AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1163320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1163320 MtrunA17_Chr7g0260091 96.774 248 8 0 1 248 93 340 0.0 500
Msa1163320 MtrunA17_Chr1g0205081 67.227 238 77 1 1 238 87 323 1.45e-110 321
Msa1163320 MtrunA17_Chr5g0423571 54.583 240 101 2 1 240 94 325 1.66e-86 260
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1163320 AT3G63250.2 71.074 242 67 1 1 242 54 292 4.40e-131 372
Msa1163320 AT3G63250.3 71.074 242 67 1 1 242 94 332 4.72e-131 374
Msa1163320 AT3G63250.1 71.074 242 67 1 1 242 94 332 4.72e-131 374
Msa1163320 AT3G22740.1 62.551 243 90 1 1 243 98 339 1.12e-111 325
Msa1163320 AT3G25900.1 54.008 237 101 1 1 237 95 323 2.31e-88 265
Msa1163320 AT3G25900.3 48.945 237 93 2 1 237 95 303 4.73e-74 228
Msa1163320 AT3G25900.2 55.814 172 68 1 1 172 95 258 4.02e-61 193

Find 84 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTGAGCTTCAATCTTATT+TGG 0.122068 7_4:+54511965 None:intergenic
GAGCTAGGGGCTTGCCTTGT+AGG 0.202680 7_4:-54508575 Msa1163320:CDS
TATTGATGTGCGTGTTAAAA+AGG 0.232793 7_4:+54508317 None:intergenic
TTGTCTCATATGTTAGTAAA+TGG 0.239454 7_4:-54508601 Msa1163320:CDS
TGGGAGTTATGGAGCTTATT+TGG 0.245465 7_4:-54512533 Msa1163320:CDS
GCCTAGCTGCACTAATAAAA+TGG 0.315269 7_4:-54508351 Msa1163320:three_prime_UTR
AAAATTTATCAACACTCATT+TGG 0.316475 7_4:+54508229 None:intergenic
TGTTGTTAGTGGTGATTCTA+TGG 0.337820 7_4:-54511419 Msa1163320:CDS
CGATGTGCTGCGTGTTCTTC+GGG 0.359204 7_4:-54512613 Msa1163320:CDS
GCAGCGTCAGTTGGGAGTTA+TGG 0.361850 7_4:-54512544 Msa1163320:CDS
TTTGCCTCCTTTCTGAATAC+AGG 0.364114 7_4:+54508460 None:intergenic
AGATATTCCAAATGCTTGAT+TGG 0.371090 7_4:-54508191 Msa1163320:three_prime_UTR
TCATAAGTTTCCCCGCTGTT+TGG 0.372686 7_4:+54510745 None:intergenic
ACGACTCCTGTTACCATTAG+AGG 0.376264 7_4:-54508539 Msa1163320:CDS
GTTCCTGGCAGTGGGAATTA+TGG 0.377036 7_4:-54512085 Msa1163320:intron
ACGATGTGCTGCGTGTTCTT+CGG 0.380986 7_4:-54512614 Msa1163320:CDS
ACAGTAACCAATCAAGCATT+TGG 0.388476 7_4:+54508184 None:intergenic
TATATCCCTCTAATGGTAAC+AGG 0.396778 7_4:+54508533 None:intergenic
GCACATTACATTGAACTAGA+AGG 0.407321 7_4:-54508108 Msa1163320:three_prime_UTR
CTGTTTGGATATATAGCAAT+TGG 0.408490 7_4:+54510760 None:intergenic
TCCAAATAAGATTGAAGCTC+AGG 0.412834 7_4:-54511966 Msa1163320:intron
TCGGAGAAGAGTTCAAGTTT+TGG 0.416563 7_4:-54512026 Msa1163320:CDS
ACTGACGCTGCAATCAAGAT+AGG 0.419566 7_4:+54512556 None:intergenic
TTCTCGTTGCAGCAAAATAC+AGG 0.419771 7_4:-54508641 Msa1163320:intron
ATCTTGATTGCAGCGTCAGT+TGG 0.420474 7_4:-54512553 Msa1163320:CDS
CAGAACACTTCTTCAGCCTC+AGG 0.426530 7_4:+54512756 None:intergenic
GAGCAATTTCAACACTTCTT+CGG 0.428515 7_4:+54512662 None:intergenic
ATAAGACCATGTATAAATCT+AGG 0.432041 7_4:+54511331 None:intergenic
GTGGCAACATGACCCATTGC+AGG 0.436518 7_4:+54508402 None:intergenic
CTGAGATGTGAAGATTAATA+TGG 0.450698 7_4:-54508373 Msa1163320:three_prime_UTR
GTTAGTAAATGGTGTGAGCT+AGG 0.451251 7_4:-54508590 Msa1163320:CDS
GATTGAAAATAAAATGAAAA+CGG 0.459903 7_4:+54508074 None:intergenic
GTGCACAAACTGAGATTCTC+AGG 0.464860 7_4:+54508127 None:intergenic
TTAGTAAATGGTGTGAGCTA+GGG 0.468877 7_4:-54508589 Msa1163320:CDS
TATGGAGCTTATTTGGCTGA+TGG 0.469206 7_4:-54512526 Msa1163320:CDS
TGTGCATAGGCCACCATTCA+AGG 0.472559 7_4:-54512730 Msa1163320:five_prime_UTR
TGTGTTGTATATCCCTCTAA+TGG 0.479138 7_4:+54508526 None:intergenic
CTTATAACATAATTTACCCT+TGG 0.490016 7_4:-54508159 Msa1163320:three_prime_UTR
TCAATAGATTGAAAGAGAAC+GGG 0.494274 7_4:-54508300 Msa1163320:three_prime_UTR
GATGGAATTAATGTTGTTAG+TGG 0.495050 7_4:-54511430 Msa1163320:CDS
TCTTGACATATAAATTAGAC+TGG 0.497323 7_4:+54508428 None:intergenic
TTGCTATATATCCAAACAGC+GGG 0.500837 7_4:-54510756 Msa1163320:CDS
ATCAATAGATTGAAAGAGAA+CGG 0.509432 7_4:-54508301 Msa1163320:three_prime_UTR
TCTTGATTGCAGCGTCAGTT+GGG 0.513565 7_4:-54512552 Msa1163320:CDS
ATGTCAAGAATGCCTGCAAT+GGG 0.516349 7_4:-54508414 Msa1163320:three_prime_UTR
TCTGGAAGAAGAGAACATAA+AGG 0.517244 7_4:-54511482 Msa1163320:CDS
TCAAGATAGGGCGTTTCTTG+AGG 0.521679 7_4:+54512569 None:intergenic
TATGTCAAGAATGCCTGCAA+TGG 0.528967 7_4:-54508415 Msa1163320:three_prime_UTR
TTCCTTAAAACCTTGAATGG+TGG 0.544296 7_4:+54512720 None:intergenic
GACCATGTATAAATCTAGGT+GGG 0.549212 7_4:+54511335 None:intergenic
CTAGGGGCTTGCCTTGTAGG+TGG 0.551943 7_4:-54508572 Msa1163320:CDS
TTGCCTCCTTTCTGAATACA+GGG 0.555094 7_4:+54508461 None:intergenic
TTCTCAGGTCACTAGCTCCA+AGG 0.555329 7_4:+54508142 None:intergenic
GAATTAAAACAAAACCATGC+TGG 0.555699 7_4:+54511457 None:intergenic
TTTGTTACATGATTCAGCAA+TGG 0.559832 7_4:+54511384 None:intergenic
TGGCTGATGGATCAGAGTAC+AGG 0.561820 7_4:-54512513 Msa1163320:intron
GAATTGTTTCAAATGCAAGC+AGG 0.562216 7_4:+54511987 None:intergenic
TTCTACAGCATCCACCTACA+AGG 0.565665 7_4:+54508561 None:intergenic
CTGACGCTGCAATCAAGATA+GGG 0.584854 7_4:+54512557 None:intergenic
TCTCAGGTCACTAGCTCCAA+GGG 0.591010 7_4:+54508143 None:intergenic
AACTTATGATGGTGAACGAA+AGG 0.591774 7_4:-54510731 Msa1163320:CDS
TGTAACAAAGTCATTGCTGT+CGG 0.592477 7_4:-54511370 Msa1163320:CDS
CGACTCCTGTTACCATTAGA+GGG 0.594314 7_4:-54508538 Msa1163320:CDS
AAGTGTTGAAATTGCTCGTG+AGG 0.595677 7_4:-54512656 Msa1163320:CDS
TAGTAAATGGTGTGAGCTAG+GGG 0.598250 7_4:-54508588 Msa1163320:CDS
TGTGTTACTAATAAAACCTG+AGG 0.612850 7_4:-54512772 Msa1163320:five_prime_UTR
AACAGCGGGGAAACTTATGA+TGG 0.615065 7_4:-54510742 Msa1163320:CDS
TGATTGCCCTGTATTCAGAA+AGG 0.618784 7_4:-54508467 Msa1163320:three_prime_UTR
AAGTGTTCTGTGATGTGCAT+AGG 0.621923 7_4:-54512743 Msa1163320:five_prime_UTR
TGTTAGTGGTGATTCTATGG+TGG 0.623910 7_4:-54511416 Msa1163320:CDS
CTTCACATCTCAGCACAAAG+TGG 0.635310 7_4:+54508383 None:intergenic
AGACCATGTATAAATCTAGG+TGG 0.636497 7_4:+54511334 None:intergenic
ACCATGTATAAATCTAGGTG+GGG 0.639621 7_4:+54511336 None:intergenic
GGTGATTCTATGGTGGAATG+TGG 0.643745 7_4:-54511409 Msa1163320:CDS
AGAACATAAAGGTTCCAGCA+TGG 0.648815 7_4:-54511471 Msa1163320:CDS
ATTCAGAAAGGAGGCAAATG+CGG 0.653795 7_4:-54508455 Msa1163320:three_prime_UTR
TAGCTGCACTAATAAAATGG+CGG 0.656450 7_4:-54508348 Msa1163320:three_prime_UTR
TGGTGAACGAAAGGAGTGGA+TGG 0.656564 7_4:-54510722 Msa1163320:intron
ACCCCACCTAGATTTATACA+TGG 0.658597 7_4:-54511337 Msa1163320:CDS
TTGCCCTGTATTCAGAAAGG+AGG 0.680522 7_4:-54508464 Msa1163320:three_prime_UTR
AATACAGGGCAATCACTGTG+TGG 0.706106 7_4:+54508475 None:intergenic
TGCTATATATCCAAACAGCG+GGG 0.726008 7_4:-54510755 Msa1163320:CDS
ATTGCTATATATCCAAACAG+CGG 0.758463 7_4:-54510757 Msa1163320:CDS
ATGATGGTGAACGAAAGGAG+TGG 0.791661 7_4:-54510726 Msa1163320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATAAATAAACAGATT+CGG + chr7_4:54508388-54508407 None:intergenic 10.0%
!!! TTATATTGTTTTTAAATGAT+AGG - chr7_4:54510180-54510199 Msa1163320:intron 10.0%
!! TAGTTATTAGAAATTAAAAA+TGG - chr7_4:54510978-54510997 Msa1163320:intron 10.0%
!! TACAATAATTATATATTGAA+AGG + chr7_4:54511016-54511035 None:intergenic 10.0%
!!! TCATTTTCTTAAATTATTAT+CGG + chr7_4:54511566-54511585 None:intergenic 10.0%
!!! ATTTTATTTTCAATCAATTT+TGG - chr7_4:54512780-54512799 Msa1163320:five_prime_UTR 10.0%
!! TTTGATTGTTAATCAATAAA+TGG + chr7_4:54508464-54508483 None:intergenic 15.0%
!! ACAAATAAAAATATGATAGA+GGG + chr7_4:54508943-54508962 None:intergenic 15.0%
!! AACAAATAAAAATATGATAG+AGG + chr7_4:54508944-54508963 None:intergenic 15.0%
!! GAAATCATATATTATTTGAA+TGG - chr7_4:54509735-54509754 Msa1163320:intron 15.0%
!! ATATTATTCAATGAATCTAT+AGG + chr7_4:54509796-54509815 None:intergenic 15.0%
!!! ATAGTTTTTGTTAATTAAGA+TGG - chr7_4:54509837-54509856 Msa1163320:intron 15.0%
!!! TTTTAATTTCTAATAACTAC+TGG + chr7_4:54510977-54510996 None:intergenic 15.0%
!!! TTTGTGTATACTTTTAAATT+GGG - chr7_4:54511110-54511129 Msa1163320:intron 15.0%
!! ATGATTTCTTAATATTTCTT+GGG + chr7_4:54511324-54511343 None:intergenic 15.0%
!! AATGATTTCTTAATATTTCT+TGG + chr7_4:54511325-54511344 None:intergenic 15.0%
!!! TAGTGTTACTATTATTATAT+TGG - chr7_4:54511907-54511926 Msa1163320:intron 15.0%
!!! TTGTGATTTACAATTTTATA+TGG - chr7_4:54512024-54512043 Msa1163320:CDS 15.0%
!! GATTGAAAATAAAATGAAAA+CGG + chr7_4:54512775-54512794 None:intergenic 15.0%
!! TTAAAAGATAGACAAAATGT+GGG + chr7_4:54509163-54509182 None:intergenic 20.0%
!!! ACTTCAATTTTTTGAATGTA+CGG + chr7_4:54509293-54509312 None:intergenic 20.0%
!!! ATGGTTTTGTTTTAATTCTA+AGG - chr7_4:54509394-54509413 Msa1163320:intron 20.0%
!!! TTTTGTTTTAATTCTAAGGA+TGG - chr7_4:54509398-54509417 Msa1163320:intron 20.0%
!!! TGTCTTTTAAAATATTGACA+AGG - chr7_4:54509932-54509951 Msa1163320:intron 20.0%
!! AACAAATTATATGTGTATCA+GGG + chr7_4:54510051-54510070 None:intergenic 20.0%
!!! TTCTTTTATTTAACAGCATA+CGG + chr7_4:54510343-54510362 None:intergenic 20.0%
!!! CTTTGTGTATACTTTTAAAT+TGG - chr7_4:54511109-54511128 Msa1163320:intron 20.0%
!!! ATTTCTTATTTTACCTCATT+CGG - chr7_4:54511146-54511165 Msa1163320:intron 20.0%
!! TGCAGAAATTGTATTATTAA+TGG - chr7_4:54511262-54511281 Msa1163320:intron 20.0%
!!! CAACATAATTCTATATTTTC+CGG - chr7_4:54511761-54511780 Msa1163320:intron 20.0%
!! AAAATTTATCAACACTCATT+TGG + chr7_4:54512620-54512639 None:intergenic 20.0%
!! TTTTTCCTTAAAACCTTGAA+TGG + chr7_4:54508132-54508151 None:intergenic 25.0%
!!! ATTCAAGGTTTTAAGGAAAA+AGG - chr7_4:54508131-54508150 Msa1163320:three_prime_UTR 25.0%
!! AAAGGATTTTCTAATGAAGA+AGG - chr7_4:54508149-54508168 Msa1163320:three_prime_UTR 25.0%
!! TATGATATGTTTCTTTTCCA+AGG - chr7_4:54508491-54508510 Msa1163320:CDS 25.0%
!! AAACTCTCAAAGATTTTCAT+CGG - chr7_4:54508801-54508820 Msa1163320:intron 25.0%
! ACAAAATGTGGGTAAAAAAA+GGG + chr7_4:54509152-54509171 None:intergenic 25.0%
! CTTAAAAGATAGACAAAATG+TGG + chr7_4:54509164-54509183 None:intergenic 25.0%
! TTAAGACATAGACAAATTGT+GGG + chr7_4:54509206-54509225 None:intergenic 25.0%
! TTAAGAGATACACAAATTGT+GGG + chr7_4:54509249-54509268 None:intergenic 25.0%
! ATTAAGAGATACACAAATTG+TGG + chr7_4:54509250-54509269 None:intergenic 25.0%
! ATAAGACCATGTATAAATCT+AGG + chr7_4:54509518-54509537 None:intergenic 25.0%
!! TCTTATACTTTTGCTTAAGA+AGG - chr7_4:54509532-54509551 Msa1163320:intron 25.0%
! TAAAATTCCAAAAGAGTAAG+AGG + chr7_4:54509651-54509670 None:intergenic 25.0%
! ATAATATATGATTTCCAACG+AGG + chr7_4:54509730-54509749 None:intergenic 25.0%
! TGAATGGATAAAAACAATTG+TGG - chr7_4:54509751-54509770 Msa1163320:intron 25.0%
! ACTTAAGATATACACTCATT+CGG - chr7_4:54509887-54509906 Msa1163320:intron 25.0%
! GAACAAATTATATGTGTATC+AGG + chr7_4:54510052-54510071 None:intergenic 25.0%
!!! GATACACATATAATTTGTTC+AGG - chr7_4:54510052-54510071 Msa1163320:intron 25.0%
! AAATTTGAACCAATATGCAT+TGG - chr7_4:54510275-54510294 Msa1163320:intron 25.0%
! TAAAAGAAGAGTCAAACTTA+AGG - chr7_4:54510355-54510374 Msa1163320:intron 25.0%
!!! GTTTCTCTTATACTTTTTGT+AGG + chr7_4:54510668-54510687 None:intergenic 25.0%
! AGATTTAGAGATTAATGAGT+TGG - chr7_4:54510694-54510713 Msa1163320:intron 25.0%
! TTCTATCATAACCCATATTT+CGG + chr7_4:54510721-54510740 None:intergenic 25.0%
! AATATTTCTTGGGATTACAT+GGG + chr7_4:54511314-54511333 None:intergenic 25.0%
! TAATATTTCTTGGGATTACA+TGG + chr7_4:54511315-54511334 None:intergenic 25.0%
!!! TATAAGAAGTATTATGAGGT+GGG + chr7_4:54511493-54511512 None:intergenic 25.0%
!!! CAAGTATAAGAAGTATTATG+AGG + chr7_4:54511497-54511516 None:intergenic 25.0%
! TTCAATGTAATCATATGTGT+CGG - chr7_4:54511591-54511610 Msa1163320:intron 25.0%
! TACTTGAATTATGAGCAAAA+TGG + chr7_4:54511713-54511732 None:intergenic 25.0%
! CGGAAAATATAGAATTATGT+TGG + chr7_4:54511763-54511782 None:intergenic 25.0%
! ATCAACTGTAATAAAGCATA+AGG + chr7_4:54512051-54512070 None:intergenic 25.0%
! TTGTCTCATATGTTAGTAAA+TGG - chr7_4:54512245-54512264 Msa1163320:intron 25.0%
! TCTTGACATATAAATTAGAC+TGG + chr7_4:54512421-54512440 None:intergenic 25.0%
! ATCAATAGATTGAAAGAGAA+CGG - chr7_4:54512545-54512564 Msa1163320:CDS 25.0%
!!! TGAGTGTTGATAAATTTTTG+TGG - chr7_4:54512622-54512641 Msa1163320:CDS 25.0%
! CTTATAACATAATTTACCCT+TGG - chr7_4:54512687-54512706 Msa1163320:exon 25.0%
! TGTGTTACTAATAAAACCTG+AGG - chr7_4:54508074-54508093 Msa1163320:three_prime_UTR 30.0%
!!! GTGAAATTTTCTAAGATCTC+TGG - chr7_4:54508355-54508374 Msa1163320:three_prime_UTR 30.0%
!! GTAAAAGAAGCACTATCATA+AGG - chr7_4:54508565-54508584 Msa1163320:CDS 30.0%
! ATGTGATTGTGTGTATGTTT+TGG - chr7_4:54508615-54508634 Msa1163320:CDS 30.0%
ACATGACAACAACAAAATGT+GGG + chr7_4:54508995-54509014 None:intergenic 30.0%
GACAAAATGTGGGTAAAAAA+AGG + chr7_4:54509153-54509172 None:intergenic 30.0%
CTTAAGACATAGACAAATTG+TGG + chr7_4:54509207-54509226 None:intergenic 30.0%
GAATTAAAACAAAACCATGC+TGG + chr7_4:54509392-54509411 None:intergenic 30.0%
GATGGAATTAATGTTGTTAG+TGG - chr7_4:54509416-54509435 Msa1163320:intron 30.0%
TTTGTTACATGATTCAGCAA+TGG + chr7_4:54509465-54509484 None:intergenic 30.0%
! ACTTTCACTTCTAAAAGAGT+CGG - chr7_4:54509682-54509701 Msa1163320:intron 30.0%
! TGTCACTGTTGATAAATTAC+TGG - chr7_4:54509996-54510015 Msa1163320:intron 30.0%
CTGTTTGGATATATAGCAAT+TGG + chr7_4:54510089-54510108 None:intergenic 30.0%
ATTGCTATATATCCAAACAG+CGG - chr7_4:54510089-54510108 Msa1163320:intron 30.0%
! CCAAATTTTCCAATGCATAT+TGG + chr7_4:54510287-54510306 None:intergenic 30.0%
CCAATATGCATTGGAAAATT+TGG - chr7_4:54510284-54510303 Msa1163320:intron 30.0%
! CATACGGTTTTCTATATTTC+AGG + chr7_4:54510327-54510346 None:intergenic 30.0%
CTAGAATAAAATAAGCGTAG+TGG - chr7_4:54510424-54510443 Msa1163320:intron 30.0%
ATGACAATATTAGAGAGAGT+TGG - chr7_4:54510508-54510527 Msa1163320:intron 30.0%
TGACAATATTAGAGAGAGTT+GGG - chr7_4:54510509-54510528 Msa1163320:intron 30.0%
TACAAATGCAAGTACATGTA+AGG - chr7_4:54511038-54511057 Msa1163320:intron 30.0%
TACACAAAGCAATAACAGAA+AGG + chr7_4:54511098-54511117 None:intergenic 30.0%
! GATTAGTTAATTGCCTGTTT+GGG - chr7_4:54511467-54511486 Msa1163320:CDS 30.0%
!! GTATAAGAAGTATTATGAGG+TGG + chr7_4:54511494-54511513 None:intergenic 30.0%
TAAAGTAGACAACCAACTTA+AGG + chr7_4:54512004-54512023 None:intergenic 30.0%
AATTATCTCCATTCGATATC+CGG + chr7_4:54512110-54512129 None:intergenic 30.0%
AATCACGTGATACTGATATT+AGG - chr7_4:54512179-54512198 Msa1163320:intron 30.0%
CTGAGATGTGAAGATTAATA+TGG - chr7_4:54512473-54512492 Msa1163320:intron 30.0%
TATTGATGTGCGTGTTAAAA+AGG + chr7_4:54512532-54512551 None:intergenic 30.0%
TCAATAGATTGAAAGAGAAC+GGG - chr7_4:54512546-54512565 Msa1163320:CDS 30.0%
AGATATTCCAAATGCTTGAT+TGG - chr7_4:54512655-54512674 Msa1163320:CDS 30.0%
TTCCTTAAAACCTTGAATGG+TGG + chr7_4:54508129-54508148 None:intergenic 35.0%
GAGCAATTTCAACACTTCTT+CGG + chr7_4:54508187-54508206 None:intergenic 35.0%
GAATTGTTTCAAATGCAAGC+AGG + chr7_4:54508862-54508881 None:intergenic 35.0%
TCCAAATAAGATTGAAGCTC+AGG - chr7_4:54508880-54508899 Msa1163320:intron 35.0%
ACCTGAGCTTCAATCTTATT+TGG + chr7_4:54508884-54508903 None:intergenic 35.0%
CACATGACAACAACAAAATG+TGG + chr7_4:54508996-54509015 None:intergenic 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG + chr7_4:54509053-54509072 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG - chr7_4:54509052-54509071 Msa1163320:intron 35.0%
CTCCACTTACAATTTCATTC+TGG - chr7_4:54509313-54509332 Msa1163320:intron 35.0%
GACCAGAATGAAATTGTAAG+TGG + chr7_4:54509318-54509337 None:intergenic 35.0%
TCTGGAAGAAGAGAACATAA+AGG - chr7_4:54509364-54509383 Msa1163320:intron 35.0%
TGTTGTTAGTGGTGATTCTA+TGG - chr7_4:54509427-54509446 Msa1163320:intron 35.0%
TGTAACAAAGTCATTGCTGT+CGG - chr7_4:54509476-54509495 Msa1163320:intron 35.0%
ACCATGTATAAATCTAGGTG+GGG + chr7_4:54509513-54509532 None:intergenic 35.0%
GACCATGTATAAATCTAGGT+GGG + chr7_4:54509514-54509533 None:intergenic 35.0%
AGACCATGTATAAATCTAGG+TGG + chr7_4:54509515-54509534 None:intergenic 35.0%
AGTCAGAAAAGAGAAACCTA+AGG + chr7_4:54509563-54509582 None:intergenic 35.0%
! CAAACAACCTCTTACTCTTT+TGG - chr7_4:54509641-54509660 Msa1163320:intron 35.0%
AAGATGGCTTATGTAAACGT+AGG - chr7_4:54509853-54509872 Msa1163320:intron 35.0%
AGATGGCTTATGTAAACGTA+GGG - chr7_4:54509854-54509873 Msa1163320:intron 35.0%
ATAGTTGCACATGAACATGA+AGG + chr7_4:54509913-54509932 None:intergenic 35.0%
TTGCTATATATCCAAACAGC+GGG - chr7_4:54510090-54510109 Msa1163320:intron 35.0%
! AACTTATGATGGTGAACGAA+AGG - chr7_4:54510115-54510134 Msa1163320:intron 35.0%
GATGGTAAGTTCATTTCATC+TGG - chr7_4:54510142-54510161 Msa1163320:intron 35.0%
!! GTGAAAAGATGGTGGAAAAT+AGG - chr7_4:54510544-54510563 Msa1163320:intron 35.0%
! GACCAGTAGATTTTGTAGTA+AGG - chr7_4:54510595-54510614 Msa1163320:intron 35.0%
CTCCTTACTACAAAATCTAC+TGG + chr7_4:54510600-54510619 None:intergenic 35.0%
TAGTAAGGAGATAGATCAGA+TGG - chr7_4:54510610-54510629 Msa1163320:intron 35.0%
! TAATGAGTTGGACCGAAATA+TGG - chr7_4:54510706-54510725 Msa1163320:intron 35.0%
! AATGAGTTGGACCGAAATAT+GGG - chr7_4:54510707-54510726 Msa1163320:intron 35.0%
TGATTTCACTGCAACGAAAA+GGG + chr7_4:54510848-54510867 None:intergenic 35.0%
ATGATTTCACTGCAACGAAA+AGG + chr7_4:54510849-54510868 None:intergenic 35.0%
ACAGAATTGTGCTTAGAAGA+TGG - chr7_4:54510935-54510954 Msa1163320:intron 35.0%
!!! GTTTTGTAGAGCTTTGAATG+TGG - chr7_4:54511179-54511198 Msa1163320:intron 35.0%
CTTTGAATGTGGATTCTTAC+TGG - chr7_4:54511190-54511209 Msa1163320:intron 35.0%
GATTCTTACTGGAAAGATTC+AGG - chr7_4:54511201-54511220 Msa1163320:intron 35.0%
AGGTAGGAATCTGTTAAGTT+AGG - chr7_4:54511221-54511240 Msa1163320:intron 35.0%
TGTGTGGAAACTGATCAATA+CGG + chr7_4:54511431-54511450 None:intergenic 35.0%
ATTGATCAGTTTCCACACAA+TGG - chr7_4:54511432-54511451 Msa1163320:CDS 35.0%
TTGATCAGTTTCCACACAAT+GGG - chr7_4:54511433-54511452 Msa1163320:CDS 35.0%
! CGATTAGTTAATTGCCTGTT+TGG - chr7_4:54511466-54511485 Msa1163320:CDS 35.0%
TATGAAGCACATATACTCCT+CGG + chr7_4:54511668-54511687 None:intergenic 35.0%
! ATTTTCCGGAACACAATGTT+AGG - chr7_4:54511775-54511794 Msa1163320:intron 35.0%
! TTTTCCGGAACACAATGTTA+GGG - chr7_4:54511776-54511795 Msa1163320:intron 35.0%
TGAAGTGATAAAGAGGTTGA+AGG + chr7_4:54511947-54511966 None:intergenic 35.0%
TAAGGAGTGAAGTGATAAAG+AGG + chr7_4:54511954-54511973 None:intergenic 35.0%
TAGACAACCAACTTAAGGTT+AGG + chr7_4:54511999-54512018 None:intergenic 35.0%
TTAGTAAATGGTGTGAGCTA+GGG - chr7_4:54512257-54512276 Msa1163320:intron 35.0%
TATATCCCTCTAATGGTAAC+AGG + chr7_4:54512316-54512335 None:intergenic 35.0%
TGTGTTGTATATCCCTCTAA+TGG + chr7_4:54512323-54512342 None:intergenic 35.0%
TAGCTGCACTAATAAAATGG+CGG - chr7_4:54512498-54512517 Msa1163320:intron 35.0%
!!! GAGAACGGGTATACTTTTTT+TGG - chr7_4:54512560-54512579 Msa1163320:CDS 35.0%
ACAGTAACCAATCAAGCATT+TGG + chr7_4:54512665-54512684 None:intergenic 35.0%
GCACATTACATTGAACTAGA+AGG - chr7_4:54512738-54512757 Msa1163320:five_prime_UTR 35.0%
AAGTGTTCTGTGATGTGCAT+AGG - chr7_4:54508103-54508122 Msa1163320:three_prime_UTR 40.0%
!! AAGTGTTGAAATTGCTCGTG+AGG - chr7_4:54508190-54508209 Msa1163320:three_prime_UTR 40.0%
TGGGAGTTATGGAGCTTATT+TGG - chr7_4:54508313-54508332 Msa1163320:three_prime_UTR 40.0%
TATGGAGCTTATTTGGCTGA+TGG - chr7_4:54508320-54508339 Msa1163320:three_prime_UTR 40.0%
CCAGAATAACTGATACCAAG+AGG + chr7_4:54508527-54508546 None:intergenic 40.0%
CCTCTTGGTATCAGTTATTC+TGG - chr7_4:54508524-54508543 Msa1163320:CDS 40.0%
TATGCTTCTTGACATGTTCC+TGG - chr7_4:54508746-54508765 Msa1163320:intron 40.0%
!! TCGGAGAAGAGTTCAAGTTT+TGG - chr7_4:54508820-54508839 Msa1163320:intron 40.0%
GTTGTTGTCATGTGACTGTA+AGG - chr7_4:54509002-54509021 Msa1163320:intron 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG - chr7_4:54509046-54509065 Msa1163320:intron 40.0%
CAGCCTCTTGTGTAAAAACA+GGG - chr7_4:54509047-54509066 Msa1163320:intron 40.0%
CGTACAATACACCAAATGGT+GGG - chr7_4:54509078-54509097 Msa1163320:intron 40.0%
!! CATTCTGGTCTTGACTAAAC+AGG - chr7_4:54509328-54509347 Msa1163320:intron 40.0%
AGAACATAAAGGTTCCAGCA+TGG - chr7_4:54509375-54509394 Msa1163320:intron 40.0%
TGTTAGTGGTGATTCTATGG+TGG - chr7_4:54509430-54509449 Msa1163320:intron 40.0%
ACCCCACCTAGATTTATACA+TGG - chr7_4:54509509-54509528 Msa1163320:intron 40.0%
GCTTAAGAAGGTAGAACCTT+AGG - chr7_4:54509544-54509563 Msa1163320:intron 40.0%
! CTCTTTTCTGACTGAATGTG+CGG - chr7_4:54509570-54509589 Msa1163320:intron 40.0%
! TCTTTTCTGACTGAATGTGC+GGG - chr7_4:54509571-54509590 Msa1163320:intron 40.0%
!! TGGCTTGCATTTTATCTGTG+TGG - chr7_4:54510016-54510035 Msa1163320:intron 40.0%
TGCTATATATCCAAACAGCG+GGG - chr7_4:54510091-54510110 Msa1163320:intron 40.0%
TGCATTGGAAAATTTGGCTG+TGG - chr7_4:54510290-54510309 Msa1163320:intron 40.0%
GCATTGGAAAATTTGGCTGT+GGG - chr7_4:54510291-54510310 Msa1163320:intron 40.0%
TATCCAACACTCTGTTACAC+GGG + chr7_4:54510391-54510410 None:intergenic 40.0%
CTATCCAACACTCTGTTACA+CGG + chr7_4:54510392-54510411 None:intergenic 40.0%
! AAATAAGCGTAGTGGAGATG+AGG - chr7_4:54510432-54510451 Msa1163320:intron 40.0%
! TGGAGATGAGGATCTTTTGT+TGG - chr7_4:54510444-54510463 Msa1163320:intron 40.0%
! AGGATCTTTTGTTGGATGTC+TGG - chr7_4:54510452-54510471 Msa1163320:intron 40.0%
GATGTCTGGTAAGACTAGAT+GGG - chr7_4:54510466-54510485 Msa1163320:intron 40.0%
! TTCCACCATCTTTTCACTAG+CGG + chr7_4:54510541-54510560 None:intergenic 40.0%
!! AGATGGTGGAAAATAGGCTT+AGG - chr7_4:54510550-54510569 Msa1163320:intron 40.0%
GAAAATAGGCTTAGGTGGTT+TGG - chr7_4:54510558-54510577 Msa1163320:intron 40.0%
TAAGGAGATAGATCAGATGG+AGG - chr7_4:54510613-54510632 Msa1163320:intron 40.0%
GAGGATAGTCAGATCTTTAG+AGG - chr7_4:54510632-54510651 Msa1163320:intron 40.0%
TAAGACTTGTCCCACTAAGT+GGG + chr7_4:54510776-54510795 None:intergenic 40.0%
CTTACTGGAAAGATTCAGGT+AGG - chr7_4:54511205-54511224 Msa1163320:intron 40.0%
TTCTGCATTTCGTGTAGTTC+TGG + chr7_4:54511249-54511268 None:intergenic 40.0%
TCAGTCAGAACCTTAGCTTA+GGG + chr7_4:54511362-54511381 None:intergenic 40.0%
TTCAGTCAGAACCTTAGCTT+AGG + chr7_4:54511363-54511382 None:intergenic 40.0%
GTGTGGAAACTGATCAATAC+GGG + chr7_4:54511430-54511449 None:intergenic 40.0%
CAGGCAATTAACTAATCGCT+TGG + chr7_4:54511464-54511483 None:intergenic 40.0%
TGAGTTATGAAGCACAGACT+CGG - chr7_4:54511517-54511536 Msa1163320:intron 40.0%
!! GACTCGATAAGTATTGACAC+CGG - chr7_4:54511630-54511649 Msa1163320:intron 40.0%
!! ACTCGATAAGTATTGACACC+GGG - chr7_4:54511631-54511650 Msa1163320:intron 40.0%
TGAGACAATGATCGAACCTA+CGG - chr7_4:54511821-54511840 Msa1163320:intron 40.0%
ACCAACTTAAGGTTAGGTCA+CGG + chr7_4:54511993-54512012 None:intergenic 40.0%
TTCTCGTTGCAGCAAAATAC+AGG - chr7_4:54512205-54512224 Msa1163320:intron 40.0%
GTTAGTAAATGGTGTGAGCT+AGG - chr7_4:54512256-54512275 Msa1163320:intron 40.0%
TAGTAAATGGTGTGAGCTAG+GGG - chr7_4:54512258-54512277 Msa1163320:intron 40.0%
TGATTGCCCTGTATTCAGAA+AGG - chr7_4:54512379-54512398 Msa1163320:intron 40.0%
TTGCCTCCTTTCTGAATACA+GGG + chr7_4:54512388-54512407 None:intergenic 40.0%
TTTGCCTCCTTTCTGAATAC+AGG + chr7_4:54512389-54512408 None:intergenic 40.0%
ATTCAGAAAGGAGGCAAATG+CGG - chr7_4:54512391-54512410 Msa1163320:intron 40.0%
TATGTCAAGAATGCCTGCAA+TGG - chr7_4:54512431-54512450 Msa1163320:intron 40.0%
ATGTCAAGAATGCCTGCAAT+GGG - chr7_4:54512432-54512451 Msa1163320:intron 40.0%
GCCTAGCTGCACTAATAAAA+TGG - chr7_4:54512495-54512514 Msa1163320:intron 40.0%
!! GCCATTTTATTAGTGCAGCT+AGG + chr7_4:54512499-54512518 None:intergenic 40.0%
! GGCCACCATTCAAGGTTTTA+AGG - chr7_4:54508124-54508143 Msa1163320:three_prime_UTR 45.0%
! TCAAGATAGGGCGTTTCTTG+AGG + chr7_4:54508280-54508299 None:intergenic 45.0%
CTGACGCTGCAATCAAGATA+GGG + chr7_4:54508292-54508311 None:intergenic 45.0%
ACTGACGCTGCAATCAAGAT+AGG + chr7_4:54508293-54508312 None:intergenic 45.0%
ATCTTGATTGCAGCGTCAGT+TGG - chr7_4:54508293-54508312 Msa1163320:three_prime_UTR 45.0%
TCTTGATTGCAGCGTCAGTT+GGG - chr7_4:54508294-54508313 Msa1163320:three_prime_UTR 45.0%
CAAGAGGCTAAACACAACCT+TGG + chr7_4:54508511-54508530 None:intergenic 45.0%
CAAGGTTGTGTTTAGCCTCT+TGG - chr7_4:54508509-54508528 Msa1163320:CDS 45.0%
!! GTTCAAGTTTTGGCAGATGC+AGG - chr7_4:54508830-54508849 Msa1163320:intron 45.0%
GTCATGTGACTGTAAGGTCA+CGG - chr7_4:54509008-54509027 Msa1163320:intron 45.0%
TCATGTGACTGTAAGGTCAC+GGG - chr7_4:54509009-54509028 Msa1163320:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr7_4:54509042-54509061 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr7_4:54509074-54509093 Msa1163320:intron 45.0%
GCGTACAATACACCAAATGG+TGG - chr7_4:54509077-54509096 Msa1163320:intron 45.0%
TGGGTAAAAAAAGGGCAACC+CGG + chr7_4:54509144-54509163 None:intergenic 45.0%
! ACAGGCTTTTGCAGAACTTC+TGG - chr7_4:54509346-54509365 Msa1163320:intron 45.0%
! GGTGATTCTATGGTGGAATG+TGG - chr7_4:54509437-54509456 Msa1163320:intron 45.0%
TCATAAGTTTCCCCGCTGTT+TGG + chr7_4:54510104-54510123 None:intergenic 45.0%
AACAGCGGGGAAACTTATGA+TGG - chr7_4:54510104-54510123 Msa1163320:intron 45.0%
! ATGATGGTGAACGAAAGGAG+TGG - chr7_4:54510120-54510139 Msa1163320:intron 45.0%
TAACCCGTGTAACAGAGTGT+TGG - chr7_4:54510385-54510404 Msa1163320:intron 45.0%
GGATGTCTGGTAAGACTAGA+TGG - chr7_4:54510465-54510484 Msa1163320:intron 45.0%
CTGGTAAGACTAGATGGGAT+AGG - chr7_4:54510471-54510490 Msa1163320:intron 45.0%
TAGCACCGCTAGTGAAAAGA+TGG - chr7_4:54510533-54510552 Msa1163320:intron 45.0%
TGGTGGAAAATAGGCTTAGG+TGG - chr7_4:54510553-54510572 Msa1163320:intron 45.0%
AAGACTTGTCCCACTAAGTG+GGG + chr7_4:54510775-54510794 None:intergenic 45.0%
CTAAGACTTGTCCCACTAAG+TGG + chr7_4:54510777-54510796 None:intergenic 45.0%
ACGAAAAGGGATGAGCATAG+TGG + chr7_4:54510835-54510854 None:intergenic 45.0%
AAAAAGTTGACGCCAAGAGC+AGG - chr7_4:54511067-54511086 Msa1163320:intron 45.0%
TCAGAACCTTAGCTTAGGGT+TGG + chr7_4:54511358-54511377 None:intergenic 45.0%
ACTGATCAATACGGGTGGTT+TGG + chr7_4:54511422-54511441 None:intergenic 45.0%
TGGAAACTGATCAATACGGG+TGG + chr7_4:54511427-54511446 None:intergenic 45.0%
! TCATATGTGTCGGTCTCATG+TGG - chr7_4:54511601-54511620 Msa1163320:intron 45.0%
! CATATGTGTCGGTCTCATGT+GGG - chr7_4:54511602-54511621 Msa1163320:intron 45.0%
GCACATATACTCCTCGGATT+AGG + chr7_4:54511662-54511681 None:intergenic 45.0%
CACTCCCTAACATTGTGTTC+CGG + chr7_4:54511783-54511802 None:intergenic 45.0%
GAGACAATGATCGAACCTAC+GGG - chr7_4:54511822-54511841 Msa1163320:intron 45.0%
AGACAATGATCGAACCTACG+GGG - chr7_4:54511823-54511842 Msa1163320:intron 45.0%
ACCGTGACCTAACCTTAAGT+TGG - chr7_4:54511989-54512008 Msa1163320:CDS 45.0%
! TGTGCTGATCTTTGAGAGAC+CGG - chr7_4:54512088-54512107 Msa1163320:intron 45.0%
TTGAGAGACCGGATATCGAA+TGG - chr7_4:54512099-54512118 Msa1163320:intron 45.0%
TTCTACAGCATCCACCTACA+AGG + chr7_4:54512288-54512307 None:intergenic 45.0%
ACGACTCCTGTTACCATTAG+AGG - chr7_4:54512307-54512326 Msa1163320:intron 45.0%
CGACTCCTGTTACCATTAGA+GGG - chr7_4:54512308-54512327 Msa1163320:intron 45.0%
AATACAGGGCAATCACTGTG+TGG + chr7_4:54512374-54512393 None:intergenic 45.0%
TTGCCCTGTATTCAGAAAGG+AGG - chr7_4:54512382-54512401 Msa1163320:intron 45.0%
CTTCACATCTCAGCACAAAG+TGG + chr7_4:54512466-54512485 None:intergenic 45.0%
GTGCACAAACTGAGATTCTC+AGG + chr7_4:54512722-54512741 None:intergenic 45.0%
CAGAACACTTCTTCAGCCTC+AGG + chr7_4:54508093-54508112 None:intergenic 50.0%
TGTGCATAGGCCACCATTCA+AGG - chr7_4:54508116-54508135 Msa1163320:three_prime_UTR 50.0%
ACGATGTGCTGCGTGTTCTT+CGG - chr7_4:54508232-54508251 Msa1163320:three_prime_UTR 50.0%
! TGGCTGATGGATCAGAGTAC+AGG - chr7_4:54508333-54508352 Msa1163320:three_prime_UTR 50.0%
TCTTGACATGTTCCTGGCAG+TGG - chr7_4:54508752-54508771 Msa1163320:intron 50.0%
CTTGACATGTTCCTGGCAGT+GGG - chr7_4:54508753-54508772 Msa1163320:intron 50.0%
GTTCCTGGCAGTGGGAATTA+TGG - chr7_4:54508761-54508780 Msa1163320:intron 50.0%
TCACCATAATTCCCACTGCC+AGG + chr7_4:54508767-54508786 None:intergenic 50.0%
TTTCCAACGAGGATGCAGCT+TGG + chr7_4:54509719-54509738 None:intergenic 50.0%
TGGTGAACGAAAGGAGTGGA+TGG - chr7_4:54510124-54510143 Msa1163320:intron 50.0%
CACCGCTAGTGAAAAGATGG+TGG - chr7_4:54510536-54510555 Msa1163320:intron 50.0%
ACTAAGTGGGGTCAGCTAGA+TGG + chr7_4:54510763-54510782 None:intergenic 50.0%
ATCTAGCTGACCCCACTTAG+TGG - chr7_4:54510762-54510781 Msa1163320:CDS 50.0%
TCTAGCTGACCCCACTTAGT+GGG - chr7_4:54510763-54510782 Msa1163320:CDS 50.0%
AGAAAGGCAGATCCTGCTCT+TGG + chr7_4:54511082-54511101 None:intergenic 50.0%
! AACTAGCACTGAGCCGAATG+AGG + chr7_4:54511162-54511181 None:intergenic 50.0%
CTTAGCTTAGGGTTGGACAG+AGG + chr7_4:54511351-54511370 None:intergenic 50.0%
CTCTGTCCAACCCTAAGCTA+AGG - chr7_4:54511349-54511368 Msa1163320:CDS 50.0%
!! TGGTTTGGTGTGTGTTTGGG+GGG + chr7_4:54511407-54511426 None:intergenic 50.0%
!! GTGGTTTGGTGTGTGTTTGG+GGG + chr7_4:54511408-54511427 None:intergenic 50.0%
!! GGTGGTTTGGTGTGTGTTTG+GGG + chr7_4:54511409-54511428 None:intergenic 50.0%
!! GGGTGGTTTGGTGTGTGTTT+GGG + chr7_4:54511410-54511429 None:intergenic 50.0%
! CAGTTTCCACACAATGGGCT+TGG - chr7_4:54511438-54511457 Msa1163320:CDS 50.0%
ATTATGAGGTGGGCCCAAAC+AGG + chr7_4:54511483-54511502 None:intergenic 50.0%
CACAGACTCGGATACAGACA+TGG - chr7_4:54511529-54511548 Msa1163320:intron 50.0%
TTGTGCATTCATGTCCCCGT+AGG + chr7_4:54511840-54511859 None:intergenic 50.0%
GGTCACGCACAGAGGATATA+AGG + chr7_4:54511972-54511991 None:intergenic 50.0%
TCTCAGGTCACTAGCTCCAA+GGG + chr7_4:54512706-54512725 None:intergenic 50.0%
TTCTCAGGTCACTAGCTCCA+AGG + chr7_4:54512707-54512726 None:intergenic 50.0%
CGATGTGCTGCGTGTTCTTC+GGG - chr7_4:54508233-54508252 Msa1163320:three_prime_UTR 55.0%
GCAGCGTCAGTTGGGAGTTA+TGG - chr7_4:54508302-54508321 Msa1163320:three_prime_UTR 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr7_4:54509021-54509040 Msa1163320:intron 55.0%
TTGCCAAGCTGCATCCTCGT+TGG - chr7_4:54509713-54509732 Msa1163320:intron 55.0%
!! GGTTTGGTGTGTGTTTGGGG+GGG + chr7_4:54511406-54511425 None:intergenic 55.0%
!! CGGGTGGTTTGGTGTGTGTT+TGG + chr7_4:54511411-54511430 None:intergenic 55.0%
TGTCGGTCTCATGTGGGTGT+TGG - chr7_4:54511608-54511627 Msa1163320:intron 55.0%
GTGGCAACATGACCCATTGC+AGG + chr7_4:54512447-54512466 None:intergenic 55.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr7_4:54509090-54509109 Msa1163320:intron 60.0%
CTGAAGCTCCCGCATACGCA+GGG + chr7_4:54509117-54509136 None:intergenic 60.0%
ACTGAAGCTCCCGCATACGC+AGG + chr7_4:54509118-54509137 None:intergenic 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG - chr7_4:54509122-54509141 Msa1163320:intron 60.0%
TTGGTGTGTGTTTGGGGGGG+AGG + chr7_4:54511403-54511422 None:intergenic 60.0%
GCTTGGCCAAGCCCATTGTG+TGG + chr7_4:54511447-54511466 None:intergenic 60.0%
! TCCTCGGATTAGGCGTGTCC+CGG + chr7_4:54511652-54511671 None:intergenic 60.0%
TAGGTCACGGTCACGCACAG+AGG + chr7_4:54511980-54511999 None:intergenic 60.0%
GAGCTAGGGGCTTGCCTTGT+AGG - chr7_4:54512271-54512290 Msa1163320:intron 60.0%
CTAGGGGCTTGCCTTGTAGG+TGG - chr7_4:54512274-54512293 Msa1163320:intron 60.0%
CGGGAAGGGGTCCCACCATT+TGG + chr7_4:54509092-54509111 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG + chr7_4:54509105-54509124 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG + chr7_4:54509106-54509125 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG - chr7_4:54509105-54509124 Msa1163320:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG - chr7_4:54509106-54509125 Msa1163320:intron 65.0%
TGCGGGAGCTTCAGTGCACC+GGG - chr7_4:54509123-54509142 Msa1163320:intron 65.0%
ACCGGGACACGCCTAATCCG+AGG - chr7_4:54511648-54511667 Msa1163320:intron 65.0%
CGCATACGCAGGGTCCGGGA+AGG + chr7_4:54509107-54509126 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG + chr7_4:54509111-54509130 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG + chr7_4:54509112-54509131 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 54508047 54512821 54508047 ID=Msa1163320;Name=Msa1163320
chr7_4 mRNA 54508047 54512821 54508047 ID=Msa1163320-mRNA-1;Parent=Msa1163320;Name=Msa1163320-mRNA-1;_AED=0.02;_eAED=0.02;_QI=132|1|1|1|1|1|5|440|248
chr7_4 exon 54508047 54508651 54508047 ID=Msa1163320-mRNA-1:exon:15870;Parent=Msa1163320-mRNA-1
chr7_4 exon 54510723 54510794 54510723 ID=Msa1163320-mRNA-1:exon:15869;Parent=Msa1163320-mRNA-1
chr7_4 exon 54511315 54511518 54511315 ID=Msa1163320-mRNA-1:exon:15868;Parent=Msa1163320-mRNA-1
chr7_4 exon 54511967 54512096 54511967 ID=Msa1163320-mRNA-1:exon:15867;Parent=Msa1163320-mRNA-1
chr7_4 exon 54512514 54512821 54512514 ID=Msa1163320-mRNA-1:exon:15866;Parent=Msa1163320-mRNA-1
chr7_4 five_prime_UTR 54512690 54512821 54512690 ID=Msa1163320-mRNA-1:five_prime_utr;Parent=Msa1163320-mRNA-1
chr7_4 CDS 54512514 54512689 54512514 ID=Msa1163320-mRNA-1:cds;Parent=Msa1163320-mRNA-1
chr7_4 CDS 54511967 54512096 54511967 ID=Msa1163320-mRNA-1:cds;Parent=Msa1163320-mRNA-1
chr7_4 CDS 54511315 54511518 54511315 ID=Msa1163320-mRNA-1:cds;Parent=Msa1163320-mRNA-1
chr7_4 CDS 54510723 54510794 54510723 ID=Msa1163320-mRNA-1:cds;Parent=Msa1163320-mRNA-1
chr7_4 CDS 54508487 54508651 54508487 ID=Msa1163320-mRNA-1:cds;Parent=Msa1163320-mRNA-1
chr7_4 three_prime_UTR 54508047 54508486 54508047 ID=Msa1163320-mRNA-1:three_prime_utr;Parent=Msa1163320-mRNA-1
Gene Sequence

>Msa1163320

ATGCTCCGAAGAAGTGTTGAAATTGCTCGTGAGGCTCGCGATTTGTATTATGAACGATGTGCTGCGTGTTCTTCGGGTAGTGATGCTGATGATAGAATCCTCAAGAAACGCCCTATCTTGATTGCAGCGTCAGTTGGGAGTTATGGAGCTTATTTGGCTGATGGATCAGAGTACAGTGGGAATTATGGTGATGCTATCACATTGAAAACTCTCAAAGATTTTCATCGGAGAAGAGTTCAAGTTTTGGCAGATGCAGGTGCAGACCTGCTTGCATTTGAAACAATTCCAAATAAGATTGAAGCTCAGGCTTTTGCAGAACTTCTGGAAGAAGAGAACATAAAGGTTCCAGCATGGTTTTGTTTTAATTCTAAGGATGGAATTAATGTTGTTAGTGGTGATTCTATGGTGGAATGTGGCTCCATTGCTGAATCATGTAACAAAGTCATTGCTGTCGGAATCAACTGTACCCCACCTAGATTTATACATGGTCTTATACTTTTGCTTAAGAAGGTGACTACAAAACCAATTGCTATATATCCAAACAGCGGGGAAACTTATGATGGTGAACGAAAGGAGTGGATGCAAAATACAGGTGTTACAGATAAAGATTTTGTCTCATATGTTAGTAAATGGTGTGAGCTAGGGGCTTGCCTTGTAGGTGGATGCTGTAGAACGACTCCTGTTACCATTAGAGGGATATACAACACACTATACAGCAATCAATCTGCTACTCTTTCCACACAGTGA
Protein sequence

>Msa1163320

MLRRSVEIAREARDLYYERCAACSSGSDADDRILKKRPILIAASVGSYGAYLADGSEYSGNYGDAITLKTLKDFHRRRVQVLADAGADLLAFETIPNKIEAQAFAELLEEENIKVPAWFCFNSKDGINVVSGDSMVECGSIAESCNKVIAVGINCTPPRFIHGLILLLKKVTTKPIAIYPNSGETYDGERKEWMQNTGVTDKDFVSYVSKWCELGACLVGGCCRTTPVTIRGIYNTLYSNQSATLSTQ*