Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385970 | XP_003593529.1 | 99.602 | 251 | 1 | 0 | 1 | 251 | 1 | 251 | 0.0 | 523 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385970 | sp|P24805|TSJT1_TOBAC | 41.611 | 149 | 85 | 2 | 1 | 148 | 1 | 148 | 1.50e-34 | 124 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385970 | G7IP18 | 99.602 | 251 | 1 | 0 | 1 | 251 | 1 | 251 | 0.0 | 523 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011920 | Msa1385970 | -0.804806 | 1.810447e-49 | -8.615850e-47 |
| Msa0037180 | Msa1385970 | 0.819919 | 9.018390e-53 | -8.615850e-47 |
| Msa0046950 | Msa1385970 | 0.908205 | 2.203642e-81 | -8.615850e-47 |
| Msa0053640 | Msa1385970 | 0.896173 | 4.757413e-76 | -8.615850e-47 |
| Msa0067590 | Msa1385970 | -0.807199 | 5.681215e-50 | -8.615850e-47 |
| Msa0076640 | Msa1385970 | 0.815111 | 1.092729e-51 | -8.615850e-47 |
| Msa0081610 | Msa1385970 | -0.801453 | 8.940840e-49 | -8.615850e-47 |
| Msa0092220 | Msa1385970 | 0.817257 | 3.622706e-52 | -8.615850e-47 |
| Msa0097570 | Msa1385970 | 0.801078 | 1.066742e-48 | -8.615850e-47 |
| Msa0099260 | Msa1385970 | 0.877947 | 4.174554e-69 | -8.615850e-47 |
| Msa1363280 | Msa1385970 | -0.857015 | 2.176071e-62 | -8.615850e-47 |
| Msa1363310 | Msa1385970 | -0.803421 | 3.513634e-49 | -8.615850e-47 |
| Msa1385970 | Msa1386580 | -0.803463 | 3.444633e-49 | -8.615850e-47 |
| Msa1385970 | Msa1417110 | 0.998594 | 6.934245e-270 | -8.615850e-47 |
| Msa1385970 | Msa1441330 | 0.849281 | 3.576670e-60 | -8.615850e-47 |
| Msa1385970 | Msa1443220 | 0.844220 | 8.650138e-59 | -8.615850e-47 |
| Msa1385970 | Msa1453430 | 0.826175 | 3.133863e-54 | -8.615850e-47 |
| Msa0626920 | Msa1385970 | 0.809476 | 1.857047e-50 | -8.615850e-47 |
| Msa0651870 | Msa1385970 | 0.809345 | 1.981460e-50 | -8.615850e-47 |
| Msa0651890 | Msa1385970 | 0.806644 | 7.440990e-50 | -8.615850e-47 |
| Msa0683200 | Msa1385970 | -0.830771 | 2.434744e-55 | -8.615850e-47 |
| Msa0689300 | Msa1385970 | 0.818544 | 1.854263e-52 | -8.615850e-47 |
| Msa0706110 | Msa1385970 | 0.804699 | 1.906078e-49 | -8.615850e-47 |
| Msa0758830 | Msa1385970 | 0.810617 | 1.054611e-50 | -8.615850e-47 |
| Msa0801320 | Msa1385970 | -0.801935 | 7.120852e-49 | -8.615850e-47 |
| Msa0832760 | Msa1385970 | 0.840062 | 1.090432e-57 | -8.615850e-47 |
| Msa0838640 | Msa1385970 | 0.824141 | 9.480249e-54 | -8.615850e-47 |
| Msa0838650 | Msa1385970 | 0.836689 | 8.078016e-57 | -8.615850e-47 |
| Msa0127910 | Msa1385970 | -0.801374 | 9.281797e-49 | -8.615850e-47 |
| Msa0145430 | Msa1385970 | 0.810697 | 1.013259e-50 | -8.615850e-47 |
| Msa0148040 | Msa1385970 | 0.886946 | 2.196467e-72 | -8.615850e-47 |
| Msa0173950 | Msa1385970 | -0.807157 | 5.797538e-50 | -8.615850e-47 |
| Msa0177320 | Msa1385970 | 0.810728 | 9.979999e-51 | -8.615850e-47 |
| Msa0186400 | Msa1385970 | -0.816439 | 5.525871e-52 | -8.615850e-47 |
| Msa0233920 | Msa1385970 | 0.992382 | 5.939397e-193 | -8.615850e-47 |
| Msa1249600 | Msa1385970 | 0.801202 | 1.006224e-48 | -8.615850e-47 |
| Msa1265020 | Msa1385970 | 0.821315 | 4.310791e-53 | -8.615850e-47 |
| Msa1312770 | Msa1385970 | 0.814267 | 1.680357e-51 | -8.615850e-47 |
| Msa1337850 | Msa1385970 | 0.838332 | 3.062037e-57 | -8.615850e-47 |
| Msa0390590 | Msa1385970 | -0.802356 | 5.832765e-49 | -8.615850e-47 |
| Msa0403750 | Msa1385970 | 0.854416 | 1.248716e-61 | -8.615850e-47 |
| Msa0403790 | Msa1385970 | 0.823802 | 1.138613e-53 | -8.615850e-47 |
| Msa0403860 | Msa1385970 | 0.846378 | 2.255904e-59 | -8.615850e-47 |
| Msa0460760 | Msa1385970 | 0.823282 | 1.506217e-53 | -8.615850e-47 |
| Msa0464850 | Msa1385970 | 0.831518 | 1.594939e-55 | -8.615850e-47 |
| Msa0481310 | Msa1385970 | 0.809589 | 1.755735e-50 | -8.615850e-47 |
| Msa0982550 | Msa1385970 | 0.845184 | 4.758146e-59 | -8.615850e-47 |
| Msa1038350 | Msa1385970 | 0.804536 | 2.060666e-49 | -8.615850e-47 |
| Msa1087890 | Msa1385970 | 0.994919 | 2.270825e-211 | -8.615850e-47 |
| Msa0294200 | Msa1385970 | 0.819467 | 1.143909e-52 | -8.615850e-47 |
| Msa0307380 | Msa1385970 | 0.800296 | 1.540467e-48 | -8.615850e-47 |
| Msa0312640 | Msa1385970 | 0.951596 | 1.461900e-109 | -8.615850e-47 |
| Msa1129420 | Msa1385970 | 0.915151 | 8.270786e-85 | -8.615850e-47 |
| Msa1221960 | Msa1385970 | 0.824595 | 7.414655e-54 | -8.615850e-47 |
| Msa0484400 | Msa1385970 | 0.847604 | 1.040773e-59 | -8.615850e-47 |
| Msa0502900 | Msa1385970 | -0.800268 | 1.560950e-48 | -8.615850e-47 |
| Msa0510520 | Msa1385970 | 0.814579 | 1.433797e-51 | -8.615850e-47 |
| Msa0523420 | Msa1385970 | -0.826100 | 3.264018e-54 | -8.615850e-47 |
| Msa0526490 | Msa1385970 | -0.801602 | 8.335179e-49 | -8.615850e-47 |
| Msa0526500 | Msa1385970 | -0.852088 | 5.805693e-61 | -8.615850e-47 |
| Msa0526520 | Msa1385970 | -0.800733 | 1.255113e-48 | -8.615850e-47 |
| Msa0548160 | Msa1385970 | -0.829944 | 3.876008e-55 | -8.615850e-47 |
| Msa0563440 | Msa1385970 | 0.837496 | 5.022830e-57 | -8.615850e-47 |
| Msa0577730 | Msa1385970 | 0.814914 | 1.208606e-51 | -8.615850e-47 |
| Msa0969380 | Msa1385970 | 0.841941 | 3.501079e-58 | -8.615850e-47 |
| Msa0969590 | Msa1385970 | 0.835671 | 1.465222e-56 | -8.615850e-47 |
| Msa0969720 | Msa1385970 | 0.837474 | 5.089508e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385970 | MtrunA17_Chr2g0281901 | 99.602 | 251 | 1 | 0 | 1 | 251 | 1 | 251 | 0.0 | 523 |
| Msa1385970 | MtrunA17_Chr4g0047531 | 74.704 | 253 | 62 | 2 | 1 | 251 | 64 | 316 | 3.06e-136 | 386 |
| Msa1385970 | MtrunA17_Chr2g0317901 | 66.800 | 250 | 82 | 1 | 1 | 249 | 1 | 250 | 3.55e-113 | 325 |
| Msa1385970 | MtrunA17_Chr1g0166351 | 46.000 | 250 | 131 | 3 | 1 | 248 | 1 | 248 | 1.99e-81 | 244 |
| Msa1385970 | MtrunA17_Chr1g0204611 | 42.972 | 249 | 138 | 2 | 1 | 247 | 1 | 247 | 6.08e-78 | 235 |
| Msa1385970 | MtrunA17_Chr2g0287871 | 40.870 | 230 | 132 | 3 | 1 | 229 | 1 | 227 | 2.52e-58 | 185 |
| Msa1385970 | MtrunA17_Chr4g0065571 | 38.261 | 230 | 139 | 2 | 1 | 229 | 1 | 228 | 1.05e-57 | 183 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385970 | AT4G27450.1 | 65.060 | 249 | 85 | 2 | 1 | 247 | 1 | 249 | 3.31e-117 | 335 |
| Msa1385970 | AT3G15450.1 | 61.847 | 249 | 92 | 3 | 1 | 247 | 1 | 248 | 3.99e-109 | 315 |
| Msa1385970 | AT5G43830.1 | 45.783 | 249 | 132 | 2 | 1 | 247 | 1 | 248 | 8.93e-81 | 243 |
| Msa1385970 | AT3G15450.2 | 59.896 | 192 | 74 | 3 | 1 | 190 | 1 | 191 | 3.09e-76 | 230 |
| Msa1385970 | AT3G22850.1 | 41.700 | 247 | 142 | 1 | 1 | 247 | 1 | 245 | 9.15e-73 | 223 |
| Msa1385970 | AT3G15450.3 | 59.649 | 171 | 66 | 3 | 1 | 169 | 1 | 170 | 5.06e-64 | 198 |
| Msa1385970 | AT5G19140.1 | 42.174 | 230 | 129 | 3 | 1 | 229 | 1 | 227 | 2.46e-60 | 190 |
| Msa1385970 | AT5G19140.2 | 39.056 | 233 | 126 | 4 | 1 | 232 | 1 | 218 | 6.19e-52 | 169 |
| Msa1385970 | AT5G19140.3 | 45.833 | 168 | 88 | 2 | 66 | 232 | 29 | 194 | 1.57e-50 | 164 |
Find 75 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGGTTATTTCTGAAAATT+TGG | 0.186131 | tig0020780:+17415 | Msa1385970:CDS |
| GAGCAACTTATTAGTCCTTT+TGG | 0.192738 | tig0020780:+17930 | Msa1385970:three_prime_UTR |
| AGGCATTGCTTTCATCTTCT+TGG | 0.213186 | tig0020780:-17733 | None:intergenic |
| CAACATATACTGTGCTTTCA+TGG | 0.289891 | tig0020780:+17051 | Msa1385970:CDS |
| CTGAGAATCAACATTGAAAT+TGG | 0.290530 | tig0020780:-17787 | None:intergenic |
| TAGGGTTCTGATGGCCATAT+TGG | 0.309694 | tig0020780:+17362 | Msa1385970:intron |
| GCGTCGGAAGTGAAGCTAAC+TGG | 0.331100 | tig0020780:+17832 | Msa1385970:CDS |
| GGGTTTGTTTGAAGGGGAAT+AGG | 0.347155 | tig0020780:-16541 | None:intergenic |
| TGGCCATATTGGACTCTATT+GGG | 0.347166 | tig0020780:+17373 | Msa1385970:CDS |
| CAAGAAATGGAGATTGAAAA+TGG | 0.365031 | tig0020780:-16200 | None:intergenic |
| AACTGCCTTCAAGTTCTTTG+AGG | 0.369411 | tig0020780:-17201 | None:intergenic |
| GTGAAGCTAACTGGGCTACT+TGG | 0.380329 | tig0020780:+17841 | Msa1385970:CDS |
| AAACTTCGTGTTATTCATAT+CGG | 0.383357 | tig0020780:-18029 | None:intergenic |
| ACACAGGTTGTTTAGTGGTT+TGG | 0.384227 | tig0020780:+17027 | Msa1385970:intron |
| GCTGGACTGTTAAGCTCCTT+TGG | 0.386416 | tig0020780:-16408 | None:intergenic |
| ATGGCCATATTGGACTCTAT+TGG | 0.399544 | tig0020780:+17372 | Msa1385970:CDS |
| GGTCATGTAAAATGCATTAG+AGG | 0.401764 | tig0020780:-16496 | None:intergenic |
| AAAATGAACATGCCAAGAAA+TGG | 0.410585 | tig0020780:-16213 | None:intergenic |
| TATAGCATACCTTTGATGAA+TGG | 0.418351 | tig0020780:-16565 | None:intergenic |
| AGAAGACACTGAAATTGATT+AGG | 0.428037 | tig0020780:-18060 | None:intergenic |
| TTGGATGCTCAAAGTTCAAC+AGG | 0.429617 | tig0020780:-17710 | None:intergenic |
| TGAAGCTAACTGGGCTACTT+GGG | 0.434720 | tig0020780:+17842 | Msa1385970:CDS |
| AGTCAATTAAACAAGCAGTA+TGG | 0.435366 | tig0020780:+17091 | Msa1385970:CDS |
| TTGTCACACAGGTTGTTTAG+TGG | 0.439422 | tig0020780:+17022 | Msa1385970:intron |
| GATCTAGAAGAGAACATGTT+GGG | 0.455955 | tig0020780:+16357 | Msa1385970:exon |
| TACCCCAATAGAGTCCAATA+TGG | 0.456193 | tig0020780:-17376 | None:intergenic |
| ATTGCTTTCATCTTCTTGGT+TGG | 0.456752 | tig0020780:-17729 | None:intergenic |
| AGGACTTGATCAGCAGGGTA+TGG | 0.462918 | tig0020780:-17181 | None:intergenic |
| ATATACATACCAGTTGGAAA+TGG | 0.462995 | tig0020780:-17473 | None:intergenic |
| TCATTTGCACCATTTCCAAC+TGG | 0.471531 | tig0020780:+17464 | Msa1385970:CDS |
| ATTTGTGATCTATGATCATA+AGG | 0.473807 | tig0020780:+17228 | Msa1385970:CDS |
| TCTCTAAGAATTTCATGACT+TGG | 0.475577 | tig0020780:-16456 | None:intergenic |
| CAAGTCCTCAAAGAACTTGA+AGG | 0.477517 | tig0020780:+17196 | Msa1385970:CDS |
| TGTTTATCATCGAAGCATAT+CGG | 0.480407 | tig0020780:+17140 | Msa1385970:CDS |
| TGAATGGAGGGTTTGTTTGA+AGG | 0.484201 | tig0020780:-16549 | None:intergenic |
| CATATCGGACACTTCGTGAC+AGG | 0.489174 | tig0020780:+17155 | Msa1385970:CDS |
| CAAGCAGTATGGACTATCAA+AGG | 0.492197 | tig0020780:+17102 | Msa1385970:CDS |
| AAGGACTAATAAGTTGCTCT+TGG | 0.494089 | tig0020780:-17926 | None:intergenic |
| GTGTTTGATTAGGGTTCTGA+TGG | 0.494123 | tig0020780:+17353 | Msa1385970:intron |
| GAATGGAGGGTTTGTTTGAA+GGG | 0.511713 | tig0020780:-16548 | None:intergenic |
| CGTCGGAAGTGAAGCTAACT+GGG | 0.514379 | tig0020780:+17833 | Msa1385970:CDS |
| TGTTTGTTTCATAGTGAGCA+TGG | 0.516434 | tig0020780:+17687 | Msa1385970:CDS |
| AACATATACTGTGCTTTCAT+GGG | 0.516602 | tig0020780:+17052 | Msa1385970:CDS |
| AGCTTCTAATTCACACACTA+AGG | 0.518797 | tig0020780:+16428 | Msa1385970:CDS |
| TCTTTGAGGACTTGATCAGC+AGG | 0.520998 | tig0020780:-17187 | None:intergenic |
| TTAATTGACTAAGATTATGC+AGG | 0.523474 | tig0020780:-17078 | None:intergenic |
| AGCATACCTTTGATGAATGG+AGG | 0.526703 | tig0020780:-16562 | None:intergenic |
| GCATACCTTTGATGAATGGA+GGG | 0.530944 | tig0020780:-16561 | None:intergenic |
| GTGATCTATGATCATAAGGA+TGG | 0.533318 | tig0020780:+17232 | Msa1385970:CDS |
| TATTGCTGCTGATGGTTCTG+TGG | 0.539065 | tig0020780:+17397 | Msa1385970:CDS |
| ACACCCTCACTGTCTATCCT+AGG | 0.539998 | tig0020780:-17753 | None:intergenic |
| TATTGGGGTATTGCTGCTGA+TGG | 0.541579 | tig0020780:+17389 | Msa1385970:CDS |
| AATGGAGGGTTTGTTTGAAG+GGG | 0.545512 | tig0020780:-16547 | None:intergenic |
| TTAGTGTGTGAATTAGAAGC+TGG | 0.552483 | tig0020780:-16426 | None:intergenic |
| AGAAGATGAAAGCAATGCCT+AGG | 0.563928 | tig0020780:+17736 | Msa1385970:CDS |
| AAGCAGTATGGACTATCAAA+GGG | 0.565561 | tig0020780:+17103 | Msa1385970:CDS |
| TGATCTAGAAGAGAACATGT+TGG | 0.582611 | tig0020780:+16356 | Msa1385970:exon |
| GACAGTGAGGGTGTTATGTG+TGG | 0.584626 | tig0020780:+17762 | Msa1385970:CDS |
| ACAAACCCTCCATTCATCAA+AGG | 0.600022 | tig0020780:+16556 | Msa1385970:CDS |
| TTAGCTTCACTTCCGACGCG+TGG | 0.602591 | tig0020780:-17828 | None:intergenic |
| AAAGTTGGTTAATGCACCAA+AGG | 0.604581 | tig0020780:+16392 | Msa1385970:CDS |
| TCAATGTTGATTCTCAGTCG+AGG | 0.609359 | tig0020780:+17793 | Msa1385970:CDS |
| AATCAAATGATGCCACGCGT+CGG | 0.614420 | tig0020780:+17816 | Msa1385970:CDS |
| ATATCGGACACTTCGTGACA+GGG | 0.614896 | tig0020780:+17156 | Msa1385970:CDS |
| CTTTGAGGACTTGATCAGCA+GGG | 0.622312 | tig0020780:-17186 | None:intergenic |
| TAATAAAGCATCATTTCCAA+AGG | 0.630341 | tig0020780:-16517 | None:intergenic |
| GAAGCTAACTGGGCTACTTG+GGG | 0.631415 | tig0020780:+17843 | Msa1385970:CDS |
| GGCCATATTGGACTCTATTG+GGG | 0.633432 | tig0020780:+17374 | Msa1385970:CDS |
| ACAGTGAGGGTGTTATGTGT+GGG | 0.635934 | tig0020780:+17763 | Msa1385970:CDS |
| ATGCCTAGGATAGACAGTGA+GGG | 0.675197 | tig0020780:+17750 | Msa1385970:CDS |
| CAGTATGGACTATCAAAGGG+AGG | 0.687799 | tig0020780:+17106 | Msa1385970:CDS |
| CAGTGAGGGTGTTATGTGTG+GGG | 0.693979 | tig0020780:+17764 | Msa1385970:CDS |
| TATCGGACACTTCGTGACAG+GGG | 0.696194 | tig0020780:+17157 | Msa1385970:CDS |
| AATGCCTAGGATAGACAGTG+AGG | 0.696652 | tig0020780:+17749 | Msa1385970:CDS |
| ACTATCAAAGGGAGGCAACG+AGG | 0.706158 | tig0020780:+17114 | Msa1385970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAAAAAAAAAACTAAA+TGG | - | tig0020780:16621-16640 | None:intergenic | 10.0% |
| !! | AGAAAAAAAAAAAAACTAAA+TGG | - | tig0020780:16621-16640 | None:intergenic | 10.0% |
| !!! | ATCATTAGTTTATAATTAGA+AGG | - | tig0020780:16595-16614 | None:intergenic | 15.0% |
| !!! | TATATAATTTTAGCTTCTAT+AGG | + | tig0020780:16747-16766 | Msa1385970:intron | 15.0% |
| !! | TCAATTAATTAGTCAAAAAA+AGG | - | tig0020780:17322-17341 | None:intergenic | 15.0% |
| !!! | ATCATTAGTTTATAATTAGA+AGG | - | tig0020780:16595-16614 | None:intergenic | 15.0% |
| !!! | TATATAATTTTAGCTTCTAT+AGG | + | tig0020780:16747-16766 | Msa1385970:intron | 15.0% |
| !! | TCAATTAATTAGTCAAAAAA+AGG | - | tig0020780:17322-17341 | None:intergenic | 15.0% |
| !! | AATTATGTTTGTGTTTGATT+AGG | + | tig0020780:17343-17362 | Msa1385970:intron | 20.0% |
| !! | ATTATGTTTGTGTTTGATTA+GGG | + | tig0020780:17344-17363 | Msa1385970:intron | 20.0% |
| !! | AATAACCATTTAGATCAAAT+TGG | + | tig0020780:17590-17609 | Msa1385970:intron | 20.0% |
| !! | TTAAATGTTGTTGAAATTTC+AGG | + | tig0020780:17663-17682 | Msa1385970:intron | 20.0% |
| !! | TAAATGTTGTTGAAATTTCA+GGG | + | tig0020780:17664-17683 | Msa1385970:intron | 20.0% |
| !! | AATTATGTTTGTGTTTGATT+AGG | + | tig0020780:17343-17362 | Msa1385970:intron | 20.0% |
| !! | ATTATGTTTGTGTTTGATTA+GGG | + | tig0020780:17344-17363 | Msa1385970:intron | 20.0% |
| !! | AATAACCATTTAGATCAAAT+TGG | + | tig0020780:17590-17609 | Msa1385970:intron | 20.0% |
| !! | TTAAATGTTGTTGAAATTTC+AGG | + | tig0020780:17663-17682 | Msa1385970:intron | 20.0% |
| !! | TAAATGTTGTTGAAATTTCA+GGG | + | tig0020780:17664-17683 | Msa1385970:intron | 20.0% |
| !! | TAATAAAGCATCATTTCCAA+AGG | - | tig0020780:16520-16539 | None:intergenic | 25.0% |
| ! | CTAATCTTAGACATAAACTT+AGG | - | tig0020780:16802-16821 | None:intergenic | 25.0% |
| ! | ATAATATTAGGTCAAACTAC+TGG | + | tig0020780:16867-16886 | Msa1385970:intron | 25.0% |
| ! | CTAGATCTAGGTAAATAAAA+AGG | + | tig0020780:16941-16960 | Msa1385970:intron | 25.0% |
| ! | TTAATTGACTAAGATTATGC+AGG | - | tig0020780:17081-17100 | None:intergenic | 25.0% |
| ! | ATTTGTGATCTATGATCATA+AGG | + | tig0020780:17228-17247 | Msa1385970:CDS | 25.0% |
| !!! | TAATTTTTTCCAACGTTTAG+AGG | - | tig0020780:17298-17317 | None:intergenic | 25.0% |
| !!! | TGTGGTTATTTCTGAAAATT+TGG | + | tig0020780:17415-17434 | Msa1385970:CDS | 25.0% |
| ! | TCATTTATGATCTTTCCATA+GGG | - | tig0020780:17529-17548 | None:intergenic | 25.0% |
| ! | ATCATTTATGATCTTTCCAT+AGG | - | tig0020780:17530-17549 | None:intergenic | 25.0% |
| ! | CAAAAACTAAATATCCCAAA+AGG | - | tig0020780:17948-17967 | None:intergenic | 25.0% |
| !!! | GATATTTAGTTTTTGTCGTT+TGG | + | tig0020780:17953-17972 | Msa1385970:three_prime_UTR | 25.0% |
| !! | AAACTTCGTGTTATTCATAT+CGG | - | tig0020780:18032-18051 | None:intergenic | 25.0% |
| !! | TAATAAAGCATCATTTCCAA+AGG | - | tig0020780:16520-16539 | None:intergenic | 25.0% |
| ! | CTAATCTTAGACATAAACTT+AGG | - | tig0020780:16802-16821 | None:intergenic | 25.0% |
| ! | ATAATATTAGGTCAAACTAC+TGG | + | tig0020780:16867-16886 | Msa1385970:intron | 25.0% |
| ! | CTAGATCTAGGTAAATAAAA+AGG | + | tig0020780:16941-16960 | Msa1385970:intron | 25.0% |
| ! | TTAATTGACTAAGATTATGC+AGG | - | tig0020780:17081-17100 | None:intergenic | 25.0% |
| ! | ATTTGTGATCTATGATCATA+AGG | + | tig0020780:17228-17247 | Msa1385970:CDS | 25.0% |
| !!! | TAATTTTTTCCAACGTTTAG+AGG | - | tig0020780:17298-17317 | None:intergenic | 25.0% |
| !!! | TGTGGTTATTTCTGAAAATT+TGG | + | tig0020780:17415-17434 | Msa1385970:CDS | 25.0% |
| ! | TCATTTATGATCTTTCCATA+GGG | - | tig0020780:17529-17548 | None:intergenic | 25.0% |
| ! | ATCATTTATGATCTTTCCAT+AGG | - | tig0020780:17530-17549 | None:intergenic | 25.0% |
| ! | CAAAAACTAAATATCCCAAA+AGG | - | tig0020780:17948-17967 | None:intergenic | 25.0% |
| !!! | GATATTTAGTTTTTGTCGTT+TGG | + | tig0020780:17953-17972 | Msa1385970:three_prime_UTR | 25.0% |
| !! | AAACTTCGTGTTATTCATAT+CGG | - | tig0020780:18032-18051 | None:intergenic | 25.0% |
| CAAGAAATGGAGATTGAAAA+TGG | - | tig0020780:16203-16222 | None:intergenic | 30.0% | |
| ! | CATTTTCAATCTCCATTTCT+TGG | + | tig0020780:16201-16220 | Msa1385970:five_prime_UTR | 30.0% |
| AAAATGAACATGCCAAGAAA+TGG | - | tig0020780:16216-16235 | None:intergenic | 30.0% | |
| ! | TCTCTAAGAATTTCATGACT+TGG | - | tig0020780:16459-16478 | None:intergenic | 30.0% |
| ! | AATGCATTTTACATGACCTT+TGG | + | tig0020780:16501-16520 | Msa1385970:CDS | 30.0% |
| TATAGCATACCTTTGATGAA+TGG | - | tig0020780:16568-16587 | None:intergenic | 30.0% | |
| ! | GCATATAATCTTTTCTCCTA+CGG | - | tig0020780:16834-16853 | None:intergenic | 30.0% |
| ! | TATTTACCTAGATCTAGTTC+AGG | - | tig0020780:16938-16957 | None:intergenic | 30.0% |
| AACATATACTGTGCTTTCAT+GGG | + | tig0020780:17052-17071 | Msa1385970:CDS | 30.0% | |
| AGTCAATTAAACAAGCAGTA+TGG | + | tig0020780:17091-17110 | Msa1385970:CDS | 30.0% | |
| TGTTTATCATCGAAGCATAT+CGG | + | tig0020780:17140-17159 | Msa1385970:CDS | 30.0% | |
| ATATACATACCAGTTGGAAA+TGG | - | tig0020780:17476-17495 | None:intergenic | 30.0% | |
| TTCCAACTGGTATGTATATT+TGG | + | tig0020780:17477-17496 | Msa1385970:intron | 30.0% | |
| AACCAAATATACATACCAGT+TGG | - | tig0020780:17482-17501 | None:intergenic | 30.0% | |
| !! | ATGAGTTTTTAACTACCCTA+TGG | + | tig0020780:17511-17530 | Msa1385970:intron | 30.0% |
| GTATGCCAATTTGATCTAAA+TGG | - | tig0020780:17598-17617 | None:intergenic | 30.0% | |
| ATAATGTGCGAAATTGTCTA+TGG | + | tig0020780:17622-17641 | Msa1385970:intron | 30.0% | |
| TAATGTGCGAAATTGTCTAT+GGG | + | tig0020780:17623-17642 | Msa1385970:intron | 30.0% | |
| CTGAGAATCAACATTGAAAT+TGG | - | tig0020780:17790-17809 | None:intergenic | 30.0% | |
| ! | AGCAACTTATTAGTCCTTTT+GGG | + | tig0020780:17931-17950 | Msa1385970:three_prime_UTR | 30.0% |
| CAAGAAATGGAGATTGAAAA+TGG | - | tig0020780:16203-16222 | None:intergenic | 30.0% | |
| ! | CATTTTCAATCTCCATTTCT+TGG | + | tig0020780:16201-16220 | Msa1385970:five_prime_UTR | 30.0% |
| AAAATGAACATGCCAAGAAA+TGG | - | tig0020780:16216-16235 | None:intergenic | 30.0% | |
| ! | TCTCTAAGAATTTCATGACT+TGG | - | tig0020780:16459-16478 | None:intergenic | 30.0% |
| ! | AATGCATTTTACATGACCTT+TGG | + | tig0020780:16501-16520 | Msa1385970:CDS | 30.0% |
| TATAGCATACCTTTGATGAA+TGG | - | tig0020780:16568-16587 | None:intergenic | 30.0% | |
| ! | GCATATAATCTTTTCTCCTA+CGG | - | tig0020780:16834-16853 | None:intergenic | 30.0% |
| ! | TATTTACCTAGATCTAGTTC+AGG | - | tig0020780:16938-16957 | None:intergenic | 30.0% |
| AACATATACTGTGCTTTCAT+GGG | + | tig0020780:17052-17071 | Msa1385970:CDS | 30.0% | |
| AGTCAATTAAACAAGCAGTA+TGG | + | tig0020780:17091-17110 | Msa1385970:CDS | 30.0% | |
| TGTTTATCATCGAAGCATAT+CGG | + | tig0020780:17140-17159 | Msa1385970:CDS | 30.0% | |
| ATATACATACCAGTTGGAAA+TGG | - | tig0020780:17476-17495 | None:intergenic | 30.0% | |
| TTCCAACTGGTATGTATATT+TGG | + | tig0020780:17477-17496 | Msa1385970:intron | 30.0% | |
| AACCAAATATACATACCAGT+TGG | - | tig0020780:17482-17501 | None:intergenic | 30.0% | |
| !! | ATGAGTTTTTAACTACCCTA+TGG | + | tig0020780:17511-17530 | Msa1385970:intron | 30.0% |
| GTATGCCAATTTGATCTAAA+TGG | - | tig0020780:17598-17617 | None:intergenic | 30.0% | |
| ATAATGTGCGAAATTGTCTA+TGG | + | tig0020780:17622-17641 | Msa1385970:intron | 30.0% | |
| TAATGTGCGAAATTGTCTAT+GGG | + | tig0020780:17623-17642 | Msa1385970:intron | 30.0% | |
| CTGAGAATCAACATTGAAAT+TGG | - | tig0020780:17790-17809 | None:intergenic | 30.0% | |
| ! | AGCAACTTATTAGTCCTTTT+GGG | + | tig0020780:17931-17950 | Msa1385970:three_prime_UTR | 30.0% |
| TGATCTAGAAGAGAACATGT+TGG | + | tig0020780:16356-16375 | Msa1385970:exon | 35.0% | |
| GATCTAGAAGAGAACATGTT+GGG | + | tig0020780:16357-16376 | Msa1385970:exon | 35.0% | |
| ! | GAACATGTTGGGAATTTTCA+AGG | + | tig0020780:16368-16387 | Msa1385970:exon | 35.0% |
| !! | GGGAATTTTCAAGGAAAAGT+TGG | + | tig0020780:16377-16396 | Msa1385970:CDS | 35.0% |
| ! | AAAGTTGGTTAATGCACCAA+AGG | + | tig0020780:16392-16411 | Msa1385970:CDS | 35.0% |
| TTAGTGTGTGAATTAGAAGC+TGG | - | tig0020780:16429-16448 | None:intergenic | 35.0% | |
| AGCTTCTAATTCACACACTA+AGG | + | tig0020780:16428-16447 | Msa1385970:CDS | 35.0% | |
| GGTCATGTAAAATGCATTAG+AGG | - | tig0020780:16499-16518 | None:intergenic | 35.0% | |
| TAGGTTTCAGATCTGATTGT+AGG | + | tig0020780:16766-16785 | Msa1385970:intron | 35.0% | |
| AAATGACCTGAACTAGATCT+AGG | + | tig0020780:16929-16948 | Msa1385970:intron | 35.0% | |
| !! | AAATGTGTCATTTGTCACAC+AGG | + | tig0020780:17011-17030 | Msa1385970:intron | 35.0% |
| CAACATATACTGTGCTTTCA+TGG | + | tig0020780:17051-17070 | Msa1385970:CDS | 35.0% | |
| ! | AAGCAGTATGGACTATCAAA+GGG | + | tig0020780:17103-17122 | Msa1385970:CDS | 35.0% |
| GTGATCTATGATCATAAGGA+TGG | + | tig0020780:17232-17251 | Msa1385970:CDS | 35.0% | |
| ! | CTTAATTAGCCTCTAAACGT+TGG | + | tig0020780:17286-17305 | Msa1385970:intron | 35.0% |
| TGTTTGTTTCATAGTGAGCA+TGG | + | tig0020780:17687-17706 | Msa1385970:CDS | 35.0% | |
| ATTGCTTTCATCTTCTTGGT+TGG | - | tig0020780:17732-17751 | None:intergenic | 35.0% | |
| AAGGACTAATAAGTTGCTCT+TGG | - | tig0020780:17929-17948 | None:intergenic | 35.0% | |
| ! | GAGCAACTTATTAGTCCTTT+TGG | + | tig0020780:17930-17949 | Msa1385970:three_prime_UTR | 35.0% |
| TGATCTAGAAGAGAACATGT+TGG | + | tig0020780:16356-16375 | Msa1385970:exon | 35.0% | |
| GATCTAGAAGAGAACATGTT+GGG | + | tig0020780:16357-16376 | Msa1385970:exon | 35.0% | |
| ! | GAACATGTTGGGAATTTTCA+AGG | + | tig0020780:16368-16387 | Msa1385970:exon | 35.0% |
| !! | GGGAATTTTCAAGGAAAAGT+TGG | + | tig0020780:16377-16396 | Msa1385970:CDS | 35.0% |
| ! | AAAGTTGGTTAATGCACCAA+AGG | + | tig0020780:16392-16411 | Msa1385970:CDS | 35.0% |
| TTAGTGTGTGAATTAGAAGC+TGG | - | tig0020780:16429-16448 | None:intergenic | 35.0% | |
| AGCTTCTAATTCACACACTA+AGG | + | tig0020780:16428-16447 | Msa1385970:CDS | 35.0% | |
| GGTCATGTAAAATGCATTAG+AGG | - | tig0020780:16499-16518 | None:intergenic | 35.0% | |
| TAGGTTTCAGATCTGATTGT+AGG | + | tig0020780:16766-16785 | Msa1385970:intron | 35.0% | |
| AAATGACCTGAACTAGATCT+AGG | + | tig0020780:16929-16948 | Msa1385970:intron | 35.0% | |
| !! | AAATGTGTCATTTGTCACAC+AGG | + | tig0020780:17011-17030 | Msa1385970:intron | 35.0% |
| CAACATATACTGTGCTTTCA+TGG | + | tig0020780:17051-17070 | Msa1385970:CDS | 35.0% | |
| ! | AAGCAGTATGGACTATCAAA+GGG | + | tig0020780:17103-17122 | Msa1385970:CDS | 35.0% |
| GTGATCTATGATCATAAGGA+TGG | + | tig0020780:17232-17251 | Msa1385970:CDS | 35.0% | |
| ! | CTTAATTAGCCTCTAAACGT+TGG | + | tig0020780:17286-17305 | Msa1385970:intron | 35.0% |
| TGTTTGTTTCATAGTGAGCA+TGG | + | tig0020780:17687-17706 | Msa1385970:CDS | 35.0% | |
| ATTGCTTTCATCTTCTTGGT+TGG | - | tig0020780:17732-17751 | None:intergenic | 35.0% | |
| AAGGACTAATAAGTTGCTCT+TGG | - | tig0020780:17929-17948 | None:intergenic | 35.0% | |
| ! | GAGCAACTTATTAGTCCTTT+TGG | + | tig0020780:17930-17949 | Msa1385970:three_prime_UTR | 35.0% |
| ! | AATGGAGGGTTTGTTTGAAG+GGG | - | tig0020780:16550-16569 | None:intergenic | 40.0% |
| ! | GAATGGAGGGTTTGTTTGAA+GGG | - | tig0020780:16551-16570 | None:intergenic | 40.0% |
| ! | TGAATGGAGGGTTTGTTTGA+AGG | - | tig0020780:16552-16571 | None:intergenic | 40.0% |
| ACAAACCCTCCATTCATCAA+AGG | + | tig0020780:16556-16575 | Msa1385970:CDS | 40.0% | |
| GCATACCTTTGATGAATGGA+GGG | - | tig0020780:16564-16583 | None:intergenic | 40.0% | |
| AGCATACCTTTGATGAATGG+AGG | - | tig0020780:16565-16584 | None:intergenic | 40.0% | |
| TTGTCACACAGGTTGTTTAG+TGG | + | tig0020780:17022-17041 | Msa1385970:intron | 40.0% | |
| ACACAGGTTGTTTAGTGGTT+TGG | + | tig0020780:17027-17046 | Msa1385970:intron | 40.0% | |
| ! | CAAGCAGTATGGACTATCAA+AGG | + | tig0020780:17102-17121 | Msa1385970:CDS | 40.0% |
| CAAGTCCTCAAAGAACTTGA+AGG | + | tig0020780:17196-17215 | Msa1385970:CDS | 40.0% | |
| ! | AACTGCCTTCAAGTTCTTTG+AGG | - | tig0020780:17204-17223 | None:intergenic | 40.0% |
| ! | GTGTTTGATTAGGGTTCTGA+TGG | + | tig0020780:17353-17372 | Msa1385970:intron | 40.0% |
| ATGGCCATATTGGACTCTAT+TGG | + | tig0020780:17372-17391 | Msa1385970:CDS | 40.0% | |
| TGGCCATATTGGACTCTATT+GGG | + | tig0020780:17373-17392 | Msa1385970:CDS | 40.0% | |
| TACCCCAATAGAGTCCAATA+TGG | - | tig0020780:17379-17398 | None:intergenic | 40.0% | |
| TCATTTGCACCATTTCCAAC+TGG | + | tig0020780:17464-17483 | Msa1385970:CDS | 40.0% | |
| TTGGATGCTCAAAGTTCAAC+AGG | - | tig0020780:17713-17732 | None:intergenic | 40.0% | |
| ! | AGGCATTGCTTTCATCTTCT+TGG | - | tig0020780:17736-17755 | None:intergenic | 40.0% |
| AGAAGATGAAAGCAATGCCT+AGG | + | tig0020780:17736-17755 | Msa1385970:CDS | 40.0% | |
| !! | TCAATGTTGATTCTCAGTCG+AGG | + | tig0020780:17793-17812 | Msa1385970:CDS | 40.0% |
| ! | AATGGAGGGTTTGTTTGAAG+GGG | - | tig0020780:16550-16569 | None:intergenic | 40.0% |
| ! | GAATGGAGGGTTTGTTTGAA+GGG | - | tig0020780:16551-16570 | None:intergenic | 40.0% |
| ! | TGAATGGAGGGTTTGTTTGA+AGG | - | tig0020780:16552-16571 | None:intergenic | 40.0% |
| ACAAACCCTCCATTCATCAA+AGG | + | tig0020780:16556-16575 | Msa1385970:CDS | 40.0% | |
| GCATACCTTTGATGAATGGA+GGG | - | tig0020780:16564-16583 | None:intergenic | 40.0% | |
| AGCATACCTTTGATGAATGG+AGG | - | tig0020780:16565-16584 | None:intergenic | 40.0% | |
| TTGTCACACAGGTTGTTTAG+TGG | + | tig0020780:17022-17041 | Msa1385970:intron | 40.0% | |
| ACACAGGTTGTTTAGTGGTT+TGG | + | tig0020780:17027-17046 | Msa1385970:intron | 40.0% | |
| ! | CAAGCAGTATGGACTATCAA+AGG | + | tig0020780:17102-17121 | Msa1385970:CDS | 40.0% |
| CAAGTCCTCAAAGAACTTGA+AGG | + | tig0020780:17196-17215 | Msa1385970:CDS | 40.0% | |
| ! | AACTGCCTTCAAGTTCTTTG+AGG | - | tig0020780:17204-17223 | None:intergenic | 40.0% |
| ! | GTGTTTGATTAGGGTTCTGA+TGG | + | tig0020780:17353-17372 | Msa1385970:intron | 40.0% |
| ATGGCCATATTGGACTCTAT+TGG | + | tig0020780:17372-17391 | Msa1385970:CDS | 40.0% | |
| TGGCCATATTGGACTCTATT+GGG | + | tig0020780:17373-17392 | Msa1385970:CDS | 40.0% | |
| TACCCCAATAGAGTCCAATA+TGG | - | tig0020780:17379-17398 | None:intergenic | 40.0% | |
| TCATTTGCACCATTTCCAAC+TGG | + | tig0020780:17464-17483 | Msa1385970:CDS | 40.0% | |
| TTGGATGCTCAAAGTTCAAC+AGG | - | tig0020780:17713-17732 | None:intergenic | 40.0% | |
| ! | AGGCATTGCTTTCATCTTCT+TGG | - | tig0020780:17736-17755 | None:intergenic | 40.0% |
| AGAAGATGAAAGCAATGCCT+AGG | + | tig0020780:17736-17755 | Msa1385970:CDS | 40.0% | |
| !! | TCAATGTTGATTCTCAGTCG+AGG | + | tig0020780:17793-17812 | Msa1385970:CDS | 40.0% |
| ! | GGGTTTGTTTGAAGGGGAAT+AGG | - | tig0020780:16544-16563 | None:intergenic | 45.0% |
| AGATTAGACCTGCAAACCGT+AGG | + | tig0020780:16815-16834 | Msa1385970:intron | 45.0% | |
| ! | TCTTTTCTCCTACGGTTTGC+AGG | - | tig0020780:16826-16845 | None:intergenic | 45.0% |
| ! | CAGTATGGACTATCAAAGGG+AGG | + | tig0020780:17106-17125 | Msa1385970:CDS | 45.0% |
| ATATCGGACACTTCGTGACA+GGG | + | tig0020780:17156-17175 | Msa1385970:CDS | 45.0% | |
| ! | CTTTGAGGACTTGATCAGCA+GGG | - | tig0020780:17189-17208 | None:intergenic | 45.0% |
| ! | TCTTTGAGGACTTGATCAGC+AGG | - | tig0020780:17190-17209 | None:intergenic | 45.0% |
| ! | TAGGGTTCTGATGGCCATAT+TGG | + | tig0020780:17362-17381 | Msa1385970:intron | 45.0% |
| GGCCATATTGGACTCTATTG+GGG | + | tig0020780:17374-17393 | Msa1385970:CDS | 45.0% | |
| !! | TATTGGGGTATTGCTGCTGA+TGG | + | tig0020780:17389-17408 | Msa1385970:CDS | 45.0% |
| ! | TATTGCTGCTGATGGTTCTG+TGG | + | tig0020780:17397-17416 | Msa1385970:CDS | 45.0% |
| AATGCCTAGGATAGACAGTG+AGG | + | tig0020780:17749-17768 | Msa1385970:CDS | 45.0% | |
| ATGCCTAGGATAGACAGTGA+GGG | + | tig0020780:17750-17769 | Msa1385970:CDS | 45.0% | |
| !! | ACAGTGAGGGTGTTATGTGT+GGG | + | tig0020780:17763-17782 | Msa1385970:CDS | 45.0% |
| AATCAAATGATGCCACGCGT+CGG | + | tig0020780:17816-17835 | Msa1385970:CDS | 45.0% | |
| TGAAGCTAACTGGGCTACTT+GGG | + | tig0020780:17842-17861 | Msa1385970:CDS | 45.0% | |
| ! | GGGTTTGTTTGAAGGGGAAT+AGG | - | tig0020780:16544-16563 | None:intergenic | 45.0% |
| AGATTAGACCTGCAAACCGT+AGG | + | tig0020780:16815-16834 | Msa1385970:intron | 45.0% | |
| ! | TCTTTTCTCCTACGGTTTGC+AGG | - | tig0020780:16826-16845 | None:intergenic | 45.0% |
| ! | CAGTATGGACTATCAAAGGG+AGG | + | tig0020780:17106-17125 | Msa1385970:CDS | 45.0% |
| ATATCGGACACTTCGTGACA+GGG | + | tig0020780:17156-17175 | Msa1385970:CDS | 45.0% | |
| ! | CTTTGAGGACTTGATCAGCA+GGG | - | tig0020780:17189-17208 | None:intergenic | 45.0% |
| ! | TCTTTGAGGACTTGATCAGC+AGG | - | tig0020780:17190-17209 | None:intergenic | 45.0% |
| ! | TAGGGTTCTGATGGCCATAT+TGG | + | tig0020780:17362-17381 | Msa1385970:intron | 45.0% |
| GGCCATATTGGACTCTATTG+GGG | + | tig0020780:17374-17393 | Msa1385970:CDS | 45.0% | |
| !! | TATTGGGGTATTGCTGCTGA+TGG | + | tig0020780:17389-17408 | Msa1385970:CDS | 45.0% |
| ! | TATTGCTGCTGATGGTTCTG+TGG | + | tig0020780:17397-17416 | Msa1385970:CDS | 45.0% |
| AATGCCTAGGATAGACAGTG+AGG | + | tig0020780:17749-17768 | Msa1385970:CDS | 45.0% | |
| ATGCCTAGGATAGACAGTGA+GGG | + | tig0020780:17750-17769 | Msa1385970:CDS | 45.0% | |
| !! | ACAGTGAGGGTGTTATGTGT+GGG | + | tig0020780:17763-17782 | Msa1385970:CDS | 45.0% |
| AATCAAATGATGCCACGCGT+CGG | + | tig0020780:17816-17835 | Msa1385970:CDS | 45.0% | |
| TGAAGCTAACTGGGCTACTT+GGG | + | tig0020780:17842-17861 | Msa1385970:CDS | 45.0% | |
| !! | ATTATATTTCAAATAATATT+AGG | + | tig0020780:16855-16874 | Msa1385970:intron | 5.0% |
| !! | ATTATATTTCAAATAATATT+AGG | + | tig0020780:16855-16874 | Msa1385970:intron | 5.0% |
| GCTGGACTGTTAAGCTCCTT+TGG | - | tig0020780:16411-16430 | None:intergenic | 50.0% | |
| ACTATCAAAGGGAGGCAACG+AGG | + | tig0020780:17114-17133 | Msa1385970:CDS | 50.0% | |
| CATATCGGACACTTCGTGAC+AGG | + | tig0020780:17155-17174 | Msa1385970:CDS | 50.0% | |
| TATCGGACACTTCGTGACAG+GGG | + | tig0020780:17157-17176 | Msa1385970:CDS | 50.0% | |
| AGGACTTGATCAGCAGGGTA+TGG | - | tig0020780:17184-17203 | None:intergenic | 50.0% | |
| ACACCCTCACTGTCTATCCT+AGG | - | tig0020780:17756-17775 | None:intergenic | 50.0% | |
| !! | GACAGTGAGGGTGTTATGTG+TGG | + | tig0020780:17762-17781 | Msa1385970:CDS | 50.0% |
| !! | CAGTGAGGGTGTTATGTGTG+GGG | + | tig0020780:17764-17783 | Msa1385970:CDS | 50.0% |
| CGTCGGAAGTGAAGCTAACT+GGG | + | tig0020780:17833-17852 | Msa1385970:CDS | 50.0% | |
| GTGAAGCTAACTGGGCTACT+TGG | + | tig0020780:17841-17860 | Msa1385970:CDS | 50.0% | |
| GAAGCTAACTGGGCTACTTG+GGG | + | tig0020780:17843-17862 | Msa1385970:CDS | 50.0% | |
| GCTGGACTGTTAAGCTCCTT+TGG | - | tig0020780:16411-16430 | None:intergenic | 50.0% | |
| ACTATCAAAGGGAGGCAACG+AGG | + | tig0020780:17114-17133 | Msa1385970:CDS | 50.0% | |
| CATATCGGACACTTCGTGAC+AGG | + | tig0020780:17155-17174 | Msa1385970:CDS | 50.0% | |
| TATCGGACACTTCGTGACAG+GGG | + | tig0020780:17157-17176 | Msa1385970:CDS | 50.0% | |
| AGGACTTGATCAGCAGGGTA+TGG | - | tig0020780:17184-17203 | None:intergenic | 50.0% | |
| ACACCCTCACTGTCTATCCT+AGG | - | tig0020780:17756-17775 | None:intergenic | 50.0% | |
| !! | GACAGTGAGGGTGTTATGTG+TGG | + | tig0020780:17762-17781 | Msa1385970:CDS | 50.0% |
| !! | CAGTGAGGGTGTTATGTGTG+GGG | + | tig0020780:17764-17783 | Msa1385970:CDS | 50.0% |
| CGTCGGAAGTGAAGCTAACT+GGG | + | tig0020780:17833-17852 | Msa1385970:CDS | 50.0% | |
| GTGAAGCTAACTGGGCTACT+TGG | + | tig0020780:17841-17860 | Msa1385970:CDS | 50.0% | |
| GAAGCTAACTGGGCTACTTG+GGG | + | tig0020780:17843-17862 | Msa1385970:CDS | 50.0% | |
| TTAGCTTCACTTCCGACGCG+TGG | - | tig0020780:17831-17850 | None:intergenic | 55.0% | |
| GCGTCGGAAGTGAAGCTAAC+TGG | + | tig0020780:17832-17851 | Msa1385970:CDS | 55.0% | |
| TTAGCTTCACTTCCGACGCG+TGG | - | tig0020780:17831-17850 | None:intergenic | 55.0% | |
| GCGTCGGAAGTGAAGCTAAC+TGG | + | tig0020780:17832-17851 | Msa1385970:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020780 | gene | 16192 | 18068 | 16192 | ID=Msa1385970;Name=Msa1385970 |
| tig0020780 | mRNA | 16192 | 18068 | 16192 | ID=Msa1385970-mRNA-1;Parent=Msa1385970;Name=Msa1385970-mRNA-1;_AED=0.03;_eAED=0.03;_QI=86|1|1|1|0.75|0.6|5|196|251 |
| tig0020780 | exon | 16192 | 16222 | 16192 | ID=Msa1385970-mRNA-1:exon:9890;Parent=Msa1385970-mRNA-1 |
| tig0020780 | exon | 16317 | 16577 | 16317 | ID=Msa1385970-mRNA-1:exon:9891;Parent=Msa1385970-mRNA-1 |
| tig0020780 | exon | 17033 | 17273 | 17033 | ID=Msa1385970-mRNA-1:exon:9892;Parent=Msa1385970-mRNA-1 |
| tig0020780 | exon | 17365 | 17485 | 17365 | ID=Msa1385970-mRNA-1:exon:9893;Parent=Msa1385970-mRNA-1 |
| tig0020780 | exon | 17685 | 18068 | 17685 | ID=Msa1385970-mRNA-1:exon:9894;Parent=Msa1385970-mRNA-1 |
| tig0020780 | five_prime_UTR | 16192 | 16222 | 16192 | ID=Msa1385970-mRNA-1:five_prime_utr;Parent=Msa1385970-mRNA-1 |
| tig0020780 | five_prime_UTR | 16317 | 16371 | 16317 | ID=Msa1385970-mRNA-1:five_prime_utr;Parent=Msa1385970-mRNA-1 |
| tig0020780 | CDS | 16372 | 16577 | 16372 | ID=Msa1385970-mRNA-1:cds;Parent=Msa1385970-mRNA-1 |
| tig0020780 | CDS | 17033 | 17273 | 17033 | ID=Msa1385970-mRNA-1:cds;Parent=Msa1385970-mRNA-1 |
| tig0020780 | CDS | 17365 | 17485 | 17365 | ID=Msa1385970-mRNA-1:cds;Parent=Msa1385970-mRNA-1 |
| tig0020780 | CDS | 17685 | 17872 | 17685 | ID=Msa1385970-mRNA-1:cds;Parent=Msa1385970-mRNA-1 |
| tig0020780 | three_prime_UTR | 17873 | 18068 | 17873 | ID=Msa1385970-mRNA-1:three_prime_utr;Parent=Msa1385970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
