa0405570 AT4G09960.6 75.410 61 15 0 1 61 2 62 7.67e-29 106
Msa0405570 AT4G09960.5 75.410 61 15 0 1 61 11 71 1.02e-28 105
Msa0405570 AT4G09960.3 75.410 61 15 0 1 61 27 87 2.38e-28 105
Msa0405570 AT4G18960.1 76.667 60 14 0 2 61 18 77 1.08e-27 103
Msa0405570 AT5G60910.1 73.770 61 16 0 1 61 1 61 1.39e-27 103
Msa0405570 AT2G42830.1 73.770 61 16 0 1 61 16 76 1.58e-27 103
Msa0405570 AT4G09960.4 75.410 61 15 0 1 61 96 156 1.62e-27 104
Msa0405570 AT2G42830.2 73.770 61 16 0 1 61 16 76 1.63e-27 103
Msa0405570 AT3G58780.1 73.770 61 16 0 1 61 16 76 1.89e-27 102
Msa0405570 AT3G58780.5 73.770 61 16 0 1 61 22 82 2.09e-27 102
Msa0405570 AT3G58780.2 75.000 60 15 0 1 60 16 75 2.74e-27 102
Msa0405570 AT3G58780.4 73.770 61 16 0 1 61 16 76 2.96e-27 103
Msa0405570 AT4G11880.2 74.603 63 16 0 1 63 1 63 3.51e-27 100
Msa0405570 AT4G11880.3 74.603 63 16 0 1 63 1 63 3.51e-27 100
Msa0405570 AT3G58780.3 73.770 61 16 0 1 61 16 76 3.77e-27 102
Msa0405570 AT3G61120.1 79.661 59 12 0 1 59 1 59 5.91e-27 101
Msa0405570 AT5G62165.14 71.667 60 17 0 1 60 1 60 7.31e-27 97.4
Msa0405570 AT4G11880.4 74.603 63 16 0 1 63 1 63 8.70e-27 100
Msa0405570 AT4G11880.1 74.603 63 16 0 1 63 1 63 8.70e-27 100
Msa0405570 AT5G62165.6 71.667 60 17 0 1 60 1 60 9.44e-27 98.6
Msa0405570 AT5G62165.9 71.667 60 17 0 1 60 1 60 9.44e-27 98.6
Msa0405570 AT5G62165.7 71.667 60 17 0 1 60 1 60 9.44e-27 98.6
Msa0405570 AT5G62165.8 71.667 60 17 0 1 60 1 60 9.44e-27 98.6
Msa0405570 AT5G62165.13 71.667 60 17 0 1 60 1 60 9.44e-27 98.6
Msa0405570 AT5G62165.17 71.667 60 17 0 1 60 1 60 1.07e-26 98.6
Msa0405570 AT5G62165.12 71.667 60 17 0 1 60 1 60 1.07e-26 98.6
Msa0405570 AT5G62165.11 71.667 60 17 0 1 60 1 60 1.07e-26 98.6
Msa0405570 AT1G26310.1 73.770 61 16 0 1 61 1 61 2.44e-26 100
Msa0405570 AT1G69120.2 70.492 61 18 0 1 61 1 61 2.78e-26 99.8
Msa0405570 AT4G22950.2 73.770 61 16 0 1 61 1 61 5.23e-26 97.1
Msa0405570 AT1G69120.1 70.492 61 18 0 1 61 1 61 7.10e-26 99.0
Msa0405570 AT5G62165.10 71.667 60 17 0 1 60 1 60 7.43e-26 97.4
Msa0405570 AT5G62165.4 71.667 60 17 0 1 60 1 60 7.43e-26 97.4
Msa0405570 AT5G62165.3 71.667 60 17 0 1 60 1 60 8.85e-26 97.8
Msa0405570 AT5G62165.1 71.667 60 17 0 1 60 1 60 8.85e-26 97.8
Msa0405570 AT5G62165.2 71.667 60 17 0 1 60 1 60 8.85e-26 97.8
Msa0405570 AT2G45660.2 72.131 61 17 0 1 61 1 61 1.44e-25 95.9
Msa0405570 AT4G22950.3 73.770 61 16 0 1 61 1 61 3.29e-25 96.3
Msa0405570 AT4G22950.1 73.770 61 16 0 1 61 1 61 3.29e-25 96.3
Msa0405570 AT2G45660.1 72.131 61 17 0 1 61 1 61 9.44e-25 95.1
Msa0405570 AT3G30260.1 68.852 61 19 0 1 61 1 61 1.04e-24 95.9
Msa0405570 AT3G57390.3 71.186 59 17 0 1 59 1 59 2.66e-24 94.4
Msa0405570 AT3G57390.1 71.186 59 17 0 1 59 1 59 5.12e-24 94.0
Msa0405570 AT5G10140.2 64.062 64 23 0 1 64 1 64 7.06e-24 91.7
Msa0405570 AT3G57230.2 65.574 61 21 0 1 61 1 61 7.79e-24 90.9
Msa0405570 AT5G10140.4 64.062 64 23 0 1 64 1 64 9.93e-24 91.7
Msa0405570 AT5G10140.1 64.062 64 23 0 1 64 1 64 1.12e-23 92.0
Msa0405570 AT5G10140.3 64.062 64 23 0 1 64 1 64 1.47e-23 91.3
Msa0405570 AT5G13790.2 71.186 59 17 0 1 59 1 59 2.08e-23 92.8
Msa0405570 AT5G13790.1 71.186 59 17 0 1 59 1 59 2.22e-23 92.8
Msa0405570 AT3G57230.1 65.574 61 21 0 1 61 1 61 3.04e-23 91.7
Msa0405570 AT3G57230.4 65.574 61 21 0 1 61 1 61 3.04e-23 91.7
Msa0405570 AT5G20240.2 53.012 83 32 1 1 83 1 76 6.59e-23 88.6
Msa0405570 AT5G65070.4 68.333 60 19 0 1 60 1 60 7.07e-23 88.6
Msa0405570 AT3G54340.1 62.712 59 22 0 1 59 1 59 8.80e-23 90.5
Msa0405570 AT5G65070.3 64.179 67 24 0 1 67 1 67 1.01e-22 90.1
Msa0405570 AT5G65070.1 68.333 60 19 0 1 60 1 60 2.17e-22 88.6
Msa0405570 AT5G20240.1 67.241 58 19 0 1 58 1 58 3.02e-22 88.6
Msa0405570 AT5G65070.5 68.333 60 19 0 1 60 1 60 3.15e-22 88.6
Msa0405570 AT2G14210.1 63.934 61 22 0 1 61 1 61 3.19e-22 89.0
Msa0405570 AT2G14210.2 63.934 61 22 0 1 61 1 61 3.98e-22 88.6
Msa0405570 AT5G65070.2 68.333 60 19 0 1 60 1 60 4.95e-22 88.6
Msa0405570 AT5G51860.2 65.000 60 21 0 1 60 1 60 6.86e-22 87.4
Msa0405570 AT5G51860.1 65.000 60 21 0 1 60 1 60 8.20e-22 87.4
Msa0405570 AT5G65080.2 61.429 70 27 0 1 70 8 77 1.04e-21 87.0
Msa0405570 AT4G37940.3 62.295 61 23 0 1 61 1 61 1.33e-21 85.9
Msa0405570 AT4G37940.4 62.295 61 23 0 1 61 1 61 1.48e-21 86.7
Msa0405570 AT5G65050.2 46.739 92 41 2 1 85 1 91 1.73e-21 85.9
Msa0405570 AT4G37940.1 62.295 61 23 0 1 61 1 61 1.79e-21 87.0
Msa0405570 AT5G23260.3 64.407 59 21 0 1 59 1 59 2.03e-21 87.0
Msa0405570 AT2G22540.3 52.439 82 37 1 1 80 1 82 2.89e-21 86.7
Msa0405570 AT2G22540.1 52.439 82 37 1 1 80 1 82 2.89e-21 86.7
Msa0405570 AT5G23260.2 64.407 59 21 0 1 59 1 59 2.98e-21 86.7
Msa0405570 AT5G51870.2 61.667 60 23 0 1 60 1 60 3.32e-21 84.7
Msa0405570 AT5G23260.1 64.407 59 21 0 1 59 17 75 3.53e-21 86.7
Msa0405570 AT1G22130.1 61.905 63 24 0 1 63 1 63 3.59e-21 87.8
Msa0405570 AT5G23260.4 64.407 59 21 0 1 59 17 75 4.20e-21 86.7
Msa0405570 AT5G51870.5 61.667 60 23 0 1 60 24 83 6.71e-21 84.7
Msa0405570 AT5G65050.1 61.667 60 23 0 1 60 1 60 7.26e-21 84.3
Msa0405570 AT1G77980.1 60.317 63 25 0 1 63 1 63 7.65e-21 87.0
Msa0405570 AT5G65050.5 61.667 60 23 0 1 60 1 60 7.84e-21 84.3
Msa0405570 AT5G65050.3 61.667 60 23 0 1 60 1 60 8.75e-21 84.3
Msa0405570 AT5G51870.1 61.667 60 23 0 1 60 1 60 1.17e-20 84.3
Msa0405570 AT1G71692.1 64.407 59 21 0 1 59 1 59 1.84e-20 84.0
Msa0405570 AT5G51870.4 61.667 60 23 0 1 60 1 60 2.04e-20 84.0
Msa0405570 AT5G51870.3 61.667 60 23 0 1 60 11 70 2.82e-20 84.0
Msa0405570 AT4G24540.1 47.826 92 35 2 1 88 1 83 3.83e-20 83.2
Msa0405570 AT5G65060.3 60.000 60 24 0 1 60 1 60 2.04e-19 80.5
Msa0405570 AT5G65060.2 60.000 60 24 0 1 60 1 60 2.30e-19 80.5
Msa0405570 AT5G65060.1 60.000 60 24 0 1 60 1 60 2.62e-19 80.5
Msa0405570 AT5G65080.3 65.000 60 21 0 1 60 8 67 3.70e-19 80.1
Msa0405570 AT2G22630.1 57.377 61 26 0 1 61 1 61 6.60e-19 80.1
Msa0405570 AT2G22630.2 57.377 61 26 0 1 61 1 61 6.60e-19 80.1
Msa0405570 AT1G31140.1 59.016 61 25 0 1 61 1 61 9.55e-19 79.3
Msa0405570 AT1G31140.2 59.016 61 25 0 1 61 1 61 9.60e-19 79.3
Msa0405570 AT2G22540.2 61.404 57 22 0 1 57 1 57 5.58e-18 77.8
Msa0405570 AT1G77950.3 51.316 76 29 2 1 76 1 68 2.97e-17 76.3
Msa0405570 AT1G77950.2 51.316 76 29 2 1 76 1 68 2.97e-17 76.3
Msa0405570 AT1G77950.1 51.316 76 29 2 1 76 1 68 2.97e-17 76.3
Msa0405570 AT1G77950.4 51.316 76 29 2 1 76 1 68 2.97e-17 76.3
Msa0405570 AT1G77080.11 58.730 63 26 0 1 63 1 63 3.09e-17 74.7
Msa0405570 AT1G77080.12 58.730 63 26 0 1 63 1 63 3.90e-17 73.6
Msa0405570 AT1G77080.5 58.730 63 26 0 1 63 1 63 4.58e-17 73.9
Msa0405570 AT1G77080.2 58.730 63 26 0 1 63 1 63 6.61e-17 73.9
Msa0405570 AT1G77080.4 58.730 63 26 0 1 63 1 63 6.84e-17 74.3
Msa0405570 AT1G77080.8 58.730 63 26 0 1 63 1 63 1.42e-16 73.9
Msa0405570 AT4G37435.1 56.452 62 27 0 1 62 1 62 2.18e-16 72.8
Msa0405570 AT2G03060.3 54.839 62 27 1 1 62 1 61 3.10e-14 68.9
Msa0405570 AT2G03060.7 54.839 62 27 1 1 62 1 61 3.10e-14 68.9
Msa0405570 AT2G03060.1 54.839 62 27 1 1 62 1 61 3.10e-14 68.9
Msa0405570 AT2G03060.2 54.839 62 27 1 1 62 1 61 3.46e-14 68.9
Msa0405570 AT1G18750.1 52.632 57 27 0 1 57 1 57 4.40e-14 68.6
Msa0405570 AT1G18750.4 52.632 57 27 0 1 57 1 57 4.44e-14 68.6
Msa0405570 AT1G18750.3 52.632 57 27 0 1 57 1 57 4.88e-14 68.6
Msa0405570 AT1G01530.1 54.386 57 26 0 1 57 6 62 7.41e-14 67.0
Msa0405570 AT4G36590.1 55.357 56 25 0 2 57 7 62 2.24e-12 62.8
Msa0405570 AT3G66656.1 47.368 57 30 0 1 57 1 57 6.76e-12 60.5
Msa0405570 AT1G72350.1 47.619 63 33 0 2 64 43 105 8.26e-12 61.2
Msa0405570 AT1G69540.2 50.943 53 26 0 1 53 1 53 1.42e-11 61.2
Msa0405570 AT1G69540.1 50.943 53 26 0 1 53 1 53 1.62e-11 61.2
Msa0405570 AT5G60440.1 51.786 56 27 0 2 57 7 62 1.96e-11 60.8
Msa0405570 AT1G65360.1 47.368 57 30 0 1 57 6 62 2.11e-11 60.1
Msa0405570 AT1G47760.1 53.061 49 23 0 1 49 1 49 3.11e-11 58.9
Msa0405570 AT2G34440.1 45.614 57 31 0 1 57 1 57 3.94e-11 58.5

Find 41 sgRNAs with CRISPR-Local

Find 477 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGCTCTTGGATTAGATTT+TGG 0.122775 3_2:+40568020 Msa0405570:CDS
CTAGATCCTCCTCAGCCTTT+TGG 0.233847 3_2:+40567897 Msa0405570:CDS
TGGTGTTCTGTCAAGGGACT+AGG 0.306885 3_2:+40567626 Msa0405570:CDS
TGCTGGAGGCCTCCTGCTCT+TGG 0.343880 3_2:+40568008 Msa0405570:CDS
ACATTTGCAAAGAGAAGAAA+TGG 0.365480 3_2:+40560440 Msa0405570:CDS
TTAGGTCTCCCTCAACCCTT+TGG 0.370407 3_2:+40567661 Msa0405570:CDS
TTCCTTCGGAGCCTTGCTGC+TGG 0.377776 3_2:+40567991 Msa0405570:CDS
TGTGTTGTCGGGGCTGTGTT+TGG 0.399851 3_2:+40567951 Msa0405570:CDS
TGGTGGTTCACTTACGCCTA+AGG 0.409171 3_2:+40567917 Msa0405570:CDS
AAGCAATAAAATAATGGGTA+GGG 0.438614 3_2:+40560370 None:intergenic
TTTAGGGTGGTGTTCTGTCA+AGG 0.458530 3_2:+40567619 Msa0405570:intron
GGGGAAAGGTAGAGCTAAAG+AGG 0.465681 3_2:+40560390 Msa0405570:CDS
ACGTTGTTGCTCGAAAGAGC+TGG 0.468361 3_2:+40568051 Msa0405570:CDS
GGTCTCCCTCAACCCTTTGG+TGG 0.473319 3_2:+40567664 Msa0405570:CDS
TTAGGGTGGTGTTCTGTCAA+GGG 0.482515 3_2:+40567620 Msa0405570:intron
CTCCAGCAGCAAGGCTCCGA+AGG 0.495913 3_2:-40567993 None:intergenic
ATGAGTTCTGCAGTGGCACT+AGG 0.499533 3_2:+40560546 Msa0405570:CDS
AAAGCAATAAAATAATGGGT+AGG 0.518687 3_2:+40560369 None:intergenic
TAAAATAATGGGTAGGGGAA+AGG 0.519037 3_2:+40560376 None:intergenic
CGTTGTTGCTCGAAAGAGCT+GGG 0.521530 3_2:+40568052 Msa0405570:CDS
GTGCAGATGCTTCGTGCTGA+CGG 0.528048 3_2:+40568076 Msa0405570:CDS
GGTGGTTCACTTACGCCTAA+GGG 0.533223 3_2:+40567918 Msa0405570:CDS
GTGTACCACCAAAGGGTTGA+GGG 0.533529 3_2:-40567669 None:intergenic
CCAAAATCTAATCCAAGAGC+AGG 0.539998 3_2:-40568020 None:intergenic
GGCGTAAGTGAACCACCAAA+AGG 0.545464 3_2:-40567912 None:intergenic
CTGTCAAGGGACTAGGGTCG+AGG 0.547661 3_2:+40567633 Msa0405570:CDS
AGCAATAAAATAATGGGTAG+GGG 0.548277 3_2:+40560371 None:intergenic
CTTCGGAGCCTTGCTGCTGG+AGG 0.551582 3_2:+40567994 Msa0405570:CDS
GGTGTTCTGTCAAGGGACTA+GGG 0.557314 3_2:+40567627 Msa0405570:CDS
CATAGCAGTGTACCACCAAA+GGG 0.558288 3_2:-40567676 None:intergenic
ACATAGCAGTGTACCACCAA+AGG 0.559154 3_2:-40567677 None:intergenic
AGTGTACCACCAAAGGGTTG+AGG 0.564855 3_2:-40567670 None:intergenic
AAGAAATGGGATGCTCAAGA+AGG 0.586753 3_2:+40560454 Msa0405570:CDS
GCAGGAGGCCTCCAGCAGCA+AGG 0.600539 3_2:-40568002 None:intergenic
GAACCACCAAAAGGCTGAGG+AGG 0.600882 3_2:-40567903 None:intergenic
CATTTGCAAAGAGAAGAAAT+GGG 0.608010 3_2:+40560441 Msa0405570:CDS
AGTGAACCACCAAAAGGCTG+AGG 0.623099 3_2:-40567906 None:intergenic
AAATCTAATCCAAGAGCAGG+AGG 0.640639 3_2:-40568017 None:intergenic
AAGCTCTATGAGTTCTGCAG+TGG 0.649168 3_2:+40560539 Msa0405570:CDS
GAGCAACTTCAGCTTCACAA+AGG 0.690983 3_2:-40560493 None:intergenic
AGAACTCATAGAGCTTTCCA+CGG 0.694795 3_2:-40560532 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAAAAAAAATTATTTT+GGG + chr3_2:40560693-40560712 Msa0405570:intron 0.0%
!!! TTTTTTTTTTTTGATAAATC+AGG - chr3_2:40560685-40560704 None:intergenic 10.0%
!! AATTATGAAAAATTAAAGAA+AGG + chr3_2:40561487-40561506 Msa0405570:intron 10.0%
!! ATAAATTATCATTCAATTTA+AGG + chr3_2:40561811-40561830 Msa0405570:intron 10.0%
!! TAAATTATCATTCAATTTAA+GGG + chr3_2:40561812-40561831 Msa0405570:intron 10.0%
!!! ATTACAAATAAATAACTTTT+AGG + chr3_2:40562911-40562930 Msa0405570:intron 10.0%
!! AAATAAGTATTTATTAATCA+CGG + chr3_2:40563329-40563348 Msa0405570:intron 10.0%
!! ATTTGTCTTATAATAAAAAT+AGG + chr3_2:40563386-40563405 Msa0405570:intron 10.0%
!! ATAATAAAAATAGGAAAAAA+TGG + chr3_2:40563395-40563414 Msa0405570:intron 10.0%
!!! AGTAAATTAATTTTATTTGA+TGG + chr3_2:40565357-40565376 Msa0405570:intron 10.0%
!!! ATTCTTTATTTTTTTTTTCT+TGG - chr3_2:40566610-40566629 None:intergenic 10.0%
!!! AAAATTATTTTGGGATTTTT+TGG + chr3_2:40560702-40560721 Msa0405570:intron 15.0%
!!! AAATTATTTTGGGATTTTTT+GGG + chr3_2:40560703-40560722 Msa0405570:intron 15.0%
!!! TTTATCTCTTTTTTTGTTTA+TGG + chr3_2:40560811-40560830 Msa0405570:intron 15.0%
!! TAATTTGATAAAATTCATCA+TGG - chr3_2:40560902-40560921 None:intergenic 15.0%
!! TAATAAAAAAATGAGATGAA+TGG + chr3_2:40561356-40561375 Msa0405570:intron 15.0%
!! ATTAAAACTAATTTACTACT+TGG - chr3_2:40561417-40561436 None:intergenic 15.0%
!!! AAATAAAACTTAGTTTTAGA+AGG - chr3_2:40561457-40561476 None:intergenic 15.0%
!! TTTGTTAAATAATAAGCTAT+TGG + chr3_2:40562266-40562285 Msa0405570:intron 15.0%
!! TATTATAATAAGATGTATAG+AGG - chr3_2:40562460-40562479 None:intergenic 15.0%
!! TTTATTTGTAATTGTGTTTA+TGG - chr3_2:40562903-40562922 None:intergenic 15.0%
!! AATAAGTATTTATTAATCAC+GGG + chr3_2:40563330-40563349 Msa0405570:intron 15.0%
!!! TTTTAACTTGATTTTAATGT+TGG + chr3_2:40564754-40564773 Msa0405570:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr3_2:40565114-40565133 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr3_2:40565115-40565134 None:intergenic 15.0%
!! ATATTTATCAGTTAAAGAAA+CGG - chr3_2:40565546-40565565 None:intergenic 15.0%
!!! TGATAAATATTTTTGTTTGA+TGG + chr3_2:40565556-40565575 Msa0405570:intron 15.0%
!! ATAATTGTACACATATATTT+CGG + chr3_2:40565976-40565995 Msa0405570:intron 15.0%
!!! ATCTTTTTTTTTTTTTGTAG+TGG - chr3_2:40566106-40566125 None:intergenic 15.0%
!! GAAATACAATTTACATATTA+AGG + chr3_2:40566554-40566573 Msa0405570:intron 15.0%
!!! TCTTTGACACTAATTATTTT+TGG + chr3_2:40560624-40560643 Msa0405570:intron 20.0%
!!! CTTTGACACTAATTATTTTT+GGG + chr3_2:40560625-40560644 Msa0405570:intron 20.0%
!! ATTATTGTTCTTTCTGTTTA+TGG + chr3_2:40561037-40561056 Msa0405570:intron 20.0%
!! ATTATTGTTCTTTCTGATTA+TGG + chr3_2:40561150-40561169 Msa0405570:intron 20.0%
!! TTTAAGCATATATCATGAAA+GGG - chr3_2:40561289-40561308 None:intergenic 20.0%
!!! TTTTAAGCATATATCATGAA+AGG - chr3_2:40561290-40561309 None:intergenic 20.0%
!! AAAAATTTAAGCTCCATAAA+TGG - chr3_2:40561542-40561561 None:intergenic 20.0%
!! TGTAAGAAAAAAGAAAACAT+TGG - chr3_2:40562036-40562055 None:intergenic 20.0%
!!! TTTTAAAAGTAAATCAGGTT+TGG - chr3_2:40562062-40562081 None:intergenic 20.0%
!!! AGTCTTTTTAAAAGTAAATC+AGG - chr3_2:40562067-40562086 None:intergenic 20.0%
!!! TATGAATAGAACTCTTTTTA+TGG + chr3_2:40562227-40562246 Msa0405570:intron 20.0%
!!! TGTGCGTTTTTTTTTATTAA+AGG - chr3_2:40562541-40562560 None:intergenic 20.0%
!!! TTATTTTTCATTTTTGAGAG+TGG + chr3_2:40562732-40562751 Msa0405570:intron 20.0%
!!! TATTTTTCATTTTTGAGAGT+GGG + chr3_2:40562733-40562752 Msa0405570:intron 20.0%
!! GGATTATTAAATATGATTTG+AGG - chr3_2:40562855-40562874 None:intergenic 20.0%
!! AAGAATCATATGAATTTGAA+CGG - chr3_2:40563437-40563456 None:intergenic 20.0%
!!! TTTTTCTCTATAGCTAAATA+AGG - chr3_2:40563817-40563836 None:intergenic 20.0%
!! AACTACAATTACCTTTAATT+AGG + chr3_2:40563920-40563939 Msa0405570:intron 20.0%
!!! AATCATTTTTTGACAACTTT+TGG + chr3_2:40563963-40563982 Msa0405570:intron 20.0%
!!! TTGTTTTTCTTACTTCTTAT+CGG - chr3_2:40564061-40564080 None:intergenic 20.0%
!! CAAAATATCATTACTCAATT+AGG + chr3_2:40564113-40564132 Msa0405570:intron 20.0%
!!! TTAATAGTTTTCTTATGTTG+CGG - chr3_2:40564433-40564452 None:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - chr3_2:40565045-40565064 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG - chr3_2:40565155-40565174 None:intergenic 20.0%
!!! TAAGAAAGGTGTATAAATAA+AGG - chr3_2:40565180-40565199 None:intergenic 20.0%
!! TGCATAATATATGTAAGATT+CGG - chr3_2:40565665-40565684 None:intergenic 20.0%
!! AAAAAATAAGCTGTCATAAA+TGG - chr3_2:40565857-40565876 None:intergenic 20.0%
!! TGATTAATTTACCATTCATT+GGG - chr3_2:40566419-40566438 None:intergenic 20.0%
!! TTGATTAATTTACCATTCAT+TGG - chr3_2:40566420-40566439 None:intergenic 20.0%
!! AATTGTATTTCGAAAAACTT+TGG - chr3_2:40566545-40566564 None:intergenic 20.0%
!! TATTGTACTAAGTAAATCTT+TGG + chr3_2:40566671-40566690 Msa0405570:intron 20.0%
!!! GTAAATCTTTGGTATATTTT+TGG + chr3_2:40566682-40566701 Msa0405570:intron 20.0%
!! ATCCAACAATATTATAGAAA+CGG + chr3_2:40566734-40566753 Msa0405570:intron 20.0%
!!! TCTGTTTCCAATTTTTTTTA+TGG - chr3_2:40566762-40566781 None:intergenic 20.0%
!!! ACTAATTATTTTTGGGATGT+CGG + chr3_2:40560632-40560651 Msa0405570:intron 25.0%
! GCTTAAAGATTATATCTTGT+TGG + chr3_2:40560751-40560770 Msa0405570:intron 25.0%
! CTTATTGTTCTTTCTGTTTA+TGG + chr3_2:40560925-40560944 Msa0405570:intron 25.0%
! ATACGCATATATATGATGAA+AGG - chr3_2:40561337-40561356 None:intergenic 25.0%
! AATAATAATATGCCTAAGTG+AGG + chr3_2:40561621-40561640 Msa0405570:intron 25.0%
!!! AATGCTGATTTATCTTTCTA+TGG - chr3_2:40561760-40561779 None:intergenic 25.0%
!!! TGAGAAACAAATGTTACTTT+TGG + chr3_2:40561889-40561908 Msa0405570:intron 25.0%
! GTAAGATGCATATCAAATAA+AGG - chr3_2:40561966-40561985 None:intergenic 25.0%
! TCTCAAAGAATTTAGTCTAA+TGG - chr3_2:40562192-40562211 None:intergenic 25.0%
! CTTATGCTATTAAACACTTT+AGG + chr3_2:40562290-40562309 Msa0405570:intron 25.0%
!! TTTTTCTCACAAGATTACAA+TGG - chr3_2:40562389-40562408 None:intergenic 25.0%
!! TTCTTTGAGAGAATGTATTT+AGG - chr3_2:40562430-40562449 None:intergenic 25.0%
!!! ATTTTTCATTTTTGAGAGTG+GGG + chr3_2:40562734-40562753 Msa0405570:intron 25.0%
!!! GAGCAATAATTTTTTTCTTG+AGG + chr3_2:40562768-40562787 Msa0405570:intron 25.0%
!! ATTAAATATGATTTGAGGCA+GGG - chr3_2:40562850-40562869 None:intergenic 25.0%
!! TATTAAATATGATTTGAGGC+AGG - chr3_2:40562851-40562870 None:intergenic 25.0%
!! TAATAATCCCAAGATTCTTT+TGG + chr3_2:40562866-40562885 Msa0405570:intron 25.0%
! AATTCAACCAAAAGAATCTT+GGG - chr3_2:40562876-40562895 None:intergenic 25.0%
! AAATTCAACCAAAAGAATCT+TGG - chr3_2:40562877-40562896 None:intergenic 25.0%
! TTTGTGGAGAAAAATTCATT+TGG - chr3_2:40563197-40563216 None:intergenic 25.0%
! TACTTAGAACATCTTTAATG+AGG + chr3_2:40563250-40563269 Msa0405570:intron 25.0%
! TCATTTCTCTTCCTAATTAA+AGG - chr3_2:40563934-40563953 None:intergenic 25.0%
! AAAACAATAGAGAGAGAAAA+AGG - chr3_2:40564035-40564054 None:intergenic 25.0%
! GATAAGAAGTAAGAAAAACA+AGG + chr3_2:40564060-40564079 Msa0405570:intron 25.0%
!!! GACACATGGTTATTTTTTTT+TGG + chr3_2:40564177-40564196 Msa0405570:intron 25.0%
!!! TGGTTATTTTTTTTTGGTAG+TGG + chr3_2:40564183-40564202 Msa0405570:intron 25.0%
! CATTGAGTTTATATGAGTAT+TGG - chr3_2:40564476-40564495 None:intergenic 25.0%
! TAATAAAAAACCATGTGGTT+TGG - chr3_2:40564891-40564910 None:intergenic 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - chr3_2:40565046-40565065 None:intergenic 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG - chr3_2:40565067-40565086 None:intergenic 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG - chr3_2:40565068-40565087 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG - chr3_2:40565156-40565175 None:intergenic 25.0%
! TGTATAAATAAAGGAGAAAG+TGG - chr3_2:40565171-40565190 None:intergenic 25.0%
! CAAAGTAGGTCAATTAAATT+GGG + chr3_2:40565215-40565234 Msa0405570:intron 25.0%
!!! ATATTGTCCTTTTAAAAACG+TGG + chr3_2:40565305-40565324 Msa0405570:intron 25.0%
!!! TATTGTCCTTTTAAAAACGT+GGG + chr3_2:40565306-40565325 Msa0405570:intron 25.0%
! ATTTGGACCTTATTAATTAC+TGG + chr3_2:40565399-40565418 Msa0405570:intron 25.0%
!! TAGCAACATTTTACTATGTT+TGG + chr3_2:40565429-40565448 Msa0405570:intron 25.0%
! TTTAAAAATAACCACGACAA+AGG - chr3_2:40565496-40565515 None:intergenic 25.0%
!!! ATTTTTGTTTGATGGTATTC+CGG + chr3_2:40565564-40565583 Msa0405570:intron 25.0%
!!! ACACTAACAGCATTTTTTTT+TGG + chr3_2:40565622-40565641 Msa0405570:intron 25.0%
!!! AGCATTTTTTTTTGGTGTTT+GGG + chr3_2:40565630-40565649 Msa0405570:intron 25.0%
! GCATAATATATGTAAGATTC+GGG - chr3_2:40565664-40565683 None:intergenic 25.0%
!! TGACAGCATTTTACTATTAT+TGG + chr3_2:40565715-40565734 Msa0405570:intron 25.0%
!!! TTTTAAAATAACCACGACAA+AGG - chr3_2:40565782-40565801 None:intergenic 25.0%
! ATTTGCATATTTATGGCTAT+TGG - chr3_2:40566337-40566356 None:intergenic 25.0%
!! GTTGCTAATTTGCATATTTA+TGG - chr3_2:40566344-40566363 None:intergenic 25.0%
! TGTTTGAATATATAGAAGAG+AGG + chr3_2:40566476-40566495 Msa0405570:intron 25.0%
! AAAATTCGCCAAAATATCTA+AGG + chr3_2:40566709-40566728 Msa0405570:intron 25.0%
!! TTGGATATCCTTAGATATTT+TGG - chr3_2:40566720-40566739 None:intergenic 25.0%
! ATCCGTTTCTATAATATTGT+TGG - chr3_2:40566739-40566758 None:intergenic 25.0%
! AACGGATCCATAAAAAAAAT+TGG + chr3_2:40566752-40566771 Msa0405570:intron 25.0%
! TACCTACAATACATCTTAAA+TGG + chr3_2:40566910-40566929 Msa0405570:intron 25.0%
! ACCTACAATACATCTTAAAT+GGG + chr3_2:40566911-40566930 Msa0405570:intron 25.0%
!! TTTTGCAGTGTTTATGTTTT+AGG + chr3_2:40567729-40567748 Msa0405570:intron 25.0%
ACATTTGCAAAGAGAAGAAA+TGG + chr3_2:40560440-40560459 Msa0405570:CDS 30.0%
CATTTGCAAAGAGAAGAAAT+GGG + chr3_2:40560441-40560460 Msa0405570:CDS 30.0%
! TTTTTGATAAATCAGGAGAG+TGG - chr3_2:40560678-40560697 None:intergenic 30.0%
!!! ATTTTGGGATTTTTTGGGTT+TGG + chr3_2:40560708-40560727 Msa0405570:intron 30.0%
GTTTATGGTTCTTTGTTCTT+TGG + chr3_2:40560826-40560845 Msa0405570:intron 30.0%
! TTTGTTCTTTGGATTTGGTA+AGG + chr3_2:40560837-40560856 Msa0405570:intron 30.0%
! TTGTTCTTTGGATTTGGTAA+GGG + chr3_2:40560838-40560857 Msa0405570:intron 30.0%
GATAACACTCTTACAAATTG+TGG - chr3_2:40560880-40560899 None:intergenic 30.0%
AAAGGAAAACTGTTTAGAAG+AGG + chr3_2:40561505-40561524 Msa0405570:intron 30.0%
AAGGAAAACTGTTTAGAAGA+GGG + chr3_2:40561506-40561525 Msa0405570:intron 30.0%
!!! ATACCTCAAGTCTTTGTTTT+AGG + chr3_2:40561997-40562016 Msa0405570:intron 30.0%
AATGGTGATAAGACATGATT+TGG - chr3_2:40562174-40562193 None:intergenic 30.0%
TTCAAACCATTGTATGAAAC+TGG + chr3_2:40562488-40562507 Msa0405570:intron 30.0%
!! TTTTTCATTTTTGAGAGTGG+GGG + chr3_2:40562735-40562754 Msa0405570:intron 30.0%
CTATCTATCTATGAAGTTTG+TGG - chr3_2:40563213-40563232 None:intergenic 30.0%
TTACTTAACGAAACCTCAAT+TGG + chr3_2:40563279-40563298 Msa0405570:intron 30.0%
TAATCACGGGTAATCATATA+AGG + chr3_2:40563343-40563362 Msa0405570:intron 30.0%
CAAATCAATTGAAAAGAGAG+AGG - chr3_2:40563371-40563390 None:intergenic 30.0%
ATCATATGAATTTGAACGGT+GGG - chr3_2:40563433-40563452 None:intergenic 30.0%
AATCATATGAATTTGAACGG+TGG - chr3_2:40563434-40563453 None:intergenic 30.0%
!!! CTTCACATACTCTCTTTTTT+CGG + chr3_2:40563688-40563707 Msa0405570:intron 30.0%
! AAATAAGGACAACGATTTTC+TGG - chr3_2:40563802-40563821 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG + chr3_2:40564086-40564105 Msa0405570:intron 30.0%
CATTACTCAATTAGGAAATG+TGG + chr3_2:40564121-40564140 Msa0405570:intron 30.0%
TATATACTCAACATGACACA+TGG + chr3_2:40564163-40564182 Msa0405570:intron 30.0%
!!! TATTTTTTTTTGGTAGTGGC+CGG + chr3_2:40564187-40564206 Msa0405570:intron 30.0%
!!! GTTTTTCTATTGGATTGGTT+CGG - chr3_2:40564271-40564290 None:intergenic 30.0%
!!! CATTTTTTTACTCAATCGCA+TGG + chr3_2:40564355-40564374 Msa0405570:intron 30.0%
!! GTTTATATGAGTATTGGTCT+AGG - chr3_2:40564470-40564489 None:intergenic 30.0%
!! TTTTGTCCACGTTTTTAACT+TGG + chr3_2:40564639-40564658 Msa0405570:intron 30.0%
!! TTTAACTTGGTCTATGTTGT+TGG + chr3_2:40564652-40564671 Msa0405570:intron 30.0%
!!! CCACATGGTTTTTTATTATG+CGG + chr3_2:40564893-40564912 Msa0405570:intron 30.0%
!!! TGGTTTTTTATTATGCGGTT+AGG + chr3_2:40564898-40564917 Msa0405570:intron 30.0%
TTTCTCACACAGATTAAGAA+AGG - chr3_2:40565194-40565213 None:intergenic 30.0%
CCAATTTAATTGACCTACTT+TGG - chr3_2:40565217-40565236 None:intergenic 30.0%
CCAAAGTAGGTCAATTAAAT+TGG + chr3_2:40565214-40565233 Msa0405570:intron 30.0%
!! ATTGTCCTTTTAAAAACGTG+GGG + chr3_2:40565307-40565326 Msa0405570:intron 30.0%
TAATAAGGTCCAAATATAGC+AGG - chr3_2:40565394-40565413 None:intergenic 30.0%
ATTTGGACCTTGTTAATTAC+TGG + chr3_2:40565591-40565610 Msa0405570:intron 30.0%
!!! CAGCATTTTTTTTTGGTGTT+TGG + chr3_2:40565629-40565648 Msa0405570:intron 30.0%
!!! GCATTTTTTTTTGGTGTTTG+GGG + chr3_2:40565631-40565650 Msa0405570:intron 30.0%
! CATAATTTTTCTCACACAAG+TGG + chr3_2:40565747-40565766 Msa0405570:intron 30.0%
! TGAGTTTAGTTCAGATGTTT+GGG + chr3_2:40566039-40566058 Msa0405570:intron 30.0%
GACAATGCATAAAATATGCA+AGG + chr3_2:40566061-40566080 Msa0405570:intron 30.0%
!!! TGGTCTTTGTTTTGTATCTA+GGG - chr3_2:40566153-40566172 None:intergenic 30.0%
!!! TTGGTCTTTGTTTTGTATCT+AGG - chr3_2:40566154-40566173 None:intergenic 30.0%
AAGAAACACTTATTTCCAAC+TGG - chr3_2:40566243-40566262 None:intergenic 30.0%
AGTTGGAAATAAGTGTTTCT+TGG + chr3_2:40566242-40566261 Msa0405570:intron 30.0%
!!! TTGGTGCTAAATTTGTGTTT+TGG - chr3_2:40566366-40566385 None:intergenic 30.0%
TATAAGTTTGTCCCAATGAA+TGG + chr3_2:40566405-40566424 Msa0405570:intron 30.0%
! TTAACTTTTTGTGCATCACA+CGG - chr3_2:40566650-40566669 None:intergenic 30.0%
! ACCCATTTAAGATGTATTGT+AGG - chr3_2:40566915-40566934 None:intergenic 30.0%
GGTTCTTTGTTCTTTGGATT+TGG + chr3_2:40560832-40560851 Msa0405570:intron 35.0%
ATCATATCCTGACAACGTAA+GGG - chr3_2:40561731-40561750 None:intergenic 35.0%
AATCATATCCTGACAACGTA+AGG - chr3_2:40561732-40561751 None:intergenic 35.0%
GTTCCTAAAACAAAGACTTG+AGG - chr3_2:40562003-40562022 None:intergenic 35.0%
AAACCATTGTATGAAACTGG+AGG + chr3_2:40562491-40562510 Msa0405570:intron 35.0%
ATTGTATGAAACTGGAGGTT+CGG + chr3_2:40562496-40562515 Msa0405570:intron 35.0%
TCGGCTCTCATAGTAAAAAT+AGG + chr3_2:40562515-40562534 Msa0405570:intron 35.0%
AACGAAACCTCAATTGGTTA+AGG + chr3_2:40563285-40563304 Msa0405570:intron 35.0%
CAAAAGAAAAGTCGACACAT+AGG + chr3_2:40563622-40563641 Msa0405570:intron 35.0%
ACATAGGTTCACATACTCTT+TGG + chr3_2:40563638-40563657 Msa0405570:intron 35.0%
! CTTTGGAAAAATCGACACAT+AGG + chr3_2:40563655-40563674 Msa0405570:intron 35.0%
! CGAAAAAAGAGAGTATGTGA+AGG - chr3_2:40563690-40563709 None:intergenic 35.0%
ATTAGGAAATGTGGCAATAG+TGG + chr3_2:40564130-40564149 Msa0405570:intron 35.0%
!!! ATTTTTTTTTGGTAGTGGCC+GGG + chr3_2:40564188-40564207 Msa0405570:intron 35.0%
GACAATGCATGAAATATGCA+AGG - chr3_2:40564228-40564247 None:intergenic 35.0%
! TTGCGGTTTTTCTATTGGAT+TGG - chr3_2:40564276-40564295 None:intergenic 35.0%
! TTTTACTCAATCGCATGGTT+TGG + chr3_2:40564360-40564379 Msa0405570:intron 35.0%
! AGTTTTCTTATGTTGCGGTT+TGG - chr3_2:40564428-40564447 None:intergenic 35.0%
CATAGACCAAGTTAAAAACG+TGG - chr3_2:40564648-40564667 None:intergenic 35.0%
!! AAAAACCATGTGGTTTGGTT+TGG - chr3_2:40564886-40564905 None:intergenic 35.0%
CCGCATAATAAAAAACCATG+TGG - chr3_2:40564896-40564915 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG - chr3_2:40565032-40565051 None:intergenic 35.0%
GTAGGTCAATTAAATTGGGA+CGG + chr3_2:40565219-40565238 Msa0405570:intron 35.0%
! GATTTCCCCACGTTTTTAAA+AGG - chr3_2:40565315-40565334 None:intergenic 35.0%
ATGCGTGCCAGTAATTAATA+AGG - chr3_2:40565409-40565428 None:intergenic 35.0%
!! CATCATTTTTCTCACACAAG+TGG + chr3_2:40565461-40565480 Msa0405570:intron 35.0%
TAACAAGGTCCAAATATAGC+CGG - chr3_2:40565586-40565605 None:intergenic 35.0%
ATGCATGCCAGTAATTAACA+AGG - chr3_2:40565601-40565620 None:intergenic 35.0%
! ATCGTGAGTTTAGCTCAATT+GGG - chr3_2:40565696-40565715 None:intergenic 35.0%
TGTGAAGATGAGAGATAAAG+TGG + chr3_2:40565935-40565954 Msa0405570:intron 35.0%
CTTATTCTCTCTCATCTAGA+AGG - chr3_2:40566013-40566032 None:intergenic 35.0%
! GTGAGTTTAGTTCAGATGTT+TGG + chr3_2:40566038-40566057 Msa0405570:intron 35.0%
TGCATAAAATATGCAAGGTC+CGG + chr3_2:40566066-40566085 Msa0405570:intron 35.0%
! AGGATGTTTTCCATAGTGTA+GGG - chr3_2:40566201-40566220 None:intergenic 35.0%
! AAGGATGTTTTCCATAGTGT+AGG - chr3_2:40566202-40566221 None:intergenic 35.0%
CTATTCAAGTGGATGTTTGA+TGG - chr3_2:40566291-40566310 None:intergenic 35.0%
AGGATGTTTGACTATTCAAG+TGG - chr3_2:40566302-40566321 None:intergenic 35.0%
TGCATATTTATGGCTATTGG+TGG - chr3_2:40566334-40566353 None:intergenic 35.0%
! AATTTAGCACCAAAAGTGTG+TGG + chr3_2:40566373-40566392 Msa0405570:intron 35.0%
! GTTAACTAACCACACACTTT+TGG - chr3_2:40566385-40566404 None:intergenic 35.0%
AAGAGAGGTAAACCATAACA+TGG + chr3_2:40566491-40566510 Msa0405570:intron 35.0%
! TAATGGATCAGACCATGTTA+TGG - chr3_2:40566506-40566525 None:intergenic 35.0%
ACATGGTCTGATCCATTATA+TGG + chr3_2:40566508-40566527 Msa0405570:intron 35.0%
GTGTGACTATAGCCATATAA+TGG - chr3_2:40566523-40566542 None:intergenic 35.0%
! TAACTTTTTGTGCATCACAC+GGG - chr3_2:40566649-40566668 None:intergenic 35.0%
! TAGATCTGTTTTCGCAAAGT+GGG + chr3_2:40567290-40567309 Msa0405570:intron 35.0%
AACACAAACAAACAACACTG+AGG - chr3_2:40567561-40567580 None:intergenic 35.0%
TGTTAGTATGTTGTGTGTTG+TGG + chr3_2:40567590-40567609 Msa0405570:intron 35.0%
! TGTGTTGTGGTTGTGTTTTA+GGG + chr3_2:40567603-40567622 Msa0405570:intron 35.0%
!!! TGGTACACTGCTATGTTTTT+TGG + chr3_2:40567684-40567703 Msa0405570:intron 35.0%
!!! TACACTGCTATGTTTTTTGG+TGG + chr3_2:40567687-40567706 Msa0405570:intron 35.0%
TTCTATTCTGTCTGTGTTTG+TGG + chr3_2:40567832-40567851 Msa0405570:intron 35.0%
TTGTGTTCTGTCAATGATCT+TGG + chr3_2:40567863-40567882 Msa0405570:intron 35.0%
TGTGTTCTGTCAATGATCTT+GGG + chr3_2:40567864-40567883 Msa0405570:intron 35.0%
ACACACAAAAAATGACCCTT+AGG - chr3_2:40567936-40567955 None:intergenic 35.0%
!!! GGTCATTTTTTGTGTGTTGT+CGG + chr3_2:40567939-40567958 Msa0405570:CDS 35.0%
!!! GTCATTTTTTGTGTGTTGTC+GGG + chr3_2:40567940-40567959 Msa0405570:CDS 35.0%
!!! TCATTTTTTGTGTGTTGTCG+GGG + chr3_2:40567941-40567960 Msa0405570:CDS 35.0%
!!! TGGATTAGATTTTGGTTGCT+TGG + chr3_2:40568028-40568047 Msa0405570:CDS 35.0%
AAGAAATGGGATGCTCAAGA+AGG + chr3_2:40560454-40560473 Msa0405570:CDS 40.0%
AGAACTCATAGAGCTTTCCA+CGG - chr3_2:40560535-40560554 None:intergenic 40.0%
GAAAACTGTTTAGAAGAGGG+AGG + chr3_2:40561509-40561528 Msa0405570:intron 40.0%
TCAAAGACATGACCTCACTT+AGG - chr3_2:40561636-40561655 None:intergenic 40.0%
TTTGATACCCTTACGTTGTC+AGG + chr3_2:40561721-40561740 Msa0405570:intron 40.0%
GATCAATGTGAACTTTGGAC+AGG - chr3_2:40561927-40561946 None:intergenic 40.0%
TGCACGATCAATGTGAACTT+TGG - chr3_2:40561932-40561951 None:intergenic 40.0%
GAACCTCCAGTTTCATACAA+TGG - chr3_2:40562497-40562516 None:intergenic 40.0%
TCTTTGCACTCCCTAAAGAA+CGG + chr3_2:40562824-40562843 Msa0405570:intron 40.0%
TGTGAGTCCTTAACCAATTG+AGG - chr3_2:40563295-40563314 None:intergenic 40.0%
TGGTTAAGGACTCACATTAG+AGG + chr3_2:40563299-40563318 Msa0405570:intron 40.0%
!!! TTTTTTCGGTCAGACAACTG+AGG + chr3_2:40563702-40563721 Msa0405570:intron 40.0%
!! TTTTTCGGTCAGACAACTGA+GGG + chr3_2:40563703-40563722 Msa0405570:intron 40.0%
!!! TTTTTTTTTGGTAGTGGCCG+GGG + chr3_2:40564189-40564208 Msa0405570:intron 40.0%
CATGAAATATGCAAGGTTCG+AGG - chr3_2:40564221-40564240 None:intergenic 40.0%
TTCATGCATTGTCCCAACTA+AGG + chr3_2:40564235-40564254 Msa0405570:intron 40.0%
TCATGCATTGTCCCAACTAA+GGG + chr3_2:40564236-40564255 Msa0405570:intron 40.0%
!!! GGTTTTGAACACCCTTAGTT+GGG - chr3_2:40564250-40564269 None:intergenic 40.0%
!! TCGGTTTGCGGTTTTTCTAT+TGG - chr3_2:40564281-40564300 None:intergenic 40.0%
!!! GTTTTTTGCGGTTTCGGTTT+GGG - chr3_2:40564309-40564328 None:intergenic 40.0%
!!! AATGCGGTTTTTTGCGGTTT+CGG - chr3_2:40564315-40564334 None:intergenic 40.0%
AAACCGCAAAAAACCGCATT+TGG + chr3_2:40564315-40564334 Msa0405570:intron 40.0%
!!! GAACCAAATGCGGTTTTTTG+CGG - chr3_2:40564321-40564340 None:intergenic 40.0%
GCAAAAAACCGCATTTGGTT+CGG + chr3_2:40564320-40564339 Msa0405570:intron 40.0%
GATTACATCCGAACCAAATG+CGG - chr3_2:40564331-40564350 None:intergenic 40.0%
!! GCATTTGGTTCGGATGTAAT+CGG + chr3_2:40564330-40564349 Msa0405570:intron 40.0%
!! TCTTATGTTGCGGTTTGGTT+TGG - chr3_2:40564423-40564442 None:intergenic 40.0%
AAACCAAACCAATGCGGTTT+GGG - chr3_2:40564827-40564846 None:intergenic 40.0%
CAAACCAAACCAAACCAATG+CGG - chr3_2:40564833-40564852 None:intergenic 40.0%
!! TGGTTTGGTTTGGTTTGGTT+CGG + chr3_2:40564836-40564855 Msa0405570:intron 40.0%
GAAAATGGGTCAGTTATTCC+GGG - chr3_2:40565031-40565050 None:intergenic 40.0%
TCTGTGTGAGAAACCAAAGT+AGG + chr3_2:40565201-40565220 Msa0405570:intron 40.0%
ATTTACTTCTGCTCGACTTC+AGG - chr3_2:40565344-40565363 None:intergenic 40.0%
GTCCAAATATAGCAGGTTCA+AGG - chr3_2:40565387-40565406 None:intergenic 40.0%
!!! GGTTTTTTTGTCCTTTGTCG+TGG + chr3_2:40565482-40565501 Msa0405570:intron 40.0%
GATGGTATTCCGGCTATATT+TGG + chr3_2:40565574-40565593 Msa0405570:intron 40.0%
! CATCGTGAGTTTAGCTCAAT+TGG - chr3_2:40565697-40565716 None:intergenic 40.0%
!!! GGTTTTTTTGTCCTTTGTCG+TGG + chr3_2:40565482-40565501 Msa0405570:intron 40.0%
ACATCTGAACTAAACTCACG+AGG - chr3_2:40566037-40566056 None:intergenic 40.0%
GCATAAAATATGCAAGGTCC+GGG + chr3_2:40566067-40566086 Msa0405570:intron 40.0%
CATAAAATATGCAAGGTCCG+GGG + chr3_2:40566068-40566087 Msa0405570:intron 40.0%
TGGAAAACATCCTTAACACC+AGG + chr3_2:40566208-40566227 Msa0405570:intron 40.0%
! GTGTTTCTATCCTGGTGTTA+AGG - chr3_2:40566221-40566240 None:intergenic 40.0%
TTTACTGTTAACCTGTGCAG+CGG - chr3_2:40566959-40566978 None:intergenic 40.0%
! GAGAGGTCAGAGGTTTATTT+TGG - chr3_2:40566988-40567007 None:intergenic 40.0%
GAACGATAGAGATAAGAGAG+AGG - chr3_2:40567005-40567024 None:intergenic 40.0%
GATCTTGTAGAACCAATAGG+TGG - chr3_2:40567240-40567259 None:intergenic 40.0%
CACGATCTTGTAGAACCAAT+AGG - chr3_2:40567243-40567262 None:intergenic 40.0%
CACTTTGCGAAAACAGATCT+AGG - chr3_2:40567291-40567310 None:intergenic 40.0%
! CTAGATCTGTTTTCGCAAAG+TGG + chr3_2:40567289-40567308 Msa0405570:intron 40.0%
AGCAACCTGCAAAAAACACA+AGG - chr3_2:40567512-40567531 None:intergenic 40.0%
!!! TTGTGTTTTTTGCAGGTTGC+TGG + chr3_2:40567511-40567530 Msa0405570:intron 40.0%
ACACACAACATACTAACAGC+TGG - chr3_2:40567588-40567607 None:intergenic 40.0%
! GTGTGTTGTGGTTGTGTTTT+AGG + chr3_2:40567602-40567621 Msa0405570:intron 40.0%
!!! GTGTTGCTGTTTTGTTCCTT+CGG + chr3_2:40567977-40567996 Msa0405570:CDS 40.0%
AAATCTAATCCAAGAGCAGG+AGG - chr3_2:40568020-40568039 None:intergenic 40.0%
CCAAAATCTAATCCAAGAGC+AGG - chr3_2:40568023-40568042 None:intergenic 40.0%
!! CCTGCTCTTGGATTAGATTT+TGG + chr3_2:40568020-40568039 Msa0405570:CDS 40.0%
GAGCAACTTCAGCTTCACAA+AGG - chr3_2:40560496-40560515 None:intergenic 45.0%
! CTCATCATTTTCTCTAGCCG+TGG + chr3_2:40560515-40560534 Msa0405570:CDS 45.0%
AAGCTCTATGAGTTCTGCAG+TGG + chr3_2:40560539-40560558 Msa0405570:CDS 45.0%
ACTGTTTAGAAGAGGGAGGA+TGG + chr3_2:40561513-40561532 Msa0405570:intron 45.0%
GCTCATTTCAATGCACTAGC+AGG + chr3_2:40562125-40562144 Msa0405570:intron 45.0%
TTTCTTGAGGCCCATCACTT+TGG + chr3_2:40562781-40562800 Msa0405570:intron 45.0%
TTCTTGAGGCCCATCACTTT+GGG + chr3_2:40562782-40562801 Msa0405570:intron 45.0%
! TTTTCGGTCAGACAACTGAG+GGG + chr3_2:40563704-40563723 Msa0405570:intron 45.0%
TCAGACAACTGAGGGGAAAA+AGG + chr3_2:40563711-40563730 Msa0405570:intron 45.0%
GTGATTGACATGTTGTCTGC+AGG + chr3_2:40563733-40563752 Msa0405570:intron 45.0%
AAGGTTCGAGGTTTAAACCC+CGG - chr3_2:40564209-40564228 None:intergenic 45.0%
!!! CGGTTTTGAACACCCTTAGT+TGG - chr3_2:40564251-40564270 None:intergenic 45.0%
!!! GGTTTTTTGCGGTTTCGGTT+TGG - chr3_2:40564310-40564329 None:intergenic 45.0%
!! CTCAATCGCATGGTTTGGTT+TGG + chr3_2:40564365-40564384 Msa0405570:intron 45.0%
!! GCATGGTTTGGTTTGGTTTG+CGG + chr3_2:40564372-40564391 Msa0405570:intron 45.0%
!! TTGGTTTGGTTTGGTTCGGT+TGG - chr3_2:40564409-40564428 None:intergenic 45.0%
!! CGGTTTGGTTTGGTTTGGTT+CGG - chr3_2:40564413-40564432 None:intergenic 45.0%
!! TGTTGCGGTTTGGTTTGGTT+TGG - chr3_2:40564418-40564437 None:intergenic 45.0%
CAAACCAAACCAATGCGGTT+TGG - chr3_2:40564828-40564847 None:intergenic 45.0%
!! CAAACCGCATTGGTTTGGTT+TGG + chr3_2:40564826-40564845 Msa0405570:intron 45.0%
!! CGCATTGGTTTGGTTTGGTT+TGG + chr3_2:40564831-40564850 Msa0405570:intron 45.0%
TGAGCATAGCTCAGTTGGTT+GGG - chr3_2:40564975-40564994 None:intergenic 45.0%
GGTCAATTAAATTGGGACGG+AGG + chr3_2:40565222-40565241 Msa0405570:intron 45.0%
! CCTGGCATAAGTTTTCAGCT+TGG - chr3_2:40566173-40566192 None:intergenic 45.0%
CCAAGCTGAAAACTTATGCC+AGG + chr3_2:40566170-40566189 Msa0405570:intron 45.0%
ACCAGGATAGAAACACCAGT+TGG + chr3_2:40566225-40566244 Msa0405570:intron 45.0%
! TCCAACTGGTGTTTCTATCC+TGG - chr3_2:40566229-40566248 None:intergenic 45.0%
!! GCTATTGGTGGTGAGAGATT+AGG - chr3_2:40566322-40566341 None:intergenic 45.0%
AGAGATAAGAGAGAGGTCAG+AGG - chr3_2:40566998-40567017 None:intergenic 45.0%
! GGTTTGTTTGGATTTGGGGA+GGG - chr3_2:40567052-40567071 None:intergenic 45.0%
! GGAGGGTTTGTTTGGATTTG+GGG - chr3_2:40567056-40567075 None:intergenic 45.0%
! CGGAGGGTTTGTTTGGATTT+GGG - chr3_2:40567057-40567076 None:intergenic 45.0%
!!! TGGCTGTTTTTGGTGGTTGT+CGG + chr3_2:40567453-40567472 Msa0405570:intron 45.0%
CCTGCAAAAAACACAAGGAC+CGG - chr3_2:40567507-40567526 None:intergenic 45.0%
!!! GTTGTGGTTGTGTTTTAGGG+TGG + chr3_2:40567606-40567625 Msa0405570:intron 45.0%
! TTTAGGGTGGTGTTCTGTCA+AGG + chr3_2:40567619-40567638 Msa0405570:intron 45.0%
TTAGGGTGGTGTTCTGTCAA+GGG + chr3_2:40567620-40567639 Msa0405570:intron 45.0%
CATAGCAGTGTACCACCAAA+GGG - chr3_2:40567679-40567698 None:intergenic 45.0%
ACATAGCAGTGTACCACCAA+AGG - chr3_2:40567680-40567699 None:intergenic 45.0%
CTGTCAATGATCTTGGGTCA+AGG + chr3_2:40567870-40567889 Msa0405570:intron 45.0%
!!! CAAAAAAAAAAAAATTATTT+TGG + chr3_2:40560692-40560711 Msa0405570:intron 5.0%
!!! ATAATTTTTATGTTATATAT+TGG + chr3_2:40565520-40565539 Msa0405570:intron 5.0%
GGGGAAAGGTAGAGCTAAAG+AGG + chr3_2:40560390-40560409 Msa0405570:CDS 50.0%
ATGAGTTCTGCAGTGGCACT+AGG + chr3_2:40560546-40560565 Msa0405570:CDS 50.0%
GGGAGGATGGTCTCCATTTA+TGG + chr3_2:40561526-40561545 Msa0405570:intron 50.0%
!! CATTTTTGAGAGTGGGGGTG+AGG + chr3_2:40562740-40562759 Msa0405570:intron 50.0%
GCAAAGAACTCAACCGAGCT+GGG - chr3_2:40562811-40562830 None:intergenic 50.0%
TGCAAAGAACTCAACCGAGC+TGG - chr3_2:40562812-40562831 None:intergenic 50.0%
!! GTTTGGGTTGGTTCGGTTTG+CGG - chr3_2:40564293-40564312 None:intergenic 50.0%
!! GGTTTCGGTTTGGGTTGGTT+CGG - chr3_2:40564300-40564319 None:intergenic 50.0%
!! TTTGCGGTTTCGGTTTGGGT+TGG - chr3_2:40564305-40564324 None:intergenic 50.0%
!! TTGGGTTGGATCGGTTAGTG+CGG - chr3_2:40564809-40564828 None:intergenic 50.0%
!! CAATGCGGTTTGGGTTGGAT+CGG - chr3_2:40564818-40564837 None:intergenic 50.0%
! CAAACCAATGCGGTTTGGGT+TGG - chr3_2:40564823-40564842 None:intergenic 50.0%
!! CAACCCAAACCGCATTGGTT+TGG + chr3_2:40564821-40564840 Msa0405570:intron 50.0%
!! CCATGTGGTTTGGTTTGGCT+CGG - chr3_2:40564881-40564900 None:intergenic 50.0%
AGCTCAGTTGGTTGGGACTA+GGG - chr3_2:40564968-40564987 None:intergenic 50.0%
TAGCTCAGTTGGTTGGGACT+AGG - chr3_2:40564969-40564988 None:intergenic 50.0%
GTGAGCATAGCTCAGTTGGT+TGG - chr3_2:40564976-40564995 None:intergenic 50.0%
GATTATTACTCCCTCCGTCC+CGG + chr3_2:40565010-40565029 Msa0405570:intron 50.0%
ATGGGTCAGTTATTCCGGGA+CGG - chr3_2:40565027-40565046 None:intergenic 50.0%
! TCTGCTCGACTTCAGGTTCA+AGG - chr3_2:40565337-40565356 None:intergenic 50.0%
CTGAAAGCTGTCGGAAGTTG+GGG - chr3_2:40567027-40567046 None:intergenic 50.0%
GCTGAAAGCTGTCGGAAGTT+GGG - chr3_2:40567028-40567047 None:intergenic 50.0%
! GGGTTTGTTTGGATTTGGGG+AGG - chr3_2:40567053-40567072 None:intergenic 50.0%
! GCGGAGGGTTTGTTTGGATT+TGG - chr3_2:40567058-40567077 None:intergenic 50.0%
ACCAACCCCGATCTACATCT+CGG - chr3_2:40567080-40567099 None:intergenic 50.0%
! TGGTTCTACAAGATCGTGCC+TGG + chr3_2:40567245-40567264 Msa0405570:intron 50.0%
! CTGTTTTCGCAAAGTGGGTC+CGG + chr3_2:40567295-40567314 Msa0405570:intron 50.0%
CCACAACAATCACTGCCAAC+CGG - chr3_2:40567333-40567352 None:intergenic 50.0%
CGGTTGGCAGTGATTGTTGT+GGG + chr3_2:40567331-40567350 Msa0405570:intron 50.0%
GCAGTGATTGTTGTGGGATC+TGG + chr3_2:40567337-40567356 Msa0405570:intron 50.0%
GTGATTGTTGTGGGATCTGG+TGG + chr3_2:40567340-40567359 Msa0405570:intron 50.0%
TTGTGGGATCTGGTGGTTGT+CGG + chr3_2:40567347-40567366 Msa0405570:intron 50.0%
CAGACACCACACACCAAACA+CGG - chr3_2:40567389-40567408 None:intergenic 50.0%
!! GTGTGTCTCGTGGCTGTTTT+TGG + chr3_2:40567443-40567462 Msa0405570:intron 50.0%
!!! TGTCTCGTGGCTGTTTTTGG+TGG + chr3_2:40567446-40567465 Msa0405570:intron 50.0%
!!! CCGGTCCTTGTGTTTTTTGC+AGG + chr3_2:40567504-40567523 Msa0405570:intron 50.0%
!! CTGGTCTTGTTCGTGTCTGT+TGG + chr3_2:40567530-40567549 Msa0405570:intron 50.0%
TGGTGTTCTGTCAAGGGACT+AGG + chr3_2:40567626-40567645 Msa0405570:CDS 50.0%
GGTGTTCTGTCAAGGGACTA+GGG + chr3_2:40567627-40567646 Msa0405570:CDS 50.0%
!! ACTAGGGTCGAGGCTGTTTT+AGG + chr3_2:40567643-40567662 Msa0405570:CDS 50.0%
TTAGGTCTCCCTCAACCCTT+TGG + chr3_2:40567661-40567680 Msa0405570:CDS 50.0%
GTGTACCACCAAAGGGTTGA+GGG - chr3_2:40567672-40567691 None:intergenic 50.0%
AGTGTACCACCAAAGGGTTG+AGG - chr3_2:40567673-40567692 None:intergenic 50.0%
! TAGGTGTTGTGTTCCGTCTC+AGG + chr3_2:40567748-40567767 Msa0405570:intron 50.0%
TTGTGTTCCGTCTCAGGTCT+AGG + chr3_2:40567754-40567773 Msa0405570:intron 50.0%
TGTGTTCCGTCTCAGGTCTA+GGG + chr3_2:40567755-40567774 Msa0405570:intron 50.0%
TTAGATCTCCCTCAGCCTCT+TGG + chr3_2:40567788-40567807 Msa0405570:intron 50.0%
! CTAGATCCTCCTCAGCCTTT+TGG + chr3_2:40567897-40567916 Msa0405570:CDS 50.0%
AGTGAACCACCAAAAGGCTG+AGG - chr3_2:40567909-40567928 None:intergenic 50.0%
GGCGTAAGTGAACCACCAAA+AGG - chr3_2:40567915-40567934 None:intergenic 50.0%
TGGTGGTTCACTTACGCCTA+AGG + chr3_2:40567917-40567936 Msa0405570:CDS 50.0%
GGTGGTTCACTTACGCCTAA+GGG + chr3_2:40567918-40567937 Msa0405570:CDS 50.0%
ACGTTGTTGCTCGAAAGAGC+TGG + chr3_2:40568051-40568070 Msa0405570:CDS 50.0%
CGTTGTTGCTCGAAAGAGCT+GGG + chr3_2:40568052-40568071 Msa0405570:CDS 50.0%
GCTGGGTCTCCCAAAGTGAT+GGG - chr3_2:40562794-40562813 None:intergenic 55.0%
AGCTGGGTCTCCCAAAGTGA+TGG - chr3_2:40562795-40562814 None:intergenic 55.0%
! TCACTTTGGGAGACCCAGCT+CGG + chr3_2:40562795-40562814 Msa0405570:intron 55.0%
TGAGGCAGGGCCGTTCTTTA+GGG - chr3_2:40562837-40562856 None:intergenic 55.0%
TTGAGGCAGGGCCGTTCTTT+AGG - chr3_2:40562838-40562857 None:intergenic 55.0%
CGATCCAACCCAAACCGCAT+TGG + chr3_2:40564816-40564835 Msa0405570:intron 55.0%
CCGAGCCAAACCAAACCACA+TGG + chr3_2:40564878-40564897 Msa0405570:intron 55.0%
GCTCAGTTGGTTGGGACTAG+GGG - chr3_2:40564967-40564986 None:intergenic 55.0%
CCTCGTGAGCATAGCTCAGT+TGG - chr3_2:40564980-40564999 None:intergenic 55.0%
CCAACTGAGCTATGCTCACG+AGG + chr3_2:40564977-40564996 Msa0405570:intron 55.0%
GTCAGTTATTCCGGGACGGA+GGG - chr3_2:40565023-40565042 None:intergenic 55.0%
AAGGTCCGGGGTTCAAACTC+TGG + chr3_2:40566080-40566099 Msa0405570:intron 55.0%
AGTGGCCAGAGTTTGAACCC+CGG - chr3_2:40566088-40566107 None:intergenic 55.0%
TTGTGTGCAAACCGCTGCAC+AGG + chr3_2:40566945-40566964 Msa0405570:intron 55.0%
CGCTGAAAGCTGTCGGAAGT+TGG - chr3_2:40567029-40567048 None:intergenic 55.0%
! ATCTCGGCGGAGGGTTTGTT+TGG - chr3_2:40567064-40567083 None:intergenic 55.0%
AACCCCGATCTACATCTCGG+CGG - chr3_2:40567077-40567096 None:intergenic 55.0%
GAGATGTAGATCGGGGTTGG+TGG + chr3_2:40567079-40567098 Msa0405570:intron 55.0%
GTGACGACAGAGAAGGATGC+CGG - chr3_2:40567150-40567169 None:intergenic 55.0%
GGCAACAGTGACGACAGAGA+AGG - chr3_2:40567157-40567176 None:intergenic 55.0%
CTGTCGTCACTGTTGCCTAC+CGG + chr3_2:40567160-40567179 Msa0405570:intron 55.0%
AATAGGTGGCCGAACTGCGA+CGG - chr3_2:40567226-40567245 None:intergenic 55.0%
AGATCTGAGCAAGACGCACC+AGG - chr3_2:40567266-40567285 None:intergenic 55.0%
! TTTTCGCAAAGTGGGTCCGG+TGG + chr3_2:40567298-40567317 Msa0405570:intron 55.0%
TTTCGCAAAGTGGGTCCGGT+GGG + chr3_2:40567299-40567318 Msa0405570:intron 55.0%
CAACCGGCAAAACAACCCAC+CGG - chr3_2:40567317-40567336 None:intergenic 55.0%
CCGGTTGGCAGTGATTGTTG+TGG + chr3_2:40567330-40567349 Msa0405570:intron 55.0%
! ATCTGGTGGTTGTCGGTGTC+TGG + chr3_2:40567354-40567373 Msa0405570:intron 55.0%
!! CGTGTTTGGTGTGTGGTGTC+TGG + chr3_2:40567387-40567406 Msa0405570:intron 55.0%
!! GTGTGGTGTCTGGTTCTCTC+TGG + chr3_2:40567397-40567416 Msa0405570:intron 55.0%
!! TGGTGTCTGGTTCTCTCTGG+AGG + chr3_2:40567400-40567419 Msa0405570:intron 55.0%
GTGTCGTGTTGTGTGTCTCG+TGG + chr3_2:40567433-40567452 Msa0405570:intron 55.0%
! TCGCGGTTCAGGGCGATTTT+TGG + chr3_2:40567481-40567500 Msa0405570:intron 55.0%
!!! GGTTCAGGGCGATTTTTGGC+CGG + chr3_2:40567485-40567504 Msa0405570:intron 55.0%
GAGAACCACCAAGAGGCTGA+GGG - chr3_2:40567799-40567818 None:intergenic 55.0%
AGAGAACCACCAAGAGGCTG+AGG - chr3_2:40567800-40567819 None:intergenic 55.0%
CTGAGCAGAGAACCACCAAG+AGG - chr3_2:40567806-40567825 None:intergenic 55.0%
! GATCCTCCTCAGCCTTTTGG+TGG + chr3_2:40567900-40567919 Msa0405570:CDS 55.0%
GAACCACCAAAAGGCTGAGG+AGG - chr3_2:40567906-40567925 None:intergenic 55.0%
TGTGTTGTCGGGGCTGTGTT+TGG + chr3_2:40567951-40567970 Msa0405570:CDS 55.0%
GTGCAGATGCTTCGTGCTGA+CGG + chr3_2:40568076-40568095 Msa0405570:CDS 55.0%
!! GTTCGCGGTGCGGTTTGGTT+CGG - chr3_2:40564943-40564962 None:intergenic 60.0%
!! GTTGGGACTAGGGGTGTTCG+CGG - chr3_2:40564958-40564977 None:intergenic 60.0%
GGTCAGTTATTCCGGGACGG+AGG - chr3_2:40565024-40565043 None:intergenic 60.0%
CCATAGTGTAGGGCTGCTCC+TGG - chr3_2:40566191-40566210 None:intergenic 60.0%
CCAGGAGCAGCCCTACACTA+TGG + chr3_2:40566188-40566207 Msa0405570:intron 60.0%
CCGATCTACATCTCGGCGGA+GGG - chr3_2:40567073-40567092 None:intergenic 60.0%
CCCTCCGCCGAGATGTAGAT+CGG + chr3_2:40567070-40567089 Msa0405570:intron 60.0%
CCTCCGCCGAGATGTAGATC+GGG + chr3_2:40567071-40567090 Msa0405570:intron 60.0%
CTCCGCCGAGATGTAGATCG+GGG + chr3_2:40567072-40567091 Msa0405570:intron 60.0%
GCCGAGATGTAGATCGGGGT+TGG + chr3_2:40567076-40567095 Msa0405570:intron 60.0%
ACCATCGCACCTTCTCCCTC+CGG + chr3_2:40567128-40567147 Msa0405570:intron 60.0%
AGAAGGATGCCGGAGGGAGA+AGG - chr3_2:40567140-40567159 None:intergenic 60.0%
CGACAGAGAAGGATGCCGGA+GGG - chr3_2:40567146-40567165 None:intergenic 60.0%
ACGACAGAGAAGGATGCCGG+AGG - chr3_2:40567147-40567166 None:intergenic 60.0%
AAGAGGAGACGGACGGGAAG+AGG - chr3_2:40567189-40567208 None:intergenic 60.0%
AGACGGACGGGAAGAGGAGA+CGG - chr3_2:40567183-40567202 None:intergenic 60.0%
GTCGCAGTTCGGCCACCTAT+TGG + chr3_2:40567225-40567244 Msa0405570:intron 60.0%
!!! GGTCCGGTGGGTTGTTTTGC+CGG + chr3_2:40567311-40567330 Msa0405570:intron 60.0%
!!! CGGTGGGTTGTTTTGCCGGT+TGG + chr3_2:40567315-40567334 Msa0405570:intron 60.0%
! GTGGTTGTCGGTGTCTGGCT+CGG + chr3_2:40567359-40567378 Msa0405570:intron 60.0%
! TGGTTGTCGGTGTCTGGCTC+GGG + chr3_2:40567360-40567379 Msa0405570:intron 60.0%
!! GGGTCTCCGTGTTTGGTGTG+TGG + chr3_2:40567380-40567399 Msa0405570:intron 60.0%
CTGTCAAGGGACTAGGGTCG+AGG + chr3_2:40567633-40567652 Msa0405570:CDS 60.0%
GGTCTCCCTCAACCCTTTGG+TGG + chr3_2:40567664-40567683 Msa0405570:CDS 60.0%
CCTCGACCCTAGACCTGAGA+CGG - chr3_2:40567764-40567783 None:intergenic 60.0%
GATCTCCCTCAGCCTCTTGG+TGG + chr3_2:40567791-40567810 Msa0405570:intron 60.0%
TTCCTTCGGAGCCTTGCTGC+TGG + chr3_2:40567991-40568010 Msa0405570:CDS 60.0%
!! GACTAGGGGTGTTCGCGGTG+CGG - chr3_2:40564953-40564972 None:intergenic 65.0%
!! GGGAGGGCGCTGAAAGCTGT+CGG - chr3_2:40567036-40567055 None:intergenic 65.0%
CCCGATCTACATCTCGGCGG+AGG - chr3_2:40567074-40567093 None:intergenic 65.0%
! GGAGGGAGAAGGTGCGATGG+TGG - chr3_2:40567129-40567148 None:intergenic 65.0%
GACGGGAAGAGGAGACCGGT+AGG - chr3_2:40567178-40567197 None:intergenic 65.0%
GACGGACGGGAAGAGGAGAC+CGG - chr3_2:40567182-40567201 None:intergenic 65.0%
GACGGGAAGAGGAGACGGAC+GGG - chr3_2:40567195-40567214 None:intergenic 65.0%
GGACGGGAAGAGGAGACGGA+CGG - chr3_2:40567196-40567215 None:intergenic 65.0%
ACTGCGACGGAGGAGACGGA+CGG - chr3_2:40567213-40567232 None:intergenic 65.0%
CCGAACTGCGACGGAGGAGA+CGG - chr3_2:40567217-40567236 None:intergenic 65.0%
CCGTCTCCTCCGTCGCAGTT+CGG + chr3_2:40567214-40567233 Msa0405570:intron 65.0%
!! CTGGCTCGGGTCTCCGTGTT+TGG + chr3_2:40567373-40567392 Msa0405570:intron 65.0%
GGTGGTTGTCGGCATCGTCG+CGG + chr3_2:40567464-40567483 Msa0405570:intron 65.0%
TGTCGGCATCGTCGCGGTTC+AGG + chr3_2:40567470-40567489 Msa0405570:intron 65.0%
GTCGGCATCGTCGCGGTTCA+GGG + chr3_2:40567471-40567490 Msa0405570:intron 65.0%
! CCGTCTCAGGTCTAGGGTCG+AGG + chr3_2:40567761-40567780 Msa0405570:intron 65.0%
CTCCAGCAGCAAGGCTCCGA+AGG - chr3_2:40567996-40568015 None:intergenic 65.0%
CTTCGGAGCCTTGCTGCTGG+AGG + chr3_2:40567994-40568013 Msa0405570:CDS 65.0%
TGCTGGAGGCCTCCTGCTCT+TGG + chr3_2:40568008-40568027 Msa0405570:CDS 65.0%
! GGGGTGTTCGCGGTGCGGTT+TGG - chr3_2:40564948-40564967 None:intergenic 70.0%
! GCCGGAGGGAGAAGGTGCGA+TGG - chr3_2:40567132-40567151 None:intergenic 70.0%
CGGAGGAGACGGACGGGAAG+AGG - chr3_2:40567206-40567225 None:intergenic 70.0%
CTGCGACGGAGGAGACGGAC+GGG - chr3_2:40567212-40567231 None:intergenic 70.0%
AGGTGGCCGAACTGCGACGG+AGG - chr3_2:40567223-40567242 None:intergenic 70.0%
GCAGGAGGCCTCCAGCAGCA+AGG - chr3_2:40568005-40568024 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 40560383 40568103 40560383 ID=Msa0405570;Name=Msa0405570
chr3_2 mRNA 40560383 40568103 40560383 ID=Msa0405570-mRNA-1;Parent=Msa0405570;Name=Msa0405570-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0|0|0.66|1|1|3|0|152
chr3_2 exon 40560383 40560567 40560383 ID=Msa0405570-mRNA-1:exon:7836;Parent=Msa0405570-mRNA-1
chr3_2 exon 40567624 40567685 40567624 ID=Msa0405570-mRNA-1:exon:7837;Parent=Msa0405570-mRNA-1
chr3_2 exon 40567892 40568103 40567892 ID=Msa0405570-mRNA-1:exon:7838;Parent=Msa0405570-mRNA-1
chr3_2 CDS 40560383 40560567 40560383 ID=Msa0405570-mRNA-1:cds;Parent=Msa0405570-mRNA-1
chr3_2 CDS 40567624 40567685 40567624 ID=Msa0405570-mRNA-1:cds;Parent=Msa0405570-mRNA-1
chr3_2 CDS 40567892 40568103 40567892 ID=Msa0405570-mRNA-1:cds;Parent=Msa0405570-mRNA-1
Gene Sequence

>Msa0405570

ATGGGTAGGGGAAAGGTAGAGCTAAAGAGGATTGAGAACAAAATAAATCGTCAAGTTACATTTGCAAAGAGAAGAAATGGGATGCTCAAGAAGGCTTATGAACTCTCTGTCCTTTGTGAAGCTGAAGTTGCTCTCATCATTTTCTCTAGCCGTGGAAAGCTCTATGAGTTCTGCAGTGGCACTAGGGTGGTGTTCTGTCAAGGGACTAGGGTCGAGGCTGTTTTAGGTCTCCCTCAACCCTTTGGTGGTTTTCTAGATCCTCCTCAGCCTTTTGGTGGTTCACTTACGCCTAAGGGTCATTTTTTGTGTGTTGTCGGGGCTGTGTTTGGTCAGTGTTGCTGTTTTGTTCCTTCGGAGCCTTGCTGCTGGAGGCCTCCTGCTCTTGGATTAGATTTTGGTTGCTTGGACGTTGTTGCTCGAAAGAGCTGGGCGTGCAGATGCTTCGTGCTGACGGAGTAG
Protein sequence

>Msa0405570

MGRGKVELKRIENKINRQVTFAKRRNGMLKKAYELSVLCEAEVALIIFSSRGKLYEFCSGTRVVFCQGTRVEAVLGLPQPFGGFLDPPQPFGGSLTPKGHFLCVVGAVFGQCCCFVPSEPCCWRPPALGLDFGCLDVVARKSWACRCFVLTE*