Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1087890 | XP_003593529.1 | 99.602 | 251 | 1 | 0 | 1 | 251 | 1 | 251 | 0.0 | 523 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1087890 | sp|P24805|TSJT1_TOBAC | 41.611 | 149 | 85 | 2 | 1 | 148 | 1 | 148 | 1.50e-34 | 124 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1087890 | G7IP18 | 99.602 | 251 | 1 | 0 | 1 | 251 | 1 | 251 | 0.0 | 523 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011920 | Msa1087890 | -0.813280 | 2.771898e-51 | -8.615850e-47 |
| Msa0037180 | Msa1087890 | 0.826347 | 2.851092e-54 | -8.615850e-47 |
| Msa0044010 | Msa1087890 | 0.807540 | 4.809210e-50 | -8.615850e-47 |
| Msa0046950 | Msa1087890 | 0.901418 | 2.733969e-78 | -8.615850e-47 |
| Msa0052780 | Msa1087890 | 0.801139 | 1.036659e-48 | -8.615850e-47 |
| Msa0053640 | Msa1087890 | 0.901642 | 2.179955e-78 | -8.615850e-47 |
| Msa0067590 | Msa1087890 | -0.802473 | 5.517508e-49 | -8.615850e-47 |
| Msa0076640 | Msa1087890 | 0.824287 | 8.757998e-54 | -8.615850e-47 |
| Msa0092220 | Msa1087890 | 0.825524 | 4.473575e-54 | -8.615850e-47 |
| Msa0097570 | Msa1087890 | 0.805522 | 1.281640e-49 | -8.615850e-47 |
| Msa0099260 | Msa1087890 | 0.877186 | 7.692327e-69 | -8.615850e-47 |
| Msa0626920 | Msa1087890 | 0.817165 | 3.798857e-52 | -8.615850e-47 |
| Msa0651870 | Msa1087890 | 0.820229 | 7.659608e-53 | -8.615850e-47 |
| Msa0651890 | Msa1087890 | 0.817461 | 3.259149e-52 | -8.615850e-47 |
| Msa0683200 | Msa1087890 | -0.829559 | 4.810680e-55 | -8.615850e-47 |
| Msa0689300 | Msa1087890 | 0.827947 | 1.180522e-54 | -8.615850e-47 |
| Msa0706110 | Msa1087890 | 0.814638 | 1.391248e-51 | -8.615850e-47 |
| Msa0758830 | Msa1087890 | 0.805921 | 1.056674e-49 | -8.615850e-47 |
| Msa0801320 | Msa1087890 | -0.805765 | 1.139585e-49 | -8.615850e-47 |
| Msa0832760 | Msa1087890 | 0.843892 | 1.059704e-58 | -8.615850e-47 |
| Msa0838640 | Msa1087890 | 0.813416 | 2.587586e-51 | -8.615850e-47 |
| Msa0838650 | Msa1087890 | 0.827415 | 1.584129e-54 | -8.615850e-47 |
| Msa0145430 | Msa1087890 | 0.817735 | 2.826871e-52 | -8.615850e-47 |
| Msa0148040 | Msa1087890 | 0.892821 | 1.114932e-74 | -8.615850e-47 |
| Msa0173950 | Msa1087890 | -0.804937 | 1.699868e-49 | -8.615850e-47 |
| Msa0177320 | Msa1087890 | 0.816765 | 4.670547e-52 | -8.615850e-47 |
| Msa0186400 | Msa1087890 | -0.809107 | 2.228205e-50 | -8.615850e-47 |
| Msa0233920 | Msa1087890 | 0.997385 | 1.312370e-241 | -8.615850e-47 |
| Msa0386890 | Msa1087890 | 0.802353 | 5.840175e-49 | -8.615850e-47 |
| Msa0390590 | Msa1087890 | -0.800987 | 1.113606e-48 | -8.615850e-47 |
| Msa0403750 | Msa1087890 | 0.859334 | 4.443905e-63 | -8.615850e-47 |
| Msa0403790 | Msa1087890 | 0.837680 | 4.506670e-57 | -8.615850e-47 |
| Msa0403860 | Msa1087890 | 0.857908 | 1.184474e-62 | -8.615850e-47 |
| Msa0436930 | Msa1087890 | -0.800891 | 1.164894e-48 | -8.615850e-47 |
| Msa0460760 | Msa1087890 | 0.831800 | 1.359528e-55 | -8.615850e-47 |
| Msa0464850 | Msa1087890 | 0.828077 | 1.098337e-54 | -8.615850e-47 |
| Msa0481310 | Msa1087890 | 0.803733 | 3.027642e-49 | -8.615850e-47 |
| Msa0982550 | Msa1087890 | 0.851348 | 9.413112e-61 | -8.615850e-47 |
| Msa1038350 | Msa1087890 | 0.800614 | 1.326769e-48 | -8.615850e-47 |
| Msa1087890 | Msa1129420 | 0.908322 | 1.940917e-81 | -8.615850e-47 |
| Msa1087890 | Msa1157130 | 0.802549 | 5.321586e-49 | -8.615850e-47 |
| Msa1087890 | Msa1173150 | 0.802173 | 6.360699e-49 | -8.615850e-47 |
| Msa1087890 | Msa1221960 | 0.825240 | 5.222849e-54 | -8.615850e-47 |
| Msa1087890 | Msa1249600 | 0.817938 | 2.543479e-52 | -8.615850e-47 |
| Msa1087890 | Msa1265020 | 0.826258 | 2.993416e-54 | -8.615850e-47 |
| Msa1087890 | Msa1312770 | 0.805772 | 1.135908e-49 | -8.615850e-47 |
| Msa1087890 | Msa1337850 | 0.843568 | 1.293269e-58 | -8.615850e-47 |
| Msa1087890 | Msa1363280 | -0.869374 | 3.247925e-66 | -8.615850e-47 |
| Msa1087890 | Msa1363310 | -0.802225 | 6.206419e-49 | -8.615850e-47 |
| Msa1087890 | Msa1368400 | 0.802191 | 6.306586e-49 | -8.615850e-47 |
| Msa1087890 | Msa1385970 | 0.994919 | 2.270825e-211 | -8.615850e-47 |
| Msa1087890 | Msa1386580 | -0.802180 | 6.341193e-49 | -8.615850e-47 |
| Msa1087890 | Msa1405510 | 0.800694 | 1.277943e-48 | -8.615850e-47 |
| Msa1087890 | Msa1417110 | 0.996484 | 4.074740e-228 | -8.615850e-47 |
| Msa1087890 | Msa1441330 | 0.855099 | 7.914945e-62 | -8.615850e-47 |
| Msa1087890 | Msa1443220 | 0.843579 | 1.284595e-58 | -8.615850e-47 |
| Msa1087890 | Msa1453430 | 0.832223 | 1.068740e-55 | -8.615850e-47 |
| Msa0294200 | Msa1087890 | 0.823868 | 1.098450e-53 | -8.615850e-47 |
| Msa0307380 | Msa1087890 | 0.811540 | 6.651322e-51 | -8.615850e-47 |
| Msa0312640 | Msa1087890 | 0.956426 | 3.032257e-114 | -8.615850e-47 |
| Msa0484400 | Msa1087890 | 0.854665 | 1.058089e-61 | -8.615850e-47 |
| Msa0502900 | Msa1087890 | -0.808963 | 2.391882e-50 | -8.615850e-47 |
| Msa0510520 | Msa1087890 | 0.804119 | 2.516949e-49 | -8.615850e-47 |
| Msa0523420 | Msa1087890 | -0.818662 | 1.743663e-52 | -8.615850e-47 |
| Msa0526490 | Msa1087890 | -0.816160 | 6.382511e-52 | -8.615850e-47 |
| Msa0526500 | Msa1087890 | -0.864733 | 9.831435e-65 | -8.615850e-47 |
| Msa0548160 | Msa1087890 | -0.828424 | 9.059375e-55 | -8.615850e-47 |
| Msa0563440 | Msa1087890 | 0.850321 | 1.831287e-60 | -8.615850e-47 |
| Msa0577730 | Msa1087890 | 0.816075 | 6.665662e-52 | -8.615850e-47 |
| Msa0602320 | Msa1087890 | -0.804435 | 2.162960e-49 | -8.615850e-47 |
| Msa0969380 | Msa1087890 | 0.846171 | 2.568069e-59 | -8.615850e-47 |
| Msa0969590 | Msa1087890 | 0.843576 | 1.287268e-58 | -8.615850e-47 |
| Msa0969720 | Msa1087890 | 0.838838 | 2.266920e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1087890 | MtrunA17_Chr2g0281901 | 99.602 | 251 | 1 | 0 | 1 | 251 | 1 | 251 | 0.0 | 523 |
| Msa1087890 | MtrunA17_Chr4g0047531 | 74.704 | 253 | 62 | 2 | 1 | 251 | 64 | 316 | 3.06e-136 | 386 |
| Msa1087890 | MtrunA17_Chr2g0317901 | 66.800 | 250 | 82 | 1 | 1 | 249 | 1 | 250 | 3.55e-113 | 325 |
| Msa1087890 | MtrunA17_Chr1g0166351 | 46.000 | 250 | 131 | 3 | 1 | 248 | 1 | 248 | 1.99e-81 | 244 |
| Msa1087890 | MtrunA17_Chr1g0204611 | 42.972 | 249 | 138 | 2 | 1 | 247 | 1 | 247 | 6.08e-78 | 235 |
| Msa1087890 | MtrunA17_Chr2g0287871 | 40.870 | 230 | 132 | 3 | 1 | 229 | 1 | 227 | 2.52e-58 | 185 |
| Msa1087890 | MtrunA17_Chr4g0065571 | 38.261 | 230 | 139 | 2 | 1 | 229 | 1 | 228 | 1.05e-57 | 183 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1087890 | AT4G27450.1 | 65.060 | 249 | 85 | 2 | 1 | 247 | 1 | 249 | 3.31e-117 | 335 |
| Msa1087890 | AT3G15450.1 | 61.847 | 249 | 92 | 3 | 1 | 247 | 1 | 248 | 3.99e-109 | 315 |
| Msa1087890 | AT5G43830.1 | 45.783 | 249 | 132 | 2 | 1 | 247 | 1 | 248 | 8.93e-81 | 243 |
| Msa1087890 | AT3G15450.2 | 59.896 | 192 | 74 | 3 | 1 | 190 | 1 | 191 | 3.09e-76 | 230 |
| Msa1087890 | AT3G22850.1 | 41.700 | 247 | 142 | 1 | 1 | 247 | 1 | 245 | 9.15e-73 | 223 |
| Msa1087890 | AT3G15450.3 | 59.649 | 171 | 66 | 3 | 1 | 169 | 1 | 170 | 5.06e-64 | 198 |
| Msa1087890 | AT5G19140.1 | 42.174 | 230 | 129 | 3 | 1 | 229 | 1 | 227 | 2.46e-60 | 190 |
| Msa1087890 | AT5G19140.2 | 39.056 | 233 | 126 | 4 | 1 | 232 | 1 | 218 | 6.19e-52 | 169 |
| Msa1087890 | AT5G19140.3 | 45.833 | 168 | 88 | 2 | 66 | 232 | 29 | 194 | 1.57e-50 | 164 |
Find 75 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGGTTATTTCTGAAAATT+TGG | 0.186131 | 7_3:+657532 | Msa1087890:CDS |
| GAGCAACTTATTAGTCCTTT+TGG | 0.192738 | 7_3:+658047 | Msa1087890:three_prime_UTR |
| AGGCATTGCTTTCATCTTCT+TGG | 0.213186 | 7_3:-657850 | None:intergenic |
| CAACATATACTGTGCTTTCA+TGG | 0.289891 | 7_3:+657168 | Msa1087890:CDS |
| CTGAGAATCAACATTGAAAT+TGG | 0.290530 | 7_3:-657904 | None:intergenic |
| TAGGGTTCTGATGGCCATAT+TGG | 0.309694 | 7_3:+657479 | Msa1087890:intron |
| GCGTCGGAAGTGAAGCTAAC+TGG | 0.331100 | 7_3:+657949 | Msa1087890:CDS |
| GGGTTTGTTTGAAGGGGAAT+AGG | 0.347155 | 7_3:-656660 | None:intergenic |
| TGGCCATATTGGACTCTATT+GGG | 0.347166 | 7_3:+657490 | Msa1087890:CDS |
| CAAGAAATGGAGATTGAAAA+TGG | 0.365031 | 7_3:-656322 | None:intergenic |
| AACTGCCTTCAAGTTCTTTG+AGG | 0.369411 | 7_3:-657318 | None:intergenic |
| GTGAAGCTAACTGGGCTACT+TGG | 0.380329 | 7_3:+657958 | Msa1087890:CDS |
| AAACTTCGTGTTATTCATAT+CGG | 0.383357 | 7_3:-658146 | None:intergenic |
| ACACAGGTTGTTTAGTGGTT+TGG | 0.384227 | 7_3:+657144 | Msa1087890:intron |
| GCTGGACTGTTAAGCTCCTT+TGG | 0.386416 | 7_3:-656527 | None:intergenic |
| ATGGCCATATTGGACTCTAT+TGG | 0.399544 | 7_3:+657489 | Msa1087890:CDS |
| GGTCATGTAAAATGCATTAG+AGG | 0.401764 | 7_3:-656615 | None:intergenic |
| AAAATGAACATGCCAAGAAA+TGG | 0.410585 | 7_3:-656335 | None:intergenic |
| TATAGCATACCTTTGATGAA+TGG | 0.418351 | 7_3:-656684 | None:intergenic |
| AGAAGACACTGAAATTGATT+AGG | 0.428037 | 7_3:-658177 | None:intergenic |
| TTGGATGCTCAAAGTTCAAC+AGG | 0.429617 | 7_3:-657827 | None:intergenic |
| GATCTAGAAGAAAACATGTT+GGG | 0.430615 | 7_3:+656476 | Msa1087890:exon |
| TGAAGCTAACTGGGCTACTT+GGG | 0.434720 | 7_3:+657959 | Msa1087890:CDS |
| AGTCAATTAAACAAGCAGTA+TGG | 0.435366 | 7_3:+657208 | Msa1087890:CDS |
| TTGTCACACAGGTTGTTTAG+TGG | 0.439422 | 7_3:+657139 | Msa1087890:intron |
| TACCCCAATAGAGTCCAATA+TGG | 0.456193 | 7_3:-657493 | None:intergenic |
| ATTGCTTTCATCTTCTTGGT+TGG | 0.456752 | 7_3:-657846 | None:intergenic |
| AGGACTTGATCAGCAGGGTA+TGG | 0.462918 | 7_3:-657298 | None:intergenic |
| ATATACATACCAGTTGGAAA+TGG | 0.462995 | 7_3:-657590 | None:intergenic |
| TCATTTGCACCATTTCCAAC+TGG | 0.471531 | 7_3:+657581 | Msa1087890:CDS |
| ATTTGTGATCTATGATCATA+AGG | 0.473807 | 7_3:+657345 | Msa1087890:CDS |
| TCTCTAAGAATTTCATGACT+TGG | 0.475577 | 7_3:-656575 | None:intergenic |
| CAAGTCCTCAAAGAACTTGA+AGG | 0.477517 | 7_3:+657313 | Msa1087890:CDS |
| TGTTTATCATCGAAGCATAT+CGG | 0.480407 | 7_3:+657257 | Msa1087890:CDS |
| TGAATGGAGGGTTTGTTTGA+AGG | 0.484201 | 7_3:-656668 | None:intergenic |
| CATATCGGACACTTCGTGAC+AGG | 0.489174 | 7_3:+657272 | Msa1087890:CDS |
| CAAGCAGTATGGACTATCAA+AGG | 0.492197 | 7_3:+657219 | Msa1087890:CDS |
| AAGGACTAATAAGTTGCTCT+TGG | 0.494089 | 7_3:-658043 | None:intergenic |
| GTGTTTGATTAGGGTTCTGA+TGG | 0.494123 | 7_3:+657470 | Msa1087890:intron |
| GAATGGAGGGTTTGTTTGAA+GGG | 0.511713 | 7_3:-656667 | None:intergenic |
| CGTCGGAAGTGAAGCTAACT+GGG | 0.514379 | 7_3:+657950 | Msa1087890:CDS |
| TGTTTGTTTCATAGTGAGCA+TGG | 0.516434 | 7_3:+657804 | Msa1087890:CDS |
| AACATATACTGTGCTTTCAT+GGG | 0.516602 | 7_3:+657169 | Msa1087890:CDS |
| AGCTTCTAATTCACACACTA+AGG | 0.518797 | 7_3:+656547 | Msa1087890:CDS |
| TCTTTGAGGACTTGATCAGC+AGG | 0.520998 | 7_3:-657304 | None:intergenic |
| TTAATTGACTAAGATTATGC+AGG | 0.523474 | 7_3:-657195 | None:intergenic |
| AGCATACCTTTGATGAATGG+AGG | 0.526703 | 7_3:-656681 | None:intergenic |
| GCATACCTTTGATGAATGGA+GGG | 0.530944 | 7_3:-656680 | None:intergenic |
| GTGATCTATGATCATAAGGA+TGG | 0.533318 | 7_3:+657349 | Msa1087890:CDS |
| TATTGCTGCTGATGGTTCTG+TGG | 0.539065 | 7_3:+657514 | Msa1087890:CDS |
| ACACCCTCACTGTCTATCCT+AGG | 0.539998 | 7_3:-657870 | None:intergenic |
| TATTGGGGTATTGCTGCTGA+TGG | 0.541579 | 7_3:+657506 | Msa1087890:CDS |
| AATGGAGGGTTTGTTTGAAG+GGG | 0.545512 | 7_3:-656666 | None:intergenic |
| TTAGTGTGTGAATTAGAAGC+TGG | 0.552483 | 7_3:-656545 | None:intergenic |
| TGATCTAGAAGAAAACATGT+TGG | 0.552714 | 7_3:+656475 | Msa1087890:exon |
| AGAAGATGAAAGCAATGCCT+AGG | 0.563928 | 7_3:+657853 | Msa1087890:CDS |
| AAGCAGTATGGACTATCAAA+GGG | 0.565561 | 7_3:+657220 | Msa1087890:CDS |
| GACAGTGAGGGTGTTATGTG+TGG | 0.584626 | 7_3:+657879 | Msa1087890:CDS |
| ACAAACCCTCCATTCATCAA+AGG | 0.600022 | 7_3:+656675 | Msa1087890:CDS |
| TTAGCTTCACTTCCGACGCG+TGG | 0.602591 | 7_3:-657945 | None:intergenic |
| AAAGTTGGTTAATGCACCAA+AGG | 0.604581 | 7_3:+656511 | Msa1087890:CDS |
| TCAATGTTGATTCTCAGTCG+AGG | 0.609359 | 7_3:+657910 | Msa1087890:CDS |
| AATCAAATGATGCCACGCGT+CGG | 0.614420 | 7_3:+657933 | Msa1087890:CDS |
| ATATCGGACACTTCGTGACA+GGG | 0.614896 | 7_3:+657273 | Msa1087890:CDS |
| CTTTGAGGACTTGATCAGCA+GGG | 0.622312 | 7_3:-657303 | None:intergenic |
| TAATAAAGCATCATTTCCAA+AGG | 0.630341 | 7_3:-656636 | None:intergenic |
| GAAGCTAACTGGGCTACTTG+GGG | 0.631415 | 7_3:+657960 | Msa1087890:CDS |
| GGCCATATTGGACTCTATTG+GGG | 0.633432 | 7_3:+657491 | Msa1087890:CDS |
| ACAGTGAGGGTGTTATGTGT+GGG | 0.635934 | 7_3:+657880 | Msa1087890:CDS |
| ATGCCTAGGATAGACAGTGA+GGG | 0.675197 | 7_3:+657867 | Msa1087890:CDS |
| CAGTATGGACTATCAAAGGG+AGG | 0.687799 | 7_3:+657223 | Msa1087890:CDS |
| CAGTGAGGGTGTTATGTGTG+GGG | 0.693979 | 7_3:+657881 | Msa1087890:CDS |
| TATCGGACACTTCGTGACAG+GGG | 0.696194 | 7_3:+657274 | Msa1087890:CDS |
| AATGCCTAGGATAGACAGTG+AGG | 0.696652 | 7_3:+657866 | Msa1087890:CDS |
| ACTATCAAAGGGAGGCAACG+AGG | 0.706158 | 7_3:+657231 | Msa1087890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCATTAGTTTATAATTAGA+AGG | - | chr7_3:656714-656733 | None:intergenic | 15.0% |
| !!! | TATATAATTTTAGCTTCTAT+AGG | + | chr7_3:656864-656883 | Msa1087890:intron | 15.0% |
| !! | TCAATTAATTAGTCAAAAAA+AGG | - | chr7_3:657439-657458 | None:intergenic | 15.0% |
| !!! | ATCATTAGTTTATAATTAGA+AGG | - | chr7_3:656714-656733 | None:intergenic | 15.0% |
| !!! | TATATAATTTTAGCTTCTAT+AGG | + | chr7_3:656864-656883 | Msa1087890:intron | 15.0% |
| !! | TCAATTAATTAGTCAAAAAA+AGG | - | chr7_3:657439-657458 | None:intergenic | 15.0% |
| !! | AATTATGTTTGTGTTTGATT+AGG | + | chr7_3:657460-657479 | Msa1087890:intron | 20.0% |
| !! | ATTATGTTTGTGTTTGATTA+GGG | + | chr7_3:657461-657480 | Msa1087890:intron | 20.0% |
| !! | AATAACCATTTAGATCAAAT+TGG | + | chr7_3:657707-657726 | Msa1087890:intron | 20.0% |
| !! | TTAAATGTTGTTGAAATTTC+AGG | + | chr7_3:657780-657799 | Msa1087890:intron | 20.0% |
| !! | TAAATGTTGTTGAAATTTCA+GGG | + | chr7_3:657781-657800 | Msa1087890:intron | 20.0% |
| !! | AATTATGTTTGTGTTTGATT+AGG | + | chr7_3:657460-657479 | Msa1087890:intron | 20.0% |
| !! | ATTATGTTTGTGTTTGATTA+GGG | + | chr7_3:657461-657480 | Msa1087890:intron | 20.0% |
| !! | AATAACCATTTAGATCAAAT+TGG | + | chr7_3:657707-657726 | Msa1087890:intron | 20.0% |
| !! | TTAAATGTTGTTGAAATTTC+AGG | + | chr7_3:657780-657799 | Msa1087890:intron | 20.0% |
| !! | TAAATGTTGTTGAAATTTCA+GGG | + | chr7_3:657781-657800 | Msa1087890:intron | 20.0% |
| !! | TAATAAAGCATCATTTCCAA+AGG | - | chr7_3:656639-656658 | None:intergenic | 25.0% |
| ! | CTAATCTTAGACATAAACTT+AGG | - | chr7_3:656919-656938 | None:intergenic | 25.0% |
| ! | ATAATATTAGGTCAAACTAC+TGG | + | chr7_3:656984-657003 | Msa1087890:intron | 25.0% |
| ! | CTAGATCTAGGTAAATAAAA+AGG | + | chr7_3:657058-657077 | Msa1087890:intron | 25.0% |
| ! | TTAATTGACTAAGATTATGC+AGG | - | chr7_3:657198-657217 | None:intergenic | 25.0% |
| ! | ATTTGTGATCTATGATCATA+AGG | + | chr7_3:657345-657364 | Msa1087890:CDS | 25.0% |
| !!! | TAATTTTTTCCAACGTTTAG+AGG | - | chr7_3:657415-657434 | None:intergenic | 25.0% |
| !!! | TGTGGTTATTTCTGAAAATT+TGG | + | chr7_3:657532-657551 | Msa1087890:CDS | 25.0% |
| ! | TCATTTATGATCTTTCCATA+GGG | - | chr7_3:657646-657665 | None:intergenic | 25.0% |
| ! | ATCATTTATGATCTTTCCAT+AGG | - | chr7_3:657647-657666 | None:intergenic | 25.0% |
| ! | CAAAAACTAAATATCCCAAA+AGG | - | chr7_3:658065-658084 | None:intergenic | 25.0% |
| !!! | GATATTTAGTTTTTGTCGTT+TGG | + | chr7_3:658070-658089 | Msa1087890:three_prime_UTR | 25.0% |
| !! | AAACTTCGTGTTATTCATAT+CGG | - | chr7_3:658149-658168 | None:intergenic | 25.0% |
| !! | TAATAAAGCATCATTTCCAA+AGG | - | chr7_3:656639-656658 | None:intergenic | 25.0% |
| ! | CTAATCTTAGACATAAACTT+AGG | - | chr7_3:656919-656938 | None:intergenic | 25.0% |
| ! | ATAATATTAGGTCAAACTAC+TGG | + | chr7_3:656984-657003 | Msa1087890:intron | 25.0% |
| ! | CTAGATCTAGGTAAATAAAA+AGG | + | chr7_3:657058-657077 | Msa1087890:intron | 25.0% |
| ! | TTAATTGACTAAGATTATGC+AGG | - | chr7_3:657198-657217 | None:intergenic | 25.0% |
| ! | ATTTGTGATCTATGATCATA+AGG | + | chr7_3:657345-657364 | Msa1087890:CDS | 25.0% |
| !!! | TAATTTTTTCCAACGTTTAG+AGG | - | chr7_3:657415-657434 | None:intergenic | 25.0% |
| !!! | TGTGGTTATTTCTGAAAATT+TGG | + | chr7_3:657532-657551 | Msa1087890:CDS | 25.0% |
| ! | TCATTTATGATCTTTCCATA+GGG | - | chr7_3:657646-657665 | None:intergenic | 25.0% |
| ! | ATCATTTATGATCTTTCCAT+AGG | - | chr7_3:657647-657666 | None:intergenic | 25.0% |
| ! | CAAAAACTAAATATCCCAAA+AGG | - | chr7_3:658065-658084 | None:intergenic | 25.0% |
| !!! | GATATTTAGTTTTTGTCGTT+TGG | + | chr7_3:658070-658089 | Msa1087890:three_prime_UTR | 25.0% |
| !! | AAACTTCGTGTTATTCATAT+CGG | - | chr7_3:658149-658168 | None:intergenic | 25.0% |
| CAAGAAATGGAGATTGAAAA+TGG | - | chr7_3:656325-656344 | None:intergenic | 30.0% | |
| ! | CATTTTCAATCTCCATTTCT+TGG | + | chr7_3:656323-656342 | Msa1087890:five_prime_UTR | 30.0% |
| AAAATGAACATGCCAAGAAA+TGG | - | chr7_3:656338-656357 | None:intergenic | 30.0% | |
| TGATCTAGAAGAAAACATGT+TGG | + | chr7_3:656475-656494 | Msa1087890:exon | 30.0% | |
| GATCTAGAAGAAAACATGTT+GGG | + | chr7_3:656476-656495 | Msa1087890:exon | 30.0% | |
| ! | AAACATGTTGGGAATTTTCA+AGG | + | chr7_3:656487-656506 | Msa1087890:exon | 30.0% |
| ! | TCTCTAAGAATTTCATGACT+TGG | - | chr7_3:656578-656597 | None:intergenic | 30.0% |
| ! | AATGCATTTTACATGACCTT+TGG | + | chr7_3:656620-656639 | Msa1087890:CDS | 30.0% |
| TATAGCATACCTTTGATGAA+TGG | - | chr7_3:656687-656706 | None:intergenic | 30.0% | |
| ! | GCATATAATCTTTTCTCCTA+CGG | - | chr7_3:656951-656970 | None:intergenic | 30.0% |
| ! | TATTTACCTAGATCTAGTTC+AGG | - | chr7_3:657055-657074 | None:intergenic | 30.0% |
| AACATATACTGTGCTTTCAT+GGG | + | chr7_3:657169-657188 | Msa1087890:CDS | 30.0% | |
| AGTCAATTAAACAAGCAGTA+TGG | + | chr7_3:657208-657227 | Msa1087890:CDS | 30.0% | |
| TGTTTATCATCGAAGCATAT+CGG | + | chr7_3:657257-657276 | Msa1087890:CDS | 30.0% | |
| ATATACATACCAGTTGGAAA+TGG | - | chr7_3:657593-657612 | None:intergenic | 30.0% | |
| TTCCAACTGGTATGTATATT+TGG | + | chr7_3:657594-657613 | Msa1087890:intron | 30.0% | |
| AACCAAATATACATACCAGT+TGG | - | chr7_3:657599-657618 | None:intergenic | 30.0% | |
| !! | ATGAGTTTTTAACTACCCTA+TGG | + | chr7_3:657628-657647 | Msa1087890:intron | 30.0% |
| GTATGCCAATTTGATCTAAA+TGG | - | chr7_3:657715-657734 | None:intergenic | 30.0% | |
| ATAATGTGCGAAATTGTCTA+TGG | + | chr7_3:657739-657758 | Msa1087890:intron | 30.0% | |
| TAATGTGCGAAATTGTCTAT+GGG | + | chr7_3:657740-657759 | Msa1087890:intron | 30.0% | |
| CTGAGAATCAACATTGAAAT+TGG | - | chr7_3:657907-657926 | None:intergenic | 30.0% | |
| ! | AGCAACTTATTAGTCCTTTT+GGG | + | chr7_3:658048-658067 | Msa1087890:three_prime_UTR | 30.0% |
| CAAGAAATGGAGATTGAAAA+TGG | - | chr7_3:656325-656344 | None:intergenic | 30.0% | |
| ! | CATTTTCAATCTCCATTTCT+TGG | + | chr7_3:656323-656342 | Msa1087890:five_prime_UTR | 30.0% |
| AAAATGAACATGCCAAGAAA+TGG | - | chr7_3:656338-656357 | None:intergenic | 30.0% | |
| TGATCTAGAAGAAAACATGT+TGG | + | chr7_3:656475-656494 | Msa1087890:exon | 30.0% | |
| GATCTAGAAGAAAACATGTT+GGG | + | chr7_3:656476-656495 | Msa1087890:exon | 30.0% | |
| ! | AAACATGTTGGGAATTTTCA+AGG | + | chr7_3:656487-656506 | Msa1087890:exon | 30.0% |
| ! | TCTCTAAGAATTTCATGACT+TGG | - | chr7_3:656578-656597 | None:intergenic | 30.0% |
| ! | AATGCATTTTACATGACCTT+TGG | + | chr7_3:656620-656639 | Msa1087890:CDS | 30.0% |
| TATAGCATACCTTTGATGAA+TGG | - | chr7_3:656687-656706 | None:intergenic | 30.0% | |
| ! | GCATATAATCTTTTCTCCTA+CGG | - | chr7_3:656951-656970 | None:intergenic | 30.0% |
| ! | TATTTACCTAGATCTAGTTC+AGG | - | chr7_3:657055-657074 | None:intergenic | 30.0% |
| AACATATACTGTGCTTTCAT+GGG | + | chr7_3:657169-657188 | Msa1087890:CDS | 30.0% | |
| AGTCAATTAAACAAGCAGTA+TGG | + | chr7_3:657208-657227 | Msa1087890:CDS | 30.0% | |
| TGTTTATCATCGAAGCATAT+CGG | + | chr7_3:657257-657276 | Msa1087890:CDS | 30.0% | |
| ATATACATACCAGTTGGAAA+TGG | - | chr7_3:657593-657612 | None:intergenic | 30.0% | |
| TTCCAACTGGTATGTATATT+TGG | + | chr7_3:657594-657613 | Msa1087890:intron | 30.0% | |
| AACCAAATATACATACCAGT+TGG | - | chr7_3:657599-657618 | None:intergenic | 30.0% | |
| !! | ATGAGTTTTTAACTACCCTA+TGG | + | chr7_3:657628-657647 | Msa1087890:intron | 30.0% |
| GTATGCCAATTTGATCTAAA+TGG | - | chr7_3:657715-657734 | None:intergenic | 30.0% | |
| ATAATGTGCGAAATTGTCTA+TGG | + | chr7_3:657739-657758 | Msa1087890:intron | 30.0% | |
| TAATGTGCGAAATTGTCTAT+GGG | + | chr7_3:657740-657759 | Msa1087890:intron | 30.0% | |
| CTGAGAATCAACATTGAAAT+TGG | - | chr7_3:657907-657926 | None:intergenic | 30.0% | |
| ! | AGCAACTTATTAGTCCTTTT+GGG | + | chr7_3:658048-658067 | Msa1087890:three_prime_UTR | 30.0% |
| !! | GGGAATTTTCAAGGAAAAGT+TGG | + | chr7_3:656496-656515 | Msa1087890:CDS | 35.0% |
| ! | AAAGTTGGTTAATGCACCAA+AGG | + | chr7_3:656511-656530 | Msa1087890:CDS | 35.0% |
| TTAGTGTGTGAATTAGAAGC+TGG | - | chr7_3:656548-656567 | None:intergenic | 35.0% | |
| AGCTTCTAATTCACACACTA+AGG | + | chr7_3:656547-656566 | Msa1087890:CDS | 35.0% | |
| GGTCATGTAAAATGCATTAG+AGG | - | chr7_3:656618-656637 | None:intergenic | 35.0% | |
| TAGGTTTCAGATCTGATTGT+AGG | + | chr7_3:656883-656902 | Msa1087890:intron | 35.0% | |
| AAATGACCTGAACTAGATCT+AGG | + | chr7_3:657046-657065 | Msa1087890:intron | 35.0% | |
| !! | AAATGTGTCATTTGTCACAC+AGG | + | chr7_3:657128-657147 | Msa1087890:intron | 35.0% |
| CAACATATACTGTGCTTTCA+TGG | + | chr7_3:657168-657187 | Msa1087890:CDS | 35.0% | |
| ! | AAGCAGTATGGACTATCAAA+GGG | + | chr7_3:657220-657239 | Msa1087890:CDS | 35.0% |
| GTGATCTATGATCATAAGGA+TGG | + | chr7_3:657349-657368 | Msa1087890:CDS | 35.0% | |
| ! | CTTAATTAGCCTCTAAACGT+TGG | + | chr7_3:657403-657422 | Msa1087890:intron | 35.0% |
| TGTTTGTTTCATAGTGAGCA+TGG | + | chr7_3:657804-657823 | Msa1087890:CDS | 35.0% | |
| ATTGCTTTCATCTTCTTGGT+TGG | - | chr7_3:657849-657868 | None:intergenic | 35.0% | |
| AAGGACTAATAAGTTGCTCT+TGG | - | chr7_3:658046-658065 | None:intergenic | 35.0% | |
| ! | GAGCAACTTATTAGTCCTTT+TGG | + | chr7_3:658047-658066 | Msa1087890:three_prime_UTR | 35.0% |
| !! | GGGAATTTTCAAGGAAAAGT+TGG | + | chr7_3:656496-656515 | Msa1087890:CDS | 35.0% |
| ! | AAAGTTGGTTAATGCACCAA+AGG | + | chr7_3:656511-656530 | Msa1087890:CDS | 35.0% |
| TTAGTGTGTGAATTAGAAGC+TGG | - | chr7_3:656548-656567 | None:intergenic | 35.0% | |
| AGCTTCTAATTCACACACTA+AGG | + | chr7_3:656547-656566 | Msa1087890:CDS | 35.0% | |
| GGTCATGTAAAATGCATTAG+AGG | - | chr7_3:656618-656637 | None:intergenic | 35.0% | |
| TAGGTTTCAGATCTGATTGT+AGG | + | chr7_3:656883-656902 | Msa1087890:intron | 35.0% | |
| AAATGACCTGAACTAGATCT+AGG | + | chr7_3:657046-657065 | Msa1087890:intron | 35.0% | |
| !! | AAATGTGTCATTTGTCACAC+AGG | + | chr7_3:657128-657147 | Msa1087890:intron | 35.0% |
| CAACATATACTGTGCTTTCA+TGG | + | chr7_3:657168-657187 | Msa1087890:CDS | 35.0% | |
| ! | AAGCAGTATGGACTATCAAA+GGG | + | chr7_3:657220-657239 | Msa1087890:CDS | 35.0% |
| GTGATCTATGATCATAAGGA+TGG | + | chr7_3:657349-657368 | Msa1087890:CDS | 35.0% | |
| ! | CTTAATTAGCCTCTAAACGT+TGG | + | chr7_3:657403-657422 | Msa1087890:intron | 35.0% |
| TGTTTGTTTCATAGTGAGCA+TGG | + | chr7_3:657804-657823 | Msa1087890:CDS | 35.0% | |
| ATTGCTTTCATCTTCTTGGT+TGG | - | chr7_3:657849-657868 | None:intergenic | 35.0% | |
| AAGGACTAATAAGTTGCTCT+TGG | - | chr7_3:658046-658065 | None:intergenic | 35.0% | |
| ! | GAGCAACTTATTAGTCCTTT+TGG | + | chr7_3:658047-658066 | Msa1087890:three_prime_UTR | 35.0% |
| ! | AATGGAGGGTTTGTTTGAAG+GGG | - | chr7_3:656669-656688 | None:intergenic | 40.0% |
| ! | GAATGGAGGGTTTGTTTGAA+GGG | - | chr7_3:656670-656689 | None:intergenic | 40.0% |
| ! | TGAATGGAGGGTTTGTTTGA+AGG | - | chr7_3:656671-656690 | None:intergenic | 40.0% |
| ACAAACCCTCCATTCATCAA+AGG | + | chr7_3:656675-656694 | Msa1087890:CDS | 40.0% | |
| GCATACCTTTGATGAATGGA+GGG | - | chr7_3:656683-656702 | None:intergenic | 40.0% | |
| AGCATACCTTTGATGAATGG+AGG | - | chr7_3:656684-656703 | None:intergenic | 40.0% | |
| TTGTCACACAGGTTGTTTAG+TGG | + | chr7_3:657139-657158 | Msa1087890:intron | 40.0% | |
| ACACAGGTTGTTTAGTGGTT+TGG | + | chr7_3:657144-657163 | Msa1087890:intron | 40.0% | |
| ! | CAAGCAGTATGGACTATCAA+AGG | + | chr7_3:657219-657238 | Msa1087890:CDS | 40.0% |
| CAAGTCCTCAAAGAACTTGA+AGG | + | chr7_3:657313-657332 | Msa1087890:CDS | 40.0% | |
| ! | AACTGCCTTCAAGTTCTTTG+AGG | - | chr7_3:657321-657340 | None:intergenic | 40.0% |
| ! | GTGTTTGATTAGGGTTCTGA+TGG | + | chr7_3:657470-657489 | Msa1087890:intron | 40.0% |
| ATGGCCATATTGGACTCTAT+TGG | + | chr7_3:657489-657508 | Msa1087890:CDS | 40.0% | |
| TGGCCATATTGGACTCTATT+GGG | + | chr7_3:657490-657509 | Msa1087890:CDS | 40.0% | |
| TACCCCAATAGAGTCCAATA+TGG | - | chr7_3:657496-657515 | None:intergenic | 40.0% | |
| TCATTTGCACCATTTCCAAC+TGG | + | chr7_3:657581-657600 | Msa1087890:CDS | 40.0% | |
| TTGGATGCTCAAAGTTCAAC+AGG | - | chr7_3:657830-657849 | None:intergenic | 40.0% | |
| ! | AGGCATTGCTTTCATCTTCT+TGG | - | chr7_3:657853-657872 | None:intergenic | 40.0% |
| AGAAGATGAAAGCAATGCCT+AGG | + | chr7_3:657853-657872 | Msa1087890:CDS | 40.0% | |
| !! | TCAATGTTGATTCTCAGTCG+AGG | + | chr7_3:657910-657929 | Msa1087890:CDS | 40.0% |
| ! | AATGGAGGGTTTGTTTGAAG+GGG | - | chr7_3:656669-656688 | None:intergenic | 40.0% |
| ! | GAATGGAGGGTTTGTTTGAA+GGG | - | chr7_3:656670-656689 | None:intergenic | 40.0% |
| ! | TGAATGGAGGGTTTGTTTGA+AGG | - | chr7_3:656671-656690 | None:intergenic | 40.0% |
| ACAAACCCTCCATTCATCAA+AGG | + | chr7_3:656675-656694 | Msa1087890:CDS | 40.0% | |
| GCATACCTTTGATGAATGGA+GGG | - | chr7_3:656683-656702 | None:intergenic | 40.0% | |
| AGCATACCTTTGATGAATGG+AGG | - | chr7_3:656684-656703 | None:intergenic | 40.0% | |
| TTGTCACACAGGTTGTTTAG+TGG | + | chr7_3:657139-657158 | Msa1087890:intron | 40.0% | |
| ACACAGGTTGTTTAGTGGTT+TGG | + | chr7_3:657144-657163 | Msa1087890:intron | 40.0% | |
| ! | CAAGCAGTATGGACTATCAA+AGG | + | chr7_3:657219-657238 | Msa1087890:CDS | 40.0% |
| CAAGTCCTCAAAGAACTTGA+AGG | + | chr7_3:657313-657332 | Msa1087890:CDS | 40.0% | |
| ! | AACTGCCTTCAAGTTCTTTG+AGG | - | chr7_3:657321-657340 | None:intergenic | 40.0% |
| ! | GTGTTTGATTAGGGTTCTGA+TGG | + | chr7_3:657470-657489 | Msa1087890:intron | 40.0% |
| ATGGCCATATTGGACTCTAT+TGG | + | chr7_3:657489-657508 | Msa1087890:CDS | 40.0% | |
| TGGCCATATTGGACTCTATT+GGG | + | chr7_3:657490-657509 | Msa1087890:CDS | 40.0% | |
| TACCCCAATAGAGTCCAATA+TGG | - | chr7_3:657496-657515 | None:intergenic | 40.0% | |
| TCATTTGCACCATTTCCAAC+TGG | + | chr7_3:657581-657600 | Msa1087890:CDS | 40.0% | |
| TTGGATGCTCAAAGTTCAAC+AGG | - | chr7_3:657830-657849 | None:intergenic | 40.0% | |
| ! | AGGCATTGCTTTCATCTTCT+TGG | - | chr7_3:657853-657872 | None:intergenic | 40.0% |
| AGAAGATGAAAGCAATGCCT+AGG | + | chr7_3:657853-657872 | Msa1087890:CDS | 40.0% | |
| !! | TCAATGTTGATTCTCAGTCG+AGG | + | chr7_3:657910-657929 | Msa1087890:CDS | 40.0% |
| ! | GGGTTTGTTTGAAGGGGAAT+AGG | - | chr7_3:656663-656682 | None:intergenic | 45.0% |
| AGATTAGACCTGCAAACCGT+AGG | + | chr7_3:656932-656951 | Msa1087890:intron | 45.0% | |
| ! | TCTTTTCTCCTACGGTTTGC+AGG | - | chr7_3:656943-656962 | None:intergenic | 45.0% |
| ! | CAGTATGGACTATCAAAGGG+AGG | + | chr7_3:657223-657242 | Msa1087890:CDS | 45.0% |
| ATATCGGACACTTCGTGACA+GGG | + | chr7_3:657273-657292 | Msa1087890:CDS | 45.0% | |
| ! | CTTTGAGGACTTGATCAGCA+GGG | - | chr7_3:657306-657325 | None:intergenic | 45.0% |
| ! | TCTTTGAGGACTTGATCAGC+AGG | - | chr7_3:657307-657326 | None:intergenic | 45.0% |
| ! | TAGGGTTCTGATGGCCATAT+TGG | + | chr7_3:657479-657498 | Msa1087890:intron | 45.0% |
| GGCCATATTGGACTCTATTG+GGG | + | chr7_3:657491-657510 | Msa1087890:CDS | 45.0% | |
| !! | TATTGGGGTATTGCTGCTGA+TGG | + | chr7_3:657506-657525 | Msa1087890:CDS | 45.0% |
| ! | TATTGCTGCTGATGGTTCTG+TGG | + | chr7_3:657514-657533 | Msa1087890:CDS | 45.0% |
| AATGCCTAGGATAGACAGTG+AGG | + | chr7_3:657866-657885 | Msa1087890:CDS | 45.0% | |
| ATGCCTAGGATAGACAGTGA+GGG | + | chr7_3:657867-657886 | Msa1087890:CDS | 45.0% | |
| !! | ACAGTGAGGGTGTTATGTGT+GGG | + | chr7_3:657880-657899 | Msa1087890:CDS | 45.0% |
| AATCAAATGATGCCACGCGT+CGG | + | chr7_3:657933-657952 | Msa1087890:CDS | 45.0% | |
| TGAAGCTAACTGGGCTACTT+GGG | + | chr7_3:657959-657978 | Msa1087890:CDS | 45.0% | |
| ! | GGGTTTGTTTGAAGGGGAAT+AGG | - | chr7_3:656663-656682 | None:intergenic | 45.0% |
| AGATTAGACCTGCAAACCGT+AGG | + | chr7_3:656932-656951 | Msa1087890:intron | 45.0% | |
| ! | TCTTTTCTCCTACGGTTTGC+AGG | - | chr7_3:656943-656962 | None:intergenic | 45.0% |
| ! | CAGTATGGACTATCAAAGGG+AGG | + | chr7_3:657223-657242 | Msa1087890:CDS | 45.0% |
| ATATCGGACACTTCGTGACA+GGG | + | chr7_3:657273-657292 | Msa1087890:CDS | 45.0% | |
| ! | CTTTGAGGACTTGATCAGCA+GGG | - | chr7_3:657306-657325 | None:intergenic | 45.0% |
| ! | TCTTTGAGGACTTGATCAGC+AGG | - | chr7_3:657307-657326 | None:intergenic | 45.0% |
| ! | TAGGGTTCTGATGGCCATAT+TGG | + | chr7_3:657479-657498 | Msa1087890:intron | 45.0% |
| GGCCATATTGGACTCTATTG+GGG | + | chr7_3:657491-657510 | Msa1087890:CDS | 45.0% | |
| !! | TATTGGGGTATTGCTGCTGA+TGG | + | chr7_3:657506-657525 | Msa1087890:CDS | 45.0% |
| ! | TATTGCTGCTGATGGTTCTG+TGG | + | chr7_3:657514-657533 | Msa1087890:CDS | 45.0% |
| AATGCCTAGGATAGACAGTG+AGG | + | chr7_3:657866-657885 | Msa1087890:CDS | 45.0% | |
| ATGCCTAGGATAGACAGTGA+GGG | + | chr7_3:657867-657886 | Msa1087890:CDS | 45.0% | |
| !! | ACAGTGAGGGTGTTATGTGT+GGG | + | chr7_3:657880-657899 | Msa1087890:CDS | 45.0% |
| AATCAAATGATGCCACGCGT+CGG | + | chr7_3:657933-657952 | Msa1087890:CDS | 45.0% | |
| TGAAGCTAACTGGGCTACTT+GGG | + | chr7_3:657959-657978 | Msa1087890:CDS | 45.0% | |
| !! | AAAAAAAAAAAAAAACTAAA+TGG | - | chr7_3:656740-656759 | None:intergenic | 5.0% |
| !! | ATTATATTTCAAATAATATT+AGG | + | chr7_3:656972-656991 | Msa1087890:intron | 5.0% |
| !! | AAAAAAAAAAAAAAACTAAA+TGG | - | chr7_3:656740-656759 | None:intergenic | 5.0% |
| !! | ATTATATTTCAAATAATATT+AGG | + | chr7_3:656972-656991 | Msa1087890:intron | 5.0% |
| GCTGGACTGTTAAGCTCCTT+TGG | - | chr7_3:656530-656549 | None:intergenic | 50.0% | |
| ACTATCAAAGGGAGGCAACG+AGG | + | chr7_3:657231-657250 | Msa1087890:CDS | 50.0% | |
| CATATCGGACACTTCGTGAC+AGG | + | chr7_3:657272-657291 | Msa1087890:CDS | 50.0% | |
| TATCGGACACTTCGTGACAG+GGG | + | chr7_3:657274-657293 | Msa1087890:CDS | 50.0% | |
| AGGACTTGATCAGCAGGGTA+TGG | - | chr7_3:657301-657320 | None:intergenic | 50.0% | |
| ACACCCTCACTGTCTATCCT+AGG | - | chr7_3:657873-657892 | None:intergenic | 50.0% | |
| !! | GACAGTGAGGGTGTTATGTG+TGG | + | chr7_3:657879-657898 | Msa1087890:CDS | 50.0% |
| !! | CAGTGAGGGTGTTATGTGTG+GGG | + | chr7_3:657881-657900 | Msa1087890:CDS | 50.0% |
| CGTCGGAAGTGAAGCTAACT+GGG | + | chr7_3:657950-657969 | Msa1087890:CDS | 50.0% | |
| GTGAAGCTAACTGGGCTACT+TGG | + | chr7_3:657958-657977 | Msa1087890:CDS | 50.0% | |
| GAAGCTAACTGGGCTACTTG+GGG | + | chr7_3:657960-657979 | Msa1087890:CDS | 50.0% | |
| GCTGGACTGTTAAGCTCCTT+TGG | - | chr7_3:656530-656549 | None:intergenic | 50.0% | |
| ACTATCAAAGGGAGGCAACG+AGG | + | chr7_3:657231-657250 | Msa1087890:CDS | 50.0% | |
| CATATCGGACACTTCGTGAC+AGG | + | chr7_3:657272-657291 | Msa1087890:CDS | 50.0% | |
| TATCGGACACTTCGTGACAG+GGG | + | chr7_3:657274-657293 | Msa1087890:CDS | 50.0% | |
| AGGACTTGATCAGCAGGGTA+TGG | - | chr7_3:657301-657320 | None:intergenic | 50.0% | |
| ACACCCTCACTGTCTATCCT+AGG | - | chr7_3:657873-657892 | None:intergenic | 50.0% | |
| !! | GACAGTGAGGGTGTTATGTG+TGG | + | chr7_3:657879-657898 | Msa1087890:CDS | 50.0% |
| !! | CAGTGAGGGTGTTATGTGTG+GGG | + | chr7_3:657881-657900 | Msa1087890:CDS | 50.0% |
| CGTCGGAAGTGAAGCTAACT+GGG | + | chr7_3:657950-657969 | Msa1087890:CDS | 50.0% | |
| GTGAAGCTAACTGGGCTACT+TGG | + | chr7_3:657958-657977 | Msa1087890:CDS | 50.0% | |
| GAAGCTAACTGGGCTACTTG+GGG | + | chr7_3:657960-657979 | Msa1087890:CDS | 50.0% | |
| TTAGCTTCACTTCCGACGCG+TGG | - | chr7_3:657948-657967 | None:intergenic | 55.0% | |
| GCGTCGGAAGTGAAGCTAAC+TGG | + | chr7_3:657949-657968 | Msa1087890:CDS | 55.0% | |
| TTAGCTTCACTTCCGACGCG+TGG | - | chr7_3:657948-657967 | None:intergenic | 55.0% | |
| GCGTCGGAAGTGAAGCTAAC+TGG | + | chr7_3:657949-657968 | Msa1087890:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 656314 | 658185 | 656314 | ID=Msa1087890;Name=Msa1087890 |
| chr7_3 | mRNA | 656314 | 658185 | 656314 | ID=Msa1087890-mRNA-1;Parent=Msa1087890;Name=Msa1087890-mRNA-1;_AED=0.03;_eAED=0.03;_QI=86|1|1|1|0.75|0.6|5|196|251 |
| chr7_3 | exon | 656314 | 656344 | 656314 | ID=Msa1087890-mRNA-1:exon:282;Parent=Msa1087890-mRNA-1 |
| chr7_3 | exon | 656436 | 656696 | 656436 | ID=Msa1087890-mRNA-1:exon:283;Parent=Msa1087890-mRNA-1 |
| chr7_3 | exon | 657150 | 657390 | 657150 | ID=Msa1087890-mRNA-1:exon:284;Parent=Msa1087890-mRNA-1 |
| chr7_3 | exon | 657482 | 657602 | 657482 | ID=Msa1087890-mRNA-1:exon:285;Parent=Msa1087890-mRNA-1 |
| chr7_3 | exon | 657802 | 658185 | 657802 | ID=Msa1087890-mRNA-1:exon:286;Parent=Msa1087890-mRNA-1 |
| chr7_3 | five_prime_UTR | 656314 | 656344 | 656314 | ID=Msa1087890-mRNA-1:five_prime_utr;Parent=Msa1087890-mRNA-1 |
| chr7_3 | five_prime_UTR | 656436 | 656490 | 656436 | ID=Msa1087890-mRNA-1:five_prime_utr;Parent=Msa1087890-mRNA-1 |
| chr7_3 | CDS | 656491 | 656696 | 656491 | ID=Msa1087890-mRNA-1:cds;Parent=Msa1087890-mRNA-1 |
| chr7_3 | CDS | 657150 | 657390 | 657150 | ID=Msa1087890-mRNA-1:cds;Parent=Msa1087890-mRNA-1 |
| chr7_3 | CDS | 657482 | 657602 | 657482 | ID=Msa1087890-mRNA-1:cds;Parent=Msa1087890-mRNA-1 |
| chr7_3 | CDS | 657802 | 657989 | 657802 | ID=Msa1087890-mRNA-1:cds;Parent=Msa1087890-mRNA-1 |
| chr7_3 | three_prime_UTR | 657990 | 658185 | 657990 | ID=Msa1087890-mRNA-1:three_prime_utr;Parent=Msa1087890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
